Prupe.7G247900_v2.0.a1

ATP synthesis coupled proton transport

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0003298
Physical Location & Seq
Forward (+)
21048275 .. 21052616
4342 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G247900.2

Sequence Viewer

Length: 504 bp
ATGGAGGTGGGTACTTGGGAACCGGAGTTGACCAACGTCTCCGCCTGCACCCTATGTGTTCCGGCATCAATTTCCCCTGGACGGCTGCTCAGCCCCAGCGTTGGAAAGAATCATGCCTACCAAAAGCTGCCCCAACAGCCCCTTAAGCTCTTCGTTATCAAATTGGACGGCTCTAGCTTTGAGGTGGAAGTTCCGAACACGGCGACGGTGGCCGAACTTAAAGAGGCAGTGAAGGGTGTTTTTAATCAGTCACCAATAGATGAAATGATTTCATGGTCACATGTGTGGGGTCATTTTTGCTTATGTTATCAAGGCCAGAAGCTTCTCGATTATAAGGCATATATCCGACTTTTTGGAATCAAGGATGGCGATCAGATATGTTTTGTGCGGCATGTTTCAATTAAGTATGAGGGCCGGGTAAAGAGACGAATAAGGTTGTGGAGGAAAAGGATTTATGACAGCCCTGCCTACGAACAGCTTGTGATGAACAATCATTACACGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ubiquitin

Protein Analysis

168

Amino Acids

19.16

Weight (kDa)

8.95

Isoelectric Point (pI)

44.99

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 333
AciI CCGC 2 cut(s) 42, 388
AcoI YGGCCR 1 cut(s) 210
AcvI CACGTG 1 cut(s) 501
AfaI GTAC 1 cut(s) 13
AfiI CCNNNNNNNGG 2 cut(s) 81, 101
AflII CTTAAG 1 cut(s) 143
AflIII ACRYGT 2 cut(s) 280, 498
AgsI TTSAA 1 cut(s) 399
AjnI CCWGG 1 cut(s) 76
AleI CACNNNNGTG 1 cut(s) 283
AluBI AGCT 5 cut(s) 127, 148, 177, 322, 478
AluI AGCT 5 cut(s) 127, 148, 177, 322, 478
Alw26I GTCTC 2 cut(s) 43, 418
AoxI GGCC 3 cut(s) 210, 313, 412
ApeKI GCWGC 2 cut(s) 85, 127
AspS9I GGNCC 1 cut(s) 412
AsuC2I CCSGG 1 cut(s) 416
AsuHPI GGTGA 1 cut(s) 243
BbrPI CACGTG 1 cut(s) 501
BbvI GCAGC 2 cut(s) 72, 114
BccI CCATC 1 cut(s) 359
BceAI ACGGC 3 cut(s) 98, 184, 216
BciT130I CCWGG 1 cut(s) 78
BcnI CCSGG 1 cut(s) 416
BcoDI GTCTC 2 cut(s) 43, 418
BfaI CTAG 1 cut(s) 174
BfrI CTTAAG 1 cut(s) 143
BisI GCNGC 3 cut(s) 86, 128, 389
BlpI GCTNAGC 1 cut(s) 89
BlsI GCNGC 3 cut(s) 87, 129, 390
Bme1390I CCNGG 2 cut(s) 78, 416
BmgT120I GGNCC 1 cut(s) 412
BmiI GGNNCC 1 cut(s) 21
BmrFI CCNGG 2 cut(s) 78, 416
BmsI GCATC 1 cut(s) 74
BoxI GACNNNNGTC 1 cut(s) 35
Bpu1102I GCTNAGC 1 cut(s) 89
BpuMI CCSGG 1 cut(s) 416
BsaAI YACGTR 1 cut(s) 501
BsaBI GATNNNNATC 1 cut(s) 369
BsaJI CCNNGG 1 cut(s) 76
BsaWI WCCGGW 1 cut(s) 22
Bsc4I CCNNNNNNNGG 2 cut(s) 81, 101
Bse8I GATNNNNATC 1 cut(s) 369
BseBI CCWGG 1 cut(s) 78
BseDI CCNNGG 1 cut(s) 76
BseGI GGATG 1 cut(s) 370
BseJI GATNNNNATC 1 cut(s) 369
BseLI CCNNNNNNNGG 2 cut(s) 81, 101
BseMII CTCAG 1 cut(s) 103
BseXI GCAGC 2 cut(s) 72, 114
BseYI CCCAGC 1 cut(s) 95
BsgI GTGCAG 1 cut(s) 31
BshFI GGCC 3 cut(s) 212, 315, 414
BsiSI CCGG 3 cut(s) 23, 62, 415
BslI CCNNNNNNNGG 2 cut(s) 81, 101
BsmAI GTCTC 2 cut(s) 43, 418
BsmBI CGTCTC 2 cut(s) 43, 418
BsnI GGCC 3 cut(s) 212, 315, 414
Bsp143I GATC 1 cut(s) 370
Bsp1720I GCTNAGC 1 cut(s) 89
BspACI CCGC 2 cut(s) 42, 388
BspANI GGCC 3 cut(s) 212, 315, 414
BspCNI CTCAG 1 cut(s) 102
BspLI GGNNCC 1 cut(s) 21
BspQI GCTCTTC 1 cut(s) 155
BspTI CTTAAG 1 cut(s) 143
BssECI CCNNGG 1 cut(s) 76
BssMI GATC 1 cut(s) 370
Bst2UI CCWGG 1 cut(s) 78
Bst4CI ACNGT 1 cut(s) 208
Bst6I CTCTTC 1 cut(s) 155
BstAFI CTTAAG 1 cut(s) 143
BstBAI YACGTR 1 cut(s) 501
BstC8I GCNNGC 1 cut(s) 46
BstDEI CTNAG 1 cut(s) 89
BstF5I GGATG 1 cut(s) 370
BstKTI GATC 1 cut(s) 373
BstMAI GTCTC 2 cut(s) 43, 418
BstMBI GATC 1 cut(s) 370
BstMWI GCNNNNNNNGC 3 cut(s) 136, 145, 209
BstNI CCWGG 1 cut(s) 78
BstNSI RCATGY 2 cut(s) 284, 395
BstPAI GACNNNNGTC 1 cut(s) 35
BstSCI CCNGG 2 cut(s) 76, 414
BstV1I GCAGC 2 cut(s) 72, 114
BsuRI GGCC 3 cut(s) 212, 315, 414
BtsCI GGATG 1 cut(s) 370
BtsI GCAGTG 1 cut(s) 234
BtsIMutI CAGTG 1 cut(s) 234
Cac8I GCNNGC 1 cut(s) 46
Cfr13I GGNCC 1 cut(s) 412
Csp6I GTAC 1 cut(s) 12
CviAII CATG 4 cut(s) 113, 273, 281, 392
CviQI GTAC 1 cut(s) 12
DdeI CTNAG 1 cut(s) 89
DpnI GATC 1 cut(s) 372
DpnII GATC 1 cut(s) 370
EaeI YGGCCR 1 cut(s) 210
Eam1104I CTCTTC 1 cut(s) 155
EarI CTCTTC 1 cut(s) 155
EciI GGCGGA 1 cut(s) 31
Eco72I CACGTG 1 cut(s) 501
EcoRII CCWGG 1 cut(s) 76
Esp3I CGTCTC 2 cut(s) 43, 418
FaeI CATG 4 cut(s) 116, 276, 284, 395
FatI CATG 4 cut(s) 112, 272, 280, 391
Fnu4HI GCNGC 3 cut(s) 86, 128, 389
FokI GGATG 1 cut(s) 377
Fsp4HI GCNGC 3 cut(s) 86, 128, 389
FspBI CTAG 1 cut(s) 174
GluI GCNGC 3 cut(s) 86, 128, 389
GsaI CCCAGC 1 cut(s) 99
HaeIII GGCC 3 cut(s) 212, 315, 414
HapII CCGG 3 cut(s) 23, 62, 415
Hin1II CATG 4 cut(s) 116, 276, 284, 395
HincII GTYRAC 1 cut(s) 30
HindII GTYRAC 1 cut(s) 30
HindIII AAGCTT 1 cut(s) 320
HinfI GANTC 2 cut(s) 109, 357
HpaII CCGG 3 cut(s) 23, 62, 415
HphI GGTGA 1 cut(s) 243
Hpy166II GTNNAC 1 cut(s) 30
Hpy188I TCNGA 3 cut(s) 195, 347, 375
Hpy188III TCNNGA 1 cut(s) 326
Hpy8I GTNNAC 1 cut(s) 30
Hpy99I CGWCG 1 cut(s) 208
HpyAV CCTTC 1 cut(s) 226
HpyCH4III ACNGT 1 cut(s) 208
HpyCH4IV ACGT 2 cut(s) 36, 500
HpyCH4V TGCA 1 cut(s) 48
HpyF10VI GCNNNNNNNGC 3 cut(s) 136, 145, 209
HpyF3I CTNAG 1 cut(s) 89
HpySE526I ACGT 2 cut(s) 36, 500
Hsp92II CATG 4 cut(s) 116, 276, 284, 395
Kzo9I GATC 1 cut(s) 370
LguI GCTCTTC 1 cut(s) 155
LpnPI CCDG 9 cut(s) 36, 58, 63, 75, 90, 109, 329, 428, 477
Lsp1109I GCAGC 2 cut(s) 72, 114
LweI GCATC 1 cut(s) 74
MaeI CTAG 1 cut(s) 174
MaeII ACGT 2 cut(s) 36, 500
MaeIII GTNAC 2 cut(s) 249, 276
MalI GATC 1 cut(s) 372
MboI GATC 1 cut(s) 370
MboII GAAGA 1 cut(s) 142
MluCI AATT 3 cut(s) 69, 161, 399
MmeI TCCRAC 2 cut(s) 82, 370
MnlI CCTC 4 cut(s) 175, 217, 403, 435
MseI TTAA 4 cut(s) 144, 219, 243, 402
MslI CAYNNNNRTG 1 cut(s) 283
MspCI CTTAAG 1 cut(s) 143
MspI CCGG 3 cut(s) 23, 62, 415
MspR9I CCNGG 2 cut(s) 78, 416
MvaI CCWGG 1 cut(s) 78
MwoI GCNNNNNNNGC 3 cut(s) 136, 145, 209
NciI CCSGG 1 cut(s) 416
NdeII GATC 1 cut(s) 370
NlaIII CATG 4 cut(s) 116, 276, 284, 395
NlaIV GGNNCC 1 cut(s) 21
NmuCI GTSAC 2 cut(s) 249, 276
NspI RCATGY 2 cut(s) 284, 395
OliI CACNNNNGTG 1 cut(s) 283
PciI ACATGT 1 cut(s) 280
PciSI GCTCTTC 1 cut(s) 155
PfeI GAWTC 2 cut(s) 109, 357
PkrI GCNGC 3 cut(s) 87, 129, 390
PmaCI CACGTG 1 cut(s) 501
PmlI CACGTG 1 cut(s) 501
Ppu21I YACGTR 1 cut(s) 501
PscI ACATGT 1 cut(s) 280
PshAI GACNNNNGTC 1 cut(s) 35
PsiI TTATAA 1 cut(s) 333
Psp6I CCWGG 1 cut(s) 76
PspCI CACGTG 1 cut(s) 501
PspFI CCCAGC 1 cut(s) 95
PspGI CCWGG 1 cut(s) 76
PspN4I GGNNCC 1 cut(s) 21
PspPI GGNCC 1 cut(s) 412
PsrI GAACNNNNNNTAC 1 cut(s) 479
RsaI GTAC 1 cut(s) 13
RsaNI GTAC 1 cut(s) 12
RseI CAYNNNNRTG 1 cut(s) 283
SapI GCTCTTC 1 cut(s) 155
SaqAI TTAA 4 cut(s) 144, 219, 243, 402
SatI GCNGC 3 cut(s) 86, 128, 389
Sau3AI GATC 1 cut(s) 370
Sau96I GGNCC 1 cut(s) 412
ScrFI CCNGG 2 cut(s) 78, 416
SfaNI GCATC 1 cut(s) 74
SmiMI CAYNNNNRTG 1 cut(s) 283
SmlI CTYRAG 1 cut(s) 143
SmoI CTYRAG 1 cut(s) 143
Sse9I AATT 3 cut(s) 69, 161, 399
SsiI CCGC 2 cut(s) 42, 388
SspMI CTAG 1 cut(s) 174
StyD4I CCNGG 2 cut(s) 76, 414
TaaI ACNGT 1 cut(s) 208
TaiI ACGT 2 cut(s) 39, 503
TaqI TCGA 1 cut(s) 327
TasI AATT 3 cut(s) 69, 161, 399
TauI GCSGC 1 cut(s) 391
TfiI GAWTC 2 cut(s) 109, 357
Tru1I TTAA 4 cut(s) 144, 219, 243, 402
Tru9I TTAA 4 cut(s) 144, 219, 243, 402
TscAI CASTG 1 cut(s) 234
TseFI GTSAC 2 cut(s) 249, 276
TseI GCWGC 2 cut(s) 85, 127
Tsp45I GTSAC 2 cut(s) 249, 276
TspDTI ATGAA 3 cut(s) 261, 276, 500
TspRI CASTG 1 cut(s) 234
Vha464I CTTAAG 1 cut(s) 143
XceI RCATGY 2 cut(s) 284, 395
XspI CTAG 1 cut(s) 174
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.