RchiOBHm_Chr2g0091201

Stachyose

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0002202
Physical Location & Seq
Reverse (-)
4869049 .. 4872100
3052 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46640

Sequence Viewer

Length: 2601 bp
ATGGCACCCCCTAATGAACCTGTTAATCCAATTCGAAATTTGTTCCATTGTGCGAGTTCGGAACTCTACTTCGACTTGTCTGATGGAAAGTTGAGTGTGAAAGGTGTTCCATTGCTCTCTGAAGTTCCAACCAATGTCACTCTCAGTCCCTTTCATTCAATCTTCCAACCTTCTTCTTGTTCTGATGTTCCATCTCATCTGGTCCGACGCGTCTGTGCCTTGTCCCACAAGGCAGGGTTTCTTGGGTTCAATAAGGAGGAGCCTTCTGATAAGTTGACCAACTCCTTGGGTAGGTTCAGTAACAGGGATTTCCTTAGCATCTTTAGGTTCAAACCATGGTGGTCTACCATGTGGGTTGGGAAGTCTGGGTCGGATTTGCAGGTGGAGACACAATGGGTGCTCTTAGATATCCCTGAAATCAAGTCCTATGTCATAATCGTACCGATCATTGAAGACAAATTCAGGTCTGCTCTTCTACCTGGTCCTGATGGTCATGTAGTTGTCTTTGCTGAGAGTGGTTGTACCCAAGTGAAAACTTCATATTTTGATGCCATCGCTTATGTTCATGCTTCTGATAATCCCTACACCTTGATGAAAGAGGCCTATAGTGCTCTTAGGGTTCATCTCAATACCTTTAGGCTCCTAGAAGAGAAAACAGTCCCAAGTTTAGTTGACAAGTTTGGTTGGTGCACTTGGGATGCCTTCTATTTAACTGTAGAACCTGTTGGTGTTTTCCATGGGGTCAAGGAATTTGTTGAAGCCGGTGTTCCCCCAAGGTTTATCATCATTGATGATGGCTGGCAAAGTATCAATTTTGACAGTGACGAAAACCCGAATGAGGACGCACATCTAATCCTTGGTGGGACTCAAATGACTGGTAGGCTTCACAGGTTTGAGGAGTGTGACAAGTTTAGGAACTACAAAGGAGGATCTTTGTTGGATCCTAACGCTCCTTCATATGATTCCAACAGGCAGAAGAAGTTGATAGCCAAGGCACTTGAAGTTGAGGATATTGAGAAGGCTCGTGACAGGGCCATTCAATCAGGAGTCACTGATTTGTTCGAGTTCAAAACACAATGGCAGAAGCTTAAGCAAGAGTTGGATGTGATGATTGCTGAAGAAGAAAAAAATAGTGGTTCTGCTTCTACCAATGGCTGTGGAAGCTATGGTGGAATGAAGGCTTTCACAAGCGACTTGAGAACCAAATATAAGGGTTTGGATGATATTTATGTATGGCATGCTCTTTGTGGTGCCTGGGGTGGTGTAAAGCCCGGCGCAACCCATCTCAATGCAAAGGTCACTGCTGTTAATGTCTCTTCTGGACTCGACAGGTCGATGACTGATCTTGCTGTGGTGAAACTCATAGAGGGTGGCATTGGACTTGTTCATCCTGATCAATCTGACGACTTCTTCAATTCTATGCACTCCTATCTTTCTGAAGTTGGTATAACAGGAGTCAAAGTGGACGTTATTCATAGTCTTGAGTTTTTAGGTGAGGAACACGGAGGCCGTCTGGAGCTTCCAAAGGCATATTACAAGGGGCTTACTTCTTCCCTTGTAAATAACTTCAGTGGGACTGGACTTATTTCTAGCATGCAACAATGCAATGACTTCTTCTTCCTTGGGACTAAGCAAATCTCTATTGGAAGAGTTGGTGATGACTTTTGGTTCCGTGGTGGAGATGGAGACCCTATGGCAGTTTATTGGTTACAAGGAGTTCATATGATCCATTGTGCTTACAACAGCATGTGGATGAGTCAGTTCATCCAACCTGATTGGGATATGTTCCAATCAGAACATCCATGTGGCCAATTTCATGCAGCATCGCGGGCAATATGTGGAGGTCCGGTATATGTGAGTGACTCGCTTGATTGTCATGATTTTGATCTCATCAAGAAGTTGGCTTACCCAGATGGAACCATTCCCAAGTGCCAGCATTTTGCCCTTCCAACTAGGGACTGTCTATTCAAAAACCCTTTGAATGACAGCAAGTCCGCTCTCAAAATTTGGAACTTGAACAAGTATGCTGGTGTCATTGGATCTTTCAACTGCCAAGGGGCTGGTTGGGATCCAAAAGAGCAAAAGATCAGAGGCTATCCCGAATGCTATGAGGAAATCCATTGTTCAGTGCATGTTTCTGAAATTGAATGGGACCAAAAGAAAGAAGCAGCCAATTTGGGCAAGGCTGAACAGTATGTGGTCTATCTCAACCAGACTGATGAACTCCTCTTCGTGACCCCCAAGTCTGATCCAATTCAAATCACAATCAAACCATCTTCGTTCGAGATTTTCACCTTTGTGCCAGTTCAAAATCTCCGCTCCAGCAGCACTAAATTTGCGCCTATTGGACTGACCAACATGTTCAACAGTGGAGGCACCATCCAAGAGTTGGAGTACAATACTAGTTCGGTTTCTTCTAGTGTCAAGATGAAGGTTAAAGGTGGAGGCAATTTCTCGGCCTACTCTAGTGAATCCCCAAAGAATTTCTGTTTGAATGGTGCTGAGGTGGATTTTGAGTGGTCTTCCTGTGGTAAACTGACCCTGAATCTTCCTTGGGTTGAAGAAGCTGCTGGAGTTTCGGATGTGGTTTTGGTGTTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0006950 GO:0006979 GO:0008150 GO:0008378 GO:0009628 GO:0016740 GO:0016757 GO:0016758 GO:0047268 GO:0050896 GO:0080167
KEGG Pathways
Metabolic & Signaling
ko00052 map00052
Pfam Domains
Protein Families
Raffinose_syn

Protein Analysis

866

Amino Acids

96.37

Weight (kDa)

5.42

Isoelectric Point (pI)

36.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Raffinose_syn PF05691 24 - 849 0.0 Raffinose synthase or seed imbibition protein Sip1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 370
AasI GACNNNNNNGTC 1 cut(s) 2242
Acc36I ACCTGC 1 cut(s) 370
AccB1I GGYRCC 3 cut(s) 4, 1250, 2375
AccB7I CCANNNNNTGG 1 cut(s) 2389
AccBSI CCGCTC 2 cut(s) 1997, 2319
AccI GTMKAC 1 cut(s) 344
AccII CGCG 2 cut(s) 210, 1828
AciI CCGC 3 cut(s) 1828, 1995, 2317
AclWI GGATC 8 cut(s) 935, 937, 948, 1720, 2047, 2063, 2076, 2243
AcoI YGGCCR 1 cut(s) 1807
AcsI RAATTY 6 cut(s) 37, 458, 749, 2004, 2333, 2482
AcuI CTGAAG 4 cut(s) 141, 1137, 1458, 1552
AfaI GTAC 3 cut(s) 441, 523, 2396
AfiI CCNNNNNNNGG 3 cut(s) 291, 838, 2389
AflII CTTAAG 1 cut(s) 1088
AflIII ACRYGT 2 cut(s) 208, 2358
AhdI GACNNNNNGTC 1 cut(s) 1990
AhlI ACTAGT 1 cut(s) 2402
AjnI CCWGG 2 cut(s) 478, 1253
AleI CACNNNNGTG 1 cut(s) 2297
AluBI AGCT 4 cut(s) 1087, 1164, 1519, 2567
AluI AGCT 4 cut(s) 1087, 1164, 1519, 2567
Alw21I GWGCWC 3 cut(s) 402, 613, 692
Alw26I GTCTC 3 cut(s) 380, 1318, 1680
Alw44I GTGCAC 1 cut(s) 688
AlwI GGATC 8 cut(s) 935, 937, 948, 1720, 2047, 2063, 2076, 2243
AoxI GGCC 5 cut(s) 600, 1032, 1507, 1807, 2457
ApaLI GTGCAC 1 cut(s) 688
ApeKI GCWGC 4 cut(s) 1820, 2168, 2325, 2567
ApoI RAATTY 6 cut(s) 37, 458, 749, 2004, 2333, 2482
Asp700I GAANNNNTTC 1 cut(s) 1181
AspLEI GCGC 2 cut(s) 1277, 2341
AspS9I GGNCC 5 cut(s) 202, 482, 1032, 1844, 2152
AsuC2I CCSGG 1 cut(s) 1272
AsuHPI GGTGA 4 cut(s) 1366, 1505, 1667, 2284
AsuII TTCGAA 1 cut(s) 34
AvaII GGWCC 4 cut(s) 202, 482, 1844, 2152
BaeGI GKGCMC 1 cut(s) 692
BalI TGGCCA 1 cut(s) 1809
BamHI GGATCC 2 cut(s) 940, 2068
BanI GGYRCC 3 cut(s) 4, 1250, 2375
BarI GAAGNNNNNNTAC 2 cut(s) 1889, 1921
BauI CACGAG 1 cut(s) 1023
BbsI GAAGAC 2 cut(s) 459, 2514
Bbv12I GWGCWC 3 cut(s) 402, 613, 692
BbvCI CCTCAGC 1 cut(s) 2502
BbvI GCAGC 4 cut(s) 1832, 2180, 2337, 2554
BceAI ACGGC 1 cut(s) 1494
BciT130I CCWGG 2 cut(s) 480, 1255
BclI TGATCA 1 cut(s) 1393
BcnI CCSGG 1 cut(s) 1272
BcoDI GTCTC 3 cut(s) 380, 1318, 1680
BcuI ACTAGT 1 cut(s) 2402
BfaI CTAG 6 cut(s) 644, 1590, 1953, 2403, 2418, 2466
BfmI CTRYAG 2 cut(s) 604, 714
BfrI CTTAAG 1 cut(s) 1088
BfuAI ACCTGC 1 cut(s) 370
BisI GCNGC 4 cut(s) 1821, 2169, 2326, 2568
BlsI GCNGC 4 cut(s) 1822, 2170, 2327, 2569
Bme1390I CCNGG 3 cut(s) 480, 1255, 1272
Bme18I GGWCC 4 cut(s) 202, 482, 1844, 2152
BmeRI GACNNNNNGTC 1 cut(s) 1990
BmgT120I GGNCC 5 cut(s) 202, 482, 1032, 1844, 2152
BmrFI CCNGG 3 cut(s) 480, 1255, 1272
BmsI GCATC 4 cut(s) 327, 538, 688, 1832
BpiI GAAGAC 2 cut(s) 459, 2514
BpmI CTGGAG 3 cut(s) 1535, 2305, 2592
Bpu10I CCTNAGC 2 cut(s) 314, 2502
Bpu14I TTCGAA 1 cut(s) 34
BpuEI CTTGAG 2 cut(s) 1216, 1502
BpuMI CCSGG 1 cut(s) 1272
BsaBI GATNNNNATC 1 cut(s) 1884
BsaI GGTCTC 1 cut(s) 1680
BsaWI WCCGGW 1 cut(s) 1846
BsaXI ACNNNNNCTCC 4 cut(s) 1446, 1476, 1833, 1863
Bsc4I CCNNNNNNNGG 3 cut(s) 291, 838, 2389
Bse118I RCCGGY 1 cut(s) 761
Bse1I ACTGG 3 cut(s) 880, 1582, 2303
Bse3DI GCAATG 2 cut(s) 110, 1612
Bse8I GATNNNNATC 1 cut(s) 1884
BseBI CCWGG 2 cut(s) 480, 1255
BseGI GGATG 9 cut(s) 703, 1108, 1225, 1387, 1758, 1764, 1798, 2379, 2587
BseJI GATNNNNATC 1 cut(s) 1884
BseLI CCNNNNNNNGG 3 cut(s) 291, 838, 2389
BseMI GCAATG 2 cut(s) 110, 1612
BseMII CTCAG 3 cut(s) 157, 501, 2493
BseNI ACTGG 3 cut(s) 880, 1582, 2303
BseRI GAGGAG 3 cut(s) 272, 911, 2216
BseSI GKGCMC 1 cut(s) 692
BseXI GCAGC 4 cut(s) 1832, 2180, 2337, 2554
Bsh1236I CGCG 2 cut(s) 210, 1828
BshFI GGCC 5 cut(s) 602, 1034, 1509, 1809, 2459
BshNI GGYRCC 3 cut(s) 4, 1250, 2375
BsiHKAI GWGCWC 3 cut(s) 402, 613, 692
BsiSI CCGG 3 cut(s) 762, 1272, 1847
BslFI GGGAC 8 cut(s) 132, 208, 644, 877, 1588, 1639, 1970, 2165
BslI CCNNNNNNNGG 3 cut(s) 291, 838, 2389
BsmAI GTCTC 3 cut(s) 380, 1318, 1680
BsmFI GGGAC 8 cut(s) 132, 208, 644, 877, 1588, 1639, 1970, 2165
BsmI GAATGC 1 cut(s) 2108
BsnI GGCC 5 cut(s) 602, 1034, 1509, 1809, 2459
Bso31I GGTCTC 1 cut(s) 1680
Bsp119I TTCGAA 1 cut(s) 34
Bsp1286I GDGCHC 3 cut(s) 402, 613, 692
Bsp19I CCATGG 2 cut(s) 335, 736
BspACI CCGC 3 cut(s) 1828, 1995, 2317
BspANI GGCC 5 cut(s) 602, 1034, 1509, 1809, 2459
BspCNI CTCAG 3 cut(s) 156, 502, 2494
BspFNI CGCG 2 cut(s) 210, 1828
BspHI TCATGA 1 cut(s) 1876
BspMI ACCTGC 1 cut(s) 370
BspPI GGATC 8 cut(s) 935, 937, 948, 1720, 2047, 2063, 2076, 2243
BspQI GCTCTTC 1 cut(s) 477
BspT104I TTCGAA 1 cut(s) 34
BspT107I GGYRCC 3 cut(s) 4, 1250, 2375
BspTI CTTAAG 1 cut(s) 1088
BspTNI GGTCTC 1 cut(s) 1680
BsrBI CCGCTC 2 cut(s) 1997, 2319
BsrDI GCAATG 2 cut(s) 110, 1612
BsrFI RCCGGY 1 cut(s) 761
BsrI ACTGG 3 cut(s) 880, 1582, 2303
BssAI RCCGGY 1 cut(s) 761
BssSI CACGAG 1 cut(s) 1023
BssT1I CCWWGG 9 cut(s) 285, 335, 736, 773, 856, 990, 1621, 2053, 2552
Bst2BI CACGAG 1 cut(s) 1023
Bst2UI CCWGG 2 cut(s) 480, 1255
Bst4CI ACNGT 6 cut(s) 658, 715, 821, 1961, 2193, 2369
Bst6I CTCTTC 5 cut(s) 477, 642, 1321, 1642, 2234
BstAFI CTTAAG 1 cut(s) 1088
BstBI TTCGAA 1 cut(s) 34
BstC8I GCNNGC 5 cut(s) 800, 1239, 1595, 1830, 1934
BstDEI CTNAG 7 cut(s) 143, 314, 403, 510, 614, 1629, 2502
BstDSI CCRYGG 3 cut(s) 335, 736, 1672
BstENI CCTNNNNNAGG 1 cut(s) 289
BstF5I GGATG 9 cut(s) 703, 1108, 1225, 1387, 1758, 1764, 1798, 2379, 2587
BstFNI CGCG 2 cut(s) 210, 1828
BstHHI GCGC 2 cut(s) 1277, 2341
BstMAI GTCTC 3 cut(s) 380, 1318, 1680
BstMWI GCNNNNNNNGC 4 cut(s) 608, 1161, 1829, 2325
BstNI CCWGG 2 cut(s) 480, 1255
BstNSI RCATGY 5 cut(s) 1241, 1597, 1750, 2135, 2362
BstSCI CCNGG 3 cut(s) 478, 1253, 1270
BstSFI CTRYAG 2 cut(s) 604, 714
BstSLI GKGCMC 1 cut(s) 692
BstUI CGCG 2 cut(s) 210, 1828
BstV1I GCAGC 4 cut(s) 1832, 2180, 2337, 2554
BstV2I GAAGAC 2 cut(s) 459, 2514
BstX2I RGATCY 4 cut(s) 929, 940, 2039, 2068
BstXI CCANNNNNNTGG 2 cut(s) 286, 2060
BstYI RGATCY 4 cut(s) 929, 940, 2039, 2068
BsuRI GGCC 5 cut(s) 602, 1034, 1509, 1809, 2459
BtgI CCRYGG 3 cut(s) 335, 736, 1672
BtgZI GCGATG 2 cut(s) 538, 1809
BtsCI GGATG 9 cut(s) 703, 1108, 1225, 1387, 1758, 1764, 1798, 2379, 2587
BtsI GCAGTG 1 cut(s) 1299
BtsIMutI CAGTG 6 cut(s) 826, 1050, 1299, 1576, 2133, 2374
BveI ACCTGC 1 cut(s) 370
Cac8I GCNNGC 5 cut(s) 800, 1239, 1595, 1830, 1934
CciI TCATGA 1 cut(s) 1876
CfoI GCGC 2 cut(s) 1277, 2341
Cfr10I RCCGGY 1 cut(s) 761
Cfr13I GGNCC 5 cut(s) 202, 482, 1032, 1844, 2152
CseI GACGC 3 cut(s) 199, 216, 851
CsiI ACCWGGT 1 cut(s) 478
Csp6I GTAC 3 cut(s) 440, 522, 2395
CspCI CAANNNNNGTGG 2 cut(s) 1138, 1173
CviQI GTAC 3 cut(s) 440, 522, 2395
DdeI CTNAG 7 cut(s) 143, 314, 403, 510, 614, 1629, 2502
DrdI GACNNNNNNGTC 1 cut(s) 2242
DriI GACNNNNNGTC 1 cut(s) 1990
DseDI GACNNNNNNGTC 1 cut(s) 2242
EaeI YGGCCR 1 cut(s) 1807
Eam1104I CTCTTC 5 cut(s) 477, 642, 1321, 1642, 2234
Eam1105I GACNNNNNGTC 1 cut(s) 1990
EarI CTCTTC 5 cut(s) 477, 642, 1321, 1642, 2234
Eco130I CCWWGG 9 cut(s) 285, 335, 736, 773, 856, 990, 1621, 2053, 2552
Eco147I AGGCCT 1 cut(s) 602
Eco31I GGTCTC 1 cut(s) 1680
Eco32I GATATC 1 cut(s) 409
Eco47I GGWCC 4 cut(s) 202, 482, 1844, 2152
Eco57I CTGAAG 4 cut(s) 141, 1137, 1458, 1552
EcoNI CCTNNNNNAGG 1 cut(s) 289
EcoRII CCWGG 2 cut(s) 478, 1253
EcoRV GATATC 1 cut(s) 409
EcoT14I CCWWGG 9 cut(s) 285, 335, 736, 773, 856, 990, 1621, 2053, 2552
ErhI CCWWGG 9 cut(s) 285, 335, 736, 773, 856, 990, 1621, 2053, 2552
FaqI GGGAC 8 cut(s) 132, 208, 644, 877, 1588, 1639, 1970, 2165
FauI CCCGC 1 cut(s) 1821
FauNDI CATATG 2 cut(s) 958, 1722
FbaI TGATCA 1 cut(s) 1393
FblI GTMKAC 1 cut(s) 344
Fnu4HI GCNGC 4 cut(s) 1821, 2169, 2326, 2568
FokI GGATG 9 cut(s) 710, 1115, 1232, 1374, 1751, 1765, 1785, 2366, 2594
Fsp4HI GCNGC 4 cut(s) 1821, 2169, 2326, 2568
FspBI CTAG 6 cut(s) 644, 1590, 1953, 2403, 2418, 2466
GlaI GCGC 2 cut(s) 1276, 2340
GluI GCNGC 4 cut(s) 1821, 2169, 2326, 2568
GsuI CTGGAG 3 cut(s) 1535, 2305, 2592
HaeIII GGCC 5 cut(s) 602, 1034, 1509, 1809, 2459
HapII CCGG 3 cut(s) 762, 1272, 1847
HgaI GACGC 3 cut(s) 199, 216, 851
HhaI GCGC 2 cut(s) 1277, 2341
Hin6I GCGC 2 cut(s) 1275, 2339
HinP1I GCGC 2 cut(s) 1275, 2339
HincII GTYRAC 2 cut(s) 276, 673
HindII GTYRAC 2 cut(s) 276, 673
HindIII AAGCTT 1 cut(s) 1085
HinfI GANTC 9 cut(s) 865, 962, 1047, 1323, 1455, 1756, 1862, 2471, 2545
HpaII CCGG 3 cut(s) 762, 1272, 1847
HphI GGTGA 4 cut(s) 1366, 1505, 1667, 2284
Hpy166II GTNNAC 6 cut(s) 276, 345, 673, 690, 1465, 2534
Hpy8I GTNNAC 6 cut(s) 276, 345, 673, 690, 1465, 2534
Hpy99I CGWCG 1 cut(s) 210
HpyAV CCTTC 8 cut(s) 180, 273, 712, 963, 1012, 1171, 1955, 2425
HpyCH4III ACNGT 6 cut(s) 658, 715, 821, 1961, 2193, 2369
HpyCH4IV ACGT 1 cut(s) 1467
HpyCH4V TGCA 8 cut(s) 379, 690, 1292, 1423, 1597, 1605, 1820, 2131
HpyF10VI GCNNNNNNNGC 4 cut(s) 608, 1161, 1829, 2325
HpyF3I CTNAG 7 cut(s) 143, 314, 403, 510, 614, 1629, 2502
HpySE526I ACGT 1 cut(s) 1467
HspAI GCGC 2 cut(s) 1275, 2339
Ksp22I TGATCA 1 cut(s) 1393
LguI GCTCTTC 1 cut(s) 477
LmnI GCTCC 5 cut(s) 259, 645, 955, 1516, 2324
Lsp1109I GCAGC 4 cut(s) 1832, 2180, 2337, 2554
LweI GCATC 4 cut(s) 327, 538, 688, 1832
MabI ACCWGGT 1 cut(s) 478
MaeI CTAG 6 cut(s) 644, 1590, 1953, 2403, 2418, 2466
MaeII ACGT 1 cut(s) 1467
MbiI CCGCTC 2 cut(s) 1997, 2319
MflI RGATCY 4 cut(s) 929, 940, 2039, 2068
MhlI GDGCHC 3 cut(s) 402, 613, 692
MlsI TGGCCA 1 cut(s) 1809
MluI ACGCGT 1 cut(s) 208
MluNI TGGCCA 1 cut(s) 1809
MlyI GAGTC 6 cut(s) 859, 1056, 1317, 1464, 1765, 1856
Mox20I TGGCCA 1 cut(s) 1809
MroXI GAANNNNTTC 1 cut(s) 1181
MscI TGGCCA 1 cut(s) 1809
MseI TTAA 5 cut(s) 24, 710, 1089, 1308, 2436
MslI CAYNNNNRTG 5 cut(s) 590, 1287, 1751, 1803, 2297
Msp20I TGGCCA 1 cut(s) 1809
MspCI CTTAAG 1 cut(s) 1088
MspI CCGG 3 cut(s) 762, 1272, 1847
MspR9I CCNGG 3 cut(s) 480, 1255, 1272
Mva1269I GAATGC 1 cut(s) 2108
MvaI CCWGG 2 cut(s) 480, 1255
MvnI CGCG 2 cut(s) 210, 1828
MwoI GCNNNNNNNGC 4 cut(s) 608, 1161, 1829, 2325
NciI CCSGG 1 cut(s) 1272
NcoI CCATGG 2 cut(s) 335, 736
NdeI CATATG 2 cut(s) 958, 1722
NmeAIII GCCGAG 1 cut(s) 2435
NmuCI GTSAC 8 cut(s) 136, 821, 902, 1025, 1048, 1297, 1859, 2233
NspI RCATGY 5 cut(s) 1241, 1597, 1750, 2135, 2362
NspV TTCGAA 1 cut(s) 34
OliI CACNNNNGTG 1 cut(s) 2297
PaeI GCATGC 2 cut(s) 1241, 1597
PagI TCATGA 1 cut(s) 1876
PaqCI CACCTGC 1 cut(s) 370
PceI AGGCCT 1 cut(s) 602
PciI ACATGT 1 cut(s) 2358
PciSI GCTCTTC 1 cut(s) 477
PctI GAATGC 1 cut(s) 2108
PdmI GAANNNNTTC 1 cut(s) 1181
PfeI GAWTC 3 cut(s) 962, 2471, 2545
PflMI CCANNNNNTGG 1 cut(s) 2389
PkrI GCNGC 4 cut(s) 1822, 2170, 2327, 2569
PleI GAGTC 6 cut(s) 859, 1055, 1317, 1463, 1764, 1856
PpsI GAGTC 6 cut(s) 859, 1055, 1317, 1463, 1764, 1856
PscI ACATGT 1 cut(s) 2358
Psp6I CCWGG 2 cut(s) 478, 1253
PspGI CCWGG 2 cut(s) 478, 1253
PspPI GGNCC 5 cut(s) 202, 482, 1032, 1844, 2152
PsuI RGATCY 4 cut(s) 929, 940, 2039, 2068
RsaI GTAC 3 cut(s) 441, 523, 2396
RsaNI GTAC 3 cut(s) 440, 522, 2395
RseI CAYNNNNRTG 5 cut(s) 590, 1287, 1751, 1803, 2297
SapI GCTCTTC 1 cut(s) 477
SaqAI TTAA 5 cut(s) 24, 710, 1089, 1308, 2436
SatI GCNGC 4 cut(s) 1821, 2169, 2326, 2568
Sau96I GGNCC 5 cut(s) 202, 482, 1032, 1844, 2152
SchI GAGTC 6 cut(s) 859, 1056, 1317, 1464, 1765, 1856
ScrFI CCNGG 3 cut(s) 480, 1255, 1272
SduI GDGCHC 3 cut(s) 402, 613, 692
SexAI ACCWGGT 1 cut(s) 478
SfaNI GCATC 4 cut(s) 327, 538, 688, 1832
SfcI CTRYAG 2 cut(s) 604, 714
SfuI TTCGAA 1 cut(s) 34
SinI GGWCC 4 cut(s) 202, 482, 1844, 2152
SmiMI CAYNNNNRTG 5 cut(s) 590, 1287, 1751, 1803, 2297
SmlI CTYRAG 3 cut(s) 1088, 1195, 1481
SmoI CTYRAG 3 cut(s) 1088, 1195, 1481
SpeI ACTAGT 1 cut(s) 2402
SphI GCATGC 2 cut(s) 1241, 1597
SseBI AGGCCT 1 cut(s) 602
SsiI CCGC 3 cut(s) 1828, 1995, 2317
SspMI CTAG 6 cut(s) 644, 1590, 1953, 2403, 2418, 2466
StuI AGGCCT 1 cut(s) 602
StyD4I CCNGG 3 cut(s) 478, 1253, 1270
StyI CCWWGG 9 cut(s) 285, 335, 736, 773, 856, 990, 1621, 2053, 2552
TaaI ACNGT 6 cut(s) 658, 715, 821, 1961, 2193, 2369
TaiI ACGT 1 cut(s) 1470
TaqI TCGA 6 cut(s) 34, 72, 1062, 1326, 1334, 2283
TatI WGTACW 1 cut(s) 2394
TfiI GAWTC 3 cut(s) 962, 2471, 2545
Tru1I TTAA 5 cut(s) 24, 710, 1089, 1308, 2436
Tru9I TTAA 5 cut(s) 24, 710, 1089, 1308, 2436
TscAI CASTG 6 cut(s) 826, 1057, 1306, 1576, 2133, 2374
TseFI GTSAC 8 cut(s) 136, 821, 902, 1025, 1048, 1297, 1859, 2233
TseI GCWGC 4 cut(s) 1820, 2168, 2325, 2567
Tsp45I GTSAC 8 cut(s) 136, 821, 902, 1025, 1048, 1297, 1859, 2233
TspGWI ACGGA 2 cut(s) 1518, 1661
TspRI CASTG 6 cut(s) 826, 1057, 1306, 1576, 2133, 2374
Van91I CCANNNNNTGG 1 cut(s) 2389
Vha464I CTTAAG 1 cut(s) 1088
VneI GTGCAC 1 cut(s) 688
VpaK11BI GGWCC 4 cut(s) 202, 482, 1844, 2152
XagI CCTNNNNNAGG 1 cut(s) 289
XapI RAATTY 6 cut(s) 37, 458, 749, 2004, 2333, 2482
XceI RCATGY 5 cut(s) 1241, 1597, 1750, 2135, 2362
XcmI CCANNNNNNNNNTGG 1 cut(s) 2386
XmiI GTMKAC 1 cut(s) 344
XmnI GAANNNNTTC 1 cut(s) 1181
XspI CTAG 6 cut(s) 644, 1590, 1953, 2403, 2418, 2466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.