Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0004445

Physical Location & Seq

Genomic Coordinates Forward (+)

58433175 .. 58437323

Gene Structure 4149 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0456900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2001 bp

ATGGGAAGTTCATCAGTAGTAGGTTGGACTCTTCTTTATGCTATCTTGGCTCTTATCACAACCCAACAGCACTACTCAAATGCTGCCTTGTTGCCGGAGACACTCAAGTTGATCGAAGCGGCCAACGCCGATGGACCTTATTTAGGGTTGGTCATTCCAAACACTTACGAATTGAACCCTCTTCTTCGATCTCCAAACTTCACCTCAACTGACTTGATCATTGACTTTTCTGGAAGAAGATTCAGGTTTGGAACCATTGCTACAAAGAAAGTCATATTGGTTATGACAGGACTGGGAATGATTAATGCAGGAATAACCACTCAGCTTTTACTAAGCATGTTCAGTGTAGAAGGAGTGGTGCATTATGGCACAGCTGGCAATGCGAATCCAACCTTCAACCTTGCAGATGTGGTCATTCCTCAGTATTGGTCCCATACTGCTCTTTGGACCTGGCAAAGATATGGACATGGGCCTGAAGATGATTTGCCTCTAAATTCGATGAGAGATATTGGGTGCTTGAACCTTGCAAGTTACACAGTGAATGTGACAGATGGGAGCTCATATGATAACTTGTTGAACAATATTTGGTATCAGTCAGAGGAAGTCTTCCCCATTGATGGAACTCCAGAACAAAGAGATTTTACCTTTTGGGTCCCTGTTCATCCCTTCTACTATGAAATCTCCAAAAATCTAGAGGACCTGAAACTAGAAGGTTGCCTAAACTCAACATCATGTTTGTCACATACACCAAAAGTAGCAAGAGTCCAAAGGGGAACAAGTGCAAGCATTTACCTGGACAATGCTGCTTACCGTGACTTCATATATGATAAGTTCAACGTAACTCCGGTGGACATGGAAAGTGCTTCTGTTGCTTTGATATGCCTTCAGCAAAGGGTGCCCTTCATAGCGATCAGGGCTCTCTCTGACTTGGCCGGCGGTGGCTCTGCGGATTCCAATGAGGCTGACACATTCAATACTCTCGCTTCCCATAATTCAGCCACAGTTGTTGTTGAATTTATCAAACAGTTATCAGCTGCTAGTTGTGCATCTATTATAAAAAAAATGAGAATTTCAGTTGTAGCTTGGCCTTGCATAGCTGTTTACGCTGTGATCATCAGCTTGATGCTTAAACACACAAATGATGCATTGTCTACAGATACACAGAAGTTGATCGACCAGGCCAACAAGAGTGGCCCTTACTTGGGCTTGGTAATTCTGAATTCTTTCGAACTGGACCCTCTTCTTCAATCTCCAAACTTCACTTCAACAAACTTGATCATAGATTTTTCCGGAATAACTACTCAGCTTTTGTTTAGCTTGTTTGATATAAAAGGAGTGGTTCACTACGGCATATCTGGCAATGCAAACCCATCCTTTAACATTGCAGATGTGCTCAATCCTCAAGATATGGAAACGGGTCTCAAGATGAACTACTCCTTGAATCACAAGGAGACTACACGAGAAATTGGCTACTTCAAATTTTCAAATTATACAGTGAATGTGACAGGTGGCAGCTCATTTGATAATCTCTTAAACAACATTTGGTATCAACCTGAAGAAGTCTTCCCTATTGATGGAACTCCAGAACAAAGACAGCATGCCTTCTGGGTTGCTGTTGATCCCTTCTACTATGAAATCTCCAAAAAGCTTGAGGATTTGAAGCTTGAGAGTTGCCTAAACTCAACAACATGTTTGCCCCATACCCCAAAGGTGGCTTTAGTCGAAAGGGGAACAAGTGCCAGCATTTTCCTGTCTAATGCTGCTTACCGTAGCTTCTTATATGACAAGTTCAACATAAGCCCTTTGGACATGGAAAGCGCTTCTGTTGCCTTGATATGTCTTCAGCAAAGGGTGCCTTTCATTGCAATCAGGGCTCTCTCTTCTGGTCTAACTGGTGGTGGCTCCGATGATCACACTGAAGCTGGCAAGTTCATTAGCCTTGCTTCGAAAAATTCAGTTACAGCTGTTGTGGAATTCATCAAACAGCTATCACTTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001101 GO:0002230 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003002 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0006810 GO:0006950 GO:0006952 GO:0006996 GO:0007010 GO:0007017 GO:0007275 GO:0007389 GO:0008150 GO:0009414 GO:0009415 GO:0009605 GO:0009607 GO:0009615 GO:0009628 GO:0009987 GO:0010035 GO:0010375 GO:0010496 GO:0010497 GO:0015630 GO:0016043 GO:0030865 GO:0031122 GO:0031347 GO:0032101 GO:0032501 GO:0032502 GO:0032879 GO:0032880 GO:0033043 GO:0042221 GO:0043207 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0043622 GO:0043900 GO:0044424 GO:0044464 GO:0048519 GO:0048583 GO:0048856 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050896 GO:0051049 GO:0051051 GO:0051128 GO:0051179 GO:0051223 GO:0051224 GO:0051234 GO:0051493 GO:0051607 GO:0051704 GO:0051707 GO:0065007 GO:0070201 GO:0071840 GO:0080134 GO:0090087 GO:0097159 GO:0097435 GO:0098542 GO:1901363 GO:1901700 GO:1904950

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

666

Amino Acids

73.41

Weight (kDa)

5.13

Isoelectric Point (pI)

35.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PNP_UDP_1	PF01048	49 - 341	1.3e-29	Phosphorylase superfamily
PNP_UDP_1	PF01048	432 - 661	4.9e-12	Phosphorylase superfamily

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004445)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G08120 AT5G08120
fragaria_vesca	FvH4_5g13401
malus_domestica	MD06G1205700.v1.1 MD14G1216600.v1.1
prunus_persica	Prupe.5G210000_v2.0.a1 Prupe.5G210000_v2.0.a1 Prupe.8G074000_v2.0.a1
pyrus_communis	pycom06g18350 pycom14g17940
rosa_chinensis	RchiOBHm_Chr4g0401411 RchiOBHm_Chr4g0419941 RchiOBHm_Chr7g0183731 RchiOBHm_Chr7g0231071
rosa_laevigata	RLG00000005028 RLG00000017072
rosa_multiflora	Rmu_co7992950.1_g000001 Rmu_sc0003610.1_g000029
rosa_roxburghii	Rroxscaffold_3G00270290
rosa_rugosa	Rorug06G0456900 Rorug06G0459600 Rorug07G0184000
rosa_samantha	Rh1AG064200 Rh4BG064900 Rh4BG101700 Rh4CG071700 Rh6AG168600 Rh7AG060500 Rh7BG060600 Rh7CG062200 Rh7DG060600
rosa_wichuraiana	Rw7G005020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1055
AccB1I	GGYRCC	2 cut(s)	895, 1852
AccI	GTMKAC	1 cut(s)	1151
AccIII	TCCGGA	1 cut(s)	1289
AciI	CCGC	3 cut(s)	119, 936, 947
AclWI	GGATC	1 cut(s)	1613
AcoI	YGGCCR	2 cut(s)	120, 930
AcsI	RAATTY	7 cut(s)	493, 1013, 1068, 1219, 1478, 1951, 1973
AcuI	CTGAAG	5 cut(s)	495, 869, 1575, 1826, 1938
AfeI	AGCGCT	1 cut(s)	1819
AfiI	CCNNNNNNNGG	6 cut(s)	143, 617, 1201, 1202, 1574, 1711
AflIII	ACRYGT	1 cut(s)	1688
AjnI	CCWGG	3 cut(s)	449, 792, 1176
AjuI	GAANNNNNNNTTGG	4 cut(s)	260, 292, 1246, 1278
Alw21I	GWGCWC	2 cut(s)	560, 1395
Alw26I	GTCTC	3 cut(s)	92, 1424, 1445
AlwI	GGATC	1 cut(s)	1613
Aor13HI	TCCGGA	1 cut(s)	1289
Aor51HI	AGCGCT	1 cut(s)	1819
AoxI	GGCC	6 cut(s)	120, 470, 930, 1085, 1179, 1192
ApeKI	GCWGC	5 cut(s)	83, 803, 1034, 1512, 1760
ApoI	RAATTY	7 cut(s)	493, 1013, 1068, 1219, 1478, 1951, 1973
AseI	ATTAAT	1 cut(s)	303
Asp700I	GAANNNNTTC	1 cut(s)	1223
AspLEI	GCGC	1 cut(s)	1820
AspS9I	GGNCC	8 cut(s)	134, 429, 447, 470, 652, 697, 1193, 1234
AsuHPI	GGTGA	1 cut(s)	193
AsuII	TTCGAA	2 cut(s)	1227, 1946
AvaII	GGWCC	6 cut(s)	134, 429, 447, 652, 697, 1234
BaeGI	GKGCMC	1 cut(s)	900
BanI	GGYRCC	2 cut(s)	895, 1852
BanII	GRGCYC	3 cut(s)	560, 919, 1876
BauI	CACGAG	1 cut(s)	1458
BbsI	GAAGAC	3 cut(s)	598, 1555, 1832
Bbv12I	GWGCWC	2 cut(s)	560, 1395
BbvI	GCAGC	5 cut(s)	70, 790, 1021, 1524, 1747
BccI	CCATC	5 cut(s)	125, 545, 611, 1378, 1568
BceAI	ACGGC	1 cut(s)	1363
BciT130I	CCWGG	3 cut(s)	451, 794, 1178
BclI	TGATCA	4 cut(s)	216, 1110, 1275, 1909
BcoDI	GTCTC	3 cut(s)	92, 1424, 1445
BfaI	CTAG	3 cut(s)	692, 707, 1038
BfmI	CTRYAG	1 cut(s)	1152
BfoI	RGCGCY	1 cut(s)	1821
BisI	GCNGC	6 cut(s)	84, 120, 804, 1035, 1513, 1761
BlsI	GCNGC	6 cut(s)	85, 121, 805, 1036, 1514, 1762
Bme1390I	CCNGG	3 cut(s)	451, 794, 1178
Bme18I	GGWCC	6 cut(s)	134, 429, 447, 652, 697, 1234
BmgT120I	GGNCC	8 cut(s)	134, 429, 447, 470, 652, 697, 1193, 1234
BmiI	GGNNCC	8 cut(s)	253, 431, 653, 654, 897, 1236, 1854, 1903
BmrFI	CCNGG	3 cut(s)	451, 794, 1178
BmrI	ACTGGG	1 cut(s)	302
BmsI	GCATC	3 cut(s)	1055, 1113, 1132
BmuI	ACTGGG	1 cut(s)	302
BpiI	GAAGAC	3 cut(s)	598, 1555, 1832
BpmI	CTGGAG	2 cut(s)	609, 1566
Bpu14I	TTCGAA	2 cut(s)	1227, 1946
BpuEI	CTTGAG	5 cut(s)	89, 1386, 1406, 1670, 1685
BsaI	GGTCTC	1 cut(s)	1424
BsaWI	WCCGGW	2 cut(s)	844, 1289
Bsc4I	CCNNNNNNNGG	6 cut(s)	143, 617, 1201, 1202, 1574, 1711
Bse118I	RCCGGY	1 cut(s)	932
Bse1I	ACTGG	3 cut(s)	297, 1236, 1897
Bse3DI	GCAATG	5 cut(s)	255, 385, 1366, 1380, 1860
BseAI	TCCGGA	1 cut(s)	1289
BseBI	CCWGG	3 cut(s)	451, 794, 1178
BseGI	GGATG	2 cut(s)	661, 1370
BseLI	CCNNNNNNNGG	6 cut(s)	143, 617, 1201, 1202, 1574, 1711
BseMI	GCAATG	5 cut(s)	255, 385, 1366, 1380, 1860
BseMII	CTCAG	3 cut(s)	335, 434, 1316
BseNI	ACTGG	3 cut(s)	297, 1236, 1897
BseSI	GKGCMC	1 cut(s)	900
BseXI	GCAGC	5 cut(s)	70, 790, 1021, 1524, 1747
BshFI	GGCC	6 cut(s)	122, 472, 932, 1087, 1181, 1194
BshNI	GGYRCC	2 cut(s)	895, 1852
BsiHKAI	GWGCWC	2 cut(s)	560, 1395
BsiSI	CCGG	4 cut(s)	95, 845, 933, 1290
BslFI	GGGAC	2 cut(s)	415, 638
BslI	CCNNNNNNNGG	6 cut(s)	143, 617, 1201, 1202, 1574, 1711
BsmAI	GTCTC	3 cut(s)	92, 1424, 1445
BsmFI	GGGAC	2 cut(s)	415, 638
BsnI	GGCC	6 cut(s)	122, 472, 932, 1087, 1181, 1194
Bso31I	GGTCTC	1 cut(s)	1424
Bsp119I	TTCGAA	2 cut(s)	1227, 1946
Bsp1286I	GDGCHC	5 cut(s)	560, 900, 919, 1395, 1876
Bsp13I	TCCGGA	1 cut(s)	1289
Bsp143I	GATC	9 cut(s)	111, 188, 216, 909, 1110, 1170, 1275, 1618, 1909
BspACI	CCGC	3 cut(s)	119, 936, 947
BspANI	GGCC	6 cut(s)	122, 472, 932, 1087, 1181, 1194
BspCNI	CTCAG	3 cut(s)	334, 433, 1315
BspEI	TCCGGA	1 cut(s)	1289
BspLI	GGNNCC	8 cut(s)	253, 431, 653, 654, 897, 1236, 1854, 1903
BspPI	GGATC	1 cut(s)	1613
BspT104I	TTCGAA	2 cut(s)	1227, 1946
BspT107I	GGYRCC	2 cut(s)	895, 1852
BspTNI	GGTCTC	1 cut(s)	1424
BsrDI	GCAATG	5 cut(s)	255, 385, 1366, 1380, 1860
BsrFI	RCCGGY	1 cut(s)	932
BsrI	ACTGG	3 cut(s)	297, 1236, 1897
BssAI	RCCGGY	1 cut(s)	932
BssMI	GATC	9 cut(s)	111, 188, 216, 909, 1110, 1170, 1275, 1618, 1909
BssSI	CACGAG	1 cut(s)	1458
Bst2BI	CACGAG	1 cut(s)	1458
Bst2UI	CCWGG	3 cut(s)	451, 794, 1178
Bst4CI	ACNGT	6 cut(s)	538, 812, 1003, 1026, 1495, 1769
Bst6I	CTCTTC	4 cut(s)	36, 186, 1245, 1885
BstAPI	GCANNNNNTGC	2 cut(s)	895, 1852
BstBI	TTCGAA	2 cut(s)	1227, 1946
BstC8I	GCNNGC	6 cut(s)	376, 784, 934, 1599, 1741, 1924
BstDEI	CTNAG	4 cut(s)	321, 332, 420, 1302
BstENI	CCTNNNNNAGG	1 cut(s)	141
BstF5I	GGATG	2 cut(s)	661, 1370
BstH2I	RGCGCY	1 cut(s)	1821
BstHHI	GCGC	1 cut(s)	1820
BstKTI	GATC	9 cut(s)	114, 191, 219, 912, 1113, 1173, 1278, 1621, 1912
BstMAI	GTCTC	3 cut(s)	92, 1424, 1445
BstMBI	GATC	9 cut(s)	111, 188, 216, 909, 1110, 1170, 1275, 1618, 1909
BstNI	CCWGG	3 cut(s)	451, 794, 1178
BstNSI	RCATGY	3 cut(s)	340, 1601, 1692
BstSCI	CCNGG	3 cut(s)	449, 792, 1176
BstSFI	CTRYAG	1 cut(s)	1152
BstSLI	GKGCMC	1 cut(s)	900
BstV1I	GCAGC	5 cut(s)	70, 790, 1021, 1524, 1747
BstV2I	GAAGAC	3 cut(s)	598, 1555, 1832
BsuRI	GGCC	6 cut(s)	122, 472, 932, 1087, 1181, 1194
BtsCI	GGATG	2 cut(s)	661, 1370
BtsIMutI	CAGTG	4 cut(s)	349, 543, 1500, 1914
Cac8I	GCNNGC	6 cut(s)	376, 784, 934, 1599, 1741, 1924
CfoI	GCGC	1 cut(s)	1820
Cfr10I	RCCGGY	1 cut(s)	932
Cfr13I	GGNCC	8 cut(s)	134, 429, 447, 470, 652, 697, 1193, 1234
CspCI	CAANNNNNGTGG	4 cut(s)	988, 1023, 1171, 1206
CviAII	CATG	7 cut(s)	337, 467, 732, 853, 1598, 1689, 1810
DdeI	CTNAG	4 cut(s)	321, 332, 420, 1302
DpnI	GATC	9 cut(s)	113, 190, 218, 911, 1112, 1172, 1277, 1620, 1911
DpnII	GATC	9 cut(s)	111, 188, 216, 909, 1110, 1170, 1275, 1618, 1909
EaeI	YGGCCR	2 cut(s)	120, 930
Eam1104I	CTCTTC	4 cut(s)	36, 186, 1245, 1885
EarI	CTCTTC	4 cut(s)	36, 186, 1245, 1885
Ecl136II	GAGCTC	1 cut(s)	558
Eco24I	GRGCYC	3 cut(s)	560, 919, 1876
Eco31I	GGTCTC	1 cut(s)	1424
Eco47I	GGWCC	6 cut(s)	134, 429, 447, 652, 697, 1234
Eco47III	AGCGCT	1 cut(s)	1819
Eco53kI	GAGCTC	1 cut(s)	558
Eco57I	CTGAAG	5 cut(s)	495, 869, 1575, 1826, 1938
EcoICRI	GAGCTC	1 cut(s)	558
EcoNI	CCTNNNNNAGG	1 cut(s)	141
EcoO109I	RGGNCCY	2 cut(s)	652, 697
EcoRI	GAATTC	2 cut(s)	1219, 1973
EcoRII	CCWGG	3 cut(s)	449, 792, 1176
EcoT22I	ATGCAT	1 cut(s)	1147
EcoT38I	GRGCYC	3 cut(s)	560, 919, 1876
FaeI	CATG	7 cut(s)	340, 470, 735, 856, 1601, 1692, 1813
FalI	AAGNNNNNCTT	2 cut(s)	1840, 1872
FaqI	GGGAC	2 cut(s)	415, 638
FatI	CATG	7 cut(s)	336, 466, 731, 852, 1597, 1688, 1809
FauNDI	CATATG	1 cut(s)	562
FbaI	TGATCA	4 cut(s)	216, 1110, 1275, 1909
FblI	GTMKAC	1 cut(s)	1151
Fnu4HI	GCNGC	6 cut(s)	84, 120, 804, 1035, 1513, 1761
FokI	GGATG	2 cut(s)	648, 1357
FriOI	GRGCYC	3 cut(s)	560, 919, 1876
Fsp4HI	GCNGC	6 cut(s)	84, 120, 804, 1035, 1513, 1761
FspBI	CTAG	3 cut(s)	692, 707, 1038
GlaI	GCGC	1 cut(s)	1819
GluI	GCNGC	6 cut(s)	84, 120, 804, 1035, 1513, 1761
GsuI	CTGGAG	2 cut(s)	609, 1566
HaeII	RGCGCY	1 cut(s)	1821
HaeIII	GGCC	6 cut(s)	122, 472, 932, 1087, 1181, 1194
HapII	CCGG	4 cut(s)	95, 845, 933, 1290
HhaI	GCGC	1 cut(s)	1820
Hin1II	CATG	7 cut(s)	340, 470, 735, 856, 1601, 1692, 1813
Hin6I	GCGC	1 cut(s)	1818
HinP1I	GCGC	1 cut(s)	1818
HindIII	AAGCTT	2 cut(s)	1646, 1661
HinfI	GANTC	6 cut(s)	28, 240, 385, 762, 950, 1441
HpaII	CCGG	4 cut(s)	95, 845, 933, 1290
HphI	GGTGA	1 cut(s)	193
Hpy166II	GTNNAC	4 cut(s)	850, 1102, 1152, 1342
Hpy188I	TCNGA	4 cut(s)	598, 925, 1218, 1906
Hpy188III	TCNNGA	7 cut(s)	231, 626, 692, 1290, 1403, 1423, 1583
Hpy8I	GTNNAC	4 cut(s)	850, 1102, 1152, 1342
HpyAV	CCTTC	8 cut(s)	344, 403, 676, 704, 893, 910, 1612, 1633
HpyCH4III	ACNGT	6 cut(s)	538, 812, 1003, 1026, 1495, 1769
HpyCH4IV	ACGT	1 cut(s)	837
HpyF3I	CTNAG	4 cut(s)	321, 332, 420, 1302
HpySE526I	ACGT	1 cut(s)	837
Hsp92II	CATG	7 cut(s)	340, 470, 735, 856, 1601, 1692, 1813
HspAI	GCGC	1 cut(s)	1818
KflI	GGGWCCC	1 cut(s)	652
Kpn2I	TCCGGA	1 cut(s)	1289
KroI	GCCGGC	1 cut(s)	932
KroNI	GCCGGC	1 cut(s)	934
Ksp22I	TGATCA	4 cut(s)	216, 1110, 1275, 1909
Kzo9I	GATC	9 cut(s)	111, 188, 216, 909, 1110, 1170, 1275, 1618, 1909
LmnI	GCTCC	2 cut(s)	555, 1907
Lsp1109I	GCAGC	5 cut(s)	70, 790, 1021, 1524, 1747
LweI	GCATC	3 cut(s)	1055, 1113, 1132
MaeI	CTAG	3 cut(s)	692, 707, 1038
MaeII	ACGT	1 cut(s)	837
MaeIII	GTNAC	7 cut(s)	530, 544, 738, 812, 838, 1501, 1957
MalI	GATC	9 cut(s)	113, 190, 218, 911, 1112, 1172, 1277, 1620, 1911
MboI	GATC	9 cut(s)	111, 188, 216, 909, 1110, 1170, 1275, 1618, 1909
MhlI	GDGCHC	5 cut(s)	560, 900, 919, 1395, 1876
MlyI	GAGTC	2 cut(s)	22, 771
MmeI	TCCRAC	2 cut(s)	5, 413
Mph1103I	ATGCAT	1 cut(s)	1147
MroI	TCCGGA	1 cut(s)	1289
MroNI	GCCGGC	1 cut(s)	932
MroXI	GAANNNNTTC	1 cut(s)	1223
MseI	TTAA	4 cut(s)	303, 1128, 1377, 1532
MslI	CAYNNNNRTG	1 cut(s)	1137
MspA1I	CMGCKG	3 cut(s)	374, 1034, 1964
MspI	CCGG	4 cut(s)	95, 845, 933, 1290
MspR9I	CCNGG	3 cut(s)	451, 794, 1178
MvaI	CCWGG	3 cut(s)	451, 794, 1178
NaeI	GCCGGC	1 cut(s)	934
NdeI	CATATG	1 cut(s)	562
NdeII	GATC	9 cut(s)	111, 188, 216, 909, 1110, 1170, 1275, 1618, 1909
NgoMIV	GCCGGC	1 cut(s)	932
NlaIII	CATG	7 cut(s)	340, 470, 735, 856, 1601, 1692, 1813
NlaIV	GGNNCC	8 cut(s)	253, 431, 653, 654, 897, 1236, 1854, 1903
NmuCI	GTSAC	4 cut(s)	544, 738, 812, 1501
NsiI	ATGCAT	1 cut(s)	1147
NspI	RCATGY	3 cut(s)	340, 1601, 1692
NspV	TTCGAA	2 cut(s)	1227, 1946
PaeI	GCATGC	1 cut(s)	1601
PciI	ACATGT	1 cut(s)	1688
PdiI	GCCGGC	1 cut(s)	934
PdmI	GAANNNNTTC	1 cut(s)	1223
PfeI	GAWTC	4 cut(s)	240, 385, 950, 1441
PkrI	GCNGC	6 cut(s)	85, 121, 805, 1036, 1514, 1762
PleI	GAGTC	2 cut(s)	22, 770
PpsI	GAGTC	2 cut(s)	22, 770
PpuMI	RGGWCCY	2 cut(s)	652, 697
PscI	ACATGT	1 cut(s)	1688
PshBI	ATTAAT	1 cut(s)	303
PsiI	TTATAA	1 cut(s)	1055
Psp124BI	GAGCTC	1 cut(s)	560
Psp5II	RGGWCCY	2 cut(s)	652, 697
Psp6I	CCWGG	3 cut(s)	449, 792, 1176
PspGI	CCWGG	3 cut(s)	449, 792, 1176
PspN4I	GGNNCC	8 cut(s)	253, 431, 653, 654, 897, 1236, 1854, 1903
PspPI	GGNCC	8 cut(s)	134, 429, 447, 470, 652, 697, 1193, 1234
PspPPI	RGGWCCY	2 cut(s)	652, 697
PsrI	GAACNNNNNNTAC	2 cut(s)	244, 276
PvuII	CAGCTG	3 cut(s)	374, 1034, 1964
RseI	CAYNNNNRTG	1 cut(s)	1137
SacI	GAGCTC	1 cut(s)	560
SaqAI	TTAA	4 cut(s)	303, 1128, 1377, 1532
SatI	GCNGC	6 cut(s)	84, 120, 804, 1035, 1513, 1761
Sau3AI	GATC	9 cut(s)	111, 188, 216, 909, 1110, 1170, 1275, 1618, 1909
Sau96I	GGNCC	8 cut(s)	134, 429, 447, 470, 652, 697, 1193, 1234
SchI	GAGTC	2 cut(s)	22, 771
ScrFI	CCNGG	3 cut(s)	451, 794, 1178
SduI	GDGCHC	5 cut(s)	560, 900, 919, 1395, 1876
SfaNI	GCATC	3 cut(s)	1055, 1113, 1132
SfcI	CTRYAG	1 cut(s)	1152
SfuI	TTCGAA	2 cut(s)	1227, 1946
SinI	GGWCC	6 cut(s)	134, 429, 447, 652, 697, 1234
SmiMI	CAYNNNNRTG	1 cut(s)	1137
SmlI	CTYRAG	5 cut(s)	104, 1401, 1421, 1649, 1664
SmoI	CTYRAG	5 cut(s)	104, 1401, 1421, 1649, 1664
SphI	GCATGC	1 cut(s)	1601
SsiI	CCGC	3 cut(s)	119, 936, 947
SspI	AATATT	1 cut(s)	583
SspMI	CTAG	3 cut(s)	692, 707, 1038
SstI	GAGCTC	1 cut(s)	560
StyD4I	CCNGG	3 cut(s)	449, 792, 1176
TaaI	ACNGT	6 cut(s)	538, 812, 1003, 1026, 1495, 1769
TaiI	ACGT	1 cut(s)	840
TaqI	TCGA	7 cut(s)	114, 187, 497, 1173, 1227, 1722, 1946
TauI	GCSGC	1 cut(s)	122
TfiI	GAWTC	4 cut(s)	240, 385, 950, 1441
Tru1I	TTAA	4 cut(s)	303, 1128, 1377, 1532
Tru9I	TTAA	4 cut(s)	303, 1128, 1377, 1532
TscAI	CASTG	4 cut(s)	349, 543, 1500, 1921
TseFI	GTSAC	4 cut(s)	544, 738, 812, 1501
TseI	GCWGC	5 cut(s)	83, 803, 1034, 1512, 1760
Tsp45I	GTSAC	4 cut(s)	544, 738, 812, 1501
TspDTI	ATGAA	9 cut(s)	650, 690, 808, 892, 1442, 1647, 1849, 1921, 1966
TspRI	CASTG	4 cut(s)	349, 543, 1500, 1921
VpaK11BI	GGWCC	6 cut(s)	134, 429, 447, 652, 697, 1234
VspI	ATTAAT	1 cut(s)	303
XagI	CCTNNNNNAGG	1 cut(s)	141
XapI	RAATTY	7 cut(s)	493, 1013, 1068, 1219, 1478, 1951, 1973
XbaI	TCTAGA	1 cut(s)	691
XceI	RCATGY	3 cut(s)	340, 1601, 1692
XmiI	GTMKAC	1 cut(s)	1151
XmnI	GAANNNNTTC	1 cut(s)	1223
XspI	CTAG	3 cut(s)	692, 707, 1038
Zsp2I	ATGCAT	1 cut(s)	1147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.