Prupe.7G169500_v2.0.a1

Thaumatin-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0003319
Physical Location & Seq
Forward (+)
17204080 .. 17206731
2652 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G169500.1

Sequence Viewer

Length: 921 bp
ATGGGTGCTCAATTTTCGTATTGCATCACTCTCCTCCTCCTCATCATTGCCAAAGGGGTCACCGGAGCCACATTCACATTCACAAACAAGTGTGACTTCACAGTATGGCCAGGAATTCTAGCCAGCGCCGGCACCCCTAAGCTGGACAGCACCGGCTTCGAGCTCGCCAAAGGCAGCACCCGCTCCTTCCAAGCCCCGACAGGATGGTCCGGCCGCTTCTGGGGCCGAACCGGCTGCAACTTCGACGGTTCGGGCCACGGCTCATGTTCGACTGGCGACTGCGGTTCGGGCCAGCTCGAGTGCAACGGAGCCGGAGCTGCACCGCCAGCCACTCTGGCCGAGTTCACACTCGGCTCGGGTTCTCAAGACTTCTATGACGTCAGCCTGGTTGACGGTTATAACTTACCTATGATCGTTGAAGGGAGCGGGGGATCCGGTACGTGCGCGTCCACGGGCTGCGCTACGGACCTCAACCGTCGGTGCCCCGCCGAGCTCAAAGTCGACGGCGGCGGCGCGTGCAAGAGCGCATGCGACGCGTTTGGGAGCCCGGAGTACTGTTGCAACGGCGATTATGGGTCACCGTCCACGTGTAAGCCGTCCATGTACTCGCAGCTGTTTAAGTCCGCGTGCCCCAAATCGTACAGCTACGCTTACGACGATGCATCCAGTACGTTTACGTGTACGGGTGCTGACTATACGATCACATTTTGCGCTTCTCTTCTTCCAAGTGTAAAATCCGCAACAGATTCCTCTTCACAAACAACTGATGGTTCAGGGTCGGATTCCGGGTCGGACTTACTGGCCTCATCGTTGCTTGCAGATTTGGCCGCAGGGGATTCAACAAGAACCCAACCTTCCATGGCTCTCCTAAGCATGTTGGTTTTGGTCATCTCTTTGGCCCTCTCATTTTCACAGTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Thaumatin

Protein Analysis

307

Amino Acids

31.25

Weight (kDa)

4.43

Isoelectric Point (pI)

38.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 399
AasI GACNNNNNNGTC 1 cut(s) 205
AatII GACGTC 1 cut(s) 381
AccB1I GGYRCC 2 cut(s) 131, 480
AccBSI CCGCTC 2 cut(s) 183, 426
AccI GTMKAC 1 cut(s) 501
AccII CGCG 4 cut(s) 446, 515, 536, 626
AclWI GGATC 2 cut(s) 426, 439
AcoI YGGCCR 4 cut(s) 107, 211, 336, 825
AcsI RAATTY 1 cut(s) 114
AcvI CACGTG 1 cut(s) 588
AcyI GRCGYC 1 cut(s) 378
AfaI GTAC 6 cut(s) 439, 554, 605, 641, 670, 682
AfiI CCNNNNNNNGG 2 cut(s) 142, 220
AflIII ACRYGT 3 cut(s) 534, 587, 677
AgsI TTSAA 2 cut(s) 419, 840
AjnI CCWGG 2 cut(s) 109, 384
AluBI AGCT 7 cut(s) 142, 163, 295, 317, 493, 613, 645
AluI AGCT 7 cut(s) 142, 163, 295, 317, 493, 613, 645
Alw21I GWGCWC 3 cut(s) 10, 165, 495
AlwI GGATC 2 cut(s) 426, 439
Ama87I CYCGRG 2 cut(s) 296, 355
AoxI GGCC 9 cut(s) 107, 211, 223, 253, 289, 336, 801, 825, 897
ApeKI GCWGC 5 cut(s) 174, 234, 317, 456, 610
ApoI RAATTY 1 cut(s) 114
AspLEI GCGC 6 cut(s) 128, 446, 461, 515, 527, 713
AspS9I GGNCC 6 cut(s) 207, 223, 253, 289, 466, 898
AsuC2I CCSGG 2 cut(s) 548, 787
AsuHPI GGTGA 2 cut(s) 52, 570
AvaI CYCGRG 2 cut(s) 296, 355
AvaII GGWCC 2 cut(s) 207, 466
BaeGI GKGCMC 2 cut(s) 485, 632
BalI TGGCCA 1 cut(s) 109
BamHI GGATCC 1 cut(s) 431
BanI GGYRCC 2 cut(s) 131, 480
BanII GRGCYC 3 cut(s) 165, 495, 548
BbrPI CACGTG 1 cut(s) 588
Bbv12I GWGCWC 3 cut(s) 10, 165, 495
BbvI GCAGC 5 cut(s) 186, 221, 304, 443, 622
BccI CCATC 2 cut(s) 198, 761
BceAI ACGGC 4 cut(s) 274, 520, 580, 580
BcgI CGANNNNNNTGC 4 cut(s) 139, 173, 216, 250
BciT130I CCWGG 2 cut(s) 111, 386
BcnI CCSGG 2 cut(s) 548, 787
BfaI CTAG 1 cut(s) 119
BfoI RGCGCY 1 cut(s) 129
BglI GCCNNNNNGGC 2 cut(s) 231, 335
BisI GCNGC 9 cut(s) 175, 214, 235, 318, 457, 508, 511, 611, 828
BlsI GCNGC 9 cut(s) 176, 215, 236, 319, 458, 509, 512, 612, 829
BmcAI AGTACT 1 cut(s) 554
Bme1390I CCNGG 4 cut(s) 111, 386, 548, 787
Bme18I GGWCC 2 cut(s) 207, 466
BmeT110I CYCGRG 2 cut(s) 296, 355
BmgT120I GGNCC 6 cut(s) 207, 223, 253, 289, 466, 898
BmiI GGNNCC 7 cut(s) 67, 133, 224, 310, 433, 482, 545
BmrFI CCNGG 4 cut(s) 111, 386, 548, 787
BmsI GCATC 3 cut(s) 33, 649, 671
Bpu10I CCTNAGC 2 cut(s) 138, 869
BpuEI CTTGAG 1 cut(s) 348
BpuMI CCSGG 2 cut(s) 548, 787
BsaAI YACGTR 3 cut(s) 441, 588, 678
BsaHI GRCGYC 1 cut(s) 378
BsaJI CCNNGG 3 cut(s) 256, 450, 858
BsaWI WCCGGW 2 cut(s) 62, 434
Bsc4I CCNNNNNNNGG 2 cut(s) 142, 220
Bse118I RCCGGY 3 cut(s) 128, 152, 230
Bse1I ACTGG 3 cut(s) 277, 666, 804
Bse3DI GCAATG 1 cut(s) 45
BseBI CCWGG 2 cut(s) 111, 386
BseDI CCNNGG 3 cut(s) 256, 450, 858
BseGI GGATG 2 cut(s) 209, 662
BseLI CCNNNNNNNGG 2 cut(s) 142, 220
BseMI GCAATG 1 cut(s) 45
BseNI ACTGG 3 cut(s) 277, 666, 804
BseRI GAGGAG 3 cut(s) 23, 26, 29
BseSI GKGCMC 2 cut(s) 485, 632
BseX3I CGGCCG 1 cut(s) 211
BseXI GCAGC 5 cut(s) 186, 221, 304, 443, 622
BsgI GTGCAG 1 cut(s) 303
Bsh1236I CGCG 4 cut(s) 446, 515, 536, 626
Bsh1285I CGRYCG 1 cut(s) 214
BshFI GGCC 9 cut(s) 109, 213, 225, 255, 291, 338, 803, 827, 899
BshNI GGYRCC 2 cut(s) 131, 480
BsiEI CGRYCG 1 cut(s) 214
BsiHKAI GWGCWC 3 cut(s) 10, 165, 495
BsiHKCI CYCGRG 2 cut(s) 296, 355
BsiSI CCGG 9 cut(s) 63, 129, 153, 210, 231, 312, 435, 548, 786
BslI CCNNNNNNNGG 2 cut(s) 142, 220
BsnI GGCC 9 cut(s) 109, 213, 225, 255, 291, 338, 803, 827, 899
BsoBI CYCGRG 2 cut(s) 296, 355
Bsp1286I GDGCHC 6 cut(s) 10, 165, 485, 495, 548, 632
Bsp143I GATC 3 cut(s) 411, 431, 699
Bsp19I CCATGG 1 cut(s) 858
BspANI GGCC 9 cut(s) 109, 213, 225, 255, 291, 338, 803, 827, 899
BspFNI CGCG 4 cut(s) 446, 515, 536, 626
BspLI GGNNCC 7 cut(s) 67, 133, 224, 310, 433, 482, 545
BspPI GGATC 2 cut(s) 426, 439
BspT107I GGYRCC 2 cut(s) 131, 480
BsrBI CCGCTC 2 cut(s) 183, 426
BsrDI GCAATG 1 cut(s) 45
BsrFI RCCGGY 3 cut(s) 128, 152, 230
BsrI ACTGG 3 cut(s) 277, 666, 804
BssAI RCCGGY 3 cut(s) 128, 152, 230
BssECI CCNNGG 3 cut(s) 256, 450, 858
BssMI GATC 3 cut(s) 411, 431, 699
BssNI GRCGYC 1 cut(s) 378
BssT1I CCWWGG 1 cut(s) 858
Bst2UI CCWGG 2 cut(s) 111, 386
Bst4CI ACNGT 7 cut(s) 103, 248, 395, 476, 557, 582, 915
Bst6I CTCTTC 2 cut(s) 723, 757
BstACI GRCGYC 1 cut(s) 378
BstBAI YACGTR 3 cut(s) 441, 588, 678
BstC8I GCNNGC 9 cut(s) 124, 130, 165, 293, 327, 517, 529, 628, 816
BstDEI CTNAG 2 cut(s) 138, 869
BstDSI CCRYGG 3 cut(s) 256, 450, 858
BstEII GGTNACC 2 cut(s) 58, 576
BstF5I GGATG 2 cut(s) 209, 662
BstFNI CGCG 4 cut(s) 446, 515, 536, 626
BstH2I RGCGCY 1 cut(s) 129
BstHHI GCGC 6 cut(s) 128, 446, 461, 515, 527, 713
BstKTI GATC 3 cut(s) 414, 434, 702
BstMBI GATC 3 cut(s) 411, 431, 699
BstMCI CGRYCG 1 cut(s) 214
BstNI CCWGG 2 cut(s) 111, 386
BstNSI RCATGY 2 cut(s) 531, 877
BstPI GGTNACC 2 cut(s) 58, 576
BstSCI CCNGG 4 cut(s) 109, 384, 546, 785
BstSLI GKGCMC 2 cut(s) 485, 632
BstUI CGCG 4 cut(s) 446, 515, 536, 626
BstV1I GCAGC 5 cut(s) 186, 221, 304, 443, 622
BstX2I RGATCY 1 cut(s) 431
BstYI RGATCY 1 cut(s) 431
BstZI CGGCCG 1 cut(s) 211
BsuRI GGCC 9 cut(s) 109, 213, 225, 255, 291, 338, 803, 827, 899
BtgI CCRYGG 3 cut(s) 256, 450, 858
BtsCI GGATG 2 cut(s) 209, 662
Cac8I GCNNGC 9 cut(s) 124, 130, 165, 293, 327, 517, 529, 628, 816
CfoI GCGC 6 cut(s) 128, 446, 461, 515, 527, 713
Cfr10I RCCGGY 3 cut(s) 128, 152, 230
Cfr13I GGNCC 6 cut(s) 207, 223, 253, 289, 466, 898
CseI GACGC 2 cut(s) 435, 542
Csp6I GTAC 6 cut(s) 438, 553, 604, 640, 669, 681
CviAII CATG 5 cut(s) 264, 528, 601, 859, 874
CviQI GTAC 6 cut(s) 438, 553, 604, 640, 669, 681
DdeI CTNAG 2 cut(s) 138, 869
DpnI GATC 3 cut(s) 413, 433, 701
DpnII GATC 3 cut(s) 411, 431, 699
DrdI GACNNNNNNGTC 1 cut(s) 205
DseDI GACNNNNNNGTC 1 cut(s) 205
EaeI YGGCCR 4 cut(s) 107, 211, 336, 825
EagI CGGCCG 1 cut(s) 211
Eam1104I CTCTTC 2 cut(s) 723, 757
EarI CTCTTC 2 cut(s) 723, 757
Ecl136II GAGCTC 2 cut(s) 163, 493
EclXI CGGCCG 1 cut(s) 211
Eco130I CCWWGG 1 cut(s) 858
Eco24I GRGCYC 3 cut(s) 165, 495, 548
Eco47I GGWCC 2 cut(s) 207, 466
Eco52I CGGCCG 1 cut(s) 211
Eco53kI GAGCTC 2 cut(s) 163, 493
Eco72I CACGTG 1 cut(s) 588
Eco88I CYCGRG 2 cut(s) 296, 355
Eco91I GGTNACC 2 cut(s) 58, 576
EcoICRI GAGCTC 2 cut(s) 163, 493
EcoO65I GGTNACC 2 cut(s) 58, 576
EcoRI GAATTC 1 cut(s) 114
EcoRII CCWGG 2 cut(s) 109, 384
EcoT14I CCWWGG 1 cut(s) 858
EcoT22I ATGCAT 1 cut(s) 664
EcoT38I GRGCYC 3 cut(s) 165, 495, 548
ErhI CCWWGG 1 cut(s) 858
FaeI CATG 5 cut(s) 267, 531, 604, 862, 877
FalI AAGNNNNNCTT 2 cut(s) 80, 112
FatI CATG 5 cut(s) 263, 527, 600, 858, 873
FauI CCCGC 3 cut(s) 188, 419, 493
FblI GTMKAC 1 cut(s) 501
Fnu4HI GCNGC 9 cut(s) 175, 214, 235, 318, 457, 508, 511, 611, 828
FokI GGATG 2 cut(s) 216, 649
FriOI GRGCYC 3 cut(s) 165, 495, 548
Fsp4HI GCNGC 9 cut(s) 175, 214, 235, 318, 457, 508, 511, 611, 828
FspBI CTAG 1 cut(s) 119
GlaI GCGC 6 cut(s) 127, 445, 460, 514, 526, 712
GluI GCNGC 9 cut(s) 175, 214, 235, 318, 457, 508, 511, 611, 828
HaeII RGCGCY 1 cut(s) 129
HaeIII GGCC 9 cut(s) 109, 213, 225, 255, 291, 338, 803, 827, 899
HapII CCGG 9 cut(s) 63, 129, 153, 210, 231, 312, 435, 548, 786
HgaI GACGC 2 cut(s) 435, 542
HhaI GCGC 6 cut(s) 128, 446, 461, 515, 527, 713
Hin1I GRCGYC 1 cut(s) 378
Hin1II CATG 5 cut(s) 267, 531, 604, 862, 877
Hin6I GCGC 6 cut(s) 126, 444, 459, 513, 525, 711
HinP1I GCGC 6 cut(s) 126, 444, 459, 513, 525, 711
HincII GTYRAC 2 cut(s) 391, 502
HindII GTYRAC 2 cut(s) 391, 502
HinfI GANTC 3 cut(s) 746, 782, 836
HpaII CCGG 9 cut(s) 63, 129, 153, 210, 231, 312, 435, 548, 786
HphI GGTGA 2 cut(s) 52, 570
Hpy166II GTNNAC 7 cut(s) 345, 391, 450, 502, 585, 675, 681
Hpy188I TCNGA 2 cut(s) 781, 793
Hpy188III TCNNGA 1 cut(s) 365
Hpy8I GTNNAC 7 cut(s) 345, 391, 450, 502, 585, 675, 681
Hpy99I CGWCG 5 cut(s) 248, 480, 506, 536, 659
HpyAV CCTTC 3 cut(s) 196, 413, 864
HpyCH4III ACNGT 7 cut(s) 103, 248, 395, 476, 557, 582, 915
HpyCH4IV ACGT 5 cut(s) 378, 440, 587, 671, 677
HpyCH4V TGCA 8 cut(s) 24, 237, 303, 320, 519, 561, 662, 818
HpyF3I CTNAG 2 cut(s) 138, 869
HpySE526I ACGT 5 cut(s) 378, 440, 587, 671, 677
Hsp92I GRCGYC 1 cut(s) 378
Hsp92II CATG 5 cut(s) 267, 531, 604, 862, 877
HspAI GCGC 6 cut(s) 126, 444, 459, 513, 525, 711
KroI GCCGGC 1 cut(s) 128
KroNI GCCGGC 1 cut(s) 130
Kzo9I GATC 3 cut(s) 411, 431, 699
LmnI GCTCC 6 cut(s) 65, 188, 308, 314, 423, 543
Lsp1109I GCAGC 5 cut(s) 186, 221, 304, 443, 622
LweI GCATC 3 cut(s) 33, 649, 671
MaeI CTAG 1 cut(s) 119
MaeII ACGT 5 cut(s) 378, 440, 587, 671, 677
MaeIII GTNAC 3 cut(s) 58, 92, 576
MalI GATC 3 cut(s) 413, 433, 701
MbiI CCGCTC 2 cut(s) 183, 426
MboI GATC 3 cut(s) 411, 431, 699
MboII GAAGA 3 cut(s) 710, 713, 744
MflI RGATCY 1 cut(s) 431
MhlI GDGCHC 6 cut(s) 10, 165, 485, 495, 548, 632
MlsI TGGCCA 1 cut(s) 109
MluCI AATT 2 cut(s) 11, 114
MluI ACGCGT 1 cut(s) 534
MluNI TGGCCA 1 cut(s) 109
MmeI TCCRAC 2 cut(s) 759, 771
MnlI CCTC 7 cut(s) 44, 47, 50, 479, 760, 814, 911
Mox20I TGGCCA 1 cut(s) 109
Mph1103I ATGCAT 1 cut(s) 664
MroNI GCCGGC 1 cut(s) 128
MscI TGGCCA 1 cut(s) 109
MseI TTAA 1 cut(s) 618
Msp20I TGGCCA 1 cut(s) 109
MspA1I CMGCKG 1 cut(s) 613
MspI CCGG 9 cut(s) 63, 129, 153, 210, 231, 312, 435, 548, 786
MspR9I CCNGG 4 cut(s) 111, 386, 548, 787
MvaI CCWGG 2 cut(s) 111, 386
MvnI CGCG 4 cut(s) 446, 515, 536, 626
NaeI GCCGGC 1 cut(s) 130
NciI CCSGG 2 cut(s) 548, 787
NcoI CCATGG 1 cut(s) 858
NdeII GATC 3 cut(s) 411, 431, 699
NgoMIV GCCGGC 1 cut(s) 128
NlaIII CATG 5 cut(s) 267, 531, 604, 862, 877
NlaIV GGNNCC 7 cut(s) 67, 133, 224, 310, 433, 482, 545
NmeAIII GCCGAG 3 cut(s) 330, 364, 514
NmuCI GTSAC 3 cut(s) 58, 92, 576
NsiI ATGCAT 1 cut(s) 664
NspI RCATGY 2 cut(s) 531, 877
PaeI GCATGC 1 cut(s) 531
PaeR7I CTCGAG 1 cut(s) 296
PcsI WCGNNNNNNNCGW 2 cut(s) 593, 654
PdiI GCCGGC 1 cut(s) 130
PfeI GAWTC 3 cut(s) 746, 782, 836
PkrI GCNGC 9 cut(s) 176, 215, 236, 319, 458, 509, 512, 612, 829
PmaCI CACGTG 1 cut(s) 588
PmlI CACGTG 1 cut(s) 588
Ppu21I YACGTR 3 cut(s) 441, 588, 678
PsiI TTATAA 1 cut(s) 399
Psp124BI GAGCTC 2 cut(s) 165, 495
Psp6I CCWGG 2 cut(s) 109, 384
PspCI CACGTG 1 cut(s) 588
PspEI GGTNACC 2 cut(s) 58, 576
PspGI CCWGG 2 cut(s) 109, 384
PspN4I GGNNCC 7 cut(s) 67, 133, 224, 310, 433, 482, 545
PspPI GGNCC 6 cut(s) 207, 223, 253, 289, 466, 898
PspXI VCTCGAGB 1 cut(s) 296
PsuI RGATCY 1 cut(s) 431
PvuII CAGCTG 1 cut(s) 613
RsaI GTAC 6 cut(s) 439, 554, 605, 641, 670, 682
RsaNI GTAC 6 cut(s) 438, 553, 604, 640, 669, 681
SacI GAGCTC 2 cut(s) 165, 495
SalI GTCGAC 1 cut(s) 500
SaqAI TTAA 1 cut(s) 618
SatI GCNGC 9 cut(s) 175, 214, 235, 318, 457, 508, 511, 611, 828
Sau3AI GATC 3 cut(s) 411, 431, 699
Sau96I GGNCC 6 cut(s) 207, 223, 253, 289, 466, 898
ScaI AGTACT 1 cut(s) 554
ScrFI CCNGG 4 cut(s) 111, 386, 548, 787
SduI GDGCHC 6 cut(s) 10, 165, 485, 495, 548, 632
SfaNI GCATC 3 cut(s) 33, 649, 671
Sfr274I CTCGAG 1 cut(s) 296
SinI GGWCC 2 cut(s) 207, 466
SlaI CTCGAG 1 cut(s) 296
SmlI CTYRAG 2 cut(s) 296, 363
SmoI CTYRAG 2 cut(s) 296, 363
SphI GCATGC 1 cut(s) 531
Sse9I AATT 2 cut(s) 11, 114
SspMI CTAG 1 cut(s) 119
SstI GAGCTC 2 cut(s) 165, 495
StyD4I CCNGG 4 cut(s) 109, 384, 546, 785
StyI CCWWGG 1 cut(s) 858
TaaI ACNGT 7 cut(s) 103, 248, 395, 476, 557, 582, 915
TaiI ACGT 5 cut(s) 381, 443, 590, 674, 680
TaqI TCGA 5 cut(s) 159, 243, 269, 297, 501
TasI AATT 2 cut(s) 11, 114
TatI WGTACW 2 cut(s) 552, 603
TauI GCSGC 4 cut(s) 216, 510, 513, 830
TfiI GAWTC 3 cut(s) 746, 782, 836
Tru1I TTAA 1 cut(s) 618
Tru9I TTAA 1 cut(s) 618
TseFI GTSAC 3 cut(s) 58, 92, 576
TseI GCWGC 5 cut(s) 174, 234, 317, 456, 610
Tsp45I GTSAC 3 cut(s) 58, 92, 576
TspGWI ACGGA 2 cut(s) 321, 479
VpaK11BI GGWCC 2 cut(s) 207, 466
XapI RAATTY 1 cut(s) 114
XceI RCATGY 2 cut(s) 531, 877
XhoI CTCGAG 1 cut(s) 296
XmiI GTMKAC 1 cut(s) 501
XspI CTAG 1 cut(s) 119
ZraI GACGTC 1 cut(s) 379
ZrmI AGTACT 1 cut(s) 554
Zsp2I ATGCAT 1 cut(s) 664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.