Rh1AG249700

Stachyose

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0002202
Physical Location & Seq
Reverse (-)
46394402 .. 46397328
2927 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG249700.1

Sequence Viewer

Length: 2604 bp
ATGGCACCTCCTAATATTCCTGTTAATCCAGTCCCCAATGTTATCCGGTCCGAGAGTTCAGAAAAATACTTTGATTTGTCTGATGGAAAGTTTAATGTCAAAGGTGTTCCATTGCTCTCTGAAGTTCCAAGCAATGTCACCTTTAGTCCTTTTTATTCAATCTGCCAATCCTCTTCTGATGTTCCAACTCATCTGCTCAGCCGTGTCAGTGCCTTGTCCCACAAGGCAGGGTTCCTTGGTTTCAACAAGGAGTCGTCTTCTGATAAGTTGATAAATTCATTGGGAAAATTCGATAACAGGGATTTCCTTAGTATCTTTAGGTTCAAAACATGGTGGTCTACTATGTGGGTTGGGAACTCTGGGTCAGATTTGCAAATGGAAACCCAGTGGGTCCTCCTAAATGTTCCAGAAATCAATTCCTATGTCATAATCATACCCATCATCGATGGCAGTTTTAGATCTGCTTTTCAACCTGGTACTGATGGTCATGTCATGATCTTTGCTGAGAGTGGTTCTACCCAAGTGAAAGCATCGAAGTTTGATGCCATCGCTTATGTTCATGTGTCCGACAATCCCTACACCTTGATGAAAGAGGCCTACAGTGCTCTGAGGGTCCATCTCAATACCTTTAGGCTCCTTGAAGAAAAATCCGCACCAAATCTAGTTGATAAATTTGGTTGGTGCACTTGGGATGCCTTCTACTTAACTGTGGAACCTGTTGGTGTCTCCCATGGTGTAAATGAATTCGTTGAAGCTGGTGTACCCCCAAGGTTTCTCATCATTGATGATGGTTGGCAAAGCATTAATTTCGATGATGATGAGAACCCGAATGAGGATGCGAAGAATCTAGTCATTGGTGGGACTCAAATGACTGCTAGGCTTCACAGGCTTGAGGAGTGTGACAAGTTCAAAAACTACAAAGGTGGATCTTTACTGGGTCCTCATGCACCTTCATTTGATCCAAAAAGGCCAAAGATGTTGATATCCAAGGCAATTGAATTAGAGAATGTTGAAAAGGCTCGTGATAAGGCCATTCAATCTGGAGTCACTGATTTGTCCGAGTTCCAAAAACAAATGCAGAAGCATAAGCAAGAGTTGGATATGATAATTGGTGGTGGAGAAGAAGGCAGTGTTTCAAAAGAAGGAAGCTGTAGAAGCTGTTCTTGCAAGGCTAAAAATTATGGAATGAAGTCTTTCACATGCGACTTGAGAACCAAGTTCAAGAATTTGGATGATATTTATGTATGGCATGCTCTTTGTGGTGCCTGGGGTGGTGTTAAACCAGGTACAACTCATCTCAATTCAAAGATCATCCCCTGCAAAGTCTCTCCAGGACTAGATGGTTCCATGTCTGACCTAGCTGTGGTGAAACTAGTTGAGGGTGGGATTGGACTTGTCCATCCTGATCAAGCTGGTGATTTCTATAATTCTATGCACTCTTACCTTTCTGAAGCTGGTATCACAGGAGTCAAAGTGGATACTCTCGAATATGTATCTGAGGAATTCGGAGGCCGTGTTGAGCTTGCAAAGGCTTATTACAAGGGGCTGACTTCTTCTCTTGTAAAGAACTTCAATGGAACTGGACTTATTGCTAGCATGCAACAATGCAATGATTTCTTCTTCCTTGGAACAAAACAAATCTCTATTGGAAGAGTTGGTGATGATTTTTGGTTTCAGGATCCAAATGGAGACCCCATGGGAGTTTACTGGCTACAAGGTGTCCATATGATCCATTGTGCCTACAACAGCATGTGGATGGGTCAATTCATTCAGCCTGATTGGGATATGTTCCAGTCAGATCATCTGTGTGCCAAATTTCATGCCGGATCTAGGGCTATATGTGGAGGTCCGGTGTATATAAGTGACTCGGTTGGTGGTCACAATTTTGATCTTATTAGGCAGCTTGTTTACCCAGATGGTACCATCCCCAAGTGCCAGCATTTTGCTCTTCCAACTAGGGACTGCCTATTCAAGAACCCCTTATTTGACAGCAAGACTGCTCTCAAAATTTGGAATGTCAACAAGTTTGGTGGTGTGATGGGAGCTTTCAACTGCCAAGGGGCTGGTTGGGACCTTAAAGAAAAGAGAATCAAAGGCTACTCCCAGTGCTACAAGGAAATCCTCTATTCAGTGCATGTTTCTGAAATTGAATGGGACCAAAAGATGGAAGCCGCCCATTTGGGTAAGGCCGAAGAATATGTGGTCTATCTCAACCAGGCCAATGAACTCTTCCAAATGACCCCCAAATCCGATCCCATTCAAATGGTGATCCAACCATCTTCGTTCGAGATTTTCAGCGTCGTGCCAGTACAAAAGCTCGGCTCCAACAACACCAAGTTTGCGCCGATTGGACTGACAAACATGTTCAACAGTGGAGGCACTATCCAAGAGCTGGAGTATACAAGTGGCATGGAATCTTATAAAGCAAAGATCAAGGTTAAAGGTGGAGGCAACTTCTTGGCCTACTCAAGTCAGTCTCCGAAGAAGTGTTGTTTGAATGGTGCTGTAGTGACTTTTGAGTGGTCTGCTTCTGGTAAACTGTCCCTGAATCTTCCTTGGGTTGAAGAAGCTGCTGGAATTTCTGATGTCGTTCTTGTGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0006950 GO:0006979 GO:0008150 GO:0008378 GO:0009628 GO:0016740 GO:0016757 GO:0016758 GO:0047268 GO:0050896 GO:0080167
KEGG Pathways
Metabolic & Signaling
ko00052 map00052
Pfam Domains
Protein Families
Raffinose_syn

Protein Analysis

867

Amino Acids

96.12

Weight (kDa)

5.94

Isoelectric Point (pI)

36.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Raffinose_syn PF05691 24 - 850 0.0 Raffinose synthase or seed imbibition protein Sip1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2421
Acc65I GGTACC 1 cut(s) 1919
AccB1I GGYRCC 3 cut(s) 4, 1262, 1919
AccB7I CCANNNNNTGG 2 cut(s) 2164, 2392
AccI GTMKAC 2 cut(s) 338, 2399
AciI CCGC 2 cut(s) 651, 2172
AclWI GGATC 8 cut(s) 934, 953, 1673, 1686, 1723, 1834, 2246, 2263
AcsI RAATTY 9 cut(s) 274, 287, 671, 743, 1225, 1502, 1814, 2007, 2577
AcuI CTGAAG 2 cut(s) 141, 1470
AfaI GTAC 5 cut(s) 478, 762, 1288, 1921, 2310
AfiI CCNNNNNNNGG 5 cut(s) 832, 1363, 1830, 2164, 2392
AflIII ACRYGT 1 cut(s) 2361
AhlI ACTAGT 1 cut(s) 1372
AjnI CCWGG 5 cut(s) 472, 1265, 1282, 1330, 2214
AjuI GAANNNNNNNTTGG 2 cut(s) 2213, 2245
Alw21I GWGCWC 2 cut(s) 607, 686
Alw26I GTCTC 4 cut(s) 730, 1330, 1683, 2481
Alw44I GTGCAC 1 cut(s) 682
AlwI GGATC 8 cut(s) 934, 953, 1673, 1686, 1723, 1834, 2246, 2263
AoxI GGCC 7 cut(s) 594, 968, 1029, 1510, 2187, 2217, 2460
ApaLI GTGCAC 1 cut(s) 682
ApeKI GCWGC 2 cut(s) 1900, 2570
ApoI RAATTY 9 cut(s) 274, 287, 671, 743, 1225, 1502, 1814, 2007, 2577
AseI ATTAAT 1 cut(s) 804
Asp700I GAANNNNTTC 2 cut(s) 1159, 1193
Asp718I GGTACC 1 cut(s) 1919
AspLEI GCGC 1 cut(s) 2344
AspS9I GGNCC 7 cut(s) 48, 391, 613, 938, 1847, 2071, 2155
AsuHPI GGTGA 5 cut(s) 130, 1378, 1427, 1670, 2278
AsuNHI GCTAGC 1 cut(s) 1592
AvaII GGWCC 7 cut(s) 48, 391, 613, 938, 1847, 2071, 2155
BaeGI GKGCMC 1 cut(s) 686
BamHI GGATCC 1 cut(s) 1678
BanI GGYRCC 3 cut(s) 4, 1262, 1919
BarI GAAGNNNNNNTAC 2 cut(s) 744, 776
BauI CACGAG 1 cut(s) 1020
BbsI GAAGAC 1 cut(s) 249
Bbv12I GWGCWC 2 cut(s) 607, 686
BbvI GCAGC 2 cut(s) 1912, 2557
BceAI ACGGC 2 cut(s) 186, 1497
BcgI CGANNNNNNTGC 2 cut(s) 790, 824
BciT130I CCWGG 5 cut(s) 474, 1267, 1284, 1332, 2216
BciVI GTATCC 1 cut(s) 1471
BclI TGATCA 1 cut(s) 1405
BcoDI GTCTC 4 cut(s) 730, 1330, 1683, 2481
BcuI ACTAGT 1 cut(s) 1372
BfaI CTAG 9 cut(s) 662, 848, 876, 1337, 1358, 1373, 1593, 1830, 1956
BfmI CTRYAG 3 cut(s) 598, 1150, 2505
BfuI GTATCC 1 cut(s) 1471
BglII AGATCT 1 cut(s) 458
BisI GCNGC 3 cut(s) 1901, 2172, 2571
BlpI GCTNAGC 1 cut(s) 197
BlsI GCNGC 3 cut(s) 1902, 2173, 2572
Bme1390I CCNGG 5 cut(s) 474, 1267, 1284, 1332, 2216
Bme18I GGWCC 7 cut(s) 48, 391, 613, 938, 1847, 2071, 2155
BmgT120I GGNCC 7 cut(s) 48, 391, 613, 938, 1847, 2071, 2155
BmrFI CCNGG 5 cut(s) 474, 1267, 1284, 1332, 2216
BmrI ACTGGG 3 cut(s) 379, 944, 2098
BmsI GCATC 4 cut(s) 532, 539, 682, 826
BmtI GCTAGC 1 cut(s) 1596
BmuI ACTGGG 3 cut(s) 379, 944, 2098
BpiI GAAGAC 1 cut(s) 249
BpmI CTGGAG 3 cut(s) 1062, 1314, 2414
Bpu1102I GCTNAGC 1 cut(s) 197
BpuEI CTTGAG 3 cut(s) 911, 1228, 2452
Bsa29I ATCGAT 1 cut(s) 444
BsaI GGTCTC 1 cut(s) 1683
BsaJI CCNNGG 9 cut(s) 235, 730, 767, 987, 1266, 1624, 1695, 2056, 2555
BsaWI WCCGGW 2 cut(s) 45, 1849
BsaXI ACNNNNNCTCC 6 cut(s) 1458, 1488, 1500, 1530, 1836, 1866
Bsc4I CCNNNNNNNGG 5 cut(s) 832, 1363, 1830, 2164, 2392
Bse1I ACTGG 8 cut(s) 29, 385, 939, 1585, 1712, 1792, 2104, 2306
Bse3DI GCAATG 3 cut(s) 110, 139, 1615
BseBI CCWGG 5 cut(s) 474, 1267, 1284, 1332, 2216
BseCI ATCGAT 1 cut(s) 444
BseDI CCNNGG 9 cut(s) 235, 730, 767, 987, 1266, 1624, 1695, 2056, 2555
BseGI GGATG 7 cut(s) 697, 841, 1237, 1311, 1399, 1761, 1923
BseLI CCNNNNNNNGG 5 cut(s) 832, 1363, 1830, 2164, 2392
BseMI GCAATG 3 cut(s) 110, 139, 1615
BseMII CTCAG 4 cut(s) 211, 495, 599, 1488
BseNI ACTGG 8 cut(s) 29, 385, 939, 1585, 1712, 1792, 2104, 2306
BseRI GAGGAG 1 cut(s) 908
BseSI GKGCMC 1 cut(s) 686
BseXI GCAGC 2 cut(s) 1912, 2557
BshFI GGCC 7 cut(s) 596, 970, 1031, 1512, 2189, 2219, 2462
BshNI GGYRCC 3 cut(s) 4, 1262, 1919
BshVI ATCGAT 1 cut(s) 444
BsiHKAI GWGCWC 2 cut(s) 607, 686
BsiSI CCGG 3 cut(s) 46, 1824, 1850
BslFI GGGAC 7 cut(s) 17, 202, 874, 1973, 2084, 2168, 2527
BslI CCNNNNNNNGG 5 cut(s) 832, 1363, 1830, 2164, 2392
BsmAI GTCTC 4 cut(s) 730, 1330, 1683, 2481
BsmFI GGGAC 7 cut(s) 17, 202, 874, 1973, 2084, 2168, 2527
BsnI GGCC 7 cut(s) 596, 970, 1031, 1512, 2189, 2219, 2462
Bso31I GGTCTC 1 cut(s) 1683
Bsp1286I GDGCHC 2 cut(s) 607, 686
Bsp1720I GCTNAGC 1 cut(s) 197
Bsp19I CCATGG 2 cut(s) 730, 1695
BspACI CCGC 2 cut(s) 651, 2172
BspANI GGCC 7 cut(s) 596, 970, 1031, 1512, 2189, 2219, 2462
BspCNI CTCAG 4 cut(s) 210, 496, 600, 1489
BspDI ATCGAT 1 cut(s) 444
BspHI TCATGA 1 cut(s) 492
BspOI GCTAGC 1 cut(s) 1596
BspPI GGATC 8 cut(s) 934, 953, 1673, 1686, 1723, 1834, 2246, 2263
BspQI GCTCTTC 1 cut(s) 1953
BspT107I GGYRCC 3 cut(s) 4, 1262, 1919
BspTNI GGTCTC 1 cut(s) 1683
BsrDI GCAATG 3 cut(s) 110, 139, 1615
BsrI ACTGG 8 cut(s) 29, 385, 939, 1585, 1712, 1792, 2104, 2306
BssECI CCNNGG 9 cut(s) 235, 730, 767, 987, 1266, 1624, 1695, 2056, 2555
BssNAI GTATAC 1 cut(s) 2400
BssSI CACGAG 1 cut(s) 1020
BssT1I CCWWGG 8 cut(s) 235, 730, 767, 987, 1624, 1695, 2056, 2555
Bst1107I GTATAC 1 cut(s) 2400
Bst2BI CACGAG 1 cut(s) 1020
Bst2UI CCWGG 5 cut(s) 474, 1267, 1284, 1332, 2216
Bst4CI ACNGT 4 cut(s) 602, 709, 2372, 2541
Bst6I CTCTTC 4 cut(s) 178, 1645, 1953, 2234
BstC8I GCNNGC 5 cut(s) 1251, 1524, 1594, 1598, 1937
BstDEI CTNAG 5 cut(s) 197, 308, 504, 608, 1497
BstDSI CCRYGG 2 cut(s) 730, 1695
BstF5I GGATG 7 cut(s) 697, 841, 1237, 1311, 1399, 1761, 1923
BstHHI GCGC 1 cut(s) 2344
BstMAI GTCTC 4 cut(s) 730, 1330, 1683, 2481
BstMWI GCNNNNNNNGC 4 cut(s) 602, 886, 1155, 1164
BstNI CCWGG 5 cut(s) 474, 1267, 1284, 1332, 2216
BstNSI RCATGY 6 cut(s) 1203, 1253, 1600, 1753, 2138, 2365
BstSCI CCNGG 5 cut(s) 472, 1265, 1282, 1330, 2214
BstSFI CTRYAG 3 cut(s) 598, 1150, 2505
BstSLI GKGCMC 1 cut(s) 686
BstV1I GCAGC 2 cut(s) 1912, 2557
BstV2I GAAGAC 1 cut(s) 249
BstX2I RGATCY 4 cut(s) 458, 926, 1678, 1826
BstXI CCANNNNNNTGG 2 cut(s) 2063, 2263
BstYI RGATCY 4 cut(s) 458, 926, 1678, 1826
BstZ17I GTATAC 1 cut(s) 2400
Bsu15I ATCGAT 1 cut(s) 444
BsuI GTATCC 1 cut(s) 1471
BsuRI GGCC 7 cut(s) 596, 970, 1031, 1512, 2189, 2219, 2462
BsuTUI ATCGAT 1 cut(s) 444
BtgI CCRYGG 2 cut(s) 730, 1695
BtgZI GCGATG 1 cut(s) 532
BtsCI GGATG 7 cut(s) 697, 841, 1237, 1311, 1399, 1761, 1923
BtsI GCAGTG 1 cut(s) 1135
BtsIMutI CAGTG 8 cut(s) 214, 392, 607, 1047, 1135, 2111, 2136, 2377
Cac8I GCNNGC 5 cut(s) 1251, 1524, 1594, 1598, 1937
CciI TCATGA 1 cut(s) 492
CfoI GCGC 1 cut(s) 2344
Cfr13I GGNCC 7 cut(s) 48, 391, 613, 938, 1847, 2071, 2155
ClaI ATCGAT 1 cut(s) 444
CpoI CGGWCCG 1 cut(s) 48
CseI GACGC 1 cut(s) 2287
CsiI ACCWGGT 2 cut(s) 472, 1282
Csp6I GTAC 5 cut(s) 477, 761, 1287, 1920, 2309
CspCI CAANNNNNGTGG 2 cut(s) 2011, 2046
CspI CGGWCCG 1 cut(s) 48
CviQI GTAC 5 cut(s) 477, 761, 1287, 1920, 2309
DdeI CTNAG 5 cut(s) 197, 308, 504, 608, 1497
Eam1104I CTCTTC 4 cut(s) 178, 1645, 1953, 2234
EarI CTCTTC 4 cut(s) 178, 1645, 1953, 2234
Eco130I CCWWGG 8 cut(s) 235, 730, 767, 987, 1624, 1695, 2056, 2555
Eco147I AGGCCT 1 cut(s) 596
Eco31I GGTCTC 1 cut(s) 1683
Eco32I GATATC 1 cut(s) 984
Eco47I GGWCC 7 cut(s) 48, 391, 613, 938, 1847, 2071, 2155
Eco57I CTGAAG 2 cut(s) 141, 1470
EcoO109I RGGNCCY 3 cut(s) 391, 938, 2071
EcoRI GAATTC 2 cut(s) 743, 1502
EcoRII CCWGG 5 cut(s) 472, 1265, 1282, 1330, 2214
EcoRV GATATC 1 cut(s) 984
EcoT14I CCWWGG 8 cut(s) 235, 730, 767, 987, 1624, 1695, 2056, 2555
ErhI CCWWGG 8 cut(s) 235, 730, 767, 987, 1624, 1695, 2056, 2555
FalI AAGNNNNNCTT 4 cut(s) 1147, 1179, 1964, 1996
FaqI GGGAC 7 cut(s) 17, 202, 874, 1973, 2084, 2168, 2527
FauNDI CATATG 1 cut(s) 1725
FbaI TGATCA 1 cut(s) 1405
FblI GTMKAC 2 cut(s) 338, 2399
Fnu4HI GCNGC 3 cut(s) 1901, 2172, 2571
FokI GGATG 7 cut(s) 704, 848, 1244, 1298, 1386, 1768, 1910
Fsp4HI GCNGC 3 cut(s) 1901, 2172, 2571
FspBI CTAG 9 cut(s) 662, 848, 876, 1337, 1358, 1373, 1593, 1830, 1956
GlaI GCGC 1 cut(s) 2343
GluI GCNGC 3 cut(s) 1901, 2172, 2571
GsuI CTGGAG 3 cut(s) 1062, 1314, 2414
HaeIII GGCC 7 cut(s) 596, 970, 1031, 1512, 2189, 2219, 2462
HapII CCGG 3 cut(s) 46, 1824, 1850
HgaI GACGC 1 cut(s) 2287
HhaI GCGC 1 cut(s) 2344
Hin6I GCGC 1 cut(s) 2342
HinP1I GCGC 1 cut(s) 2342
HincII GTYRAC 1 cut(s) 2020
HindII GTYRAC 1 cut(s) 2020
HinfI GANTC 9 cut(s) 251, 844, 862, 1044, 1467, 1865, 2088, 2414, 2548
HpaII CCGG 3 cut(s) 46, 1824, 1850
HphI GGTGA 5 cut(s) 130, 1378, 1427, 1670, 2278
Hpy166II GTNNAC 8 cut(s) 339, 684, 761, 1705, 1909, 2020, 2400, 2537
Hpy8I GTNNAC 8 cut(s) 339, 684, 761, 1705, 1909, 2020, 2400, 2537
Hpy99I CGWCG 1 cut(s) 2303
HpyAV CCTTC 4 cut(s) 706, 960, 1118, 1136
HpyCH4III ACNGT 4 cut(s) 602, 709, 2372, 2541
HpyF10VI GCNNNNNNNGC 4 cut(s) 602, 886, 1155, 1164
HpyF3I CTNAG 5 cut(s) 197, 308, 504, 608, 1497
HspAI GCGC 1 cut(s) 2342
KpnI GGTACC 1 cut(s) 1923
Ksp22I TGATCA 1 cut(s) 1405
LguI GCTCTTC 1 cut(s) 1953
LmnI GCTCC 3 cut(s) 639, 2042, 2327
Lsp1109I GCAGC 2 cut(s) 1912, 2557
LweI GCATC 4 cut(s) 532, 539, 682, 826
MabI ACCWGGT 2 cut(s) 472, 1282
MaeI CTAG 9 cut(s) 662, 848, 876, 1337, 1358, 1373, 1593, 1830, 1956
MaeIII GTNAC 6 cut(s) 136, 899, 1045, 1862, 1877, 2509
MfeI CAATTG 1 cut(s) 993
MflI RGATCY 4 cut(s) 458, 926, 1678, 1826
MhlI GDGCHC 2 cut(s) 607, 686
MlyI GAGTC 5 cut(s) 260, 856, 1053, 1476, 1859
MmeI TCCRAC 6 cut(s) 209, 591, 1077, 1976, 2296, 2349
MroXI GAANNNNTTC 2 cut(s) 1159, 1193
MseI TTAA 7 cut(s) 24, 93, 704, 804, 1278, 2076, 2439
MslI CAYNNNNRTG 4 cut(s) 584, 1754, 1806, 2261
MspI CCGG 3 cut(s) 46, 1824, 1850
MspR9I CCNGG 5 cut(s) 474, 1267, 1284, 1332, 2216
MunI CAATTG 1 cut(s) 993
MvaI CCWGG 5 cut(s) 474, 1267, 1284, 1332, 2216
MwoI GCNNNNNNNGC 4 cut(s) 602, 886, 1155, 1164
NcoI CCATGG 2 cut(s) 730, 1695
NdeI CATATG 1 cut(s) 1725
NheI GCTAGC 1 cut(s) 1592
NmeAIII GCCGAG 1 cut(s) 2298
NmuCI GTSAC 6 cut(s) 136, 899, 1045, 1862, 1877, 2509
NspI RCATGY 6 cut(s) 1203, 1253, 1600, 1753, 2138, 2365
PaeI GCATGC 2 cut(s) 1253, 1600
PagI TCATGA 1 cut(s) 492
PceI AGGCCT 1 cut(s) 596
PciI ACATGT 1 cut(s) 2361
PciSI GCTCTTC 1 cut(s) 1953
PdmI GAANNNNTTC 2 cut(s) 1159, 1193
PfeI GAWTC 4 cut(s) 844, 2088, 2414, 2548
PflMI CCANNNNNTGG 2 cut(s) 2164, 2392
PfoI TCCNGGA 1 cut(s) 1330
PkrI GCNGC 3 cut(s) 1902, 2173, 2572
PleI GAGTC 5 cut(s) 259, 856, 1052, 1475, 1859
PpsI GAGTC 5 cut(s) 259, 856, 1052, 1475, 1859
PpuMI RGGWCCY 3 cut(s) 391, 938, 2071
PscI ACATGT 1 cut(s) 2361
PshBI ATTAAT 1 cut(s) 804
PsiI TTATAA 1 cut(s) 2421
Psp5II RGGWCCY 3 cut(s) 391, 938, 2071
Psp6I CCWGG 5 cut(s) 472, 1265, 1282, 1330, 2214
PspGI CCWGG 5 cut(s) 472, 1265, 1282, 1330, 2214
PspPI GGNCC 7 cut(s) 48, 391, 613, 938, 1847, 2071, 2155
PspPPI RGGWCCY 3 cut(s) 391, 938, 2071
PsrI GAACNNNNNNTAC 2 cut(s) 1144, 1176
PsuI RGATCY 4 cut(s) 458, 926, 1678, 1826
RsaI GTAC 5 cut(s) 478, 762, 1288, 1921, 2310
RsaNI GTAC 5 cut(s) 477, 761, 1287, 1920, 2309
RseI CAYNNNNRTG 4 cut(s) 584, 1754, 1806, 2261
Rsr2I CGGWCCG 1 cut(s) 48
RsrII CGGWCCG 1 cut(s) 48
SapI GCTCTTC 1 cut(s) 1953
SaqAI TTAA 7 cut(s) 24, 93, 704, 804, 1278, 2076, 2439
SatI GCNGC 3 cut(s) 1901, 2172, 2571
Sau96I GGNCC 7 cut(s) 48, 391, 613, 938, 1847, 2071, 2155
SchI GAGTC 5 cut(s) 260, 856, 1053, 1476, 1859
ScrFI CCNGG 5 cut(s) 474, 1267, 1284, 1332, 2216
SduI GDGCHC 2 cut(s) 607, 686
SexAI ACCWGGT 2 cut(s) 472, 1282
SfaNI GCATC 4 cut(s) 532, 539, 682, 826
SfcI CTRYAG 3 cut(s) 598, 1150, 2505
SinI GGWCC 7 cut(s) 48, 391, 613, 938, 1847, 2071, 2155
SmiMI CAYNNNNRTG 4 cut(s) 584, 1754, 1806, 2261
SmlI CTYRAG 3 cut(s) 890, 1207, 2467
SmoI CTYRAG 3 cut(s) 890, 1207, 2467
SpeI ACTAGT 1 cut(s) 1372
SphI GCATGC 2 cut(s) 1253, 1600
SseBI AGGCCT 1 cut(s) 596
SsiI CCGC 2 cut(s) 651, 2172
SspI AATATT 1 cut(s) 16
SspMI CTAG 9 cut(s) 662, 848, 876, 1337, 1358, 1373, 1593, 1830, 1956
StuI AGGCCT 1 cut(s) 596
StyD4I CCNGG 5 cut(s) 472, 1265, 1282, 1330, 2214
StyI CCWWGG 8 cut(s) 235, 730, 767, 987, 1624, 1695, 2056, 2555
TaaI ACNGT 4 cut(s) 602, 709, 2372, 2541
TaqI TCGA 6 cut(s) 291, 444, 533, 810, 1485, 2286
TatI WGTACW 1 cut(s) 2308
TauI GCSGC 1 cut(s) 2174
TfiI GAWTC 4 cut(s) 844, 2088, 2414, 2548
Tru1I TTAA 7 cut(s) 24, 93, 704, 804, 1278, 2076, 2439
Tru9I TTAA 7 cut(s) 24, 93, 704, 804, 1278, 2076, 2439
TscAI CASTG 8 cut(s) 214, 392, 607, 1054, 1135, 2111, 2136, 2377
TseFI GTSAC 6 cut(s) 136, 899, 1045, 1862, 1877, 2509
TseI GCWGC 2 cut(s) 1900, 2570
Tsp45I GTSAC 6 cut(s) 136, 899, 1045, 1862, 1877, 2509
TspDTI ATGAA 9 cut(s) 267, 548, 602, 756, 942, 1202, 1756, 1808, 2238
TspRI CASTG 8 cut(s) 214, 392, 607, 1054, 1135, 2111, 2136, 2377
Van91I CCANNNNNTGG 2 cut(s) 2164, 2392
VneI GTGCAC 1 cut(s) 682
VpaK11BI GGWCC 7 cut(s) 48, 391, 613, 938, 1847, 2071, 2155
VspI ATTAAT 1 cut(s) 804
XapI RAATTY 9 cut(s) 274, 287, 671, 743, 1225, 1502, 1814, 2007, 2577
XceI RCATGY 6 cut(s) 1203, 1253, 1600, 1753, 2138, 2365
XmiI GTMKAC 2 cut(s) 338, 2399
XmnI GAANNNNTTC 2 cut(s) 1159, 1193
XspI CTAG 9 cut(s) 662, 848, 876, 1337, 1358, 1373, 1593, 1830, 1956
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.