Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000347.1

Orthogroup ID

OG0002654

Physical Location & Seq

Genomic Coordinates Forward (+)

13936 .. 17843

Gene Structure 3908 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000347.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1953 bp

atgttagaacagttactgatatttactagaggaggattaatcctctggacctgtaaagagcttggaaatgctcttaaaggatcgccgatcgacactttgatccggtcctgtcttttggaggaacgatccggtgcagcatcgtatgattatacggctcccggggcagcttacacgctcaaatggaccttccataatgagcttggcctcgtgtttgttgctgtttaccagaagatcctccatctcttgtatgtggatgatctgcttgcgatggtgaagcagagcttcgcggagatttatgatccaaaaaggacggtgtatgatgattttgacgaaactttccgacaacttaggaaggaggctgaagctcgtgctgaggagttgaagaagtccaagcaggtgggtaagcctgtgagtaatagtaggaagcaagggcaggtgcacaaggcgggacttggaggagacaagaaaagtaatgaaggtggtttggctagtgatggtggggatggcaatgctgtgaaaggccgtaaattggagaatggaatctccaatggtaatcatgttgttagcaaagaatctaatgtagttggtactgctaacggaaaagagaatactagttccaatctcggggcttttgatgtaaataagcttaaatctagatctaaggttggaaagaagactgaaaaaacagctccccttgataggaagggctccaaggctgagccaaaaaagaagataaccaagaaaaatagagtttgggatgattctcctcaagagtcgcgtgagtcaaaattggattttacagatactgtgggtgagaatgaagataacaatattgaggttgtggcagcagatcatggtgaaagtatgatggatagggatgaggattacagtagtgaaagtgaggctgaagaggaagaggaagttggaaagcaaagcaagcctgattcaaaaaagaagggttggttttcatctatgtttcagagtattgcaggcaaggcaaacttggagaggtcggatctggaaccagctttgaaagctctcaaggataggctcatgaccaagaatgtggctgaggagatagctgagaagctttgtgaatcagtggcagctagtcttgagggtaaaaagttgggttcatttacaagaatatcttctacagttcagggagcaatggaagaagctcttgttcgtattttaactcctaggcgctctattgatatactgagggatgtgcatgctgccaaggagcagggcaagccttatgttgttgtttttgttggtgtcaatggagtcgggaaatctactaatttggccaaggttgcctattggctccagcagcatcaggtcagtgttatgatggctgcatgtgatacattccgatcaggggctgttgagcagttgcgtactcatgcacgtagactccagatccctatttttgagaagggatatgagaaagatcctgctgttgttgcaaaggaagcaatccaggaggccaaactcaatggttctgatgtggttcttgttgatacagctggtcgaatgcaggataatgaaccattaatgagggcattgtcaaagcttatctacattaacaatccagatcttgtcttgtttgttggagaggcactggttgggaatgatgctgtcgatcagctttcaaagtttaatcagaaactgggtgatctctcaccttcgccaaaccccagattgatagatggaatattgctcaccaagtttgataccattgatgataaggttggagctgcgctgtccatggtttacatatctggagccccggtcattattgcaggcaaggcaaacttggagaggtcggatctggaaccagctttgaaagctctcaaggataggctcatgaccaagaatgtggctgaggagatagctgagaagctttgtgaatcggaaagatcaaagaaactcaattctgagaagtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko03060 map03060

Pfam Domains

Protein Families

SRP-alpha_N SRP54 SRP54_N

Protein Analysis

650

Amino Acids

71.44

Weight (kDa)

6.77

Isoelectric Point (pI)

37.65

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002654)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G30600 AT4G30600
fragaria_vesca	FvH4_1g00830 FvH4_2g11040
malus_domestica	MD02G1006600.v1.1 MD15G1151700.v1.1
prunus_persica	Prupe.7G264100_v2.0.a1
pyrus_communis	pycom02g00550 pycom02g00560 pycom15g13570
rosa_chinensis	RchiOBHm_Chr2g0085561 RchiOBHm_Chr7g0224871 RchiOBHm_Chr7g0224891
rosa_laevigata	RLG00000015699
rosa_multiflora	Rmu_co8208878.1_g000001 Rmu_sc0000307.1_g000005 Rmu_sc0013957.1_g000001 Rmu_sc0014614.1_g000004 Rmu_sc0024179.1_g000002 Rmu_ssc0000347.1_g000004
rosa_roxburghii	Rroxscaffold_2G00155270 Rroxscaffold_3G00234310
rosa_rugosa	Rorug01G0461300 Rorug01G0461300 Rorug01G0461300 Rorug02G0380200 Rorug05G0211800 Rorug07G0226700
rosa_samantha	Rh2AG010200 Rh2BG010800 Rh2CG011700 Rh2DG012700 Rh7AG376500 Rh7AG376700 Rh7BG362200 Rh7CG395200 Rh7DG372200 Rh7DG372300
rosa_wichuraiana	Rw2G000910 Rw7G031400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	385, 424
Acc36I	ACCTGC	2 cut(s)	385, 424
AccI	GTMKAC	1 cut(s)	1417
AccII	CGCG	2 cut(s)	287, 778
AciI	CCGC	2 cut(s)	287, 446
AclWI	GGATC	9 cut(s)	88, 94, 120, 226, 293, 1023, 1420, 1451, 1842
AcoI	YGGCCR	1 cut(s)	1311
AcuI	CTGAAG	2 cut(s)	381, 927
AfaI	GTAC	2 cut(s)	589, 1405
AfiI	CCNNNNNNNGG	4 cut(s)	529, 624, 699, 1384
AgsI	TTSAA	5 cut(s)	382, 948, 1033, 1659, 1852
AhlI	ACTAGT	1 cut(s)	611
AjnI	CCWGG	1 cut(s)	1485
AjuI	GAANNNNNNNTTGG	2 cut(s)	906, 938
Alw21I	GWGCWC	1 cut(s)	441
Alw26I	GTCTC	1 cut(s)	453
Alw44I	GTGCAC	1 cut(s)	437
AlwI	GGATC	9 cut(s)	88, 94, 120, 226, 293, 1023, 1420, 1451, 1842
AlwNI	CAGNNNCTG	4 cut(s)	16, 806, 1388, 1675
Ama87I	CYCGRG	2 cut(s)	158, 623
AoxI	GGCC	4 cut(s)	202, 520, 1311, 1491
ApaLI	GTGCAC	1 cut(s)	437
ApeKI	GCWGC	8 cut(s)	134, 164, 845, 1106, 1238, 1336, 1361, 1763
AseI	ATTAAT	2 cut(s)	38, 1559
Asp700I	GAANNNNTTC	1 cut(s)	1150
AspA2I	CCTAGG	1 cut(s)	1202
AspLEI	GCGC	2 cut(s)	1209, 1768
AspS9I	GGNCC	3 cut(s)	48, 105, 183
AsuC2I	CCSGG	3 cut(s)	159, 160, 1796
AsuHPI	GGTGA	6 cut(s)	283, 824, 869, 1680, 1691, 1720
AvaI	CYCGRG	2 cut(s)	158, 623
AvaII	GGWCC	3 cut(s)	48, 105, 183
AvrII	CCTAGG	1 cut(s)	1202
BaeGI	GKGCMC	1 cut(s)	441
BalI	TGGCCA	1 cut(s)	1313
BanII	GRGCYC	2 cut(s)	710, 1795
BauI	CACGAG	2 cut(s)	206, 366
BbsI	GAAGAC	1 cut(s)	680
Bbv12I	GWGCWC	1 cut(s)	441
BbvCI	CCTCAGC	3 cut(s)	372, 1071, 1890
BbvI	GCAGC	8 cut(s)	146, 176, 857, 1118, 1225, 1348, 1348, 1750
BccI	CCATC	7 cut(s)	246, 262, 488, 497, 862, 1351, 1709
BceAI	ACGGC	2 cut(s)	168, 507
BciT130I	CCWGG	1 cut(s)	1487
BcnI	CCSGG	3 cut(s)	159, 160, 1796
BcoDI	GTCTC	1 cut(s)	453
BcuI	ACTAGT	1 cut(s)	611
BfaI	CTAG	6 cut(s)	27, 489, 612, 654, 1110, 1203
BfmI	CTRYAG	1 cut(s)	1155
BfoI	RGCGCY	1 cut(s)	1210
BfuAI	ACCTGC	2 cut(s)	385, 424
BglII	AGATCT	2 cut(s)	656, 1600
BisI	GCNGC	8 cut(s)	135, 165, 846, 1107, 1239, 1337, 1362, 1764
BlnI	CCTAGG	1 cut(s)	1202
BlpI	GCTNAGC	1 cut(s)	717
BlsI	GCNGC	8 cut(s)	136, 166, 847, 1108, 1240, 1338, 1363, 1765
Bme1390I	CCNGG	4 cut(s)	159, 160, 1487, 1796
Bme18I	GGWCC	3 cut(s)	48, 105, 183
BmeT110I	CYCGRG	2 cut(s)	158, 623
BmgT120I	GGNCC	3 cut(s)	48, 105, 183
BmiI	GGNNCC	6 cut(s)	156, 709, 1023, 1331, 1792, 1842
BmrFI	CCNGG	4 cut(s)	159, 160, 1487, 1796
BmrI	ACTGGG	1 cut(s)	1685
BmsI	GCATC	3 cut(s)	146, 1348, 1630
BmuI	ACTGGG	1 cut(s)	1685
BpiI	GAAGAC	1 cut(s)	680
BpmI	CTGGAG	3 cut(s)	1316, 1406, 1809
Bpu10I	CCTNAGC	3 cut(s)	372, 1071, 1890
Bpu1102I	GCTNAGC	1 cut(s)	717
BpuEI	CTTGAG	4 cut(s)	753, 1025, 1136, 1844
BpuMI	CCSGG	3 cut(s)	159, 160, 1796
BsaAI	YACGTR	1 cut(s)	1415
BsaJI	CCNNGG	8 cut(s)	158, 159, 711, 1202, 1242, 1314, 1773, 1794
BsaWI	WCCGGW	2 cut(s)	102, 128
BsaXI	ACNNNNNCTCC	4 cut(s)	1404, 1434, 1782, 1812
Bsc4I	CCNNNNNNNGG	4 cut(s)	529, 624, 699, 1384
Bse1I	ACTGG	2 cut(s)	1632, 1680
Bse3DI	GCAATG	2 cut(s)	514, 1176
BseBI	CCWGG	1 cut(s)	1487
BseDI	CCNNGG	8 cut(s)	158, 159, 711, 1202, 1242, 1314, 1773, 1794
BseGI	GGATG	5 cut(s)	259, 508, 763, 883, 1234
BseLI	CCNNNNNNNGG	4 cut(s)	529, 624, 699, 1384
BseMI	GCAATG	2 cut(s)	514, 1176
BseMII	CTCAG	8 cut(s)	363, 708, 1062, 1074, 1214, 1881, 1893, 1935
BseNI	ACTGG	2 cut(s)	1632, 1680
BseRI	GAGGAG	6 cut(s)	45, 389, 471, 756, 1088, 1907
BseSI	GKGCMC	1 cut(s)	441
BseXI	GCAGC	8 cut(s)	146, 176, 857, 1118, 1225, 1348, 1348, 1750
BsgI	GTGCAG	1 cut(s)	153
Bsh1236I	CGCG	2 cut(s)	287, 778
Bsh1285I	CGRYCG	1 cut(s)	90
BshFI	GGCC	4 cut(s)	204, 522, 1313, 1493
BsiEI	CGRYCG	1 cut(s)	90
BsiHKAI	GWGCWC	1 cut(s)	441
BsiHKCI	CYCGRG	2 cut(s)	158, 623
BsiSI	CCGG	4 cut(s)	103, 129, 159, 1796
BslFI	GGGAC	1 cut(s)	462
BslI	CCNNNNNNNGG	4 cut(s)	529, 624, 699, 1384
BsmAI	GTCTC	1 cut(s)	453
BsmFI	GGGAC	1 cut(s)	462
BsmI	GAATGC	1 cut(s)	1545
BsnI	GGCC	4 cut(s)	204, 522, 1313, 1493
BsoBI	CYCGRG	2 cut(s)	158, 623
Bsp1286I	GDGCHC	3 cut(s)	441, 710, 1795
Bsp1720I	GCTNAGC	1 cut(s)	717
Bsp19I	CCATGG	1 cut(s)	1773
BspACI	CCGC	2 cut(s)	287, 446
BspANI	GGCC	4 cut(s)	204, 522, 1313, 1493
BspCNI	CTCAG	8 cut(s)	364, 709, 1063, 1075, 1215, 1882, 1894, 1936
BspFNI	CGCG	2 cut(s)	287, 778
BspHI	TCATGA	2 cut(s)	1053, 1872
BspLI	GGNNCC	6 cut(s)	156, 709, 1023, 1331, 1792, 1842
BspMI	ACCTGC	2 cut(s)	385, 424
BspPI	GGATC	9 cut(s)	88, 94, 120, 226, 293, 1023, 1420, 1451, 1842
BsrDI	GCAATG	2 cut(s)	514, 1176
BsrI	ACTGG	2 cut(s)	1632, 1680
BssECI	CCNNGG	8 cut(s)	158, 159, 711, 1202, 1242, 1314, 1773, 1794
BssSI	CACGAG	2 cut(s)	206, 366
BssT1I	CCWWGG	5 cut(s)	711, 1202, 1242, 1314, 1773
Bst2BI	CACGAG	2 cut(s)	206, 366
Bst2UI	CCWGG	1 cut(s)	1487
Bst4CI	ACNGT	5 cut(s)	12, 313, 808, 890, 1159
Bst6I	CTCTTC	2 cut(s)	903, 909
BstBAI	YACGTR	1 cut(s)	1415
BstC8I	GCNNGC	6 cut(s)	264, 938, 991, 1236, 1256, 1810
BstDSI	CCRYGG	1 cut(s)	1773
BstF5I	GGATG	5 cut(s)	259, 508, 763, 883, 1234
BstFNI	CGCG	2 cut(s)	287, 778
BstH2I	RGCGCY	1 cut(s)	1210
BstHHI	GCGC	2 cut(s)	1209, 1768
BstMAI	GTCTC	1 cut(s)	453
BstMCI	CGRYCG	1 cut(s)	90
BstNI	CCWGG	1 cut(s)	1487
BstNSI	RCATGY	2 cut(s)	1238, 1368
BstSCI	CCNGG	4 cut(s)	157, 158, 1485, 1794
BstSFI	CTRYAG	1 cut(s)	1155
BstSLI	GKGCMC	1 cut(s)	441
BstUI	CGCG	2 cut(s)	287, 778
BstV1I	GCAGC	8 cut(s)	146, 176, 857, 1118, 1225, 1348, 1348, 1750
BstV2I	GAAGAC	1 cut(s)	680
BstX2I	RGATCY	7 cut(s)	231, 656, 1015, 1425, 1456, 1600, 1834
BstXI	CCANNNNNNTGG	3 cut(s)	397, 1066, 1885
BstYI	RGATCY	7 cut(s)	231, 656, 1015, 1425, 1456, 1600, 1834
BsuRI	GGCC	4 cut(s)	204, 522, 1313, 1493
BtgI	CCRYGG	1 cut(s)	1773
BtgZI	GCGATG	1 cut(s)	281
BtsCI	GGATG	5 cut(s)	259, 508, 763, 883, 1234
BtsIMutI	CAGTG	3 cut(s)	1107, 1354, 1625
BveI	ACCTGC	2 cut(s)	385, 424
Cac8I	GCNNGC	6 cut(s)	264, 938, 991, 1236, 1256, 1810
CaiI	CAGNNNCTG	4 cut(s)	16, 806, 1388, 1675
CciI	TCATGA	2 cut(s)	1053, 1872
CfoI	GCGC	2 cut(s)	1209, 1768
Cfr13I	GGNCC	3 cut(s)	48, 105, 183
Cfr9I	CCCGGG	1 cut(s)	158
Csp6I	GTAC	2 cut(s)	588, 1404
CviAII	CATG	8 cut(s)	557, 854, 1054, 1235, 1365, 1409, 1774, 1873
CviQI	GTAC	2 cut(s)	588, 1404
EaeI	YGGCCR	1 cut(s)	1311
Eam1104I	CTCTTC	2 cut(s)	903, 909
EarI	CTCTTC	2 cut(s)	903, 909
Eco130I	CCWWGG	5 cut(s)	711, 1202, 1242, 1314, 1773
Eco24I	GRGCYC	2 cut(s)	710, 1795
Eco47I	GGWCC	3 cut(s)	48, 105, 183
Eco57I	CTGAAG	2 cut(s)	381, 927
Eco88I	CYCGRG	2 cut(s)	158, 623
EcoRII	CCWGG	1 cut(s)	1485
EcoT14I	CCWWGG	5 cut(s)	711, 1202, 1242, 1314, 1773
EcoT38I	GRGCYC	2 cut(s)	710, 1795
ErhI	CCWWGG	5 cut(s)	711, 1202, 1242, 1314, 1773
FaeI	CATG	8 cut(s)	560, 857, 1057, 1238, 1368, 1412, 1777, 1876
FaqI	GGGAC	1 cut(s)	462
FatI	CATG	8 cut(s)	556, 853, 1053, 1234, 1364, 1408, 1773, 1872
FauI	CCCGC	1 cut(s)	439
FblI	GTMKAC	1 cut(s)	1417
Fnu4HI	GCNGC	8 cut(s)	135, 165, 846, 1107, 1239, 1337, 1362, 1764
FokI	GGATG	5 cut(s)	266, 515, 770, 890, 1241
FriOI	GRGCYC	2 cut(s)	710, 1795
Fsp4HI	GCNGC	8 cut(s)	135, 165, 846, 1107, 1239, 1337, 1362, 1764
FspBI	CTAG	6 cut(s)	27, 489, 612, 654, 1110, 1203
GlaI	GCGC	2 cut(s)	1208, 1767
GluI	GCNGC	8 cut(s)	135, 165, 846, 1107, 1239, 1337, 1362, 1764
GsuI	CTGGAG	3 cut(s)	1316, 1406, 1809
HaeII	RGCGCY	1 cut(s)	1210
HaeIII	GGCC	4 cut(s)	204, 522, 1313, 1493
HapII	CCGG	4 cut(s)	103, 129, 159, 1796
HhaI	GCGC	2 cut(s)	1209, 1768
Hin1II	CATG	8 cut(s)	560, 857, 1057, 1238, 1368, 1412, 1777, 1876
Hin6I	GCGC	2 cut(s)	1207, 1766
HinP1I	GCGC	2 cut(s)	1207, 1766
HindIII	AAGCTT	4 cut(s)	644, 1088, 1577, 1907
HpaII	CCGG	4 cut(s)	103, 129, 159, 1796
HphI	GGTGA	6 cut(s)	283, 824, 869, 1680, 1691, 1720
Hpy166II	GTNNAC	4 cut(s)	223, 439, 1418, 1780
Hpy188I	TCNGA	9 cut(s)	341, 981, 1015, 1379, 1510, 1671, 1834, 1921, 1945
Hpy8I	GTNNAC	4 cut(s)	223, 439, 1418, 1780
HpyAV	CCTTC	7 cut(s)	196, 346, 470, 697, 949, 1435, 1701
HpyCH4III	ACNGT	5 cut(s)	12, 313, 808, 890, 1159
HpyCH4IV	ACGT	1 cut(s)	1414
HpyCH4V	TGCA	9 cut(s)	134, 439, 989, 1234, 1364, 1412, 1472, 1543, 1808
HpySE526I	ACGT	1 cut(s)	1414
Hsp92II	CATG	8 cut(s)	560, 857, 1057, 1238, 1368, 1412, 1777, 1876
HspAI	GCGC	2 cut(s)	1207, 1766
LmnI	GCTCC	8 cut(s)	160, 694, 713, 1166, 1246, 1335, 1760, 1790
Lsp1109I	GCAGC	8 cut(s)	146, 176, 857, 1118, 1225, 1348, 1348, 1750
LweI	GCATC	3 cut(s)	146, 1348, 1630
MaeI	CTAG	6 cut(s)	27, 489, 612, 654, 1110, 1203
MaeII	ACGT	1 cut(s)	1414
MaeIII	GTNAC	1 cut(s)	12
MboII	GAAGA	9 cut(s)	241, 394, 685, 742, 833, 920, 926, 1143, 1187
MflI	RGATCY	7 cut(s)	231, 656, 1015, 1425, 1456, 1600, 1834
MhlI	GDGCHC	3 cut(s)	441, 710, 1795
MlsI	TGGCCA	1 cut(s)	1313
MluCI	AATT	4 cut(s)	527, 788, 1306, 1939
MluNI	TGGCCA	1 cut(s)	1313
MlyI	GAGTC	4 cut(s)	782, 791, 1299, 1413
MmeI	TCCRAC	7 cut(s)	364, 646, 904, 993, 1597, 1738, 1812
Mox20I	TGGCCA	1 cut(s)	1313
MroXI	GAANNNNTTC	1 cut(s)	1150
MscI	TGGCCA	1 cut(s)	1313
MseI	TTAA	7 cut(s)	38, 75, 648, 1196, 1559, 1590, 1665
Msp20I	TGGCCA	1 cut(s)	1313
MspA1I	CMGCKG	1 cut(s)	1532
MspI	CCGG	4 cut(s)	103, 129, 159, 1796
MspR9I	CCNGG	4 cut(s)	159, 160, 1487, 1796
Mva1269I	GAATGC	1 cut(s)	1545
MvaI	CCWGG	1 cut(s)	1487
MvnI	CGCG	2 cut(s)	287, 778
NciI	CCSGG	3 cut(s)	159, 160, 1796
NcoI	CCATGG	1 cut(s)	1773
NlaIII	CATG	8 cut(s)	560, 857, 1057, 1238, 1368, 1412, 1777, 1876
NlaIV	GGNNCC	6 cut(s)	156, 709, 1023, 1331, 1792, 1842
NspI	RCATGY	2 cut(s)	1238, 1368
PaeI	GCATGC	1 cut(s)	1238
PagI	TCATGA	2 cut(s)	1053, 1872
PaqCI	CACCTGC	2 cut(s)	385, 424
PctI	GAATGC	1 cut(s)	1545
PdmI	GAANNNNTTC	1 cut(s)	1150
PfeI	GAWTC	6 cut(s)	540, 572, 761, 944, 1097, 1916
PfoI	TCCNGGA	1 cut(s)	1485
PkrI	GCNGC	8 cut(s)	136, 166, 847, 1108, 1240, 1338, 1363, 1765
Ple19I	CGATCG	1 cut(s)	90
PleI	GAGTC	4 cut(s)	781, 790, 1298, 1413
PpsI	GAGTC	4 cut(s)	781, 790, 1298, 1413
Ppu21I	YACGTR	1 cut(s)	1415
PshBI	ATTAAT	2 cut(s)	38, 1559
Psp6I	CCWGG	1 cut(s)	1485
PspGI	CCWGG	1 cut(s)	1485
PspN4I	GGNNCC	6 cut(s)	156, 709, 1023, 1331, 1792, 1842
PspPI	GGNCC	3 cut(s)	48, 105, 183
PstNI	CAGNNNCTG	4 cut(s)	16, 806, 1388, 1675
PsuI	RGATCY	7 cut(s)	231, 656, 1015, 1425, 1456, 1600, 1834
PvuI	CGATCG	1 cut(s)	90
PvuII	CAGCTG	1 cut(s)	1532
RsaI	GTAC	2 cut(s)	589, 1405
RsaNI	GTAC	2 cut(s)	588, 1404
SaqAI	TTAA	7 cut(s)	38, 75, 648, 1196, 1559, 1590, 1665
SatI	GCNGC	8 cut(s)	135, 165, 846, 1107, 1239, 1337, 1362, 1764
Sau96I	GGNCC	3 cut(s)	48, 105, 183
SchI	GAGTC	4 cut(s)	782, 791, 1299, 1413
ScrFI	CCNGG	4 cut(s)	159, 160, 1487, 1796
SduI	GDGCHC	3 cut(s)	441, 710, 1795
SfaNI	GCATC	3 cut(s)	146, 1348, 1630
SfcI	CTRYAG	1 cut(s)	1155
SinI	GGWCC	3 cut(s)	48, 105, 183
SmaI	CCCGGG	1 cut(s)	160
SmlI	CTYRAG	4 cut(s)	768, 1040, 1115, 1859
SmoI	CTYRAG	4 cut(s)	768, 1040, 1115, 1859
SpeI	ACTAGT	1 cut(s)	611
SphI	GCATGC	1 cut(s)	1238
Sse9I	AATT	4 cut(s)	527, 788, 1306, 1939
SsiI	CCGC	2 cut(s)	287, 446
SspI	AATATT	2 cut(s)	832, 1722
SspMI	CTAG	6 cut(s)	27, 489, 612, 654, 1110, 1203
StyD4I	CCNGG	4 cut(s)	157, 158, 1485, 1794
StyI	CCWWGG	5 cut(s)	711, 1202, 1242, 1314, 1773
TaaI	ACNGT	5 cut(s)	12, 313, 808, 890, 1159
TaiI	ACGT	1 cut(s)	1417
TaqI	TCGA	3 cut(s)	90, 1537, 1647
TasI	AATT	4 cut(s)	527, 788, 1306, 1939
TfiI	GAWTC	6 cut(s)	540, 572, 761, 944, 1097, 1916
Tru1I	TTAA	7 cut(s)	38, 75, 648, 1196, 1559, 1590, 1665
Tru9I	TTAA	7 cut(s)	38, 75, 648, 1196, 1559, 1590, 1665
TscAI	CASTG	3 cut(s)	1107, 1354, 1632
TseI	GCWGC	8 cut(s)	134, 164, 845, 1106, 1238, 1336, 1361, 1763
TspDTI	ATGAA	5 cut(s)	489, 834, 957, 1125, 1566
TspGWI	ACGGA	1 cut(s)	612
TspMI	CCCGGG	1 cut(s)	158
TspRI	CASTG	3 cut(s)	1107, 1354, 1632
VneI	GTGCAC	1 cut(s)	437
VpaK11BI	GGWCC	3 cut(s)	48, 105, 183
VspI	ATTAAT	2 cut(s)	38, 1559
XbaI	TCTAGA	1 cut(s)	653
XceI	RCATGY	2 cut(s)	1238, 1368
XcmI	CCANNNNNNNNNTGG	1 cut(s)	197
XmaI	CCCGGG	1 cut(s)	158
XmaJI	CCTAGG	1 cut(s)	1202
XmiI	GTMKAC	1 cut(s)	1417
XmnI	GAANNNNTTC	1 cut(s)	1150
XspI	CTAG	6 cut(s)	27, 489, 612, 654, 1110, 1203

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.