Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0002202

Physical Location & Seq

Genomic Coordinates Forward (+)

20037836 .. 20040781

Gene Structure 2946 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G226100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2598 bp

ATGGCACCTCCAAATGATTCTTTAAATTCAATCCTCATCGTGTCCCAACCCGAGAGTTTGGAACAATACTTTGATCTTTCTAATGGAAATCTTAGTGTTAGAGGAGTTCCATTGCTCTCTGAAGTTCCAAGCAATGTCACTTTGAATCCCTTTTACTCAATCTGCCAGCCGTCTGATGATGTTCCACTTCCTCTGCTCCACCGTGTCGGTGCCTTGTCCCACAAGGGAGGGTTCCTTGGATTCAACAAGGAGGAGCCTTCGGATAGGTTGATAAACTCCTTGGGCAGATTTAGCGGCAGGGATTTTCTTAGCATCTTTAGGTTCAAGACATGGTGGTCTACCATGTGGGTGGGAAACTCTGGGTCAAATGTGCAACTGGAGACCCAATGGGTTCTTTTTGATGTCCCTGAAATAAAGTCCTATGTCATAATCATCCCCATTGTTGATGGCTCTTTTAGGTCTGCTCTTCAACCTGGCACTGATGGCCATGTCATGATCTGTGCTGAGAGTGGTTCTACCCAAGTGAAAGCATCGAATTTCGATGCCATTGCTTATATCCATGCTTCTGACAATCCCTACAACTTGATGAAAGAGGCCTTTAGTGCTATTAGGGTCCATCTCGATACTTTTAGGCTGTTGGAAGAGAAAACAGTCCCAAATCTTGTTGACAAATTTGGTTGGTGCACTTGGGATTCCTTCTACTTAACTGTAGAACCTGTTGGTATCTGGCATGGTATCAATGAATTTGCTGAAGGCGGTGTATCTCCTCGCTTTCTCATCGTTGATGATGGCTGGCAAAGCATCAATTTTGATGATGATCAGGATCCAAGTGAGGACGCGAAAAATTTAGTTCTCTGTGGGAGTCAAATGACTGCTAGGCTTCACAGGCTTGATGAGTGCAAGAAGTTCAAGAACTACAAAGGTGGATGCATGTTGGGTCCCAACGCTCCTTCATTTGATCCGAAAAGGCCAAAGATGTTGATAGGCAAAGCAGTTGAACTAGAGCATGCTGAGAAGGCCCGTGACAAGGCCATTCAATCTGGAGTCACTGACTTATCCGAGTTTGAAAGGAAAATTCAGAAGTTGAATCAGGAGTTGAATGAGTTACTTGGTGGAGAAGAAAGCAGTGTTTCTAATAATGGCTGTGAAAGAAGTCCTTGCGGGGCTGAAAGCTATGGGCTTAAGGCTTTCACAAGTGACTTGAGAACCAAGTTTAAGGGTTTGGATGATATATATGTGTGGCATGCTCTTTGTGGTGCCTGGTCTGGTGTTAAGCCAGGTGCAACCCACCTCAATGCAAAGGTCACTCCCTGCATTGTCTCTCCTGGACTTGACGGGACGATGAATGATCTCGCTGTGGATAAAGTCGTTGAGGGTGGGATGGGACTTGTTCATCCGGACCATGCTAATCTTTTATATGACTCTATGCACTCGTACCTTTCCGGAGTTGGTATCACAGGAGTCAAAGTGGATGTTATTCATACTCTTGAATATGTGTCCGAGGAATATGGAGGCCGTGTGGAGCTTGCAAAGGCTTATTACAAGGGGCTGAGTGATTCTCTTGTGAAGAACTTCAATGGGAGTGGGCTTATTTCTAGCATGCAACAATGCAATGACTTCTTCTTCCTTGGGACAAGGCAAATCTCTATGGGAAGAGCTGGAGATGATTTTTGGTTCCAGGATCCAAGTGGAGATCCTATGGGAGTTTACTGGTTACAAGGTGTGCATATGATCCACTGTTCCTACAACAGCATGTGGATGGGTCAGATGATAGTCCCTGATTGGGATATGTTCCAATCAGACCATCTGTGTGCCAAATATCATGCTGGATCCAGGGCTATCTGTGGAGGTCCAGTGTATTTAAGTGACTACGTCGGTAGCCATGATTTCGATCTCATAAAGAAGCTTGTTCACCCAGATGGTACCATTCCCAAGTGCCAGAACTTTGCCCTTCCAACAAGGGACTGCCTCTTCAAAAACCCTTTATTTGACAACAAGACTGCTCTCAAAATTTGGAACTTGAACAAGTATGGTGGAGTGATTGGAGGGTTCAACTGCCAAGGGGCTGGTTGGGACCCCAAGGAGCACAGGATCAAAGGCTATCCAGATTGCTACAAGCCAATCTTTTGTTCAGTGCATGTTTCTGATATTGAATGGGATCAAAACATAGAAGCAGCCTATTTGGGCAAGGCTGAAGAGTACCTGGTCTATCTCAACCAGGCTGATGAGCTGCGCCTTGTGACTCCAAAATCTGCTGCAATTCAAAGCACTCTCCAGCCGTCTTCGTTCGAGCTTTTCACCTTTGTGCCAGTCCAAAAGCTCAGCGATAGCATCAAATTCGCGCCAATTGGACTTACAAACATGTTCAACAGTGGAGGAACCGTCCAAGAGTTGGAGTACGAAAGTGAGGGTGAGTTTAGTGCCAAGATGAAGGTTAAAGGAGGAGGCAATTTCTTGGCCTACTCAAGTGGATGTCCAAAGAAATGTTATTTGAACGGTGCTGAGGTGGCTATCGAGTGGTCCGAGGGCAAACTGAACTTGAGTCTTCCTTGGGTTGAAGAAGCTGCTGGCATTTCTGAGTTGGGTTTTGTGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006950 GO:0006979 GO:0008150 GO:0008378 GO:0009628 GO:0016740 GO:0016757 GO:0016758 GO:0047268 GO:0050896 GO:0080167

KEGG Pathways

Metabolic & Signaling

ko00052 map00052

Pfam Domains

Protein Families

Raffinose_syn

Protein Analysis

866

Amino Acids

95.77

Weight (kDa)

5.2

Isoelectric Point (pI)

31.85

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01970 AT4G01970
fragaria_vesca	FvH4_1g27000 FvH4_7g13680
malus_domestica	MD09G1285100.v1.1 MD15G1191100.v1.1
prunus_persica	Prupe.3G008900_v2.0.a1 Prupe.7G226100_v2.0.a1
pyrus_communis	pycom09g19250
rosa_chinensis	RchiOBHm_Chr1g0353751 RchiOBHm_Chr2g0091201 RchiOBHm_Chr3g0487291 RchiOBHm_Chr3g0487311
rosa_laevigata	RLG00000016191 RLG00000023016 RLG00000023018 RLG00000028260
rosa_multiflora	Rmu_co8130058.1_g000001 Rmu_sc0002270.1_g000014 Rmu_sc0021704.1_g000002 Rmu_sc0033684.1_g000007
rosa_roxburghii	Rroxscaffold_2G00150390 Rroxscaffold_4G00301680 Rroxscaffold_6G00394920 Rroxscaffold_6G00394970
rosa_rugosa	Rorug01G0237700 Rorug02G0014400 Rorug03G0232800
rosa_samantha	Rh1AG249700 Rh1BG219900 Rh1CG232300 Rh1DG246900 Rh2BG058900 Rh2CG060700 Rh3AG280600 Rh3AG280800 Rh3BG316500 Rh3CG314700 Rh3DG312500
rosa_wichuraiana	Rw1G021790 Rw2G004970 Rw3G024860 Rw3G024890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	334
Acc65I	GGTACC	1 cut(s)	1922
AccB1I	GGYRCC	4 cut(s)	4, 209, 1256, 1922
AccB7I	CCANNNNNTGG	1 cut(s)	2392
AccI	GTMKAC	1 cut(s)	338
AccII	CGCG	2 cut(s)	839, 2342
AccIII	TCCGGA	2 cut(s)	1396, 1442
AciI	CCGC	3 cut(s)	294, 756, 1161
AcoI	YGGCCR	1 cut(s)	484
AcsI	RAATTY	8 cut(s)	25, 535, 671, 743, 844, 1074, 2010, 2336
AcuI	CTGAAG	3 cut(s)	141, 771, 2214
AfaI	GTAC	4 cut(s)	1436, 1924, 2201, 2399
AfiI	CCNNNNNNNGG	3 cut(s)	1027, 1783, 2392
AflII	CTTAAG	1 cut(s)	1181
AflIII	ACRYGT	1 cut(s)	2361
AjnI	CCWGG	8 cut(s)	472, 1259, 1276, 1324, 1677, 1832, 2202, 2217
AjuI	GAANNNNNNNTTGG	2 cut(s)	2113, 2145
AleI	CACNNNNGTG	1 cut(s)	2303
AluBI	AGCT	8 cut(s)	1173, 1525, 1658, 1906, 2230, 2293, 2320, 2564
AluI	AGCT	8 cut(s)	1173, 1525, 1658, 1906, 2230, 2293, 2320, 2564
Alw21I	GWGCWC	2 cut(s)	686, 2088
Alw26I	GTCTC	2 cut(s)	374, 1324
Alw44I	GTGCAC	1 cut(s)	682
Ama87I	CYCGRG	1 cut(s)	50
Aor13HI	TCCGGA	2 cut(s)	1396, 1442
AoxI	GGCC	7 cut(s)	484, 594, 968, 1017, 1029, 1513, 2457
ApaLI	GTGCAC	1 cut(s)	682
ApeKI	GCWGC	4 cut(s)	2174, 2230, 2255, 2564
ApoI	RAATTY	8 cut(s)	25, 535, 671, 743, 844, 1074, 2010, 2336
Asp700I	GAANNNNTTC	1 cut(s)	1571
Asp718I	GGTACC	1 cut(s)	1922
AspLEI	GCGC	2 cut(s)	2235, 2344
AspS9I	GGNCC	7 cut(s)	613, 938, 1018, 1399, 1850, 2074, 2520
AsuHPI	GGTGA	3 cut(s)	1904, 2290, 2423
AvaI	CYCGRG	1 cut(s)	50
AvaII	GGWCC	6 cut(s)	613, 938, 1399, 1850, 2074, 2520
BaeGI	GKGCMC	1 cut(s)	686
BalI	TGGCCA	1 cut(s)	486
BamHI	GGATCC	3 cut(s)	823, 1681, 1829
BanI	GGYRCC	4 cut(s)	4, 209, 1256, 1922
BbsI	GAAGAC	2 cut(s)	2274, 2537
Bbv12I	GWGCWC	2 cut(s)	686, 2088
BbvCI	CCTCAGC	1 cut(s)	2502
BbvI	GCAGC	4 cut(s)	2186, 2217, 2242, 2551
BccI	CCATC	8 cut(s)	440, 476, 624, 782, 1375, 1753, 1812, 1913
BceAI	ACGGC	3 cut(s)	154, 1500, 2263
BcgI	CGANNNNNNTGC	4 cut(s)	530, 564, 2320, 2354
BciT130I	CCWGG	8 cut(s)	474, 1261, 1278, 1326, 1679, 1834, 2204, 2219
BclI	TGATCA	1 cut(s)	817
BcoDI	GTCTC	2 cut(s)	374, 1324
BfaI	CTAG	3 cut(s)	876, 1001, 1596
BfmI	CTRYAG	1 cut(s)	708
BfrI	CTTAAG	1 cut(s)	1181
BisI	GCNGC	5 cut(s)	295, 2175, 2231, 2256, 2565
BlpI	GCTNAGC	1 cut(s)	2321
BlsI	GCNGC	5 cut(s)	296, 2176, 2232, 2257, 2566
Bme1390I	CCNGG	8 cut(s)	474, 1261, 1278, 1326, 1679, 1834, 2204, 2219
Bme18I	GGWCC	6 cut(s)	613, 938, 1399, 1850, 2074, 2520
BmeT110I	CYCGRG	1 cut(s)	50
BmgT120I	GGNCC	7 cut(s)	613, 938, 1018, 1399, 1850, 2074, 2520
BmrFI	CCNGG	8 cut(s)	474, 1261, 1278, 1326, 1679, 1834, 2204, 2219
BmsI	GCATC	6 cut(s)	321, 532, 539, 810, 917, 2340
BpiI	GAAGAC	2 cut(s)	2274, 2537
BplI	GAGNNNNNCTC	2 cut(s)	1543, 1575
BpmI	CTGGAG	4 cut(s)	398, 1062, 1680, 2258
Bpu10I	CCTNAGC	1 cut(s)	2502
Bpu1102I	GCTNAGC	1 cut(s)	2321
BpuEI	CTTGAG	3 cut(s)	1222, 2449, 2560
BsaBI	GATNNNNATC	3 cut(s)	816, 822, 1890
BsaI	GGTCTC	1 cut(s)	374
BsaJI	CCNNGG	9 cut(s)	235, 279, 1500, 1627, 1833, 2059, 2079, 2523, 2549
BsaWI	WCCGGW	2 cut(s)	1396, 1442
BsaXI	ACNNNNNCTCC	8 cut(s)	1452, 1482, 1503, 1533, 1839, 1869, 2367, 2397
Bsc4I	CCNNNNNNNGG	3 cut(s)	1027, 1783, 2392
Bse1I	ACTGG	4 cut(s)	381, 1715, 1853, 2309
Bse3DI	GCAATG	4 cut(s)	110, 139, 546, 1618
Bse8I	GATNNNNATC	3 cut(s)	816, 822, 1890
BseAI	TCCGGA	2 cut(s)	1396, 1442
BseBI	CCWGG	8 cut(s)	474, 1261, 1278, 1326, 1679, 1834, 2204, 2219
BseDI	CCNNGG	9 cut(s)	235, 279, 1500, 1627, 1833, 2059, 2079, 2523, 2549
BseGI	GGATG	8 cut(s)	432, 932, 1231, 1386, 1393, 1477, 1764, 2477
BseJI	GATNNNNATC	3 cut(s)	816, 822, 1890
BseLI	CCNNNNNNNGG	3 cut(s)	1027, 1783, 2392
BseMI	GCAATG	4 cut(s)	110, 139, 546, 1618
BseMII	CTCAG	6 cut(s)	495, 1002, 1541, 2335, 2493, 2568
BseNI	ACTGG	4 cut(s)	381, 1715, 1853, 2309
BseRI	GAGGAG	4 cut(s)	117, 266, 756, 2457
BseSI	GKGCMC	1 cut(s)	686
BseXI	GCAGC	4 cut(s)	2186, 2217, 2242, 2551
Bsh1236I	CGCG	2 cut(s)	839, 2342
BshFI	GGCC	7 cut(s)	486, 596, 970, 1019, 1031, 1515, 2459
BshNI	GGYRCC	4 cut(s)	4, 209, 1256, 1922
BsiHKAI	GWGCWC	2 cut(s)	686, 2088
BsiHKCI	CYCGRG	1 cut(s)	50
BsiSI	CCGG	2 cut(s)	1397, 1443
BslI	CCNNNNNNNGG	3 cut(s)	1027, 1783, 2392
BsmAI	GTCTC	2 cut(s)	374, 1324
BsnI	GGCC	7 cut(s)	486, 596, 970, 1019, 1031, 1515, 2459
Bso31I	GGTCTC	1 cut(s)	374
BsoBI	CYCGRG	1 cut(s)	50
Bsp1286I	GDGCHC	2 cut(s)	686, 2088
Bsp13I	TCCGGA	2 cut(s)	1396, 1442
Bsp1720I	GCTNAGC	1 cut(s)	2321
BspACI	CCGC	3 cut(s)	294, 756, 1161
BspANI	GGCC	7 cut(s)	486, 596, 970, 1019, 1031, 1515, 2459
BspCNI	CTCAG	6 cut(s)	496, 1003, 1542, 2334, 2494, 2569
BspEI	TCCGGA	2 cut(s)	1396, 1442
BspFNI	CGCG	2 cut(s)	839, 2342
BspHI	TCATGA	1 cut(s)	492
BspQI	GCTCTTC	2 cut(s)	471, 1648
BspT107I	GGYRCC	4 cut(s)	4, 209, 1256, 1922
BspTI	CTTAAG	1 cut(s)	1181
BspTNI	GGTCTC	1 cut(s)	374
BsrDI	GCAATG	4 cut(s)	110, 139, 546, 1618
BsrI	ACTGG	4 cut(s)	381, 1715, 1853, 2309
BssECI	CCNNGG	9 cut(s)	235, 279, 1500, 1627, 1833, 2059, 2079, 2523, 2549
BssT1I	CCWWGG	6 cut(s)	235, 279, 1627, 2059, 2079, 2549
Bst2UI	CCWGG	8 cut(s)	474, 1261, 1278, 1326, 1679, 1834, 2204, 2219
Bst4CI	ACNGT	7 cut(s)	203, 652, 709, 1739, 2372, 2383, 2498
Bst6I	CTCTTC	5 cut(s)	471, 636, 1648, 1976, 2190
BstAFI	CTTAAG	1 cut(s)	1181
BstC8I	GCNNGC	7 cut(s)	167, 794, 1008, 1245, 1527, 1601, 2569
BstDEI	CTNAG	8 cut(s)	92, 308, 504, 1011, 1550, 2321, 2502, 2577
BstF5I	GGATG	8 cut(s)	432, 932, 1231, 1386, 1393, 1477, 1764, 2477
BstFNI	CGCG	2 cut(s)	839, 2342
BstHHI	GCGC	2 cut(s)	2235, 2344
BstMAI	GTCTC	2 cut(s)	374, 1324
BstMWI	GCNNNNNNNGC	7 cut(s)	291, 483, 602, 798, 886, 1016, 2507
BstNI	CCWGG	8 cut(s)	474, 1261, 1278, 1326, 1679, 1834, 2204, 2219
BstNSI	RCATGY	7 cut(s)	934, 1010, 1247, 1603, 1756, 2141, 2365
BstSCI	CCNGG	8 cut(s)	472, 1259, 1276, 1324, 1677, 1832, 2202, 2217
BstSFI	CTRYAG	1 cut(s)	708
BstSLI	GKGCMC	1 cut(s)	686
BstUI	CGCG	2 cut(s)	839, 2342
BstV1I	GCAGC	4 cut(s)	2186, 2217, 2242, 2551
BstV2I	GAAGAC	2 cut(s)	2274, 2537
BstX2I	RGATCY	4 cut(s)	823, 1681, 1693, 1829
BstXI	CCANNNNNNTGG	2 cut(s)	349, 2066
BstYI	RGATCY	4 cut(s)	823, 1681, 1693, 1829
BsuRI	GGCC	7 cut(s)	486, 596, 970, 1019, 1031, 1515, 2459
BtsCI	GGATG	8 cut(s)	432, 932, 1231, 1386, 1393, 1477, 1764, 2477
BtsI	GCAGTG	1 cut(s)	1132
BtsIMutI	CAGTG	7 cut(s)	477, 1047, 1132, 1735, 1860, 2139, 2377
Cac8I	GCNNGC	7 cut(s)	167, 794, 1008, 1245, 1527, 1601, 2569
CciI	TCATGA	1 cut(s)	492
CfoI	GCGC	2 cut(s)	2235, 2344
Cfr13I	GGNCC	7 cut(s)	613, 938, 1018, 1399, 1850, 2074, 2520
CseI	GACGC	1 cut(s)	845
CsiI	ACCWGGT	1 cut(s)	2202
Csp6I	GTAC	4 cut(s)	1435, 1923, 2200, 2398
CspCI	CAANNNNNGTGG	4 cut(s)	1564, 1599, 2014, 2049
CviQI	GTAC	4 cut(s)	1435, 1923, 2200, 2398
DdeI	CTNAG	8 cut(s)	92, 308, 504, 1011, 1550, 2321, 2502, 2577
DraI	TTTAAA	1 cut(s)	24
DrdI	GACNNNNNNGTC	1 cut(s)	334
DseDI	GACNNNNNNGTC	1 cut(s)	334
EaeI	YGGCCR	1 cut(s)	484
Eam1104I	CTCTTC	5 cut(s)	471, 636, 1648, 1976, 2190
EarI	CTCTTC	5 cut(s)	471, 636, 1648, 1976, 2190
Eco130I	CCWWGG	6 cut(s)	235, 279, 1627, 2059, 2079, 2549
Eco147I	AGGCCT	1 cut(s)	596
Eco31I	GGTCTC	1 cut(s)	374
Eco47I	GGWCC	6 cut(s)	613, 938, 1399, 1850, 2074, 2520
Eco57I	CTGAAG	3 cut(s)	141, 771, 2214
Eco88I	CYCGRG	1 cut(s)	50
EcoO109I	RGGNCCY	2 cut(s)	938, 2074
EcoRII	CCWGG	8 cut(s)	472, 1259, 1276, 1324, 1677, 1832, 2202, 2217
EcoT14I	CCWWGG	6 cut(s)	235, 279, 1627, 2059, 2079, 2549
EcoT22I	ATGCAT	1 cut(s)	932
ErhI	CCWWGG	6 cut(s)	235, 279, 1627, 2059, 2079, 2549
FalI	AAGNNNNNCTT	4 cut(s)	1141, 1173, 2108, 2140
FauI	CCCGC	1 cut(s)	1154
FauNDI	CATATG	1 cut(s)	1728
FbaI	TGATCA	1 cut(s)	817
FblI	GTMKAC	1 cut(s)	338
Fnu4HI	GCNGC	5 cut(s)	295, 2175, 2231, 2256, 2565
FokI	GGATG	8 cut(s)	419, 939, 1238, 1380, 1393, 1484, 1771, 2484
Fsp4HI	GCNGC	5 cut(s)	295, 2175, 2231, 2256, 2565
FspBI	CTAG	3 cut(s)	876, 1001, 1596
GlaI	GCGC	2 cut(s)	2234, 2343
GluI	GCNGC	5 cut(s)	295, 2175, 2231, 2256, 2565
GsuI	CTGGAG	4 cut(s)	398, 1062, 1680, 2258
HaeIII	GGCC	7 cut(s)	486, 596, 970, 1019, 1031, 1515, 2459
HapII	CCGG	2 cut(s)	1397, 1443
HgaI	GACGC	1 cut(s)	845
HhaI	GCGC	2 cut(s)	2235, 2344
Hin6I	GCGC	2 cut(s)	2233, 2342
HinP1I	GCGC	2 cut(s)	2233, 2342
HincII	GTYRAC	1 cut(s)	667
HindII	GTYRAC	1 cut(s)	667
HindIII	AAGCTT	1 cut(s)	1904
HpaII	CCGG	2 cut(s)	1397, 1443
HphI	GGTGA	3 cut(s)	1904, 2290, 2423
Hpy166II	GTNNAC	5 cut(s)	339, 667, 684, 1708, 1912
Hpy8I	GTNNAC	5 cut(s)	339, 667, 684, 1708, 1912
Hpy99I	CGWCG	1 cut(s)	1877
HpyAV	CCTTC	7 cut(s)	267, 706, 746, 960, 1009, 1961, 2425
HpyCH4III	ACNGT	7 cut(s)	203, 652, 709, 1739, 2372, 2383, 2498
HpyCH4IV	ACGT	1 cut(s)	1872
HpyF10VI	GCNNNNNNNGC	7 cut(s)	291, 483, 602, 798, 886, 1016, 2507
HpyF3I	CTNAG	8 cut(s)	92, 308, 504, 1011, 1550, 2321, 2502, 2577
HpySE526I	ACGT	1 cut(s)	1872
HspAI	GCGC	2 cut(s)	2233, 2342
KflI	GGGWCCC	2 cut(s)	938, 2074
Kpn2I	TCCGGA	2 cut(s)	1396, 1442
KpnI	GGTACC	1 cut(s)	1926
Ksp22I	TGATCA	1 cut(s)	817
LguI	GCTCTTC	2 cut(s)	471, 1648
LmnI	GCTCC	5 cut(s)	201, 253, 952, 1522, 2083
Lsp1109I	GCAGC	4 cut(s)	2186, 2217, 2242, 2551
LweI	GCATC	6 cut(s)	321, 532, 539, 810, 917, 2340
MabI	ACCWGGT	1 cut(s)	2202
MaeI	CTAG	3 cut(s)	876, 1001, 1596
MaeII	ACGT	1 cut(s)	1872
MaeIII	GTNAC	9 cut(s)	136, 1022, 1045, 1104, 1196, 1303, 1713, 1865, 2239
MfeI	CAATTG	1 cut(s)	2346
MflI	RGATCY	4 cut(s)	823, 1681, 1693, 1829
MhlI	GDGCHC	2 cut(s)	686, 2088
MlsI	TGGCCA	1 cut(s)	486
MluNI	TGGCCA	1 cut(s)	486
MlyI	GAGTC	6 cut(s)	871, 1053, 1415, 1470, 2236, 2551
MmeI	TCCRAC	3 cut(s)	618, 1979, 2373
Mox20I	TGGCCA	1 cut(s)	486
Mph1103I	ATGCAT	1 cut(s)	932
MroI	TCCGGA	2 cut(s)	1396, 1442
MroXI	GAANNNNTTC	1 cut(s)	1571
MscI	TGGCCA	1 cut(s)	486
MseI	TTAA	7 cut(s)	23, 704, 1182, 1215, 1272, 1862, 2436
MslI	CAYNNNNRTG	6 cut(s)	347, 1293, 1757, 1809, 1917, 2303
Msp20I	TGGCCA	1 cut(s)	486
MspCI	CTTAAG	1 cut(s)	1181
MspI	CCGG	2 cut(s)	1397, 1443
MspR9I	CCNGG	8 cut(s)	474, 1261, 1278, 1326, 1679, 1834, 2204, 2219
MunI	CAATTG	1 cut(s)	2346
MvaI	CCWGG	8 cut(s)	474, 1261, 1278, 1326, 1679, 1834, 2204, 2219
MvnI	CGCG	2 cut(s)	839, 2342
MwoI	GCNNNNNNNGC	7 cut(s)	291, 483, 602, 798, 886, 1016, 2507
NdeI	CATATG	1 cut(s)	1728
NmuCI	GTSAC	7 cut(s)	136, 1022, 1045, 1196, 1303, 1865, 2239
NsiI	ATGCAT	1 cut(s)	932
NspI	RCATGY	7 cut(s)	934, 1010, 1247, 1603, 1756, 2141, 2365
OliI	CACNNNNGTG	1 cut(s)	2303
PaeI	GCATGC	3 cut(s)	1010, 1247, 1603
PagI	TCATGA	1 cut(s)	492
PceI	AGGCCT	1 cut(s)	596
PciI	ACATGT	1 cut(s)	2361
PciSI	GCTCTTC	2 cut(s)	471, 1648
PcsI	WCGNNNNNNNCGW	1 cut(s)	2520
PdmI	GAANNNNTTC	1 cut(s)	1571
PfeI	GAWTC	6 cut(s)	17, 145, 240, 692, 1087, 1556
PflFI	GACNNNGTC	1 cut(s)	1871
PflMI	CCANNNNNTGG	1 cut(s)	2392
PfoI	TCCNGGA	2 cut(s)	1324, 1677
PkrI	GCNGC	5 cut(s)	296, 2176, 2232, 2257, 2566
PleI	GAGTC	6 cut(s)	870, 1052, 1415, 1469, 2236, 2550
PpsI	GAGTC	6 cut(s)	870, 1052, 1415, 1469, 2236, 2550
PpuMI	RGGWCCY	2 cut(s)	938, 2074
PscI	ACATGT	1 cut(s)	2361
Psp5II	RGGWCCY	2 cut(s)	938, 2074
Psp6I	CCWGG	8 cut(s)	472, 1259, 1276, 1324, 1677, 1832, 2202, 2217
PspGI	CCWGG	8 cut(s)	472, 1259, 1276, 1324, 1677, 1832, 2202, 2217
PspPI	GGNCC	7 cut(s)	613, 938, 1018, 1399, 1850, 2074, 2520
PspPPI	RGGWCCY	2 cut(s)	938, 2074
PsuI	RGATCY	4 cut(s)	823, 1681, 1693, 1829
PsyI	GACNNNGTC	1 cut(s)	1871
RsaI	GTAC	4 cut(s)	1436, 1924, 2201, 2399
RsaNI	GTAC	4 cut(s)	1435, 1923, 2200, 2398
RseI	CAYNNNNRTG	6 cut(s)	347, 1293, 1757, 1809, 1917, 2303
SapI	GCTCTTC	2 cut(s)	471, 1648
SaqAI	TTAA	7 cut(s)	23, 704, 1182, 1215, 1272, 1862, 2436
SatI	GCNGC	5 cut(s)	295, 2175, 2231, 2256, 2565
Sau96I	GGNCC	7 cut(s)	613, 938, 1018, 1399, 1850, 2074, 2520
SchI	GAGTC	6 cut(s)	871, 1053, 1415, 1470, 2236, 2551
ScrFI	CCNGG	8 cut(s)	474, 1261, 1278, 1326, 1679, 1834, 2204, 2219
SduI	GDGCHC	2 cut(s)	686, 2088
SexAI	ACCWGGT	1 cut(s)	2202
SfaNI	GCATC	6 cut(s)	321, 532, 539, 810, 917, 2340
SfcI	CTRYAG	1 cut(s)	708
SinI	GGWCC	6 cut(s)	613, 938, 1399, 1850, 2074, 2520
SmiMI	CAYNNNNRTG	6 cut(s)	347, 1293, 1757, 1809, 1917, 2303
SmlI	CTYRAG	4 cut(s)	1181, 1201, 2464, 2539
SmoI	CTYRAG	4 cut(s)	1181, 1201, 2464, 2539
SphI	GCATGC	3 cut(s)	1010, 1247, 1603
SseBI	AGGCCT	1 cut(s)	596
SsiI	CCGC	3 cut(s)	294, 756, 1161
SspMI	CTAG	3 cut(s)	876, 1001, 1596
StuI	AGGCCT	1 cut(s)	596
StyD4I	CCNGG	8 cut(s)	472, 1259, 1276, 1324, 1677, 1832, 2202, 2217
StyI	CCWWGG	6 cut(s)	235, 279, 1627, 2059, 2079, 2549
TaaI	ACNGT	7 cut(s)	203, 652, 709, 1739, 2372, 2383, 2498
TaiI	ACGT	1 cut(s)	1875
TaqI	TCGA	6 cut(s)	533, 540, 621, 1890, 2289, 2514
TauI	GCSGC	1 cut(s)	297
TfiI	GAWTC	6 cut(s)	17, 145, 240, 692, 1087, 1556
Tru1I	TTAA	7 cut(s)	23, 704, 1182, 1215, 1272, 1862, 2436
Tru9I	TTAA	7 cut(s)	23, 704, 1182, 1215, 1272, 1862, 2436
TscAI	CASTG	7 cut(s)	484, 1054, 1132, 1742, 1860, 2139, 2377
TseFI	GTSAC	7 cut(s)	136, 1022, 1045, 1196, 1303, 1865, 2239
TseI	GCWGC	4 cut(s)	2174, 2230, 2255, 2564
Tsp45I	GTSAC	7 cut(s)	136, 1022, 1045, 1196, 1303, 1865, 2239
TspDTI	ATGAA	7 cut(s)	602, 756, 942, 1358, 1382, 1469, 2444
TspRI	CASTG	7 cut(s)	484, 1054, 1132, 1742, 1860, 2139, 2377
Tth111I	GACNNNGTC	1 cut(s)	1871
Van91I	CCANNNNNTGG	1 cut(s)	2392
Vha464I	CTTAAG	1 cut(s)	1181
VneI	GTGCAC	1 cut(s)	682
VpaK11BI	GGWCC	6 cut(s)	613, 938, 1399, 1850, 2074, 2520
XapI	RAATTY	8 cut(s)	25, 535, 671, 743, 844, 1074, 2010, 2336
XceI	RCATGY	7 cut(s)	934, 1010, 1247, 1603, 1756, 2141, 2365
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1685
XmiI	GTMKAC	1 cut(s)	338
XmnI	GAANNNNTTC	1 cut(s)	1571
XspI	CTAG	3 cut(s)	876, 1001, 1596
Zsp2I	ATGCAT	1 cut(s)	932

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.