Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0002654

Physical Location & Seq

Genomic Coordinates Forward (+)

776387 .. 779436

Gene Structure 3050 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G000910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1848 bp

ATGTTAGAACAGTTACTGATATTTACTAGAGGAGGATTAATCCTCTGGACCTGTAAAGAGCTTGGAAATGCTCTTAAAGGATCGCCGATCGACACTTTGATCCGGTCCTGTCTTTTGGAGGAACGATCCGGTGCAGCATCGTATGATTATACGGCTCCCGGGGCAGCTTACACGCTCAAATGGACCTTCCATAATGAGCTTGGCCTCGTGTTTGTTGCTGTTTACCAGAAGATCCTCCATCTCTTGTATGTGGATGATCTGCTTGCGATGGTGAAGCAGAGCTTCGCGGAGATTTATGATCCGAAAAGGACGGTGTATGATGATTTTGACGAAACTTTCCGACAACTTAGGAAGGAGGCTGAGGCTCGTGCTGAGGAGTTGAAGAAGTCCAAGCAGGTGGGTAAGCCTAAGGCGGGACTTGGAGGAGACAAGAAAAGTAATGAAGGTGGTTTGGCTAGTGATGGTGGGGATGGCAATGCTGTGAAAGGCCGTAAATTGGAGAATGGAATCTCCAATGGTAATCATGTTGTTAGCAAAGAATCTAATGTAGTTGGTACTGCTAACGGAAAAGAGAATACTAGTTCCAATCTCGGGGCTTTTGATGTAAATAAGCTTAAATCTAGATCTAAGGTTGGAAAGAAGACTGAAAAAACAGCTCCCCTTGATAGGAAGGGCTCCAAGGCTGAGCCAAAAAAGAAGATAACCAAGAAAAATAGAGTTTGGGATGATTCTCCTCAAGAGTCGCGTGAGTCAAAATTGGATTTTACAGATACTGTGGGTGAGAATGAAGATAACAATATTGAGGTTGTGGCAGCAGATCATGGTGAAAGTATGATGGATAGGGATGAGGATTACAGTAGTGAAAGTGAGGCTGAAGAGGAAGAGGAAGTTGGAAAGCAAAGCAAGCCTGATTCAAAAAAGAAGGGTTGGTTTTCATCTATGTTTCAGAGTATTGCAGGCAAGGCAAACTTGGAGAGGTCGGATCTGGAACCAGCTTTGAAAGCTCTCAAGGATAGGCTCATGACCAAGAATGTGGCTGAGGAGATAGCTGAGAAGCTTTGTGAATCAGTGGCAGCTAGTCTTGAGGGTAAAAAGTTGGGTTCATTTACAAGAATATCTTCTACAGTTCAGGGAGCAATGGAAGAAGCTCTTGTTCGTATTTTAACTCCTAGGCGCTCTATTGATATACTGAGGGATGTGCATGCTGCCAAGGAGCAGGGCAAGCCTTATGTTGTTGTTTTTGTTGGTGTCAATGGAGTCGGGAAATCTACTAATTTGGCCAAGGTTGCCTATTGGCTCCAGCAGCATCAGGTCAGTGTTATGATGGCTGCATGTGATACATTCCGATCAGGGGCTGTTGAGCAGTTGCGTACTCATGCACGTAGACTCCAGATCCCTATTTTTGAGAAGGGATATGAGAAAGATCCTGCTGTTGTTGCAAAGGAAGCAATCCAGGAGGCCAAACTCAATGGTTCTGATGTGGTTCTTGTTGATACAGCTGGTCGAATGCAGGATAATGAACCATTAATGAGGGCATTGTCAAAGCTTATCTACATTAACAATCCAGATCTTGTCTTGTTTGTTGGAGAGGCACTGGTTGGGAATGATGCTGTCGATCAGCTTTCAAAGTTTAATCAGAAACTGGGTGATCTCTCACCTTCGCCAAACCCCAGATTGATAGATGGAATATTGCTCACCAAGTTTGATACCATTGATGATAAGGTTGGAGCTGCGCTGTCCATGGTTTACATATCTGGAGCCCCGGTCATGTTTGTTGGGTGCGGGCAATCCTACACAGACCTCAAAAAGCTGAATGTCAAATCGATTGTCAAGACTCTCCTGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03060 map03060

Pfam Domains

Protein Families

SRP-alpha_N SRP54 SRP54_N

Protein Analysis

615

Amino Acids

67.52

Weight (kDa)

7.07

Isoelectric Point (pI)

34.76

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SRP-alpha_N	PF04086	28 - 292	6.5e-62	Signal recognition particle, alpha subunit, N-terminal
SRP54_N	PF02881	311 - 377	8.8e-09	SRP54-type protein, helical bundle domain
SRP54	PF00448	410 - 614	3.9e-57	SRP54-type protein, GTPase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30600 AT4G30600
fragaria_vesca	FvH4_1g00830 FvH4_2g11040
malus_domestica	MD02G1006600.v1.1 MD15G1151700.v1.1
prunus_persica	Prupe.7G264100_v2.0.a1
pyrus_communis	pycom02g00550 pycom02g00560 pycom15g13570
rosa_chinensis	RchiOBHm_Chr2g0085561 RchiOBHm_Chr7g0224871 RchiOBHm_Chr7g0224891
rosa_laevigata	RLG00000015699
rosa_multiflora	Rmu_co8208878.1_g000001 Rmu_sc0000307.1_g000005 Rmu_sc0013957.1_g000001 Rmu_sc0014614.1_g000004 Rmu_sc0024179.1_g000002 Rmu_ssc0000347.1_g000004
rosa_roxburghii	Rroxscaffold_2G00155270 Rroxscaffold_3G00234310
rosa_rugosa	Rorug01G0461300 Rorug01G0461300 Rorug01G0461300 Rorug02G0380200 Rorug05G0211800 Rorug07G0226700
rosa_samantha	Rh2AG010200 Rh2BG010800 Rh2CG011700 Rh2DG012700 Rh7AG376500 Rh7AG376700 Rh7BG362200 Rh7CG395200 Rh7DG372200 Rh7DG372300
rosa_wichuraiana	Rw2G000910 Rw7G031400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	385
Acc36I	ACCTGC	1 cut(s)	385
AccI	GTMKAC	1 cut(s)	1384
AccII	CGCG	2 cut(s)	287, 745
AciI	CCGC	3 cut(s)	287, 413, 1782
AclWI	GGATC	8 cut(s)	88, 94, 120, 226, 293, 990, 1387, 1418
AcoI	YGGCCR	1 cut(s)	1278
AcuI	CTGAAG	1 cut(s)	894
AfaI	GTAC	2 cut(s)	556, 1372
AfiI	CCNNNNNNNGG	5 cut(s)	413, 496, 591, 666, 1351
AgsI	TTSAA	4 cut(s)	382, 915, 1000, 1626
AhlI	ACTAGT	1 cut(s)	578
AjnI	CCWGG	1 cut(s)	1452
AjuI	GAANNNNNNNTTGG	2 cut(s)	873, 905
Alw26I	GTCTC	1 cut(s)	420
AlwI	GGATC	8 cut(s)	88, 94, 120, 226, 293, 990, 1387, 1418
AlwNI	CAGNNNCTG	4 cut(s)	16, 773, 1355, 1642
Ama87I	CYCGRG	2 cut(s)	158, 590
AoxI	GGCC	4 cut(s)	202, 487, 1278, 1458
ApeKI	GCWGC	8 cut(s)	134, 164, 812, 1073, 1205, 1303, 1328, 1730
ArsI	GACNNNNNNTTYG	2 cut(s)	1812, 1844
AseI	ATTAAT	2 cut(s)	38, 1526
Asp700I	GAANNNNTTC	1 cut(s)	1117
AspA2I	CCTAGG	1 cut(s)	1169
AspLEI	GCGC	2 cut(s)	1176, 1735
AspS9I	GGNCC	3 cut(s)	48, 105, 183
AsuC2I	CCSGG	3 cut(s)	159, 160, 1763
AsuHPI	GGTGA	6 cut(s)	283, 791, 836, 1647, 1658, 1687
AvaI	CYCGRG	2 cut(s)	158, 590
AvaII	GGWCC	3 cut(s)	48, 105, 183
AvrII	CCTAGG	1 cut(s)	1169
AxyI	CCTNAGG	1 cut(s)	408
BalI	TGGCCA	1 cut(s)	1280
BanII	GRGCYC	2 cut(s)	677, 1762
BauI	CACGAG	2 cut(s)	206, 366
BbsI	GAAGAC	1 cut(s)	647
BbvCI	CCTCAGC	3 cut(s)	360, 372, 1038
BbvI	GCAGC	8 cut(s)	146, 176, 824, 1085, 1192, 1315, 1315, 1717
BccI	CCATC	7 cut(s)	246, 262, 455, 464, 829, 1318, 1676
BceAI	ACGGC	2 cut(s)	168, 474
BciT130I	CCWGG	1 cut(s)	1454
BcnI	CCSGG	3 cut(s)	159, 160, 1763
BcoDI	GTCTC	1 cut(s)	420
BcuI	ACTAGT	1 cut(s)	578
BfaI	CTAG	6 cut(s)	27, 456, 579, 621, 1077, 1170
BfmI	CTRYAG	1 cut(s)	1122
BfoI	RGCGCY	1 cut(s)	1177
BfuAI	ACCTGC	1 cut(s)	385
BglII	AGATCT	2 cut(s)	623, 1567
BisI	GCNGC	8 cut(s)	135, 165, 813, 1074, 1206, 1304, 1329, 1731
BlnI	CCTAGG	1 cut(s)	1169
BlpI	GCTNAGC	1 cut(s)	684
BlsI	GCNGC	8 cut(s)	136, 166, 814, 1075, 1207, 1305, 1330, 1732
Bme1390I	CCNGG	4 cut(s)	159, 160, 1454, 1763
Bme18I	GGWCC	3 cut(s)	48, 105, 183
BmeT110I	CYCGRG	2 cut(s)	158, 590
BmgT120I	GGNCC	3 cut(s)	48, 105, 183
BmiI	GGNNCC	5 cut(s)	156, 676, 990, 1298, 1759
BmrFI	CCNGG	4 cut(s)	159, 160, 1454, 1763
BmrI	ACTGGG	1 cut(s)	1652
BmsI	GCATC	3 cut(s)	146, 1315, 1597
BmuI	ACTGGG	1 cut(s)	1652
BpiI	GAAGAC	1 cut(s)	647
BpmI	CTGGAG	3 cut(s)	1283, 1373, 1776
Bpu10I	CCTNAGC	3 cut(s)	360, 372, 1038
Bpu1102I	GCTNAGC	1 cut(s)	684
BpuEI	CTTGAG	3 cut(s)	720, 992, 1103
BpuMI	CCSGG	3 cut(s)	159, 160, 1763
Bsa29I	ATCGAT	1 cut(s)	1823
BsaAI	YACGTR	1 cut(s)	1382
BsaJI	CCNNGG	8 cut(s)	158, 159, 678, 1169, 1209, 1281, 1740, 1761
BsaWI	WCCGGW	2 cut(s)	102, 128
BsaXI	ACNNNNNCTCC	4 cut(s)	1371, 1401, 1749, 1779
Bsc4I	CCNNNNNNNGG	5 cut(s)	413, 496, 591, 666, 1351
Bse1I	ACTGG	2 cut(s)	1599, 1647
Bse21I	CCTNAGG	1 cut(s)	408
Bse3DI	GCAATG	2 cut(s)	481, 1143
BseBI	CCWGG	1 cut(s)	1454
BseCI	ATCGAT	1 cut(s)	1823
BseDI	CCNNGG	8 cut(s)	158, 159, 678, 1169, 1209, 1281, 1740, 1761
BseGI	GGATG	5 cut(s)	259, 475, 730, 850, 1201
BseLI	CCNNNNNNNGG	5 cut(s)	413, 496, 591, 666, 1351
BseMI	GCAATG	2 cut(s)	481, 1143
BseMII	CTCAG	6 cut(s)	351, 363, 675, 1029, 1041, 1181
BseNI	ACTGG	2 cut(s)	1599, 1647
BseRI	GAGGAG	5 cut(s)	45, 389, 438, 723, 1055
BseXI	GCAGC	8 cut(s)	146, 176, 824, 1085, 1192, 1315, 1315, 1717
BsgI	GTGCAG	1 cut(s)	153
Bsh1236I	CGCG	2 cut(s)	287, 745
Bsh1285I	CGRYCG	1 cut(s)	90
BshFI	GGCC	4 cut(s)	204, 489, 1280, 1460
BshVI	ATCGAT	1 cut(s)	1823
BsiEI	CGRYCG	1 cut(s)	90
BsiHKCI	CYCGRG	2 cut(s)	158, 590
BsiSI	CCGG	4 cut(s)	103, 129, 159, 1763
BslFI	GGGAC	1 cut(s)	429
BslI	CCNNNNNNNGG	5 cut(s)	413, 496, 591, 666, 1351
BsmAI	GTCTC	1 cut(s)	420
BsmFI	GGGAC	1 cut(s)	429
BsmI	GAATGC	1 cut(s)	1512
BsnI	GGCC	4 cut(s)	204, 489, 1280, 1460
BsoBI	CYCGRG	2 cut(s)	158, 590
Bsp1286I	GDGCHC	2 cut(s)	677, 1762
Bsp1720I	GCTNAGC	1 cut(s)	684
Bsp19I	CCATGG	1 cut(s)	1740
BspACI	CCGC	3 cut(s)	287, 413, 1782
BspANI	GGCC	4 cut(s)	204, 489, 1280, 1460
BspCNI	CTCAG	6 cut(s)	352, 364, 676, 1030, 1042, 1182
BspDI	ATCGAT	1 cut(s)	1823
BspFNI	CGCG	2 cut(s)	287, 745
BspHI	TCATGA	1 cut(s)	1020
BspLI	GGNNCC	5 cut(s)	156, 676, 990, 1298, 1759
BspMI	ACCTGC	1 cut(s)	385
BspPI	GGATC	8 cut(s)	88, 94, 120, 226, 293, 990, 1387, 1418
BsrDI	GCAATG	2 cut(s)	481, 1143
BsrI	ACTGG	2 cut(s)	1599, 1647
BssECI	CCNNGG	8 cut(s)	158, 159, 678, 1169, 1209, 1281, 1740, 1761
BssSI	CACGAG	2 cut(s)	206, 366
BssT1I	CCWWGG	5 cut(s)	678, 1169, 1209, 1281, 1740
Bst2BI	CACGAG	2 cut(s)	206, 366
Bst2UI	CCWGG	1 cut(s)	1454
Bst4CI	ACNGT	5 cut(s)	12, 313, 775, 857, 1126
Bst6I	CTCTTC	2 cut(s)	870, 876
BstBAI	YACGTR	1 cut(s)	1382
BstC8I	GCNNGC	6 cut(s)	264, 905, 958, 1203, 1223, 1784
BstDEI	CTNAG	9 cut(s)	347, 360, 372, 408, 627, 684, 1038, 1050, 1190
BstDSI	CCRYGG	1 cut(s)	1740
BstF5I	GGATG	5 cut(s)	259, 475, 730, 850, 1201
BstFNI	CGCG	2 cut(s)	287, 745
BstH2I	RGCGCY	1 cut(s)	1177
BstHHI	GCGC	2 cut(s)	1176, 1735
BstMAI	GTCTC	1 cut(s)	420
BstMCI	CGRYCG	1 cut(s)	90
BstMWI	GCNNNNNNNGC	9 cut(s)	161, 904, 962, 1001, 1222, 1286, 1303, 1436, 1445
BstNI	CCWGG	1 cut(s)	1454
BstNSI	RCATGY	2 cut(s)	1205, 1335
BstSCI	CCNGG	4 cut(s)	157, 158, 1452, 1761
BstSFI	CTRYAG	1 cut(s)	1122
BstUI	CGCG	2 cut(s)	287, 745
BstV1I	GCAGC	8 cut(s)	146, 176, 824, 1085, 1192, 1315, 1315, 1717
BstV2I	GAAGAC	1 cut(s)	647
BstX2I	RGATCY	6 cut(s)	231, 623, 982, 1392, 1423, 1567
BstXI	CCANNNNNNTGG	2 cut(s)	397, 1033
BstYI	RGATCY	6 cut(s)	231, 623, 982, 1392, 1423, 1567
Bsu15I	ATCGAT	1 cut(s)	1823
Bsu36I	CCTNAGG	1 cut(s)	408
BsuRI	GGCC	4 cut(s)	204, 489, 1280, 1460
BsuTUI	ATCGAT	1 cut(s)	1823
BtgI	CCRYGG	1 cut(s)	1740
BtgZI	GCGATG	1 cut(s)	281
BtsCI	GGATG	5 cut(s)	259, 475, 730, 850, 1201
BtsIMutI	CAGTG	3 cut(s)	1074, 1321, 1592
BveI	ACCTGC	1 cut(s)	385
Cac8I	GCNNGC	6 cut(s)	264, 905, 958, 1203, 1223, 1784
CaiI	CAGNNNCTG	4 cut(s)	16, 773, 1355, 1642
CciI	TCATGA	1 cut(s)	1020
CfoI	GCGC	2 cut(s)	1176, 1735
Cfr13I	GGNCC	3 cut(s)	48, 105, 183
Cfr9I	CCCGGG	1 cut(s)	158
ClaI	ATCGAT	1 cut(s)	1823
Csp6I	GTAC	2 cut(s)	555, 1371
CviAII	CATG	8 cut(s)	524, 821, 1021, 1202, 1332, 1376, 1741, 1768
CviQI	GTAC	2 cut(s)	555, 1371
DdeI	CTNAG	9 cut(s)	347, 360, 372, 408, 627, 684, 1038, 1050, 1190
EaeI	YGGCCR	1 cut(s)	1278
Eam1104I	CTCTTC	2 cut(s)	870, 876
EarI	CTCTTC	2 cut(s)	870, 876
Eco130I	CCWWGG	5 cut(s)	678, 1169, 1209, 1281, 1740
Eco24I	GRGCYC	2 cut(s)	677, 1762
Eco47I	GGWCC	3 cut(s)	48, 105, 183
Eco57I	CTGAAG	1 cut(s)	894
Eco81I	CCTNAGG	1 cut(s)	408
Eco88I	CYCGRG	2 cut(s)	158, 590
EcoRII	CCWGG	1 cut(s)	1452
EcoT14I	CCWWGG	5 cut(s)	678, 1169, 1209, 1281, 1740
EcoT38I	GRGCYC	2 cut(s)	677, 1762
ErhI	CCWWGG	5 cut(s)	678, 1169, 1209, 1281, 1740
FaeI	CATG	8 cut(s)	527, 824, 1024, 1205, 1335, 1379, 1744, 1771
FalI	AAGNNNNNCTT	8 cut(s)	266, 298, 953, 985, 1102, 1134, 1134, 1166
FaqI	GGGAC	1 cut(s)	429
FatI	CATG	8 cut(s)	523, 820, 1020, 1201, 1331, 1375, 1740, 1767
FauI	CCCGC	2 cut(s)	406, 1775
FblI	GTMKAC	1 cut(s)	1384
Fnu4HI	GCNGC	8 cut(s)	135, 165, 813, 1074, 1206, 1304, 1329, 1731
FokI	GGATG	5 cut(s)	266, 482, 737, 857, 1208
FriOI	GRGCYC	2 cut(s)	677, 1762
Fsp4HI	GCNGC	8 cut(s)	135, 165, 813, 1074, 1206, 1304, 1329, 1731
FspBI	CTAG	6 cut(s)	27, 456, 579, 621, 1077, 1170
GlaI	GCGC	2 cut(s)	1175, 1734
GluI	GCNGC	8 cut(s)	135, 165, 813, 1074, 1206, 1304, 1329, 1731
GsuI	CTGGAG	3 cut(s)	1283, 1373, 1776
HaeII	RGCGCY	1 cut(s)	1177
HaeIII	GGCC	4 cut(s)	204, 489, 1280, 1460
HapII	CCGG	4 cut(s)	103, 129, 159, 1763
HhaI	GCGC	2 cut(s)	1176, 1735
Hin1II	CATG	8 cut(s)	527, 824, 1024, 1205, 1335, 1379, 1744, 1771
Hin6I	GCGC	2 cut(s)	1174, 1733
HinP1I	GCGC	2 cut(s)	1174, 1733
HindIII	AAGCTT	3 cut(s)	611, 1055, 1544
HpaII	CCGG	4 cut(s)	103, 129, 159, 1763
HphI	GGTGA	6 cut(s)	283, 791, 836, 1647, 1658, 1687
Hpy166II	GTNNAC	3 cut(s)	223, 1385, 1747
Hpy188I	TCNGA	7 cut(s)	303, 341, 948, 982, 1346, 1477, 1638
Hpy8I	GTNNAC	3 cut(s)	223, 1385, 1747
HpyAV	CCTTC	7 cut(s)	196, 346, 437, 664, 916, 1402, 1668
HpyCH4III	ACNGT	5 cut(s)	12, 313, 775, 857, 1126
HpyCH4IV	ACGT	1 cut(s)	1381
HpyCH4V	TGCA	7 cut(s)	134, 956, 1201, 1331, 1379, 1439, 1510
HpyF10VI	GCNNNNNNNGC	9 cut(s)	161, 904, 962, 1001, 1222, 1286, 1303, 1436, 1445
HpyF3I	CTNAG	9 cut(s)	347, 360, 372, 408, 627, 684, 1038, 1050, 1190
HpySE526I	ACGT	1 cut(s)	1381
Hsp92II	CATG	8 cut(s)	527, 824, 1024, 1205, 1335, 1379, 1744, 1771
HspAI	GCGC	2 cut(s)	1174, 1733
LmnI	GCTCC	8 cut(s)	160, 661, 680, 1133, 1213, 1302, 1727, 1757
Lsp1109I	GCAGC	8 cut(s)	146, 176, 824, 1085, 1192, 1315, 1315, 1717
LweI	GCATC	3 cut(s)	146, 1315, 1597
MaeI	CTAG	6 cut(s)	27, 456, 579, 621, 1077, 1170
MaeII	ACGT	1 cut(s)	1381
MaeIII	GTNAC	1 cut(s)	12
MboII	GAAGA	9 cut(s)	241, 394, 652, 709, 800, 887, 893, 1110, 1154
MflI	RGATCY	6 cut(s)	231, 623, 982, 1392, 1423, 1567
MhlI	GDGCHC	2 cut(s)	677, 1762
MlsI	TGGCCA	1 cut(s)	1280
MluCI	AATT	3 cut(s)	494, 755, 1273
MluNI	TGGCCA	1 cut(s)	1280
MlyI	GAGTC	5 cut(s)	749, 758, 1266, 1380, 1828
MmeI	TCCRAC	6 cut(s)	364, 613, 871, 960, 1564, 1705
Mox20I	TGGCCA	1 cut(s)	1280
MroXI	GAANNNNTTC	1 cut(s)	1117
MscI	TGGCCA	1 cut(s)	1280
MseI	TTAA	7 cut(s)	38, 75, 615, 1163, 1526, 1557, 1632
Msp20I	TGGCCA	1 cut(s)	1280
MspA1I	CMGCKG	1 cut(s)	1499
MspI	CCGG	4 cut(s)	103, 129, 159, 1763
MspR9I	CCNGG	4 cut(s)	159, 160, 1454, 1763
Mva1269I	GAATGC	1 cut(s)	1512
MvaI	CCWGG	1 cut(s)	1454
MvnI	CGCG	2 cut(s)	287, 745
MwoI	GCNNNNNNNGC	9 cut(s)	161, 904, 962, 1001, 1222, 1286, 1303, 1436, 1445
NciI	CCSGG	3 cut(s)	159, 160, 1763
NcoI	CCATGG	1 cut(s)	1740
NlaIII	CATG	8 cut(s)	527, 824, 1024, 1205, 1335, 1379, 1744, 1771
NlaIV	GGNNCC	5 cut(s)	156, 676, 990, 1298, 1759
NspI	RCATGY	2 cut(s)	1205, 1335
PaeI	GCATGC	1 cut(s)	1205
PagI	TCATGA	1 cut(s)	1020
PaqCI	CACCTGC	1 cut(s)	385
PctI	GAATGC	1 cut(s)	1512
PdmI	GAANNNNTTC	1 cut(s)	1117
PfeI	GAWTC	5 cut(s)	507, 539, 728, 911, 1064
PfoI	TCCNGGA	1 cut(s)	1452
PkrI	GCNGC	8 cut(s)	136, 166, 814, 1075, 1207, 1305, 1330, 1732
Ple19I	CGATCG	1 cut(s)	90
PleI	GAGTC	5 cut(s)	748, 757, 1265, 1380, 1828
PpsI	GAGTC	5 cut(s)	748, 757, 1265, 1380, 1828
Ppu21I	YACGTR	1 cut(s)	1382
PshBI	ATTAAT	2 cut(s)	38, 1526
Psp6I	CCWGG	1 cut(s)	1452
PspGI	CCWGG	1 cut(s)	1452
PspN4I	GGNNCC	5 cut(s)	156, 676, 990, 1298, 1759
PspPI	GGNCC	3 cut(s)	48, 105, 183
PstNI	CAGNNNCTG	4 cut(s)	16, 773, 1355, 1642
PsuI	RGATCY	6 cut(s)	231, 623, 982, 1392, 1423, 1567
PvuI	CGATCG	1 cut(s)	90
PvuII	CAGCTG	1 cut(s)	1499
RsaI	GTAC	2 cut(s)	556, 1372
RsaNI	GTAC	2 cut(s)	555, 1371
SaqAI	TTAA	7 cut(s)	38, 75, 615, 1163, 1526, 1557, 1632
SatI	GCNGC	8 cut(s)	135, 165, 813, 1074, 1206, 1304, 1329, 1731
Sau96I	GGNCC	3 cut(s)	48, 105, 183
SchI	GAGTC	5 cut(s)	749, 758, 1266, 1380, 1828
ScrFI	CCNGG	4 cut(s)	159, 160, 1454, 1763
SduI	GDGCHC	2 cut(s)	677, 1762
SfaNI	GCATC	3 cut(s)	146, 1315, 1597
SfcI	CTRYAG	1 cut(s)	1122
SinI	GGWCC	3 cut(s)	48, 105, 183
SmaI	CCCGGG	1 cut(s)	160
SmlI	CTYRAG	3 cut(s)	735, 1007, 1082
SmoI	CTYRAG	3 cut(s)	735, 1007, 1082
SpeI	ACTAGT	1 cut(s)	578
SphI	GCATGC	1 cut(s)	1205
Sse9I	AATT	3 cut(s)	494, 755, 1273
SsiI	CCGC	3 cut(s)	287, 413, 1782
SspI	AATATT	2 cut(s)	799, 1689
SspMI	CTAG	6 cut(s)	27, 456, 579, 621, 1077, 1170
StyD4I	CCNGG	4 cut(s)	157, 158, 1452, 1761
StyI	CCWWGG	5 cut(s)	678, 1169, 1209, 1281, 1740
TaaI	ACNGT	5 cut(s)	12, 313, 775, 857, 1126
TaiI	ACGT	1 cut(s)	1384
TaqI	TCGA	4 cut(s)	90, 1504, 1614, 1823
TasI	AATT	3 cut(s)	494, 755, 1273
TfiI	GAWTC	5 cut(s)	507, 539, 728, 911, 1064
Tru1I	TTAA	7 cut(s)	38, 75, 615, 1163, 1526, 1557, 1632
Tru9I	TTAA	7 cut(s)	38, 75, 615, 1163, 1526, 1557, 1632
TscAI	CASTG	3 cut(s)	1074, 1321, 1599
TseI	GCWGC	8 cut(s)	134, 164, 812, 1073, 1205, 1303, 1328, 1730
TspDTI	ATGAA	5 cut(s)	456, 801, 924, 1092, 1533
TspGWI	ACGGA	1 cut(s)	579
TspMI	CCCGGG	1 cut(s)	158
TspRI	CASTG	3 cut(s)	1074, 1321, 1599
VpaK11BI	GGWCC	3 cut(s)	48, 105, 183
VspI	ATTAAT	2 cut(s)	38, 1526
XbaI	TCTAGA	1 cut(s)	620
XceI	RCATGY	2 cut(s)	1205, 1335
XcmI	CCANNNNNNNNNTGG	1 cut(s)	197
XmaI	CCCGGG	1 cut(s)	158
XmaJI	CCTAGG	1 cut(s)	1169
XmiI	GTMKAC	1 cut(s)	1384
XmnI	GAANNNNTTC	1 cut(s)	1117
XspI	CTAG	6 cut(s)	27, 456, 579, 621, 1077, 1170

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.