Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0002654

Physical Location & Seq

Genomic Coordinates Reverse (-)

91636396 .. 91641922

Gene Structure 5527 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00155270.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2343 bp

ATGTTAGAACAGTTACTGATATTTACTAGAGGAGGATTAATCCTCTGGACCTGTAAAGAGCTTGGAAATGCTCTTAAAGGATCGCCGATCGACACTTTGATCCGGTCCTGTCTTTTGGAGGAACGATCTGGTGCAGCATCGTATGATTATACGGCTCCCGGGGCAGCTTACACGCTCAAATGGACCTTCCATAATGAGCTTGGCCTCGTGTTTGTTGCTGTTTACCAGAAGATCCTCCATCTGTTGTATGTGGATGATCTGCTTGCGATGGTGAAGCAGAGCTTCGCGGAGATTTATGATCCGAAAAGGACGGTGTATGATGATTTTGATGAAACTTTCCGACAACTTAGGAAGGAGGCTGAGGCTCGTGCTGAGGAGTTGAAGAAGTCCAAGCAGGTGGGTAAGCCTGTGAGTAATAGTAGGAAGCAAGGGCAGGTGCAGAAGGCAGGACTTGGAGGAGACAAGAAAAGTAATGAAGGTGGTTTGGCTAGTGATGGTGGGGATGGCAATGCTGTGAAAGGCCGTAAATTGGAGAATGGAATCTCCAATGGTAATTATGTTGTTAGCAAAGAATCTAATGTAGTTGGTACTGCTAACGGAAAAGAGAATACTAGTTCCAATCTCGGGGCTTTTGATGTAAATAAGCTTAAATCTAGATCTAAGGTTGGAAAGAAGACTGAAAAAACAGCTTCCCTTGATAGGAAGGGCTCCAAGGCTGAGCCAAAAAAGAAGATGACCAAGAAAAATAGAGTTTGGGATGATTCTCCTCAAGAGTCGCGTGAGTCAAAATTGGATTTTACAGATACTGTGGGTGAGAATGCGGATAACAATATTGAGGTTGTGGCAGCAGATCATGGTGAAAGTATGATGGATAGGGATGAGGATTACAGTAGTGAAAGTGAGGCTGAAGAGGAAGAGGAAGTTGGAAAGCAAAGCAAGCCTGATTCAAAAAGAAGGGTTGGTTTTCATCTATGTTTCAGAGGCAAGGCAAACTTGGAGAGGTCAGATCTGGAACCAGCTTTGAAAGCTCTCAAGGATAGGCTCATGACCAAGAATGTGGCTGAGGAGATAGCTGAGAAGCTTTGTGAATCAGTGGCAGCTAGTCTTGAGGGTAAAAAGTTGGGTTCATTTACAAGAATATCTTCTACAGTTCAGGGAGCAATGGAAGAAGCTCTTGTTCGTATTTTAACTCCTAGGCGCTCTATTGATATACTGAGGGATGTGCATGCTGCCAAGGAGCAGGGCAAGCCTTATGTTGTTGTTTTTGTTGGTGTCAATGGAGTTGGGAAATCTACTAATTTGGCCAAGGTTGAGCTGAATCCTTTTCTTGACATTAGTGAGTGCCTTTTCACCCAAATGGTTTTGTTGACAAATTTTTCTTCCCAGGTTGCCTATTGGCTCCAGCAGCATCAGGTCAGTGTTATGATGGCTGCATGTGATACATTCCGATCAGGGGCTGTTGAGCAGTTGCGTACTCATGCACGTAGACTCCAGATCCCTATTTTTGAGAAGGGATATGAGAAAGATCCTGCTGTTGTTGCAAAGGAAGCAATCCAGGAGGCCAAACTCAATGGTTCTGATGTGGTTCTTGTTGATACAGCTGGTCGAATGCAGGATAATGAACCATTAATGAGGGCATTGTCAAAGCTTATCTACATTAACAATCCAGATCTTGTCTTGTTTGTTGGAGAGGCACTGGTTGGGAATGATGCTGTCGATCAGCTTTCAAAGTTTAATCAGAAACTGGGTGATCTCTCACCTTCACCAAACCCCAGATTGATAGATGGAATATTGCTCACCAAGTTTGATACTATTGATGATAAGGTTGGAGCTGCGCTGTCCATGGTTTACATATCTGGAGCCCCGGTCATGTTTGTTGGGTGCGGGCAATCCTATACAGACCTCAAAAAGCTGAATGTCAAATCGATTAGTGCGGATGAATTGGGTTGGTCGGGATCTTCGACAAAGTGCGGGTGGATCGGGTTGCTTGCAATCTTCAATGGAGTTCTTCGAGATCTGGTTTTTCTCGGTCTTTGGCTGAAGATCGCTTCTCGTTCTCTTTCTACCGATCGGTTTGGGTTTCTCAAAGGTTGGGCTTGGGGTCGAAGGGATATGGATTTTCCGACTTTGGCCACTTTGGAGGTCAAGGGTGGTGTTTGGATTAGTAGATTGCTGCCGTGGTGGTGGAATGGCGTTGCATATGCTCTCGATGGGTTTGCTAGAATGGTGGCGTCAAAGACGGATGGTTCATGTAATGGAGAGACTCCCCTCCCTACACGTATAACGGCGCTTTTAGTATATGGTGTCGCAAGGGGATTGTCTCTCGCTCTAAGGATATATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03060 map03060

Pfam Domains

Protein Families

SRP-alpha_N SRP54 SRP54_N

Protein Analysis

780

Amino Acids

85.85

Weight (kDa)

8.3

Isoelectric Point (pI)

34.64

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SRP-alpha_N	PF04086	28 - 303	1.4e-62	Signal recognition particle, alpha subunit, N-terminal
SRP54_N	PF02881	327 - 385	9.6e-07	SRP54-type protein, helical bundle domain
SRP54	PF00448	459 - 643	1.9e-45	SRP54-type protein, GTPase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30600 AT4G30600
fragaria_vesca	FvH4_1g00830 FvH4_2g11040
malus_domestica	MD02G1006600.v1.1 MD15G1151700.v1.1
prunus_persica	Prupe.7G264100_v2.0.a1
pyrus_communis	pycom02g00550 pycom02g00560 pycom15g13570
rosa_chinensis	RchiOBHm_Chr2g0085561 RchiOBHm_Chr7g0224871 RchiOBHm_Chr7g0224891
rosa_laevigata	RLG00000015699
rosa_multiflora	Rmu_co8208878.1_g000001 Rmu_sc0000307.1_g000005 Rmu_sc0013957.1_g000001 Rmu_sc0014614.1_g000004 Rmu_sc0024179.1_g000002 Rmu_ssc0000347.1_g000004
rosa_roxburghii	Rroxscaffold_2G00155270 Rroxscaffold_3G00234310
rosa_rugosa	Rorug01G0461300 Rorug01G0461300 Rorug01G0461300 Rorug02G0380200 Rorug05G0211800 Rorug07G0226700
rosa_samantha	Rh2AG010200 Rh2BG010800 Rh2CG011700 Rh2DG012700 Rh7AG376500 Rh7AG376700 Rh7BG362200 Rh7CG395200 Rh7DG372200 Rh7DG372300
rosa_wichuraiana	Rw2G000910 Rw7G031400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	385, 424
Acc36I	ACCTGC	2 cut(s)	385, 424
AccI	GTMKAC	1 cut(s)	1486
AccII	CGCG	2 cut(s)	287, 778
AciI	CCGC	5 cut(s)	287, 821, 1884, 1934, 1971
AclWI	GGATC	8 cut(s)	88, 94, 226, 293, 1489, 1520, 1963, 1985
AcoI	YGGCCR	2 cut(s)	1302, 2130
AcsI	RAATTY	1 cut(s)	1372
AcuI	CTGAAG	2 cut(s)	927, 2060
AcyI	GRCGYC	1 cut(s)	2231
AfaI	GTAC	2 cut(s)	589, 1474
AfiI	CCNNNNNNNGG	4 cut(s)	529, 624, 699, 1453
AflIII	ACRYGT	1 cut(s)	2276
AgsI	TTSAA	5 cut(s)	382, 948, 1024, 1728, 1999
AhlI	ACTAGT	1 cut(s)	611
AjnI	CCWGG	2 cut(s)	1383, 1554
AjuI	GAANNNNNNNTTGG	2 cut(s)	906, 938
Alw26I	GTCTC	3 cut(s)	453, 2255, 2325
AlwI	GGATC	8 cut(s)	88, 94, 226, 293, 1489, 1520, 1963, 1985
AlwNI	CAGNNNCTG	4 cut(s)	16, 806, 1457, 1744
Ama87I	CYCGRG	2 cut(s)	158, 623
AoxI	GGCC	5 cut(s)	202, 520, 1302, 1560, 2130
ApeKI	GCWGC	9 cut(s)	134, 164, 845, 1097, 1229, 1405, 1430, 1832, 2173
ApoI	RAATTY	1 cut(s)	1372
AseI	ATTAAT	2 cut(s)	38, 1628
Asp700I	GAANNNNTTC	1 cut(s)	1141
AspA2I	CCTAGG	1 cut(s)	1193
AspLEI	GCGC	3 cut(s)	1200, 1837, 2290
AspS9I	GGNCC	3 cut(s)	48, 105, 183
AsuC2I	CCSGG	3 cut(s)	159, 160, 1865
AsuHPI	GGTGA	8 cut(s)	283, 824, 869, 1342, 1749, 1755, 1760, 1789
AvaI	CYCGRG	2 cut(s)	158, 623
AvaII	GGWCC	3 cut(s)	48, 105, 183
AvrII	CCTAGG	1 cut(s)	1193
BalI	TGGCCA	2 cut(s)	1304, 2132
BanII	GRGCYC	2 cut(s)	710, 1864
BauI	CACGAG	2 cut(s)	206, 366
BbsI	GAAGAC	1 cut(s)	680
BbvCI	CCTCAGC	3 cut(s)	360, 372, 1062
BbvI	GCAGC	9 cut(s)	146, 176, 857, 1109, 1216, 1417, 1417, 1819, 2160
BccI	CCATC	9 cut(s)	246, 262, 488, 497, 862, 1420, 1778, 2204, 2237
BceAI	ACGGC	4 cut(s)	168, 507, 2161, 2301
BcgI	CGANNNNNNTGC	2 cut(s)	2198, 2232
BciT130I	CCWGG	2 cut(s)	1385, 1556
BcnI	CCSGG	3 cut(s)	159, 160, 1865
BcoDI	GTCTC	3 cut(s)	453, 2255, 2325
BcuI	ACTAGT	1 cut(s)	611
BfaI	CTAG	7 cut(s)	27, 489, 612, 654, 1101, 1194, 2220
BfmI	CTRYAG	1 cut(s)	1146
BfoI	RGCGCY	2 cut(s)	1201, 2291
BfuAI	ACCTGC	2 cut(s)	385, 424
BglII	AGATCT	4 cut(s)	656, 1006, 1669, 2014
BisI	GCNGC	9 cut(s)	135, 165, 846, 1098, 1230, 1406, 1431, 1833, 2174
BlnI	CCTAGG	1 cut(s)	1193
BlpI	GCTNAGC	1 cut(s)	717
BlsI	GCNGC	9 cut(s)	136, 166, 847, 1099, 1231, 1407, 1432, 1834, 2175
Bme1390I	CCNGG	5 cut(s)	159, 160, 1385, 1556, 1865
Bme18I	GGWCC	3 cut(s)	48, 105, 183
BmeT110I	CYCGRG	2 cut(s)	158, 623
BmgT120I	GGNCC	3 cut(s)	48, 105, 183
BmiI	GGNNCC	5 cut(s)	156, 709, 1014, 1400, 1861
BmrFI	CCNGG	5 cut(s)	159, 160, 1385, 1556, 1865
BmrI	ACTGGG	1 cut(s)	1754
BmsI	GCATC	3 cut(s)	146, 1417, 1699
BmuI	ACTGGG	1 cut(s)	1754
BpiI	GAAGAC	1 cut(s)	680
BpmI	CTGGAG	3 cut(s)	1385, 1475, 1878
Bpu10I	CCTNAGC	3 cut(s)	360, 372, 1062
Bpu1102I	GCTNAGC	1 cut(s)	717
BpuEI	CTTGAG	3 cut(s)	753, 1016, 1127
BpuMI	CCSGG	3 cut(s)	159, 160, 1865
Bsa29I	ATCGAT	1 cut(s)	1925
BsaAI	YACGTR	2 cut(s)	1484, 2279
BsaHI	GRCGYC	1 cut(s)	2231
BsaWI	WCCGGW	1 cut(s)	102
BsaXI	ACNNNNNCTCC	4 cut(s)	1473, 1503, 1851, 1881
Bsc4I	CCNNNNNNNGG	4 cut(s)	529, 624, 699, 1453
Bse1I	ACTGG	2 cut(s)	1701, 1749
Bse3DI	GCAATG	2 cut(s)	514, 1167
BseBI	CCWGG	2 cut(s)	1385, 1556
BseCI	ATCGAT	1 cut(s)	1925
BseGI	GGATG	7 cut(s)	259, 508, 763, 883, 1225, 1942, 2248
BseLI	CCNNNNNNNGG	4 cut(s)	529, 624, 699, 1453
BseMI	GCAATG	2 cut(s)	514, 1167
BseMII	CTCAG	6 cut(s)	351, 363, 708, 1053, 1065, 1205
BseNI	ACTGG	2 cut(s)	1701, 1749
BseRI	GAGGAG	5 cut(s)	45, 389, 471, 756, 1079
BseXI	GCAGC	9 cut(s)	146, 176, 857, 1109, 1216, 1417, 1417, 1819, 2160
BsgI	GTGCAG	2 cut(s)	153, 458
Bsh1236I	CGCG	2 cut(s)	287, 778
Bsh1285I	CGRYCG	2 cut(s)	90, 2071
BshFI	GGCC	5 cut(s)	204, 522, 1304, 1562, 2132
BshVI	ATCGAT	1 cut(s)	1925
BsiEI	CGRYCG	2 cut(s)	90, 2071
BsiHKCI	CYCGRG	2 cut(s)	158, 623
BsiSI	CCGG	3 cut(s)	103, 159, 1865
BslI	CCNNNNNNNGG	4 cut(s)	529, 624, 699, 1453
BsmAI	GTCTC	3 cut(s)	453, 2255, 2325
BsmI	GAATGC	2 cut(s)	823, 1614
BsnI	GGCC	5 cut(s)	204, 522, 1304, 1562, 2132
BsoBI	CYCGRG	2 cut(s)	158, 623
Bsp1286I	GDGCHC	2 cut(s)	710, 1864
Bsp1720I	GCTNAGC	1 cut(s)	717
Bsp19I	CCATGG	1 cut(s)	1842
BspACI	CCGC	5 cut(s)	287, 821, 1884, 1934, 1971
BspANI	GGCC	5 cut(s)	204, 522, 1304, 1562, 2132
BspCNI	CTCAG	6 cut(s)	352, 364, 709, 1054, 1066, 1206
BspDI	ATCGAT	1 cut(s)	1925
BspFNI	CGCG	2 cut(s)	287, 778
BspHI	TCATGA	1 cut(s)	1044
BspLI	GGNNCC	5 cut(s)	156, 709, 1014, 1400, 1861
BspMI	ACCTGC	2 cut(s)	385, 424
BspPI	GGATC	8 cut(s)	88, 94, 226, 293, 1489, 1520, 1963, 1985
BsrDI	GCAATG	2 cut(s)	514, 1167
BsrI	ACTGG	2 cut(s)	1701, 1749
BssNI	GRCGYC	1 cut(s)	2231
BssSI	CACGAG	2 cut(s)	206, 366
BssT1I	CCWWGG	5 cut(s)	711, 1193, 1233, 1305, 1842
Bst2BI	CACGAG	2 cut(s)	206, 366
Bst2UI	CCWGG	2 cut(s)	1385, 1556
Bst4CI	ACNGT	5 cut(s)	12, 313, 808, 890, 1150
Bst6I	CTCTTC	2 cut(s)	903, 909
BstACI	GRCGYC	1 cut(s)	2231
BstBAI	YACGTR	2 cut(s)	1484, 2279
BstC8I	GCNNGC	6 cut(s)	264, 938, 1227, 1247, 1886, 1989
BstDEI	CTNAG	9 cut(s)	347, 360, 372, 660, 717, 1062, 1074, 1214, 2330
BstDSI	CCRYGG	2 cut(s)	1842, 2177
BstF5I	GGATG	7 cut(s)	259, 508, 763, 883, 1225, 1942, 2248
BstFNI	CGCG	2 cut(s)	287, 778
BstH2I	RGCGCY	2 cut(s)	1201, 2291
BstHHI	GCGC	3 cut(s)	1200, 1837, 2290
BstMAI	GTCTC	3 cut(s)	453, 2255, 2325
BstMCI	CGRYCG	2 cut(s)	90, 2071
BstMWI	GCNNNNNNNGC	7 cut(s)	161, 937, 1025, 1246, 1405, 1538, 1547
BstNI	CCWGG	2 cut(s)	1385, 1556
BstNSI	RCATGY	2 cut(s)	1229, 1437
BstSCI	CCNGG	5 cut(s)	157, 158, 1383, 1554, 1863
BstSFI	CTRYAG	1 cut(s)	1146
BstUI	CGCG	2 cut(s)	287, 778
BstV1I	GCAGC	9 cut(s)	146, 176, 857, 1109, 1216, 1417, 1417, 1819, 2160
BstV2I	GAAGAC	1 cut(s)	680
BstX2I	RGATCY	8 cut(s)	231, 656, 1006, 1494, 1525, 1669, 1955, 2014
BstXI	CCANNNNNNTGG	2 cut(s)	397, 1057
BstYI	RGATCY	8 cut(s)	231, 656, 1006, 1494, 1525, 1669, 1955, 2014
Bsu15I	ATCGAT	1 cut(s)	1925
BsuRI	GGCC	5 cut(s)	204, 522, 1304, 1562, 2132
BsuTUI	ATCGAT	1 cut(s)	1925
BtgI	CCRYGG	2 cut(s)	1842, 2177
BtgZI	GCGATG	1 cut(s)	281
BtsCI	GGATG	7 cut(s)	259, 508, 763, 883, 1225, 1942, 2248
BtsIMutI	CAGTG	3 cut(s)	1098, 1423, 1694
BveI	ACCTGC	2 cut(s)	385, 424
Cac8I	GCNNGC	6 cut(s)	264, 938, 1227, 1247, 1886, 1989
CaiI	CAGNNNCTG	4 cut(s)	16, 806, 1457, 1744
CciI	TCATGA	1 cut(s)	1044
CfoI	GCGC	3 cut(s)	1200, 1837, 2290
Cfr13I	GGNCC	3 cut(s)	48, 105, 183
Cfr9I	CCCGGG	1 cut(s)	158
ClaI	ATCGAT	1 cut(s)	1925
CseI	GACGC	1 cut(s)	2220
Csp6I	GTAC	2 cut(s)	588, 1473
CviAII	CATG	8 cut(s)	854, 1045, 1226, 1434, 1478, 1843, 1870, 2250
CviQI	GTAC	2 cut(s)	588, 1473
DdeI	CTNAG	9 cut(s)	347, 360, 372, 660, 717, 1062, 1074, 1214, 2330
EaeI	YGGCCR	2 cut(s)	1302, 2130
Eam1104I	CTCTTC	2 cut(s)	903, 909
EarI	CTCTTC	2 cut(s)	903, 909
Eco130I	CCWWGG	5 cut(s)	711, 1193, 1233, 1305, 1842
Eco24I	GRGCYC	2 cut(s)	710, 1864
Eco47I	GGWCC	3 cut(s)	48, 105, 183
Eco57I	CTGAAG	2 cut(s)	927, 2060
Eco88I	CYCGRG	2 cut(s)	158, 623
EcoRII	CCWGG	2 cut(s)	1383, 1554
EcoT14I	CCWWGG	5 cut(s)	711, 1193, 1233, 1305, 1842
EcoT38I	GRGCYC	2 cut(s)	710, 1864
ErhI	CCWWGG	5 cut(s)	711, 1193, 1233, 1305, 1842
FaeI	CATG	8 cut(s)	857, 1048, 1229, 1437, 1481, 1846, 1873, 2253
FalI	AAGNNNNNCTT	8 cut(s)	266, 298, 977, 1009, 1126, 1158, 1158, 1190
FatI	CATG	8 cut(s)	853, 1044, 1225, 1433, 1477, 1842, 1869, 2249
FauI	CCCGC	2 cut(s)	1877, 1964
FauNDI	CATATG	1 cut(s)	2200
FblI	GTMKAC	1 cut(s)	1486
Fnu4HI	GCNGC	9 cut(s)	135, 165, 846, 1098, 1230, 1406, 1431, 1833, 2174
FokI	GGATG	7 cut(s)	266, 515, 770, 890, 1232, 1949, 2255
FriOI	GRGCYC	2 cut(s)	710, 1864
Fsp4HI	GCNGC	9 cut(s)	135, 165, 846, 1098, 1230, 1406, 1431, 1833, 2174
FspBI	CTAG	7 cut(s)	27, 489, 612, 654, 1101, 1194, 2220
GlaI	GCGC	3 cut(s)	1199, 1836, 2289
GluI	GCNGC	9 cut(s)	135, 165, 846, 1098, 1230, 1406, 1431, 1833, 2174
GsuI	CTGGAG	3 cut(s)	1385, 1475, 1878
HaeII	RGCGCY	2 cut(s)	1201, 2291
HaeIII	GGCC	5 cut(s)	204, 522, 1304, 1562, 2132
HapII	CCGG	3 cut(s)	103, 159, 1865
HgaI	GACGC	1 cut(s)	2220
HhaI	GCGC	3 cut(s)	1200, 1837, 2290
Hin1I	GRCGYC	1 cut(s)	2231
Hin1II	CATG	8 cut(s)	857, 1048, 1229, 1437, 1481, 1846, 1873, 2253
Hin6I	GCGC	3 cut(s)	1198, 1835, 2288
HinP1I	GCGC	3 cut(s)	1198, 1835, 2288
HincII	GTYRAC	1 cut(s)	1368
HindII	GTYRAC	1 cut(s)	1368
HindIII	AAGCTT	3 cut(s)	644, 1079, 1646
HpaII	CCGG	3 cut(s)	103, 159, 1865
HphI	GGTGA	8 cut(s)	283, 824, 869, 1342, 1749, 1755, 1760, 1789
Hpy166II	GTNNAC	4 cut(s)	223, 1368, 1487, 1849
Hpy188I	TCNGA	8 cut(s)	303, 341, 980, 1006, 1448, 1579, 1740, 2124
Hpy8I	GTNNAC	4 cut(s)	223, 1368, 1487, 1849
HpyAV	CCTTC	9 cut(s)	196, 346, 436, 470, 697, 948, 1504, 1770, 2100
HpyCH4III	ACNGT	5 cut(s)	12, 313, 808, 890, 1150
HpyCH4IV	ACGT	2 cut(s)	1483, 2278
HpyCH4V	TGCA	9 cut(s)	134, 439, 1225, 1433, 1481, 1541, 1612, 1991, 2198
HpyF10VI	GCNNNNNNNGC	7 cut(s)	161, 937, 1025, 1246, 1405, 1538, 1547
HpyF3I	CTNAG	9 cut(s)	347, 360, 372, 660, 717, 1062, 1074, 1214, 2330
HpySE526I	ACGT	2 cut(s)	1483, 2278
Hsp92I	GRCGYC	1 cut(s)	2231
Hsp92II	CATG	8 cut(s)	857, 1048, 1229, 1437, 1481, 1846, 1873, 2253
HspAI	GCGC	3 cut(s)	1198, 1835, 2288
LmnI	GCTCC	7 cut(s)	160, 713, 1157, 1237, 1404, 1829, 1859
Lsp1109I	GCAGC	9 cut(s)	146, 176, 857, 1109, 1216, 1417, 1417, 1819, 2160
LweI	GCATC	3 cut(s)	146, 1417, 1699
MaeI	CTAG	7 cut(s)	27, 489, 612, 654, 1101, 1194, 2220
MaeII	ACGT	2 cut(s)	1483, 2278
MaeIII	GTNAC	1 cut(s)	12
MflI	RGATCY	8 cut(s)	231, 656, 1006, 1494, 1525, 1669, 1955, 2014
MhlI	GDGCHC	2 cut(s)	710, 1864
MlsI	TGGCCA	2 cut(s)	1304, 2132
MluCI	AATT	6 cut(s)	527, 553, 788, 1297, 1372, 1940
MluNI	TGGCCA	2 cut(s)	1304, 2132
MlyI	GAGTC	4 cut(s)	782, 791, 1482, 2257
MmeI	TCCRAC	6 cut(s)	364, 646, 904, 1666, 1807, 2147
Mox20I	TGGCCA	2 cut(s)	1304, 2132
MroXI	GAANNNNTTC	1 cut(s)	1141
MscI	TGGCCA	2 cut(s)	1304, 2132
MseI	TTAA	7 cut(s)	38, 75, 648, 1187, 1628, 1659, 1734
MslI	CAYNNNNRTG	1 cut(s)	1355
Msp20I	TGGCCA	2 cut(s)	1304, 2132
MspA1I	CMGCKG	1 cut(s)	1601
MspI	CCGG	3 cut(s)	103, 159, 1865
MspR9I	CCNGG	5 cut(s)	159, 160, 1385, 1556, 1865
Mva1269I	GAATGC	2 cut(s)	823, 1614
MvaI	CCWGG	2 cut(s)	1385, 1556
MvnI	CGCG	2 cut(s)	287, 778
MwoI	GCNNNNNNNGC	7 cut(s)	161, 937, 1025, 1246, 1405, 1538, 1547
NciI	CCSGG	3 cut(s)	159, 160, 1865
NcoI	CCATGG	1 cut(s)	1842
NdeI	CATATG	1 cut(s)	2200
NlaIII	CATG	8 cut(s)	857, 1048, 1229, 1437, 1481, 1846, 1873, 2253
NlaIV	GGNNCC	5 cut(s)	156, 709, 1014, 1400, 1861
NspI	RCATGY	2 cut(s)	1229, 1437
PaeI	GCATGC	1 cut(s)	1229
PagI	TCATGA	1 cut(s)	1044
PaqCI	CACCTGC	2 cut(s)	385, 424
PcsI	WCGNNNNNNNCGW	1 cut(s)	1958
PctI	GAATGC	2 cut(s)	823, 1614
PdmI	GAANNNNTTC	1 cut(s)	1141
PfeI	GAWTC	6 cut(s)	540, 572, 761, 944, 1088, 1318
PfoI	TCCNGGA	1 cut(s)	1554
PkrI	GCNGC	9 cut(s)	136, 166, 847, 1099, 1231, 1407, 1432, 1834, 2175
Ple19I	CGATCG	2 cut(s)	90, 2071
PleI	GAGTC	4 cut(s)	781, 790, 1482, 2257
PpsI	GAGTC	4 cut(s)	781, 790, 1482, 2257
Ppu21I	YACGTR	2 cut(s)	1484, 2279
PshBI	ATTAAT	2 cut(s)	38, 1628
Psp6I	CCWGG	2 cut(s)	1383, 1554
PspGI	CCWGG	2 cut(s)	1383, 1554
PspN4I	GGNNCC	5 cut(s)	156, 709, 1014, 1400, 1861
PspPI	GGNCC	3 cut(s)	48, 105, 183
PstNI	CAGNNNCTG	4 cut(s)	16, 806, 1457, 1744
PsuI	RGATCY	8 cut(s)	231, 656, 1006, 1494, 1525, 1669, 1955, 2014
PvuI	CGATCG	2 cut(s)	90, 2071
PvuII	CAGCTG	1 cut(s)	1601
RsaI	GTAC	2 cut(s)	589, 1474
RsaNI	GTAC	2 cut(s)	588, 1473
RseI	CAYNNNNRTG	1 cut(s)	1355
SaqAI	TTAA	7 cut(s)	38, 75, 648, 1187, 1628, 1659, 1734
SatI	GCNGC	9 cut(s)	135, 165, 846, 1098, 1230, 1406, 1431, 1833, 2174
Sau96I	GGNCC	3 cut(s)	48, 105, 183
SchI	GAGTC	4 cut(s)	782, 791, 1482, 2257
ScrFI	CCNGG	5 cut(s)	159, 160, 1385, 1556, 1865
SduI	GDGCHC	2 cut(s)	710, 1864
SfaNI	GCATC	3 cut(s)	146, 1417, 1699
SfcI	CTRYAG	1 cut(s)	1146
SinI	GGWCC	3 cut(s)	48, 105, 183
SmaI	CCCGGG	1 cut(s)	160
SmiMI	CAYNNNNRTG	1 cut(s)	1355
SmlI	CTYRAG	3 cut(s)	768, 1031, 1106
SmoI	CTYRAG	3 cut(s)	768, 1031, 1106
SpeI	ACTAGT	1 cut(s)	611
SphI	GCATGC	1 cut(s)	1229
Sse9I	AATT	6 cut(s)	527, 553, 788, 1297, 1372, 1940
SsiI	CCGC	5 cut(s)	287, 821, 1884, 1934, 1971
SspI	AATATT	2 cut(s)	832, 1791
SspMI	CTAG	7 cut(s)	27, 489, 612, 654, 1101, 1194, 2220
StyD4I	CCNGG	5 cut(s)	157, 158, 1383, 1554, 1863
StyI	CCWWGG	5 cut(s)	711, 1193, 1233, 1305, 1842
TaaI	ACNGT	5 cut(s)	12, 313, 808, 890, 1150
TaiI	ACGT	2 cut(s)	1486, 2281
TaqI	TCGA	8 cut(s)	90, 1606, 1716, 1925, 1961, 2011, 2104, 2208
TaqII	GACCGA	1 cut(s)	2018
TasI	AATT	6 cut(s)	527, 553, 788, 1297, 1372, 1940
TfiI	GAWTC	6 cut(s)	540, 572, 761, 944, 1088, 1318
Tru1I	TTAA	7 cut(s)	38, 75, 648, 1187, 1628, 1659, 1734
Tru9I	TTAA	7 cut(s)	38, 75, 648, 1187, 1628, 1659, 1734
TscAI	CASTG	3 cut(s)	1098, 1423, 1701
TseI	GCWGC	9 cut(s)	134, 164, 845, 1097, 1229, 1405, 1430, 1832, 2173
TspDTI	ATGAA	7 cut(s)	345, 489, 956, 1116, 1635, 1953, 2238
TspGWI	ACGGA	2 cut(s)	612, 2255
TspMI	CCCGGG	1 cut(s)	158
TspRI	CASTG	3 cut(s)	1098, 1423, 1701
VpaK11BI	GGWCC	3 cut(s)	48, 105, 183
VspI	ATTAAT	2 cut(s)	38, 1628
XapI	RAATTY	1 cut(s)	1372
XbaI	TCTAGA	1 cut(s)	653
XceI	RCATGY	2 cut(s)	1229, 1437
XcmI	CCANNNNNNNNNTGG	1 cut(s)	197
XmaI	CCCGGG	1 cut(s)	158
XmaJI	CCTAGG	1 cut(s)	1193
XmiI	GTMKAC	1 cut(s)	1486
XmnI	GAANNNNTTC	1 cut(s)	1141
XspI	CTAG	7 cut(s)	27, 489, 612, 654, 1101, 1194, 2220

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.