Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002270.1

Orthogroup ID

OG0002202

Physical Location & Seq

Genomic Coordinates Reverse (-)

46606 .. 49484

Gene Structure 2879 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002270.1_g000014.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2598 bp

atggcaccccctaatgaacctgttaatccaattcgaaatttgttccattgtgcgagttcggaactctacttcgacttgtctgatggaaagttgagtgtgaaaggtgttccattgctctctgaagttccaaccaatgtcactctcagtccctttcattcaatctgccaaccttcttgttctgatgttccatctcatctggtccgacacgtctgtgccttgtcccacaaggcagggtttcttgggttcaataaggaggaaccttctgataagttgaccaactccttgggtaggttcagtaacagggatttccttagcatctttaggttcaaaccatggtggtctaccatgtgggttgggaagtctgggtcggatttgcaggtggagacacaatgggtgctcttagatatccctgaaatcaagtcctatgtcataatcataccgatcattgaagacaaattcaggtctgctcttctacctggtcctgatggacgtgtcattgtctttgctgagagtggttgtaccaaagtgaaaacttcatattttgatgccatcgcttatgttcatgcttctgataatccctacaccttgatgaaagaggcctatagtgctcttagggttcatctcaatacctttaggctcctagaagagaaaacagtcccaagtttagttgacaagtttggttggtgcacttgggatgccttctatttaactgtagaacctgttggtgttttccatggggtcaaggaatttgttgaagccggtgttcccccaaggtttatcatcattgatgatggctggcaaagtatcaattttgacagtgacgaaagcccgaatgaggacgcacatctaatccttggtgggactcaaatgactggtaggcttcacaggtttgaggagtgtgacaagtttaggaactacaaaggaggatctttgttggatcctaacgctccttcatatgattccaacaggcagaagaagttgatagccaaggcacttgaagttgaggatattgagaaggctcgtgacagggccactcaatcaggagtcactgatttgtccgagttcaaaacacaatggcagaagcctaagcaagagttggatgtgatgattgctgaagaagaaaaaattagtggttctgcttctaccaatggctgtggaagctatggtggaatgaaggctttcacaagcgacttgagaaccaaatataagggtttggatgatatttatgtatggcatgctctttgtggtgcctggggtggtgtaaagcccggcgcaacccatctcaatgcaaaggtcactgctgttaatgtctcttctggactcgacgggtcgatgactgatcttgctgtggtgaaactcatagagggtggcattggacttgttcatcctgatcaagctgacgatttcttcaattctatgcactcctatctttctgaagttggtataacaggagtcaaagtggacgttattcatagtcttgagtttttaggtgaggaacacggaggccgtctggagcttccaaaggcatattacaaggggcttacttcttcccttgtaaataacttcaatgggactggacttatttctagcatgcaacaatgcaatgacttcttcttccttgggactaagcaaatctctattggaagagttggtgatgacttttggttccgtggtggagatggagaccctgtggcagtttattggttacaaggagttcatatgatccattgtgcttacaacagcatgtggatgagtcagttcatccaacctgattgggatatgttccaatcagaacatccatgtggccaatttcatgcagcatcgcgggcaatatgtggaggtccggtgtatgtgagtgactcgcttgattgccatgattttgatctcatcaagaagtttgcttacccagatggaaccattcccaagtgccagcattttgcccttccaactagggactgtctattcaaaaaccctttgaatgacagcaagtccgctctcaaaatttggaacttgaacaagtatgctggtgtcattggagctttcaactgccaaggggctggttgggatccaaaagagcaaaagatcagaggctatcccgaatgctatgaggaaatccattgttcagtgcatgtttctgaaattgagtgggaccaaaagaaagaagcagccaatttgggcaaggctgaacagtatgtggtctatctcaaccagactgatgaactcctcctcatgacccccaagtctgatccaattcaaatcacaatcaaaccatcttcgttcgagattttcacctttgtgccagttcaaaatctccgctccagcagcactaaattctcgcctattggactgaccaacatgttcaacagtggaggcaccatccaagagttggagtacattactagttcggtttcttctagtgtcaagatgaaggttaaaggtggaggcaatttctcggcctactctagtgaatccccaaagaatttctgtttgaatggtgctgaggtggattttgagtggtcttcctgtggtaaactgaccctgaatcttccttgggttgaagaagctgctggagtttcggatgtggttttggtgttttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0006950 GO:0006979 GO:0008150 GO:0008378 GO:0009628 GO:0016740 GO:0016757 GO:0016758 GO:0047268 GO:0050896 GO:0080167

KEGG Pathways

Metabolic & Signaling

ko00052 map00052

Pfam Domains

Protein Families

Raffinose_syn

Protein Analysis

865

Amino Acids

96.06

Weight (kDa)

5.42

Isoelectric Point (pI)

35.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002202)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G01970 AT4G01970
fragaria_vesca	FvH4_1g27000 FvH4_7g13680
malus_domestica	MD09G1285100.v1.1 MD15G1191100.v1.1
prunus_persica	Prupe.3G008900_v2.0.a1 Prupe.7G226100_v2.0.a1
pyrus_communis	pycom09g19250
rosa_chinensis	RchiOBHm_Chr1g0353751 RchiOBHm_Chr2g0091201 RchiOBHm_Chr3g0487291 RchiOBHm_Chr3g0487311
rosa_laevigata	RLG00000016191 RLG00000023016 RLG00000023018 RLG00000028260
rosa_multiflora	Rmu_co8130058.1_g000001 Rmu_sc0002270.1_g000014 Rmu_sc0021704.1_g000002 Rmu_sc0033684.1_g000007
rosa_roxburghii	Rroxscaffold_2G00150390 Rroxscaffold_4G00301680 Rroxscaffold_6G00394920 Rroxscaffold_6G00394970
rosa_rugosa	Rorug01G0237700 Rorug02G0014400 Rorug03G0232800
rosa_samantha	Rh1AG249700 Rh1BG219900 Rh1CG232300 Rh1DG246900 Rh2BG058900 Rh2CG060700 Rh3AG280600 Rh3AG280800 Rh3BG316500 Rh3CG314700 Rh3DG312500
rosa_wichuraiana	Rw1G021790 Rw2G004970 Rw3G024860 Rw3G024890

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	367
AasI	GACNNNNNNGTC	1 cut(s)	2239
Acc36I	ACCTGC	1 cut(s)	367
AccB1I	GGYRCC	3 cut(s)	4, 1247, 2372
AccB7I	CCANNNNNTGG	1 cut(s)	2386
AccBSI	CCGCTC	2 cut(s)	1994, 2316
AccI	GTMKAC	1 cut(s)	341
AccII	CGCG	1 cut(s)	1825
AciI	CCGC	3 cut(s)	1825, 1992, 2314
AclWI	GGATC	7 cut(s)	932, 934, 945, 1717, 2060, 2073, 2240
AcoI	YGGCCR	1 cut(s)	1804
AcsI	RAATTY	6 cut(s)	37, 455, 746, 2001, 2330, 2479
AcuI	CTGAAG	3 cut(s)	141, 1134, 1455
AfaI	GTAC	2 cut(s)	520, 2393
AfiI	CCNNNNNNNGG	3 cut(s)	288, 835, 2386
AflIII	ACRYGT	3 cut(s)	205, 490, 2355
AhdI	GACNNNNNGTC	1 cut(s)	1987
AhlI	ACTAGT	1 cut(s)	2399
AjiI	CACGTC	2 cut(s)	208, 491
AjnI	CCWGG	2 cut(s)	475, 1250
AleI	CACNNNNGTG	2 cut(s)	210, 2294
AluBI	AGCT	5 cut(s)	1161, 1397, 1516, 2039, 2564
AluI	AGCT	5 cut(s)	1161, 1397, 1516, 2039, 2564
Alw21I	GWGCWC	3 cut(s)	399, 610, 689
Alw26I	GTCTC	3 cut(s)	377, 1315, 1677
Alw44I	GTGCAC	1 cut(s)	685
AlwI	GGATC	7 cut(s)	932, 934, 945, 1717, 2060, 2073, 2240
AoxI	GGCC	5 cut(s)	597, 1029, 1504, 1804, 2454
ApaLI	GTGCAC	1 cut(s)	685
ApeKI	GCWGC	4 cut(s)	1817, 2165, 2322, 2564
ApoI	RAATTY	6 cut(s)	37, 455, 746, 2001, 2330, 2479
Asp700I	GAANNNNTTC	1 cut(s)	1178
AspLEI	GCGC	1 cut(s)	1274
AspS9I	GGNCC	5 cut(s)	199, 479, 1029, 1841, 2149
AsuC2I	CCSGG	1 cut(s)	1269
AsuHPI	GGTGA	4 cut(s)	1363, 1502, 1664, 2281
AsuII	TTCGAA	1 cut(s)	34
AvaII	GGWCC	4 cut(s)	199, 479, 1841, 2149
BaeGI	GKGCMC	1 cut(s)	689
BalI	TGGCCA	1 cut(s)	1806
BamHI	GGATCC	2 cut(s)	937, 2065
BanI	GGYRCC	3 cut(s)	4, 1247, 2372
BarI	GAAGNNNNNNTAC	2 cut(s)	1886, 1918
BauI	CACGAG	1 cut(s)	1020
BbsI	GAAGAC	2 cut(s)	456, 2511
Bbv12I	GWGCWC	3 cut(s)	399, 610, 689
BbvCI	CCTCAGC	1 cut(s)	2499
BbvI	GCAGC	4 cut(s)	1829, 2177, 2334, 2551
BceAI	ACGGC	1 cut(s)	1491
BciT130I	CCWGG	2 cut(s)	477, 1252
BclI	TGATCA	1 cut(s)	1390
BcnI	CCSGG	1 cut(s)	1269
BcoDI	GTCTC	3 cut(s)	377, 1315, 1677
BcuI	ACTAGT	1 cut(s)	2399
BfaI	CTAG	6 cut(s)	641, 1587, 1950, 2400, 2415, 2463
BfmI	CTRYAG	2 cut(s)	601, 711
BfuAI	ACCTGC	1 cut(s)	367
BisI	GCNGC	4 cut(s)	1818, 2166, 2323, 2565
BlsI	GCNGC	4 cut(s)	1819, 2167, 2324, 2566
Bme1390I	CCNGG	3 cut(s)	477, 1252, 1269
Bme18I	GGWCC	4 cut(s)	199, 479, 1841, 2149
BmeRI	GACNNNNNGTC	1 cut(s)	1987
BmgBI	CACGTC	2 cut(s)	208, 491
BmgT120I	GGNCC	5 cut(s)	199, 479, 1029, 1841, 2149
BmrFI	CCNGG	3 cut(s)	477, 1252, 1269
BmsI	GCATC	4 cut(s)	324, 535, 685, 1829
BpiI	GAAGAC	2 cut(s)	456, 2511
BpmI	CTGGAG	3 cut(s)	1532, 2302, 2589
Bpu10I	CCTNAGC	3 cut(s)	311, 1086, 2499
Bpu14I	TTCGAA	1 cut(s)	34
BpuEI	CTTGAG	2 cut(s)	1213, 1499
BpuMI	CCSGG	1 cut(s)	1269
BsaBI	GATNNNNATC	1 cut(s)	1881
BsaI	GGTCTC	1 cut(s)	1677
BsaWI	WCCGGW	1 cut(s)	1843
BsaXI	ACNNNNNCTCC	6 cut(s)	1443, 1473, 1674, 1704, 1830, 1860
Bsc4I	CCNNNNNNNGG	3 cut(s)	288, 835, 2386
Bse118I	RCCGGY	1 cut(s)	758
Bse1I	ACTGG	3 cut(s)	877, 1579, 2300
Bse3DI	GCAATG	2 cut(s)	110, 1609
Bse8I	GATNNNNATC	1 cut(s)	1881
BseBI	CCWGG	2 cut(s)	477, 1252
BseGI	GGATG	9 cut(s)	700, 1105, 1222, 1384, 1755, 1761, 1795, 2376, 2584
BseJI	GATNNNNATC	1 cut(s)	1881
BseLI	CCNNNNNNNGG	3 cut(s)	288, 835, 2386
BseMI	GCAATG	2 cut(s)	110, 1609
BseMII	CTCAG	3 cut(s)	157, 498, 2490
BseNI	ACTGG	3 cut(s)	877, 1579, 2300
BseRI	GAGGAG	3 cut(s)	908, 2213, 2216
BseSI	GKGCMC	1 cut(s)	689
BseXI	GCAGC	4 cut(s)	1829, 2177, 2334, 2551
Bsh1236I	CGCG	1 cut(s)	1825
BshFI	GGCC	5 cut(s)	599, 1031, 1506, 1806, 2456
BshNI	GGYRCC	3 cut(s)	4, 1247, 2372
BsiHKAI	GWGCWC	3 cut(s)	399, 610, 689
BsiSI	CCGG	3 cut(s)	759, 1269, 1844
BslFI	GGGAC	8 cut(s)	132, 205, 641, 874, 1585, 1636, 1967, 2162
BslI	CCNNNNNNNGG	3 cut(s)	288, 835, 2386
BsmAI	GTCTC	3 cut(s)	377, 1315, 1677
BsmFI	GGGAC	8 cut(s)	132, 205, 641, 874, 1585, 1636, 1967, 2162
BsmI	GAATGC	1 cut(s)	2105
BsnI	GGCC	5 cut(s)	599, 1031, 1506, 1806, 2456
Bso31I	GGTCTC	1 cut(s)	1677
Bsp119I	TTCGAA	1 cut(s)	34
Bsp1286I	GDGCHC	3 cut(s)	399, 610, 689
Bsp19I	CCATGG	2 cut(s)	332, 733
BspACI	CCGC	3 cut(s)	1825, 1992, 2314
BspANI	GGCC	5 cut(s)	599, 1031, 1506, 1806, 2456
BspCNI	CTCAG	3 cut(s)	156, 499, 2491
BspFNI	CGCG	1 cut(s)	1825
BspHI	TCATGA	1 cut(s)	2229
BspMI	ACCTGC	1 cut(s)	367
BspPI	GGATC	7 cut(s)	932, 934, 945, 1717, 2060, 2073, 2240
BspQI	GCTCTTC	1 cut(s)	474
BspT104I	TTCGAA	1 cut(s)	34
BspT107I	GGYRCC	3 cut(s)	4, 1247, 2372
BspTNI	GGTCTC	1 cut(s)	1677
BsrBI	CCGCTC	2 cut(s)	1994, 2316
BsrDI	GCAATG	2 cut(s)	110, 1609
BsrFI	RCCGGY	1 cut(s)	758
BsrI	ACTGG	3 cut(s)	877, 1579, 2300
BssAI	RCCGGY	1 cut(s)	758
BssSI	CACGAG	1 cut(s)	1020
BssT1I	CCWWGG	9 cut(s)	282, 332, 733, 770, 853, 987, 1618, 2050, 2549
Bst2BI	CACGAG	1 cut(s)	1020
Bst2UI	CCWGG	2 cut(s)	477, 1252
Bst4CI	ACNGT	6 cut(s)	655, 712, 818, 1958, 2190, 2366
Bst6I	CTCTTC	4 cut(s)	474, 639, 1318, 1639
BstBI	TTCGAA	1 cut(s)	34
BstC8I	GCNNGC	5 cut(s)	797, 1236, 1592, 1827, 1931
BstDEI	CTNAG	8 cut(s)	143, 311, 400, 507, 611, 1086, 1626, 2499
BstDSI	CCRYGG	3 cut(s)	332, 733, 1669
BstENI	CCTNNNNNAGG	1 cut(s)	286
BstF5I	GGATG	9 cut(s)	700, 1105, 1222, 1384, 1755, 1761, 1795, 2376, 2584
BstFNI	CGCG	1 cut(s)	1825
BstHHI	GCGC	1 cut(s)	1274
BstMAI	GTCTC	3 cut(s)	377, 1315, 1677
BstMWI	GCNNNNNNNGC	4 cut(s)	605, 1158, 1826, 2322
BstNI	CCWGG	2 cut(s)	477, 1252
BstNSI	RCATGY	5 cut(s)	1238, 1594, 1747, 2132, 2359
BstSCI	CCNGG	3 cut(s)	475, 1250, 1267
BstSFI	CTRYAG	2 cut(s)	601, 711
BstSLI	GKGCMC	1 cut(s)	689
BstUI	CGCG	1 cut(s)	1825
BstV1I	GCAGC	4 cut(s)	1829, 2177, 2334, 2551
BstV2I	GAAGAC	2 cut(s)	456, 2511
BstX2I	RGATCY	3 cut(s)	926, 937, 2065
BstXI	CCANNNNNNTGG	2 cut(s)	283, 2057
BstYI	RGATCY	3 cut(s)	926, 937, 2065
BsuRI	GGCC	5 cut(s)	599, 1031, 1506, 1806, 2456
BtgI	CCRYGG	3 cut(s)	332, 733, 1669
BtgZI	GCGATG	2 cut(s)	535, 1806
BtrI	CACGTC	2 cut(s)	208, 491
BtsCI	GGATG	9 cut(s)	700, 1105, 1222, 1384, 1755, 1761, 1795, 2376, 2584
BtsI	GCAGTG	1 cut(s)	1296
BtsIMutI	CAGTG	5 cut(s)	823, 1047, 1296, 2130, 2371
BveI	ACCTGC	1 cut(s)	367
Cac8I	GCNNGC	5 cut(s)	797, 1236, 1592, 1827, 1931
CciI	TCATGA	1 cut(s)	2229
CfoI	GCGC	1 cut(s)	1274
Cfr10I	RCCGGY	1 cut(s)	758
Cfr13I	GGNCC	5 cut(s)	199, 479, 1029, 1841, 2149
CseI	GACGC	1 cut(s)	848
CsiI	ACCWGGT	1 cut(s)	475
Csp6I	GTAC	2 cut(s)	519, 2392
CspCI	CAANNNNNGTGG	2 cut(s)	1135, 1170
CviQI	GTAC	2 cut(s)	519, 2392
DdeI	CTNAG	8 cut(s)	143, 311, 400, 507, 611, 1086, 1626, 2499
DrdI	GACNNNNNNGTC	1 cut(s)	2239
DriI	GACNNNNNGTC	1 cut(s)	1987
DseDI	GACNNNNNNGTC	1 cut(s)	2239
EaeI	YGGCCR	1 cut(s)	1804
Eam1104I	CTCTTC	4 cut(s)	474, 639, 1318, 1639
Eam1105I	GACNNNNNGTC	1 cut(s)	1987
EarI	CTCTTC	4 cut(s)	474, 639, 1318, 1639
Eco130I	CCWWGG	9 cut(s)	282, 332, 733, 770, 853, 987, 1618, 2050, 2549
Eco147I	AGGCCT	1 cut(s)	599
Eco31I	GGTCTC	1 cut(s)	1677
Eco32I	GATATC	1 cut(s)	406
Eco47I	GGWCC	4 cut(s)	199, 479, 1841, 2149
Eco57I	CTGAAG	3 cut(s)	141, 1134, 1455
EcoNI	CCTNNNNNAGG	1 cut(s)	286
EcoRII	CCWGG	2 cut(s)	475, 1250
EcoRV	GATATC	1 cut(s)	406
EcoT14I	CCWWGG	9 cut(s)	282, 332, 733, 770, 853, 987, 1618, 2050, 2549
ErhI	CCWWGG	9 cut(s)	282, 332, 733, 770, 853, 987, 1618, 2050, 2549
FaqI	GGGAC	8 cut(s)	132, 205, 641, 874, 1585, 1636, 1967, 2162
FauI	CCCGC	1 cut(s)	1818
FauNDI	CATATG	2 cut(s)	955, 1719
FbaI	TGATCA	1 cut(s)	1390
FblI	GTMKAC	1 cut(s)	341
Fnu4HI	GCNGC	4 cut(s)	1818, 2166, 2323, 2565
FokI	GGATG	9 cut(s)	707, 1112, 1229, 1371, 1748, 1762, 1782, 2363, 2591
Fsp4HI	GCNGC	4 cut(s)	1818, 2166, 2323, 2565
FspBI	CTAG	6 cut(s)	641, 1587, 1950, 2400, 2415, 2463
GlaI	GCGC	1 cut(s)	1273
GluI	GCNGC	4 cut(s)	1818, 2166, 2323, 2565
GsuI	CTGGAG	3 cut(s)	1532, 2302, 2589
HaeIII	GGCC	5 cut(s)	599, 1031, 1506, 1806, 2456
HapII	CCGG	3 cut(s)	759, 1269, 1844
HgaI	GACGC	1 cut(s)	848
HhaI	GCGC	1 cut(s)	1274
Hin6I	GCGC	1 cut(s)	1272
HinP1I	GCGC	1 cut(s)	1272
HincII	GTYRAC	2 cut(s)	273, 670
HindII	GTYRAC	2 cut(s)	273, 670
HinfI	GANTC	9 cut(s)	862, 959, 1044, 1320, 1452, 1753, 1859, 2468, 2542
HpaII	CCGG	3 cut(s)	759, 1269, 1844
HphI	GGTGA	4 cut(s)	1363, 1502, 1664, 2281
Hpy166II	GTNNAC	6 cut(s)	273, 342, 670, 687, 1462, 2531
Hpy8I	GTNNAC	6 cut(s)	273, 342, 670, 687, 1462, 2531
Hpy99I	CGWCG	1 cut(s)	1328
HpyAV	CCTTC	8 cut(s)	180, 270, 709, 960, 1009, 1168, 1952, 2422
HpyCH4III	ACNGT	6 cut(s)	655, 712, 818, 1958, 2190, 2366
HpyCH4IV	ACGT	3 cut(s)	207, 490, 1464
HpyCH4V	TGCA	8 cut(s)	376, 687, 1289, 1420, 1594, 1602, 1817, 2128
HpyF10VI	GCNNNNNNNGC	4 cut(s)	605, 1158, 1826, 2322
HpyF3I	CTNAG	8 cut(s)	143, 311, 400, 507, 611, 1086, 1626, 2499
HpySE526I	ACGT	3 cut(s)	207, 490, 1464
HspAI	GCGC	1 cut(s)	1272
Ksp22I	TGATCA	1 cut(s)	1390
LguI	GCTCTTC	1 cut(s)	474
LmnI	GCTCC	5 cut(s)	642, 952, 1513, 2036, 2321
Lsp1109I	GCAGC	4 cut(s)	1829, 2177, 2334, 2551
LweI	GCATC	4 cut(s)	324, 535, 685, 1829
MabI	ACCWGGT	1 cut(s)	475
MaeI	CTAG	6 cut(s)	641, 1587, 1950, 2400, 2415, 2463
MaeII	ACGT	3 cut(s)	207, 490, 1464
MaeIII	GTNAC	9 cut(s)	136, 296, 818, 899, 1022, 1045, 1294, 1704, 1856
MbiI	CCGCTC	2 cut(s)	1994, 2316
MflI	RGATCY	3 cut(s)	926, 937, 2065
MhlI	GDGCHC	3 cut(s)	399, 610, 689
MlsI	TGGCCA	1 cut(s)	1806
MluNI	TGGCCA	1 cut(s)	1806
MlyI	GAGTC	6 cut(s)	856, 1053, 1314, 1461, 1762, 1853
MmeI	TCCRAC	9 cut(s)	152, 226, 348, 915, 987, 1077, 1789, 1970, 2367
Mox20I	TGGCCA	1 cut(s)	1806
MroXI	GAANNNNTTC	1 cut(s)	1178
MscI	TGGCCA	1 cut(s)	1806
MseI	TTAA	4 cut(s)	24, 707, 1305, 2433
MslI	CAYNNNNRTG	6 cut(s)	210, 587, 1284, 1748, 1800, 2294
Msp20I	TGGCCA	1 cut(s)	1806
MspI	CCGG	3 cut(s)	759, 1269, 1844
MspR9I	CCNGG	3 cut(s)	477, 1252, 1269
Mva1269I	GAATGC	1 cut(s)	2105
MvaI	CCWGG	2 cut(s)	477, 1252
MvnI	CGCG	1 cut(s)	1825
MwoI	GCNNNNNNNGC	4 cut(s)	605, 1158, 1826, 2322
NciI	CCSGG	1 cut(s)	1269
NcoI	CCATGG	2 cut(s)	332, 733
NdeI	CATATG	2 cut(s)	955, 1719
NmeAIII	GCCGAG	1 cut(s)	2432
NmuCI	GTSAC	7 cut(s)	136, 818, 899, 1022, 1045, 1294, 1856
NspI	RCATGY	5 cut(s)	1238, 1594, 1747, 2132, 2359
NspV	TTCGAA	1 cut(s)	34
OliI	CACNNNNGTG	2 cut(s)	210, 2294
PaeI	GCATGC	2 cut(s)	1238, 1594
PagI	TCATGA	1 cut(s)	2229
PaqCI	CACCTGC	1 cut(s)	367
PceI	AGGCCT	1 cut(s)	599
PciI	ACATGT	1 cut(s)	2355
PciSI	GCTCTTC	1 cut(s)	474
PctI	GAATGC	1 cut(s)	2105
PdmI	GAANNNNTTC	1 cut(s)	1178
PfeI	GAWTC	3 cut(s)	959, 2468, 2542
PflMI	CCANNNNNTGG	1 cut(s)	2386
PkrI	GCNGC	4 cut(s)	1819, 2167, 2324, 2566
PleI	GAGTC	6 cut(s)	856, 1052, 1314, 1460, 1761, 1853
PpsI	GAGTC	6 cut(s)	856, 1052, 1314, 1460, 1761, 1853
PscI	ACATGT	1 cut(s)	2355
Psp6I	CCWGG	2 cut(s)	475, 1250
PspGI	CCWGG	2 cut(s)	475, 1250
PspPI	GGNCC	5 cut(s)	199, 479, 1029, 1841, 2149
PsuI	RGATCY	3 cut(s)	926, 937, 2065
RsaI	GTAC	2 cut(s)	520, 2393
RsaNI	GTAC	2 cut(s)	519, 2392
RseI	CAYNNNNRTG	6 cut(s)	210, 587, 1284, 1748, 1800, 2294
SapI	GCTCTTC	1 cut(s)	474
SaqAI	TTAA	4 cut(s)	24, 707, 1305, 2433
SatI	GCNGC	4 cut(s)	1818, 2166, 2323, 2565
Sau96I	GGNCC	5 cut(s)	199, 479, 1029, 1841, 2149
SchI	GAGTC	6 cut(s)	856, 1053, 1314, 1461, 1762, 1853
ScrFI	CCNGG	3 cut(s)	477, 1252, 1269
SduI	GDGCHC	3 cut(s)	399, 610, 689
SexAI	ACCWGGT	1 cut(s)	475
SfaNI	GCATC	4 cut(s)	324, 535, 685, 1829
SfcI	CTRYAG	2 cut(s)	601, 711
SfuI	TTCGAA	1 cut(s)	34
SinI	GGWCC	4 cut(s)	199, 479, 1841, 2149
SmiMI	CAYNNNNRTG	6 cut(s)	210, 587, 1284, 1748, 1800, 2294
SmlI	CTYRAG	2 cut(s)	1192, 1478
SmoI	CTYRAG	2 cut(s)	1192, 1478
SpeI	ACTAGT	1 cut(s)	2399
SphI	GCATGC	2 cut(s)	1238, 1594
SseBI	AGGCCT	1 cut(s)	599
SsiI	CCGC	3 cut(s)	1825, 1992, 2314
SspMI	CTAG	6 cut(s)	641, 1587, 1950, 2400, 2415, 2463
StuI	AGGCCT	1 cut(s)	599
StyD4I	CCNGG	3 cut(s)	475, 1250, 1267
StyI	CCWWGG	9 cut(s)	282, 332, 733, 770, 853, 987, 1618, 2050, 2549
TaaI	ACNGT	6 cut(s)	655, 712, 818, 1958, 2190, 2366
TaiI	ACGT	3 cut(s)	210, 493, 1467
TaqI	TCGA	5 cut(s)	34, 72, 1323, 1331, 2280
TatI	WGTACW	1 cut(s)	2391
TfiI	GAWTC	3 cut(s)	959, 2468, 2542
Tru1I	TTAA	4 cut(s)	24, 707, 1305, 2433
Tru9I	TTAA	4 cut(s)	24, 707, 1305, 2433
TscAI	CASTG	5 cut(s)	823, 1054, 1303, 2130, 2371
TseFI	GTSAC	7 cut(s)	136, 818, 899, 1022, 1045, 1294, 1856
TseI	GCWGC	4 cut(s)	1817, 2165, 2322, 2564
Tsp45I	GTSAC	7 cut(s)	136, 818, 899, 1022, 1045, 1294, 1856
TspGWI	ACGGA	2 cut(s)	1515, 1658
TspRI	CASTG	5 cut(s)	823, 1054, 1303, 2130, 2371
Van91I	CCANNNNNTGG	1 cut(s)	2386
VneI	GTGCAC	1 cut(s)	685
VpaK11BI	GGWCC	4 cut(s)	199, 479, 1841, 2149
XagI	CCTNNNNNAGG	1 cut(s)	286
XapI	RAATTY	6 cut(s)	37, 455, 746, 2001, 2330, 2479
XceI	RCATGY	5 cut(s)	1238, 1594, 1747, 2132, 2359
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2383
XmiI	GTMKAC	1 cut(s)	341
XmnI	GAANNNNTTC	1 cut(s)	1178
XspI	CTAG	6 cut(s)	641, 1587, 1950, 2400, 2415, 2463

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.