Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0004445

Physical Location & Seq

Genomic Coordinates Forward (+)

10782328 .. 10783949

Gene Structure 1622 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G074000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 807 bp

ATGGGATTATTGATGCCAAATTTCCATTACCAATCACCATTAGAAACTGGAATTGTTGCTACTACATCAAAACCCTGGGATTTTACTTTGGTAACTGAACAAAAAGGGAGGAATCCAGCTCAATCCATTCCCACAATAAAGAAGAGGGATCATGGAGACAAGGACCCCAGCAAGAATACTAGCAATAACCCTAATTCTGACATCTTTTCTAGTTTTTCCTCAAGAACTTCAGCAGAGCAAGAAGAGTTGGATACATTAAGGGTACAAGTGGGTGATCAACAAAGAAAAGTATCAGAGGAGGAGGAACTTTTAAAGTCATCGGAGATATCAAAGGACCAAATGAAAGCTATTCAAGCAAAACTTGACGAAATGAAGCACCAAGTTTCAGAAAAGGATGCATTAATCAAGGCTGCTAAGCTACAACTCACTGATGCAAAGATTAAGCTTGCAGATAAGCAAGCTGCTTTGGAGAAGTTACAGTGGGAACCAATGATATCTAACAGGAAAGTGGAGAAGCTTCAAGAAGAGCTCGACTCCTTGCAAGGACAGATTTCATCATTTATGTTCCTATTTGAAGGCTTGATGAAAGCTGATGCCATTGTATACAGTGAAGATTATGATATTTCACCTTGCACTGTGGATCATCTTTCTCATATCGATGATTTGGATGAGACGTGGATGCAGAAAGTGGAAGAAGCTAGAAAAGCTTACATCACTGTTGTTGCTGCTACAAAAGAAAAGCAAGATGAAGAATCTATTGCTGCTGCAGCCAGTGCAAGGTTACATCTTCAATCATTGGTTCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001101 GO:0002230 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003002 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0006810 GO:0006950 GO:0006952 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0007389 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009615 GO:0009628 GO:0009987 GO:0010035 GO:0010375 GO:0010496 GO:0010497 GO:0015630 GO:0016043 GO:0030865 GO:0031122 GO:0031347 GO:0032101 GO:0032501 GO:0032502 GO:0032879 GO:0032880 GO:0033043 GO:0042221 GO:0043207 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0043900 GO:0044424 GO:0044464 GO:0048519 GO:0048583 GO:0048856 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051128 GO:0051179 GO:0051223 GO:0051224 GO:0051234 GO:0051493 GO:0051607 GO:0051704 GO:0051707 GO:0065007 GO:0070201 GO:0071840 GO:0080134 GO:0090087 GO:0097159 GO:0097435 GO:0098542 GO:1901363 GO:1901700 GO:1904950

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

269

Amino Acids

30.21

Weight (kDa)

5.07

Isoelectric Point (pI)

48.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004445)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08120 AT5G08120
fragaria_vesca	FvH4_5g13401
malus_domestica	MD06G1205700.v1.1 MD14G1216600.v1.1
prunus_persica	Prupe.5G210000_v2.0.a1 Prupe.5G210000_v2.0.a1 Prupe.8G074000_v2.0.a1
pyrus_communis	pycom06g18350 pycom14g17940
rosa_chinensis	RchiOBHm_Chr4g0401411 RchiOBHm_Chr4g0419941 RchiOBHm_Chr7g0183731 RchiOBHm_Chr7g0231071
rosa_laevigata	RLG00000005028 RLG00000017072
rosa_multiflora	Rmu_co7992950.1_g000001 Rmu_sc0003610.1_g000029
rosa_roxburghii	Rroxscaffold_3G00270290
rosa_rugosa	Rorug06G0456900 Rorug06G0459600 Rorug07G0184000
rosa_samantha	Rh1AG064200 Rh4BG064900 Rh4BG101700 Rh4CG071700 Rh6AG168600 Rh7AG060500 Rh7BG060600 Rh7CG062200 Rh7DG060600
rosa_wichuraiana	Rw7G005020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	603
AclWI	GGATC	2 cut(s)	156, 648
AcsI	RAATTY	1 cut(s)	19
AcuI	CTGAAG	1 cut(s)	213
AfaI	GTAC	1 cut(s)	264
AfiI	CCNNNNNNNGG	1 cut(s)	777
AgsI	TTSAA	4 cut(s)	353, 521, 575, 791
AjiI	CACGTC	1 cut(s)	675
AjnI	CCWGG	1 cut(s)	74
Alw21I	GWGCWC	1 cut(s)	531
Alw26I	GTCTC	2 cut(s)	150, 665
AlwI	GGATC	2 cut(s)	156, 648
ApeKI	GCWGC	6 cut(s)	410, 461, 725, 761, 764, 767
ApoI	RAATTY	1 cut(s)	19
AseI	ATTAAT	1 cut(s)	401
AspS9I	GGNCC	2 cut(s)	163, 334
AsuHPI	GGTGA	3 cut(s)	27, 284, 618
AvaII	GGWCC	2 cut(s)	163, 334
BanII	GRGCYC	1 cut(s)	531
Bbv12I	GWGCWC	1 cut(s)	531
BbvI	GCAGC	6 cut(s)	397, 448, 712, 748, 751, 779
BciT130I	CCWGG	1 cut(s)	76
BciVI	GTATCC	1 cut(s)	244
BclI	TGATCA	1 cut(s)	274
BcoDI	GTCTC	2 cut(s)	150, 665
BfaI	CTAG	3 cut(s)	180, 210, 699
BfmI	CTRYAG	1 cut(s)	765
BfuI	GTATCC	1 cut(s)	244
BisI	GCNGC	6 cut(s)	411, 462, 726, 762, 765, 768
BlpI	GCTNAGC	1 cut(s)	414
BlsI	GCNGC	6 cut(s)	412, 463, 727, 763, 766, 769
Bme1390I	CCNGG	1 cut(s)	76
Bme18I	GGWCC	2 cut(s)	163, 334
BmgBI	CACGTC	1 cut(s)	675
BmgT120I	GGNCC	2 cut(s)	163, 334
BmiI	GGNNCC	2 cut(s)	165, 486
BmrFI	CCNGG	1 cut(s)	76
BmsI	GCATC	5 cut(s)	3, 385, 421, 583, 669
BplI	GAGNNNNNCTC	2 cut(s)	518, 550
Bpu1102I	GCTNAGC	1 cut(s)	414
BpuEI	CTTGAG	1 cut(s)	205
Bsa29I	ATCGAT	1 cut(s)	657
BsaJI	CCNNGG	2 cut(s)	74, 75
Bsc4I	CCNNNNNNNGG	1 cut(s)	777
Bse1I	ACTGG	2 cut(s)	52, 771
BseBI	CCWGG	1 cut(s)	76
BseCI	ATCGAT	1 cut(s)	657
BseDI	CCNNGG	2 cut(s)	74, 75
BseGI	GGATG	3 cut(s)	400, 673, 684
BseLI	CCNNNNNNNGG	1 cut(s)	777
BseNI	ACTGG	2 cut(s)	52, 771
BseRI	GAGGAG	2 cut(s)	311, 314
BseXI	GCAGC	6 cut(s)	397, 448, 712, 748, 751, 779
BseYI	CCCAGC	1 cut(s)	167
BshVI	ATCGAT	1 cut(s)	657
BsiHKAI	GWGCWC	1 cut(s)	531
BslI	CCNNNNNNNGG	1 cut(s)	777
BsmAI	GTCTC	2 cut(s)	150, 665
BsmBI	CGTCTC	1 cut(s)	665
Bsp1286I	GDGCHC	1 cut(s)	531
Bsp143I	GATC	3 cut(s)	148, 274, 640
Bsp1720I	GCTNAGC	1 cut(s)	414
BspDI	ATCGAT	1 cut(s)	657
BspLI	GGNNCC	2 cut(s)	165, 486
BspMAI	CTGCAG	1 cut(s)	769
BspPI	GGATC	2 cut(s)	156, 648
BspQI	GCTCTTC	1 cut(s)	519
BsrI	ACTGG	2 cut(s)	52, 771
BssECI	CCNNGG	2 cut(s)	74, 75
BssMI	GATC	3 cut(s)	148, 274, 640
BssNAI	GTATAC	1 cut(s)	604
Bst1107I	GTATAC	1 cut(s)	604
Bst2UI	CCWGG	1 cut(s)	76
Bst4CI	ACNGT	4 cut(s)	480, 608, 637, 718
Bst6I	CTCTTC	3 cut(s)	137, 237, 519
BstAPI	GCANNNNNTGC	1 cut(s)	773
BstC8I	GCNNGC	2 cut(s)	447, 459
BstDEI	CTNAG	1 cut(s)	414
BstF5I	GGATG	3 cut(s)	400, 673, 684
BstKTI	GATC	3 cut(s)	151, 277, 643
BstMAI	GTCTC	2 cut(s)	150, 665
BstMBI	GATC	3 cut(s)	148, 274, 640
BstMWI	GCNNNNNNNGC	4 cut(s)	353, 704, 767, 773
BstNI	CCWGG	1 cut(s)	76
BstSCI	CCNGG	1 cut(s)	74
BstSFI	CTRYAG	1 cut(s)	765
BstV1I	GCAGC	6 cut(s)	397, 448, 712, 748, 751, 779
BstZ17I	GTATAC	1 cut(s)	604
Bsu15I	ATCGAT	1 cut(s)	657
BsuI	GTATCC	1 cut(s)	244
BsuTUI	ATCGAT	1 cut(s)	657
BtrI	CACGTC	1 cut(s)	675
BtsCI	GGATG	3 cut(s)	400, 673, 684
BtsIMutI	CAGTG	6 cut(s)	426, 485, 613, 633, 714, 778
Cac8I	GCNNGC	2 cut(s)	447, 459
Cfr13I	GGNCC	2 cut(s)	163, 334
ClaI	ATCGAT	1 cut(s)	657
Csp6I	GTAC	1 cut(s)	263
CviAII	CATG	1 cut(s)	152
CviQI	GTAC	1 cut(s)	263
DdeI	CTNAG	1 cut(s)	414
DpnI	GATC	3 cut(s)	150, 276, 642
DpnII	GATC	3 cut(s)	148, 274, 640
DraI	TTTAAA	1 cut(s)	312
Eam1104I	CTCTTC	3 cut(s)	137, 237, 519
EarI	CTCTTC	3 cut(s)	137, 237, 519
Ecl136II	GAGCTC	1 cut(s)	529
Eco24I	GRGCYC	1 cut(s)	531
Eco32I	GATATC	2 cut(s)	327, 495
Eco47I	GGWCC	2 cut(s)	163, 334
Eco53kI	GAGCTC	1 cut(s)	529
Eco57I	CTGAAG	1 cut(s)	213
EcoICRI	GAGCTC	1 cut(s)	529
EcoO109I	RGGNCCY	1 cut(s)	163
EcoRII	CCWGG	1 cut(s)	74
EcoRV	GATATC	2 cut(s)	327, 495
EcoT22I	ATGCAT	1 cut(s)	400
EcoT38I	GRGCYC	1 cut(s)	531
Esp3I	CGTCTC	1 cut(s)	665
FaeI	CATG	1 cut(s)	155
FaiI	YATR	5 cut(s)	153, 563, 604, 618, 654
FalI	AAGNNNNNCTT	2 cut(s)	345, 377
FatI	CATG	1 cut(s)	151
FbaI	TGATCA	1 cut(s)	274
FblI	GTMKAC	1 cut(s)	603
Fnu4HI	GCNGC	6 cut(s)	411, 462, 726, 762, 765, 768
FokI	GGATG	3 cut(s)	407, 680, 691
FriOI	GRGCYC	1 cut(s)	531
Fsp4HI	GCNGC	6 cut(s)	411, 462, 726, 762, 765, 768
FspBI	CTAG	3 cut(s)	180, 210, 699
GluI	GCNGC	6 cut(s)	411, 462, 726, 762, 765, 768
GsaI	CCCAGC	1 cut(s)	171
Hin1II	CATG	1 cut(s)	155
HindIII	AAGCTT	3 cut(s)	443, 515, 705
HinfI	GANTC	3 cut(s)	112, 533, 752
HphI	GGTGA	3 cut(s)	27, 284, 618
Hpy166II	GTNNAC	1 cut(s)	604
Hpy188I	TCNGA	4 cut(s)	199, 295, 322, 388
Hpy188III	TCNNGA	2 cut(s)	222, 521
Hpy8I	GTNNAC	1 cut(s)	604
HpyAV	CCTTC	1 cut(s)	569
HpyCH4III	ACNGT	4 cut(s)	480, 608, 637, 718
HpyCH4IV	ACGT	1 cut(s)	674
HpyCH4V	TGCA	8 cut(s)	398, 434, 449, 541, 633, 682, 767, 776
HpyF10VI	GCNNNNNNNGC	4 cut(s)	353, 704, 767, 773
HpyF3I	CTNAG	1 cut(s)	414
HpySE526I	ACGT	1 cut(s)	674
Hsp92II	CATG	1 cut(s)	155
Ksp22I	TGATCA	1 cut(s)	274
Kzo9I	GATC	3 cut(s)	148, 274, 640
LguI	GCTCTTC	1 cut(s)	519
LpnPI	CCDG	7 cut(s)	33, 61, 88, 129, 181, 487, 784
Lsp1109I	GCAGC	6 cut(s)	397, 448, 712, 748, 751, 779
LweI	GCATC	5 cut(s)	3, 385, 421, 583, 669
MaeI	CTAG	3 cut(s)	180, 210, 699
MaeII	ACGT	1 cut(s)	674
MaeIII	GTNAC	3 cut(s)	91, 474, 780
MalI	GATC	3 cut(s)	150, 276, 642
MboI	GATC	3 cut(s)	148, 274, 640
MboII	GAAGA	7 cut(s)	154, 254, 536, 623, 704, 761, 779
MhlI	GDGCHC	1 cut(s)	531
MluCI	AATT	3 cut(s)	19, 51, 193
MlyI	GAGTC	1 cut(s)	527
MmeI	TCCRAC	1 cut(s)	228
MnlI	CCTC	6 cut(s)	102, 138, 229, 289, 292, 295
Mph1103I	ATGCAT	1 cut(s)	400
MseI	TTAA	4 cut(s)	257, 311, 401, 441
MslI	CAYNNNNRTG	1 cut(s)	657
MspR9I	CCNGG	1 cut(s)	76
MvaI	CCWGG	1 cut(s)	76
MwoI	GCNNNNNNNGC	4 cut(s)	353, 704, 767, 773
NdeII	GATC	3 cut(s)	148, 274, 640
NlaIII	CATG	1 cut(s)	155
NlaIV	GGNNCC	2 cut(s)	165, 486
NsiI	ATGCAT	1 cut(s)	400
PasI	CCCWGGG	1 cut(s)	75
PciSI	GCTCTTC	1 cut(s)	519
PfeI	GAWTC	2 cut(s)	112, 752
PkrI	GCNGC	6 cut(s)	412, 463, 727, 763, 766, 769
PleI	GAGTC	1 cut(s)	527
PpsI	GAGTC	1 cut(s)	527
PpuMI	RGGWCCY	1 cut(s)	163
PshBI	ATTAAT	1 cut(s)	401
Psp124BI	GAGCTC	1 cut(s)	531
Psp5II	RGGWCCY	1 cut(s)	163
Psp6I	CCWGG	1 cut(s)	74
PspFI	CCCAGC	1 cut(s)	167
PspGI	CCWGG	1 cut(s)	74
PspN4I	GGNNCC	2 cut(s)	165, 486
PspPI	GGNCC	2 cut(s)	163, 334
PspPPI	RGGWCCY	1 cut(s)	163
PstI	CTGCAG	1 cut(s)	769
RsaI	GTAC	1 cut(s)	264
RsaNI	GTAC	1 cut(s)	263
RseI	CAYNNNNRTG	1 cut(s)	657
SacI	GAGCTC	1 cut(s)	531
SapI	GCTCTTC	1 cut(s)	519
SaqAI	TTAA	4 cut(s)	257, 311, 401, 441
SatI	GCNGC	6 cut(s)	411, 462, 726, 762, 765, 768
Sau3AI	GATC	3 cut(s)	148, 274, 640
Sau96I	GGNCC	2 cut(s)	163, 334
SchI	GAGTC	1 cut(s)	527
ScrFI	CCNGG	1 cut(s)	76
SduI	GDGCHC	1 cut(s)	531
SfaNI	GCATC	5 cut(s)	3, 385, 421, 583, 669
SfcI	CTRYAG	1 cut(s)	765
SinI	GGWCC	2 cut(s)	163, 334
SmiMI	CAYNNNNRTG	1 cut(s)	657
SmlI	CTYRAG	1 cut(s)	220
SmoI	CTYRAG	1 cut(s)	220
Sse9I	AATT	3 cut(s)	19, 51, 193
SspMI	CTAG	3 cut(s)	180, 210, 699
SstI	GAGCTC	1 cut(s)	531
StyD4I	CCNGG	1 cut(s)	74
TaaI	ACNGT	4 cut(s)	480, 608, 637, 718
TaiI	ACGT	1 cut(s)	677
TaqI	TCGA	2 cut(s)	531, 657
TasI	AATT	3 cut(s)	19, 51, 193
TfiI	GAWTC	2 cut(s)	112, 752
Tru1I	TTAA	4 cut(s)	257, 311, 401, 441
Tru9I	TTAA	4 cut(s)	257, 311, 401, 441
TscAI	CASTG	6 cut(s)	433, 485, 613, 640, 721, 778
TseI	GCWGC	6 cut(s)	410, 461, 725, 761, 764, 767
TspDTI	ATGAA	5 cut(s)	356, 386, 543, 599, 762
TspRI	CASTG	6 cut(s)	433, 485, 613, 640, 721, 778
VpaK11BI	GGWCC	2 cut(s)	163, 334
VspI	ATTAAT	1 cut(s)	401
XapI	RAATTY	1 cut(s)	19
XmiI	GTMKAC	1 cut(s)	603
XspI	CTAG	3 cut(s)	180, 210, 699
Zsp2I	ATGCAT	1 cut(s)	400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.