Prupe.7G264100_v2.0.a1

Signal recognition particle receptor subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
Physical Location & Seq
Reverse (-)
21849858 .. 21854389
4532 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G264100.1

Sequence Viewer

Length: 1881 bp
ATGTTAGAACAGTTACTCATATTTACTAGAGGAGGTTTAATCCTTTGGACATGCAAGGAGCTTGGAAATGCTCTTAAAGGATCTCCAATTGACACCTTGATCCGATCCTGTCTTCTAGAGGAACGGTCTGGTGCAGCTTCTTTCGATTACAACGCCCCTGGGGCCGCTTACACCCTCAAATGGACCTTCCATAACGAGCTTGGCCTTGTATTCGTCGCTGTTTATCAAAAGATCCTCCATCTATTGTATGTGGACGAATTGCTTGCAATGGTAAAGCATGAATTCTCAGGGATTTATGATCCGAAAAGAACAGTCTACTCTGATTTCGGCGAAACTTTTCGACAACTTAAGAAGGAGGCTGAGGCTCGTGCTGAGGAATTAAAGAAGTCAAAGCAGGTGGGTAAGCCTGTGAACAATAGTAAGAAGCAAGGTCAGGTGCAGAAGGCTGGACTTGGAGGAGACAAGAAAAAGAATGAAGGTGGTTTGGCAAGTGATGGTGGGGATGGTGATACTATGAAAGGCCGTAGATTGGAGAATGGGAACTCCAATGGTAATCATGTGGATATTAAAGAATCTAATGTGTTTGGTACTGCTAATGGAAAAGAAAATACGAGTTCCAATCTCGGGGCTTTTGATGTAAATAAGCTTCAGAAACTTAGATCTAAGGGTGGGAAGAAGGCAGAGAAAACAGTTACTGTTGATAGCAACGGCTCCAAGGCAGAGCCAAAAAAGAAGATAACAAAGAAGAATAGGGTTTGGGACGATTCACCTCCTGAGTCAAAACTGGATTTTACAGATCCTGTTGATGAGAATGGAGATAACAACACTGAGGTTGTAGCAGCAGATCATGGTGAAAGTATGATGGACAAAGAAGAGGATTTCAGTAGTGAAAGTGAGGCTGAAGAGGAAGAGGAAGGGGAAGTTGGGAAGGAAAGCAAGCCTGATAAGCAAAAGAAGGGATGGTTTTCATCTATGTTCCAGAGTATTGCAGGAAAGGCAAACTTGGAGAGGTCTGACCTGGAACCAGCTTTGAAAGCTCTCAAGGATAGGCTCATGACCAAGAACGTGGCTGAGGAGATAGCTGAGAAGCTTTGTGAATCAGTGGCAACTAGTCTTGAGGGTAAAAAGTTGGCTTCGTTCACAAGAATATCTTCTACTGTACAGGCAGCAATGGAAGAAGCTCTTGTTCGTATTTTAACTCCTAGGCGATCTATTGATATACTGAGGGATGTGCATGCTGCCAGGGAACAAAGGAAGCCATATGTCGTTGTTTTTGTTGGTGTCAATGGAGTTGGGAAATCTACCAATTTGGCTAAGGTTGCTTATTGGCTTCAGCAGCATAATGTCAGTGTTATGATGGCTGCCTGTGATACATTTCGATCAGGAGCTGTTGAGCAGCTGCGTACCCATGCACGTAGACTTCAGATCCCTATTTTTGAGAAGGGCTATGAGAAAGATCCTGCAGTTGTGGCTAAGGAAGCAATCCAGGAGGCCACAAACAATGGTTCTGATGTGGTTCTTGTTGATACAGCTGGTCGAATGCAGGATAATGAACCGTTGATGAGGGCACTGTCAAAGCTGGTCAATCTTAACAATCCAGATCTTGTCTTGTTTGTTGGAGAGGCACTGGTTGGAAATGATGCTGTTGATCAGCTTTCAAAGTTTAATCAGAAATTAGCGGACCTCTCAACTTCGTCTAACCCGAGATTGATAGATGGGATTTTGCTCACTAAGTTTGATACTATTGATGATAAGGTTGGAGCTGCACTGTCGATGGTTTACATATCTGGAGCTCCGGTCATGTTTGTTGGGTGTGGGCAATCATACACAGACCTGAAGAAGCTGAATGTCAAATCAATTGTTAAGACACTCCTGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

627

Amino Acids

68.72

Weight (kDa)

6.77

Isoelectric Point (pI)

29.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 385
Acc36I ACCTGC 1 cut(s) 385
AccI GTMKAC 2 cut(s) 315, 1417
AciI CCGC 2 cut(s) 165, 1679
AclWI GGATC 8 cut(s) 88, 94, 99, 226, 293, 791, 1420, 1451
AcsI RAATTY 1 cut(s) 281
AcuI CTGAAG 5 cut(s) 632, 921, 1316, 1406, 1856
AfaI GTAC 3 cut(s) 589, 1161, 1405
AfiI CCNNNNNNNGG 3 cut(s) 180, 529, 624
AflII CTTAAG 1 cut(s) 347
AgsI TTSAA 2 cut(s) 1033, 1659
AhlI ACTAGT 1 cut(s) 1109
AjnI CCWGG 4 cut(s) 157, 1017, 1241, 1485
AjuI GAANNNNNNNTTGG 2 cut(s) 906, 938
Alw21I GWGCWC 1 cut(s) 1795
Alw26I GTCTC 1 cut(s) 453
AlwI GGATC 8 cut(s) 88, 94, 99, 226, 293, 791, 1420, 1451
AlwNI CAGNNNCTG 3 cut(s) 695, 800, 1388
Ama87I CYCGRG 2 cut(s) 623, 1702
AoxI GGCC 4 cut(s) 162, 202, 520, 1491
ApeKI GCWGC 9 cut(s) 134, 839, 1166, 1238, 1336, 1361, 1396, 1399, 1763
ApoI RAATTY 1 cut(s) 281
Asp700I GAANNNNTTC 2 cut(s) 336, 1150
AspA2I CCTAGG 1 cut(s) 1202
AspS9I GGNCC 3 cut(s) 162, 183, 1681
AsuHPI GGTGA 3 cut(s) 518, 759, 863
AvaI CYCGRG 2 cut(s) 623, 1702
AvaII GGWCC 2 cut(s) 183, 1681
AvrII CCTAGG 1 cut(s) 1202
BaeGI GKGCMC 1 cut(s) 1570
BanII GRGCYC 1 cut(s) 1795
BarI GAAGNNNNNNTAC 2 cut(s) 630, 662
BauI CACGAG 1 cut(s) 366
BbsI GAAGAC 1 cut(s) 104
Bbv12I GWGCWC 1 cut(s) 1795
BbvCI CCTCAGC 3 cut(s) 360, 372, 1071
BbvI GCAGC 9 cut(s) 146, 851, 1178, 1225, 1348, 1348, 1386, 1408, 1750
BccI CCATC 8 cut(s) 246, 488, 497, 856, 954, 1351, 1709, 1768
BceAI ACGGC 2 cut(s) 507, 724
BcgI CGANNNNNNTGC 2 cut(s) 245, 279
BciT130I CCWGG 4 cut(s) 159, 1019, 1243, 1487
BclI TGATCA 1 cut(s) 1648
BcoDI GTCTC 1 cut(s) 453
BcuI ACTAGT 1 cut(s) 1109
BfaI CTAG 4 cut(s) 27, 116, 1110, 1203
BfmI CTRYAG 1 cut(s) 1461
BfrI CTTAAG 1 cut(s) 347
BfuAI ACCTGC 1 cut(s) 385
BglI GCCNNNNNGGC 1 cut(s) 161
BglII AGATCT 2 cut(s) 659, 1600
BlnI CCTAGG 1 cut(s) 1202
Bme1390I CCNGG 4 cut(s) 159, 1019, 1243, 1487
Bme18I GGWCC 2 cut(s) 183, 1681
BmeT110I CYCGRG 2 cut(s) 623, 1702
BmgT120I GGNCC 3 cut(s) 162, 183, 1681
BmiI GGNNCC 3 cut(s) 163, 712, 1023
BmrFI CCNGG 4 cut(s) 159, 1019, 1243, 1487
BmsI GCATC 1 cut(s) 1630
BpiI GAAGAC 1 cut(s) 104
BpmI CTGGAG 1 cut(s) 1809
Bpu10I CCTNAGC 5 cut(s) 360, 372, 1071, 1314, 1473
BpuEI CTTGAG 2 cut(s) 1025, 1136
BsaAI YACGTR 1 cut(s) 1415
BsaJI CCNNGG 5 cut(s) 157, 158, 714, 1202, 1242
BsaWI WCCGGW 1 cut(s) 1795
BsaXI ACNNNNNCTCC 2 cut(s) 1782, 1812
Bsc4I CCNNNNNNNGG 3 cut(s) 180, 529, 624
Bse1I ACTGG 2 cut(s) 789, 1632
Bse3DI GCAATG 2 cut(s) 273, 1176
BseBI CCWGG 4 cut(s) 159, 1019, 1243, 1487
BseDI CCNNGG 5 cut(s) 157, 158, 714, 1202, 1242
BseGI GGATG 3 cut(s) 508, 965, 1234
BseLI CCNNNNNNNGG 3 cut(s) 180, 529, 624
BseMI GCAATG 2 cut(s) 273, 1176
BseMII CTCAG 8 cut(s) 300, 351, 363, 765, 819, 1062, 1074, 1214
BseNI ACTGG 2 cut(s) 789, 1632
BseRI GAGGAG 3 cut(s) 45, 471, 1088
BseSI GKGCMC 1 cut(s) 1570
BseXI GCAGC 9 cut(s) 146, 851, 1178, 1225, 1348, 1348, 1386, 1408, 1750
BsgI GTGCAG 3 cut(s) 153, 458, 1749
BshFI GGCC 4 cut(s) 164, 204, 522, 1493
BsiHKAI GWGCWC 1 cut(s) 1795
BsiHKCI CYCGRG 2 cut(s) 623, 1702
BsiSI CCGG 1 cut(s) 1796
BslFI GGGAC 1 cut(s) 773
BslI CCNNNNNNNGG 3 cut(s) 180, 529, 624
BsmAI GTCTC 1 cut(s) 453
BsmFI GGGAC 1 cut(s) 773
BsmI GAATGC 1 cut(s) 1545
BsnI GGCC 4 cut(s) 164, 204, 522, 1493
BsoBI CYCGRG 2 cut(s) 623, 1702
Bsp1286I GDGCHC 2 cut(s) 1570, 1795
Bsp1407I TGTACA 1 cut(s) 1159
BspACI CCGC 2 cut(s) 165, 1679
BspANI GGCC 4 cut(s) 164, 204, 522, 1493
BspCNI CTCAG 8 cut(s) 299, 352, 364, 766, 820, 1063, 1075, 1215
BspHI TCATGA 1 cut(s) 1053
BspLI GGNNCC 3 cut(s) 163, 712, 1023
BspMAI CTGCAG 1 cut(s) 1465
BspMI ACCTGC 1 cut(s) 385
BspPI GGATC 8 cut(s) 88, 94, 99, 226, 293, 791, 1420, 1451
BspTI CTTAAG 1 cut(s) 347
BsrDI GCAATG 2 cut(s) 273, 1176
BsrGI TGTACA 1 cut(s) 1159
BsrI ACTGG 2 cut(s) 789, 1632
BssECI CCNNGG 5 cut(s) 157, 158, 714, 1202, 1242
BssSI CACGAG 1 cut(s) 366
BssT1I CCWWGG 2 cut(s) 714, 1202
Bst2BI CACGAG 1 cut(s) 366
Bst2UI CCWGG 4 cut(s) 159, 1019, 1243, 1487
Bst4CI ACNGT 9 cut(s) 12, 126, 313, 691, 697, 1159, 1557, 1572, 1770
Bst6I CTCTTC 3 cut(s) 867, 897, 903
BstAFI CTTAAG 1 cut(s) 347
BstAUI TGTACA 1 cut(s) 1159
BstBAI YACGTR 1 cut(s) 1415
BstC8I GCNNGC 3 cut(s) 264, 938, 1236
BstF5I GGATG 3 cut(s) 508, 965, 1234
BstMAI GTCTC 1 cut(s) 453
BstMWI GCNNNNNNNGC 8 cut(s) 161, 946, 995, 1034, 1319, 1336, 1469, 1478
BstNI CCWGG 4 cut(s) 159, 1019, 1243, 1487
BstNSI RCATGY 2 cut(s) 54, 1238
BstSCI CCNGG 4 cut(s) 157, 1017, 1241, 1485
BstSFI CTRYAG 1 cut(s) 1461
BstSLI GKGCMC 1 cut(s) 1570
BstV1I GCAGC 9 cut(s) 146, 851, 1178, 1225, 1348, 1348, 1386, 1408, 1750
BstV2I GAAGAC 1 cut(s) 104
BstX2I RGATCY 7 cut(s) 80, 231, 659, 796, 1425, 1456, 1600
BstXI CCANNNNNNTGG 1 cut(s) 1066
BstYI RGATCY 7 cut(s) 80, 231, 659, 796, 1425, 1456, 1600
BsuRI GGCC 4 cut(s) 164, 204, 522, 1493
BtsCI GGATG 3 cut(s) 508, 965, 1234
BtsIMutI CAGTG 6 cut(s) 825, 1107, 1354, 1568, 1625, 1766
BveI ACCTGC 1 cut(s) 385
Cac8I GCNNGC 3 cut(s) 264, 938, 1236
CaiI CAGNNNCTG 3 cut(s) 695, 800, 1388
CciI TCATGA 1 cut(s) 1053
Cfr13I GGNCC 3 cut(s) 162, 183, 1681
Csp6I GTAC 3 cut(s) 588, 1160, 1404
CspCI CAANNNNNGTGG 2 cut(s) 378, 413
CviAII CATG 8 cut(s) 51, 278, 557, 848, 1054, 1235, 1409, 1801
CviQI GTAC 3 cut(s) 588, 1160, 1404
Eam1104I CTCTTC 3 cut(s) 867, 897, 903
EarI CTCTTC 3 cut(s) 867, 897, 903
Ecl136II GAGCTC 1 cut(s) 1793
Eco130I CCWWGG 2 cut(s) 714, 1202
Eco24I GRGCYC 1 cut(s) 1795
Eco47I GGWCC 2 cut(s) 183, 1681
Eco53kI GAGCTC 1 cut(s) 1793
Eco57I CTGAAG 5 cut(s) 632, 921, 1316, 1406, 1856
Eco88I CYCGRG 2 cut(s) 623, 1702
EcoICRI GAGCTC 1 cut(s) 1793
EcoRI GAATTC 1 cut(s) 281
EcoRII CCWGG 4 cut(s) 157, 1017, 1241, 1485
EcoT14I CCWWGG 2 cut(s) 714, 1202
EcoT38I GRGCYC 1 cut(s) 1795
ErhI CCWWGG 2 cut(s) 714, 1202
FaeI CATG 8 cut(s) 54, 281, 560, 851, 1057, 1238, 1412, 1804
FalI AAGNNNNNCTT 6 cut(s) 986, 1018, 1135, 1167, 1167, 1199
FaqI GGGAC 1 cut(s) 773
FatI CATG 8 cut(s) 50, 277, 556, 847, 1053, 1234, 1408, 1800
FauNDI CATATG 1 cut(s) 1261
FbaI TGATCA 1 cut(s) 1648
FblI GTMKAC 2 cut(s) 315, 1417
FokI GGATG 3 cut(s) 515, 972, 1241
FriOI GRGCYC 1 cut(s) 1795
FspBI CTAG 4 cut(s) 27, 116, 1110, 1203
GsuI CTGGAG 1 cut(s) 1809
HaeIII GGCC 4 cut(s) 164, 204, 522, 1493
HapII CCGG 1 cut(s) 1796
Hin1II CATG 8 cut(s) 54, 281, 560, 851, 1057, 1238, 1412, 1804
HindIII AAGCTT 2 cut(s) 644, 1088
HinfI GANTC 4 cut(s) 572, 764, 776, 1097
HpaII CCGG 1 cut(s) 1796
HphI GGTGA 3 cut(s) 518, 759, 863
Hpy166II GTNNAC 6 cut(s) 253, 316, 412, 1140, 1418, 1780
Hpy188I TCNGA 8 cut(s) 104, 303, 322, 651, 1015, 1425, 1510, 1671
Hpy188III TCNNGA 9 cut(s) 116, 773, 979, 1054, 1115, 1383, 1598, 1788, 1873
Hpy8I GTNNAC 6 cut(s) 253, 316, 412, 1140, 1418, 1780
Hpy99I CGWCG 1 cut(s) 218
HpyAV CCTTC 9 cut(s) 196, 346, 436, 470, 670, 908, 922, 949, 1435
HpyCH4III ACNGT 9 cut(s) 12, 126, 313, 691, 697, 1159, 1557, 1572, 1770
HpyCH4IV ACGT 2 cut(s) 1065, 1414
HpyF10VI GCNNNNNNNGC 8 cut(s) 161, 946, 995, 1034, 1319, 1336, 1469, 1478
HpySE526I ACGT 2 cut(s) 1065, 1414
Hsp92II CATG 8 cut(s) 54, 281, 560, 851, 1057, 1238, 1412, 1804
Ksp22I TGATCA 1 cut(s) 1648
LmnI GCTCC 6 cut(s) 58, 716, 1385, 1760, 1790, 1798
Lsp1109I GCAGC 9 cut(s) 146, 851, 1178, 1225, 1348, 1348, 1386, 1408, 1750
LweI GCATC 1 cut(s) 1630
MaeI CTAG 4 cut(s) 27, 116, 1110, 1203
MaeII ACGT 2 cut(s) 1065, 1414
MaeIII GTNAC 2 cut(s) 12, 691
MfeI CAATTG 2 cut(s) 87, 1857
MflI RGATCY 7 cut(s) 80, 231, 659, 796, 1425, 1456, 1600
MhlI GDGCHC 2 cut(s) 1570, 1795
MluCI AATT 7 cut(s) 87, 257, 281, 377, 1306, 1673, 1857
MlyI GAGTC 1 cut(s) 785
MmeI TCCRAC 3 cut(s) 1597, 1612, 1738
MroXI GAANNNNTTC 2 cut(s) 336, 1150
MseI TTAA 9 cut(s) 38, 75, 348, 380, 567, 1196, 1590, 1665, 1863
MspA1I CMGCKG 2 cut(s) 1399, 1532
MspCI CTTAAG 1 cut(s) 347
MspI CCGG 1 cut(s) 1796
MspR9I CCNGG 4 cut(s) 159, 1019, 1243, 1487
MunI CAATTG 2 cut(s) 87, 1857
Mva1269I GAATGC 1 cut(s) 1545
MvaI CCWGG 4 cut(s) 159, 1019, 1243, 1487
MwoI GCNNNNNNNGC 8 cut(s) 161, 946, 995, 1034, 1319, 1336, 1469, 1478
NdeI CATATG 1 cut(s) 1261
NlaIII CATG 8 cut(s) 54, 281, 560, 851, 1057, 1238, 1412, 1804
NlaIV GGNNCC 3 cut(s) 163, 712, 1023
NspI RCATGY 2 cut(s) 54, 1238
PaeI GCATGC 1 cut(s) 1238
PagI TCATGA 1 cut(s) 1053
PaqCI CACCTGC 1 cut(s) 385
PasI CCCWGGG 1 cut(s) 158
PcsI WCGNNNNNNNCGW 1 cut(s) 1700
PctI GAATGC 1 cut(s) 1545
PdmI GAANNNNTTC 2 cut(s) 336, 1150
PfeI GAWTC 3 cut(s) 572, 764, 1097
PfoI TCCNGGA 1 cut(s) 1485
PleI GAGTC 1 cut(s) 784
PpsI GAGTC 1 cut(s) 784
Ppu21I YACGTR 1 cut(s) 1415
Psp124BI GAGCTC 1 cut(s) 1795
Psp6I CCWGG 4 cut(s) 157, 1017, 1241, 1485
PspGI CCWGG 4 cut(s) 157, 1017, 1241, 1485
PspN4I GGNNCC 3 cut(s) 163, 712, 1023
PspPI GGNCC 3 cut(s) 162, 183, 1681
PstI CTGCAG 1 cut(s) 1465
PstNI CAGNNNCTG 3 cut(s) 695, 800, 1388
PsuI RGATCY 7 cut(s) 80, 231, 659, 796, 1425, 1456, 1600
PvuII CAGCTG 2 cut(s) 1399, 1532
RsaI GTAC 3 cut(s) 589, 1161, 1405
RsaNI GTAC 3 cut(s) 588, 1160, 1404
SacI GAGCTC 1 cut(s) 1795
SaqAI TTAA 9 cut(s) 38, 75, 348, 380, 567, 1196, 1590, 1665, 1863
Sau96I GGNCC 3 cut(s) 162, 183, 1681
SchI GAGTC 1 cut(s) 785
ScrFI CCNGG 4 cut(s) 159, 1019, 1243, 1487
SduI GDGCHC 2 cut(s) 1570, 1795
SfaNI GCATC 1 cut(s) 1630
SfcI CTRYAG 1 cut(s) 1461
SinI GGWCC 2 cut(s) 183, 1681
SmlI CTYRAG 3 cut(s) 347, 1040, 1115
SmoI CTYRAG 3 cut(s) 347, 1040, 1115
SpeI ACTAGT 1 cut(s) 1109
SphI GCATGC 1 cut(s) 1238
Sse9I AATT 7 cut(s) 87, 257, 281, 377, 1306, 1673, 1857
SsiI CCGC 2 cut(s) 165, 1679
SspMI CTAG 4 cut(s) 27, 116, 1110, 1203
SstI GAGCTC 1 cut(s) 1795
StyD4I CCNGG 4 cut(s) 157, 1017, 1241, 1485
StyI CCWWGG 2 cut(s) 714, 1202
TaaI ACNGT 9 cut(s) 12, 126, 313, 691, 697, 1159, 1557, 1572, 1770
TaiI ACGT 2 cut(s) 1068, 1417
TaqI TCGA 5 cut(s) 144, 340, 1378, 1537, 1772
TasI AATT 7 cut(s) 87, 257, 281, 377, 1306, 1673, 1857
TatI WGTACW 1 cut(s) 1159
TauI GCSGC 1 cut(s) 167
TfiI GAWTC 3 cut(s) 572, 764, 1097
Tru1I TTAA 9 cut(s) 38, 75, 348, 380, 567, 1196, 1590, 1665, 1863
Tru9I TTAA 9 cut(s) 38, 75, 348, 380, 567, 1196, 1590, 1665, 1863
TscAI CASTG 6 cut(s) 832, 1107, 1354, 1575, 1632, 1773
TseI GCWGC 9 cut(s) 134, 839, 1166, 1238, 1336, 1361, 1396, 1399, 1763
TspDTI ATGAA 5 cut(s) 294, 489, 530, 957, 1566
TspRI CASTG 6 cut(s) 832, 1107, 1354, 1575, 1632, 1773
Vha464I CTTAAG 1 cut(s) 347
VpaK11BI GGWCC 2 cut(s) 183, 1681
XapI RAATTY 1 cut(s) 281
XbaI TCTAGA 1 cut(s) 115
XceI RCATGY 2 cut(s) 54, 1238
XcmI CCANNNNNNNNNTGG 1 cut(s) 197
XmaJI CCTAGG 1 cut(s) 1202
XmiI GTMKAC 2 cut(s) 315, 1417
XmnI GAANNNNTTC 2 cut(s) 336, 1150
XspI CTAG 4 cut(s) 27, 116, 1110, 1203
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.