Rroxscaffold_2G00150390

Stachyose

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000002
OG0002202
Physical Location & Seq
Forward (+)
87793532 .. 87796421
2890 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_2G00150390.1

Sequence Viewer

Length: 2592 bp
ATGGCACCACCTAATGAACCTGTTAATCCAGTTCGAAATTTGTTCCATTGTGCGAGTTCGGAACCCTACTTCGACTTGTCTGATGGAAAGTTGAGTGTGAAAGGTGTTCCACTGCTCTCTGCAGTTCCTACCAATGTCACTCTCAGTCCCTTTCATTCAATCTGCCAACCTTCTTGTTCTGATGTTCCATCTCATCTGGTCCGACGCGTCTGTGCCTTGTCCCACAAGGCAGGGTTTCTTGGGTTCAATAAAGCGGAGCCTTCTGATAAGCTGACCAACTTCTTGGGTAGGTTCAGTAATAGGGATTTCCTTAGCATCTTTAGGTTCAAACCATGGTGGTCTACCATGTGGGTTGGGAAGTCTGGGTCGGATTTGCAGGTGGAGACACAATGGGTGCTCTTAGATATCCCTGAAATCAAGTCCTATGTCATAATCATACCGATCATTGAAGACAAATTCAGGTCTGCCCTTCTACCTGGTCCTGATGGTCATGTCATTGTCTTTGCTGAGAGTGGTTGTACCCAAGTGAAAACTTCACATTTCGATGCCATCGCTTATGTTCATGCTTCTGATAATCCCTACACCTTGATGAAAGAGGCCTATAGTGCTCTTAGGGTTCATCTCAATACCTTTAGGCTCCTAGAAGAGAAAACAGTCCCAAGTTTAGTTGACAAGTTTGGTTGGTGCACTTGGGATGCCTTCTATTTAACTGTAGAACCTGTTGGTGTTTTCCATGTGGTCAAGGAATTTGTTGATGCCGGTGTTCCCCCAAGGTTTATCATCATTGATGATGGCTGGCAAAGTATCAATTTTGACAGTGACGAAAACCCGAATGAGGACGCACATCTAATCCTTGGTGGGACTCAAATGACTGGTAGGCTTCACAGGTTTGAGGAGTGTGACAAGTTTAGGAACTACAAAGGAGGATCTTTGTTGGATCCTAACGCTCCTTCATATGATTCCAACAGGCAGAAGAAGTTGATAGCCAAGGCACTTGAAGTTGAGGATATTGAGAAGGCTCGTGACAGGGCCATTCAATCAGGACTCATTGATTTGTCCGAGTTCAAAACACAATGGCAGAAGCCTAAGCAAGAGTTGGATGTGATGATTGCTGAAGAAGAAAAAATTAGTGGTTCTGCTTCTACCAATGGCTGTGGAAGCTATGGAGGAATGAAGGCTTTCACAAGCGACTTGAGAACCAAATTTAAGGGTTTGGATGATATTTATGTATGGCATGCTCTTTGTGGTGCCTGGGGTGGTGTAAAGCCCGGCGCAACCCATCTCAATGCACAGGTCACTGCTGTTAATGTCTCTTCTGGACTCGACGGGTCGATGACTGATCTTGCTGTGGTGAAACTCATAGAGGGTGGCATTGGACTCGTTCATCCTGATCAAGCTGACGATTTCTTCAATTCTATGCACTCCTATCTTTCTGAAGTTGGTATAACAGGAGTCAAAGTGGACGTTATTCATAGTCTTGAGTTTTTATGTGAGGAACACGGAGGCCGTCTGGAGCTTCCAAAGGCATATTACAAGGGGCTTACTTCTTCCCTTGTAAATTACTTCAATGGGACTGGACTTATTTCTAGCATGCAACAATGCAACGACTTCTTCTTCCTTGGGACTAAGCAAATCTCTATTGGAAGAGTTGGTGATGACTTTTGGTTCCGTGGTGGAGATGGAGACCCTATGGCAGTTTATTGGTTACAAGGAGTTCATATGATCCATTGTGCTTACAACAGCATGTGGATGAGTCAGTTCATCCAACCTGATTGGGATATGTTCCAATCAGAACATCCATGTGGCCAATTTCATGCAGCATCGCGGGCAATATGTGGAGGTCCGGTGTATGTGAGTGACTCGCTTGATTGTCATGATTTTGATCTCATCAAGAAGTTTGCTTACCCAGATGGAACCATTCCCAAGTGCCAGCACTTTGCCCTTCCAACTAGGGACTGTCTCTTCAAAAACCCTTTGAATGACAGCAAGTCCGCTCTCAAAATTTGGAACTTGAACAAGTATGCTGGTGTCATTGGAGCTTTCAACTGCCAAGGGGCTGGTTGGGATCCAAAAGAGCAAAAGATCAGAGGCTATCCCGAATGGTATGAGGAAATCCATTGTTCAGTGCATGTTTCTGAAATTGAATGGGACCAAAAGAAAGAAGCAGCCAATTTGGGCAAGGCTGAACAGTATGCGGTCTATCTCAACCAGACTGATGAACTCCTCCTCATGACCCCCAAGTCTGATCCAATTCAAATCACAATCAAACCATCTTCGTTCGAGATTTTCACCTTTGTGCCAGTTCAAAATCTCCGCTCCAGCAACACTAAATTCTCGCCTATTGGACTGACCAACATGTTCAACAGTGGAGGCACCATCCAAGAGTTGGAGTACAATTCGGTTTCTTCTAGTGTCAAGATGAAGGTTAAAGGTGGAGGTAATTTCTTGGCCTACTCGAGTGAGTCCCCAAAGAATTTCTGTTTGAATGGTTCTGAGGTGGATTTTGAGTGGTCTTCCTGTGGTAAACTGACCCTGAATCTTCCTTGGGTTGAAGAAGCGGCTGGAGTTTCGGATGTGGTTTTGGTGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0006950 GO:0006979 GO:0008150 GO:0008378 GO:0009628 GO:0016740 GO:0016757 GO:0016758 GO:0047268 GO:0050896 GO:0080167
KEGG Pathways
Metabolic & Signaling
ko00052 map00052
Pfam Domains
Protein Families
Raffinose_syn

Protein Analysis

863

Amino Acids

96.09

Weight (kDa)

5.44

Isoelectric Point (pI)

34.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Raffinose_syn PF05691 24 - 846 8e-304 Raffinose synthase or seed imbibition protein Sip1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 367
AasI GACNNNNNNGTC 1 cut(s) 2239
Acc36I ACCTGC 1 cut(s) 367
AccB1I GGYRCC 3 cut(s) 4, 1247, 2372
AccB7I CCANNNNNTGG 1 cut(s) 2386
AccBSI CCGCTC 2 cut(s) 1994, 2316
AccI GTMKAC 1 cut(s) 341
AccII CGCG 2 cut(s) 207, 1825
AciI CCGC 6 cut(s) 254, 1825, 1992, 2195, 2314, 2558
AclWI GGATC 7 cut(s) 932, 934, 945, 1717, 2060, 2073, 2240
AcoI YGGCCR 1 cut(s) 1804
AcsI RAATTY 7 cut(s) 37, 455, 746, 1202, 2001, 2330, 2473
AcuI CTGAAG 2 cut(s) 1134, 1455
AfaI GTAC 2 cut(s) 520, 2393
AfiI CCNNNNNNNGG 2 cut(s) 835, 2386
AflIII ACRYGT 2 cut(s) 205, 2355
AhdI GACNNNNNGTC 1 cut(s) 1987
AjnI CCWGG 2 cut(s) 475, 1250
AleI CACNNNNGTG 1 cut(s) 2294
AluBI AGCT 5 cut(s) 271, 1161, 1397, 1516, 2039
AluI AGCT 5 cut(s) 271, 1161, 1397, 1516, 2039
Alw21I GWGCWC 3 cut(s) 399, 610, 689
Alw26I GTCTC 4 cut(s) 377, 1315, 1677, 1964
Alw44I GTGCAC 1 cut(s) 685
AlwI GGATC 7 cut(s) 932, 934, 945, 1717, 2060, 2073, 2240
Ama87I CYCGRG 1 cut(s) 2455
AoxI GGCC 5 cut(s) 597, 1029, 1504, 1804, 2448
ApaLI GTGCAC 1 cut(s) 685
ApeKI GCWGC 2 cut(s) 1817, 2165
ApoI RAATTY 7 cut(s) 37, 455, 746, 1202, 2001, 2330, 2473
Asp700I GAANNNNTTC 1 cut(s) 1178
AspLEI GCGC 1 cut(s) 1274
AspS9I GGNCC 5 cut(s) 199, 479, 1029, 1841, 2149
AsuC2I CCSGG 1 cut(s) 1269
AsuHPI GGTGA 3 cut(s) 1363, 1664, 2281
AsuII TTCGAA 1 cut(s) 34
AvaI CYCGRG 1 cut(s) 2455
AvaII GGWCC 4 cut(s) 199, 479, 1841, 2149
BaeGI GKGCMC 1 cut(s) 689
BalI TGGCCA 1 cut(s) 1806
BamHI GGATCC 2 cut(s) 937, 2065
BanI GGYRCC 3 cut(s) 4, 1247, 2372
BarI GAAGNNNNNNTAC 2 cut(s) 1886, 1918
BauI CACGAG 1 cut(s) 1020
BbsI GAAGAC 2 cut(s) 456, 2505
Bbv12I GWGCWC 3 cut(s) 399, 610, 689
BbvI GCAGC 2 cut(s) 1829, 2177
BceAI ACGGC 1 cut(s) 1491
BcgI CGANNNNNNTGC 2 cut(s) 1360, 1394
BciT130I CCWGG 2 cut(s) 477, 1252
BclI TGATCA 1 cut(s) 1390
BcnI CCSGG 1 cut(s) 1269
BcoDI GTCTC 4 cut(s) 377, 1315, 1677, 1964
BfaI CTAG 4 cut(s) 641, 1587, 1950, 2409
BfmI CTRYAG 3 cut(s) 120, 601, 711
BfuAI ACCTGC 1 cut(s) 367
BisI GCNGC 3 cut(s) 1818, 2166, 2559
BlsI GCNGC 3 cut(s) 1819, 2167, 2560
Bme1390I CCNGG 3 cut(s) 477, 1252, 1269
Bme18I GGWCC 4 cut(s) 199, 479, 1841, 2149
BmeRI GACNNNNNGTC 1 cut(s) 1987
BmeT110I CYCGRG 1 cut(s) 2455
BmgT120I GGNCC 5 cut(s) 199, 479, 1029, 1841, 2149
BmrFI CCNGG 3 cut(s) 477, 1252, 1269
BmsI GCATC 5 cut(s) 324, 535, 685, 745, 1829
BpiI GAAGAC 2 cut(s) 456, 2505
BpmI CTGGAG 3 cut(s) 1532, 2302, 2583
Bpu10I CCTNAGC 2 cut(s) 311, 1086
Bpu14I TTCGAA 1 cut(s) 34
BpuEI CTTGAG 2 cut(s) 1213, 1499
BpuMI CCSGG 1 cut(s) 1269
BsaBI GATNNNNATC 1 cut(s) 1881
BsaI GGTCTC 1 cut(s) 1677
BsaJI CCNNGG 9 cut(s) 332, 770, 853, 987, 1251, 1618, 1669, 2050, 2543
BsaWI WCCGGW 1 cut(s) 1843
BsaXI ACNNNNNCTCC 4 cut(s) 1443, 1473, 1830, 1860
Bsc4I CCNNNNNNNGG 2 cut(s) 835, 2386
Bse118I RCCGGY 1 cut(s) 758
Bse1I ACTGG 4 cut(s) 29, 877, 1579, 2300
Bse8I GATNNNNATC 1 cut(s) 1881
BseBI CCWGG 2 cut(s) 477, 1252
BseDI CCNNGG 9 cut(s) 332, 770, 853, 987, 1251, 1618, 1669, 2050, 2543
BseGI GGATG 9 cut(s) 700, 1105, 1222, 1384, 1755, 1761, 1795, 2376, 2578
BseJI GATNNNNATC 1 cut(s) 1881
BseLI CCNNNNNNNGG 2 cut(s) 835, 2386
BseMII CTCAG 3 cut(s) 157, 498, 2484
BseNI ACTGG 4 cut(s) 29, 877, 1579, 2300
BseRI GAGGAG 3 cut(s) 908, 2213, 2216
BseSI GKGCMC 1 cut(s) 689
BseXI GCAGC 2 cut(s) 1829, 2177
Bsh1236I CGCG 2 cut(s) 207, 1825
BshFI GGCC 5 cut(s) 599, 1031, 1506, 1806, 2450
BshNI GGYRCC 3 cut(s) 4, 1247, 2372
BsiHKAI GWGCWC 3 cut(s) 399, 610, 689
BsiHKCI CYCGRG 1 cut(s) 2455
BsiSI CCGG 3 cut(s) 759, 1269, 1844
BslFI GGGAC 9 cut(s) 132, 205, 641, 874, 1585, 1636, 1967, 2162, 2449
BslI CCNNNNNNNGG 2 cut(s) 835, 2386
BsmAI GTCTC 4 cut(s) 377, 1315, 1677, 1964
BsmFI GGGAC 9 cut(s) 132, 205, 641, 874, 1585, 1636, 1967, 2162, 2449
BsnI GGCC 5 cut(s) 599, 1031, 1506, 1806, 2450
Bso31I GGTCTC 1 cut(s) 1677
BsoBI CYCGRG 1 cut(s) 2455
Bsp119I TTCGAA 1 cut(s) 34
Bsp1286I GDGCHC 3 cut(s) 399, 610, 689
Bsp19I CCATGG 1 cut(s) 332
BspACI CCGC 6 cut(s) 254, 1825, 1992, 2195, 2314, 2558
BspANI GGCC 5 cut(s) 599, 1031, 1506, 1806, 2450
BspCNI CTCAG 3 cut(s) 156, 499, 2485
BspFNI CGCG 2 cut(s) 207, 1825
BspHI TCATGA 2 cut(s) 1873, 2229
BspMAI CTGCAG 1 cut(s) 124
BspMI ACCTGC 1 cut(s) 367
BspPI GGATC 7 cut(s) 932, 934, 945, 1717, 2060, 2073, 2240
BspT104I TTCGAA 1 cut(s) 34
BspT107I GGYRCC 3 cut(s) 4, 1247, 2372
BspTNI GGTCTC 1 cut(s) 1677
BsrBI CCGCTC 2 cut(s) 1994, 2316
BsrFI RCCGGY 1 cut(s) 758
BsrI ACTGG 4 cut(s) 29, 877, 1579, 2300
BssAI RCCGGY 1 cut(s) 758
BssECI CCNNGG 9 cut(s) 332, 770, 853, 987, 1251, 1618, 1669, 2050, 2543
BssSI CACGAG 1 cut(s) 1020
BssT1I CCWWGG 7 cut(s) 332, 770, 853, 987, 1618, 2050, 2543
Bst2BI CACGAG 1 cut(s) 1020
Bst2UI CCWGG 2 cut(s) 477, 1252
Bst4CI ACNGT 6 cut(s) 655, 712, 818, 1958, 2190, 2366
Bst6I CTCTTC 4 cut(s) 639, 1318, 1639, 1967
BstBI TTCGAA 1 cut(s) 34
BstC8I GCNNGC 5 cut(s) 797, 1236, 1592, 1827, 1931
BstDEI CTNAG 8 cut(s) 143, 311, 400, 507, 611, 1086, 1626, 2493
BstDSI CCRYGG 2 cut(s) 332, 1669
BstF5I GGATG 9 cut(s) 700, 1105, 1222, 1384, 1755, 1761, 1795, 2376, 2578
BstFNI CGCG 2 cut(s) 207, 1825
BstHHI GCGC 1 cut(s) 1274
BstMAI GTCTC 4 cut(s) 377, 1315, 1677, 1964
BstMWI GCNNNNNNNGC 3 cut(s) 605, 1158, 1826
BstNI CCWGG 2 cut(s) 477, 1252
BstNSI RCATGY 5 cut(s) 1238, 1594, 1747, 2132, 2359
BstSCI CCNGG 3 cut(s) 475, 1250, 1267
BstSFI CTRYAG 3 cut(s) 120, 601, 711
BstSLI GKGCMC 1 cut(s) 689
BstUI CGCG 2 cut(s) 207, 1825
BstV1I GCAGC 2 cut(s) 1829, 2177
BstV2I GAAGAC 2 cut(s) 456, 2505
BstX2I RGATCY 3 cut(s) 926, 937, 2065
BstXI CCANNNNNNTGG 2 cut(s) 283, 2057
BstYI RGATCY 3 cut(s) 926, 937, 2065
BsuRI GGCC 5 cut(s) 599, 1031, 1506, 1806, 2450
BtgI CCRYGG 2 cut(s) 332, 1669
BtgZI GCGATG 2 cut(s) 535, 1806
BtsCI GGATG 9 cut(s) 700, 1105, 1222, 1384, 1755, 1761, 1795, 2376, 2578
BtsI GCAGTG 2 cut(s) 110, 1296
BtsIMutI CAGTG 5 cut(s) 110, 823, 1296, 2130, 2371
BveI ACCTGC 1 cut(s) 367
Cac8I GCNNGC 5 cut(s) 797, 1236, 1592, 1827, 1931
CciI TCATGA 2 cut(s) 1873, 2229
CfoI GCGC 1 cut(s) 1274
Cfr10I RCCGGY 1 cut(s) 758
Cfr13I GGNCC 5 cut(s) 199, 479, 1029, 1841, 2149
CseI GACGC 3 cut(s) 196, 213, 848
CsiI ACCWGGT 1 cut(s) 475
Csp6I GTAC 2 cut(s) 519, 2392
CspCI CAANNNNNGTGG 2 cut(s) 1135, 1170
CviQI GTAC 2 cut(s) 519, 2392
DdeI CTNAG 8 cut(s) 143, 311, 400, 507, 611, 1086, 1626, 2493
DrdI GACNNNNNNGTC 1 cut(s) 2239
DriI GACNNNNNGTC 1 cut(s) 1987
DseDI GACNNNNNNGTC 1 cut(s) 2239
EaeI YGGCCR 1 cut(s) 1804
Eam1104I CTCTTC 4 cut(s) 639, 1318, 1639, 1967
Eam1105I GACNNNNNGTC 1 cut(s) 1987
EarI CTCTTC 4 cut(s) 639, 1318, 1639, 1967
Eco130I CCWWGG 7 cut(s) 332, 770, 853, 987, 1618, 2050, 2543
Eco147I AGGCCT 1 cut(s) 599
Eco31I GGTCTC 1 cut(s) 1677
Eco32I GATATC 1 cut(s) 406
Eco47I GGWCC 4 cut(s) 199, 479, 1841, 2149
Eco57I CTGAAG 2 cut(s) 1134, 1455
Eco88I CYCGRG 1 cut(s) 2455
EcoRII CCWGG 2 cut(s) 475, 1250
EcoRV GATATC 1 cut(s) 406
EcoT14I CCWWGG 7 cut(s) 332, 770, 853, 987, 1618, 2050, 2543
ErhI CCWWGG 7 cut(s) 332, 770, 853, 987, 1618, 2050, 2543
FaqI GGGAC 9 cut(s) 132, 205, 641, 874, 1585, 1636, 1967, 2162, 2449
FauI CCCGC 1 cut(s) 1818
FauNDI CATATG 2 cut(s) 955, 1719
FbaI TGATCA 1 cut(s) 1390
FblI GTMKAC 1 cut(s) 341
Fnu4HI GCNGC 3 cut(s) 1818, 2166, 2559
FokI GGATG 9 cut(s) 707, 1112, 1229, 1371, 1748, 1762, 1782, 2363, 2585
Fsp4HI GCNGC 3 cut(s) 1818, 2166, 2559
FspBI CTAG 4 cut(s) 641, 1587, 1950, 2409
GlaI GCGC 1 cut(s) 1273
GluI GCNGC 3 cut(s) 1818, 2166, 2559
GsuI CTGGAG 3 cut(s) 1532, 2302, 2583
HaeIII GGCC 5 cut(s) 599, 1031, 1506, 1806, 2450
HapII CCGG 3 cut(s) 759, 1269, 1844
HgaI GACGC 3 cut(s) 196, 213, 848
HhaI GCGC 1 cut(s) 1274
Hin6I GCGC 1 cut(s) 1272
HinP1I GCGC 1 cut(s) 1272
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HpaII CCGG 3 cut(s) 759, 1269, 1844
HphI GGTGA 3 cut(s) 1363, 1664, 2281
Hpy166II GTNNAC 5 cut(s) 342, 670, 687, 1462, 2525
Hpy8I GTNNAC 5 cut(s) 342, 670, 687, 1462, 2525
Hpy99I CGWCG 2 cut(s) 207, 1328
HpyAV CCTTC 9 cut(s) 180, 270, 479, 709, 960, 1009, 1168, 1952, 2416
HpyCH4III ACNGT 6 cut(s) 655, 712, 818, 1958, 2190, 2366
HpyCH4IV ACGT 1 cut(s) 1464
HpyCH4V TGCA 9 cut(s) 122, 376, 687, 1289, 1420, 1594, 1602, 1817, 2128
HpyF10VI GCNNNNNNNGC 3 cut(s) 605, 1158, 1826
HpyF3I CTNAG 8 cut(s) 143, 311, 400, 507, 611, 1086, 1626, 2493
HpySE526I ACGT 1 cut(s) 1464
HspAI GCGC 1 cut(s) 1272
Ksp22I TGATCA 1 cut(s) 1390
LmnI GCTCC 6 cut(s) 256, 642, 952, 1513, 2036, 2321
Lsp1109I GCAGC 2 cut(s) 1829, 2177
LweI GCATC 5 cut(s) 324, 535, 685, 745, 1829
MabI ACCWGGT 1 cut(s) 475
MaeI CTAG 4 cut(s) 641, 1587, 1950, 2409
MaeII ACGT 1 cut(s) 1464
MaeIII GTNAC 7 cut(s) 136, 818, 899, 1022, 1294, 1704, 1856
MbiI CCGCTC 2 cut(s) 1994, 2316
MflI RGATCY 3 cut(s) 926, 937, 2065
MhlI GDGCHC 3 cut(s) 399, 610, 689
MlsI TGGCCA 1 cut(s) 1806
MluI ACGCGT 1 cut(s) 205
MluNI TGGCCA 1 cut(s) 1806
MlyI GAGTC 8 cut(s) 856, 1038, 1314, 1371, 1461, 1762, 1853, 2471
MmeI TCCRAC 8 cut(s) 226, 348, 915, 987, 1077, 1789, 1970, 2367
Mox20I TGGCCA 1 cut(s) 1806
MroXI GAANNNNTTC 1 cut(s) 1178
MscI TGGCCA 1 cut(s) 1806
MseI TTAA 5 cut(s) 24, 707, 1206, 1305, 2427
MslI CAYNNNNRTG 6 cut(s) 543, 587, 1284, 1748, 1800, 2294
Msp20I TGGCCA 1 cut(s) 1806
MspI CCGG 3 cut(s) 759, 1269, 1844
MspR9I CCNGG 3 cut(s) 477, 1252, 1269
MvaI CCWGG 2 cut(s) 477, 1252
MvnI CGCG 2 cut(s) 207, 1825
MwoI GCNNNNNNNGC 3 cut(s) 605, 1158, 1826
NciI CCSGG 1 cut(s) 1269
NcoI CCATGG 1 cut(s) 332
NdeI CATATG 2 cut(s) 955, 1719
NmuCI GTSAC 6 cut(s) 136, 818, 899, 1022, 1294, 1856
NspI RCATGY 5 cut(s) 1238, 1594, 1747, 2132, 2359
NspV TTCGAA 1 cut(s) 34
OliI CACNNNNGTG 1 cut(s) 2294
PaeI GCATGC 2 cut(s) 1238, 1594
PaeR7I CTCGAG 1 cut(s) 2455
PagI TCATGA 2 cut(s) 1873, 2229
PaqCI CACCTGC 1 cut(s) 367
PceI AGGCCT 1 cut(s) 599
PciI ACATGT 1 cut(s) 2355
PdmI GAANNNNTTC 1 cut(s) 1178
PfeI GAWTC 2 cut(s) 959, 2536
PflMI CCANNNNNTGG 1 cut(s) 2386
PkrI GCNGC 3 cut(s) 1819, 2167, 2560
PleI GAGTC 8 cut(s) 856, 1038, 1314, 1371, 1460, 1761, 1853, 2470
PpsI GAGTC 8 cut(s) 856, 1038, 1314, 1371, 1460, 1761, 1853, 2470
PscI ACATGT 1 cut(s) 2355
Psp6I CCWGG 2 cut(s) 475, 1250
PspGI CCWGG 2 cut(s) 475, 1250
PspPI GGNCC 5 cut(s) 199, 479, 1029, 1841, 2149
PspXI VCTCGAGB 1 cut(s) 2455
PstI CTGCAG 1 cut(s) 124
PsuI RGATCY 3 cut(s) 926, 937, 2065
RsaI GTAC 2 cut(s) 520, 2393
RsaNI GTAC 2 cut(s) 519, 2392
RseI CAYNNNNRTG 6 cut(s) 543, 587, 1284, 1748, 1800, 2294
SaqAI TTAA 5 cut(s) 24, 707, 1206, 1305, 2427
SatI GCNGC 3 cut(s) 1818, 2166, 2559
Sau96I GGNCC 5 cut(s) 199, 479, 1029, 1841, 2149
SchI GAGTC 8 cut(s) 856, 1038, 1314, 1371, 1461, 1762, 1853, 2471
ScrFI CCNGG 3 cut(s) 477, 1252, 1269
SduI GDGCHC 3 cut(s) 399, 610, 689
SexAI ACCWGGT 1 cut(s) 475
SfaNI GCATC 5 cut(s) 324, 535, 685, 745, 1829
SfcI CTRYAG 3 cut(s) 120, 601, 711
Sfr274I CTCGAG 1 cut(s) 2455
SfuI TTCGAA 1 cut(s) 34
SinI GGWCC 4 cut(s) 199, 479, 1841, 2149
SlaI CTCGAG 1 cut(s) 2455
SmiMI CAYNNNNRTG 6 cut(s) 543, 587, 1284, 1748, 1800, 2294
SmlI CTYRAG 3 cut(s) 1192, 1478, 2455
SmoI CTYRAG 3 cut(s) 1192, 1478, 2455
SphI GCATGC 2 cut(s) 1238, 1594
SseBI AGGCCT 1 cut(s) 599
SsiI CCGC 6 cut(s) 254, 1825, 1992, 2195, 2314, 2558
SspMI CTAG 4 cut(s) 641, 1587, 1950, 2409
StuI AGGCCT 1 cut(s) 599
StyD4I CCNGG 3 cut(s) 475, 1250, 1267
StyI CCWWGG 7 cut(s) 332, 770, 853, 987, 1618, 2050, 2543
TaaI ACNGT 6 cut(s) 655, 712, 818, 1958, 2190, 2366
TaiI ACGT 1 cut(s) 1467
TaqI TCGA 7 cut(s) 34, 72, 543, 1323, 1331, 2280, 2456
TatI WGTACW 1 cut(s) 2391
TauI GCSGC 1 cut(s) 2561
TfiI GAWTC 2 cut(s) 959, 2536
Tru1I TTAA 5 cut(s) 24, 707, 1206, 1305, 2427
Tru9I TTAA 5 cut(s) 24, 707, 1206, 1305, 2427
TscAI CASTG 5 cut(s) 117, 823, 1303, 2130, 2371
TseFI GTSAC 6 cut(s) 136, 818, 899, 1022, 1294, 1856
TseI GCWGC 2 cut(s) 1817, 2165
Tsp45I GTSAC 6 cut(s) 136, 818, 899, 1022, 1294, 1856
TspGWI ACGGA 2 cut(s) 1515, 1658
TspRI CASTG 5 cut(s) 117, 823, 1303, 2130, 2371
Van91I CCANNNNNTGG 1 cut(s) 2386
VneI GTGCAC 1 cut(s) 685
VpaK11BI GGWCC 4 cut(s) 199, 479, 1841, 2149
XapI RAATTY 7 cut(s) 37, 455, 746, 1202, 2001, 2330, 2473
XceI RCATGY 5 cut(s) 1238, 1594, 1747, 2132, 2359
XcmI CCANNNNNNNNNTGG 1 cut(s) 2383
XhoI CTCGAG 1 cut(s) 2455
XmiI GTMKAC 1 cut(s) 341
XmnI GAANNNNTTC 1 cut(s) 1178
XspI CTAG 4 cut(s) 641, 1587, 1950, 2409
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.