Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0001121

Physical Location & Seq

Genomic Coordinates Reverse (-)

11657218 .. 11660047

Gene Structure 2830 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G083200.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 501 bp

ATGTCATCTTCAACCTTCAGCGGTGATGAAACGGCGCCGTTCTTCGGCTTCCTCGGCGCTGCTGCAGCCCTCGTCTTCTCCTGTATGGGAGCTGCCTATGGAACGGCAAAGAGTGGTGTTGGTGTGGCATCTATGGGGGTGATGAGGCCTGAGCTGGTGATGAAGTCCATTGTTCCTGTTGTTATGGCTGGAGTTTTGGGTATTTATGGCCTTATTATTGCTGTTATCATTAGTACTGGAATTAACCCTAAGGCCAAGTCATACTATCTTTTTGATGGTTATGCACATCTCTCTTCTGGTCTTGCTTGTGGTCTCGCTGGGCTCTCTGCTGGAATGGCAATTGGTATAGTTGGTGATGCTGGTGTAAGAGCTAATGCACAGCAGCCAAAACTCTTTGTTGGGATGATCCTCATTCTCATCTTTGCTGAAGCACTGGCCCTCTATGGCCTCATTGTCGGCATCATCTTGTCTTCCCGATCAGGCCAATCCAGAGCAGACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000220 GO:0003674 GO:0003824 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006810 GO:0006811 GO:0006812 GO:0006873 GO:0006885 GO:0007035 GO:0008150 GO:0008324 GO:0009987 GO:0015075 GO:0015077 GO:0015078 GO:0015318 GO:0015399 GO:0015405 GO:0015672 GO:0016020 GO:0016021 GO:0016462 GO:0016469 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019725 GO:0019829 GO:0022804 GO:0022853 GO:0022857 GO:0022890 GO:0030003 GO:0030004 GO:0030641 GO:0031090 GO:0031224 GO:0032991 GO:0033176 GO:0033177 GO:0033179 GO:0034220 GO:0036442 GO:0042592 GO:0042623 GO:0042625 GO:0042626 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043492 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0044769 GO:0045851 GO:0046961 GO:0048878 GO:0050801 GO:0051179 GO:0051234 GO:0051452 GO:0051453 GO:0055067 GO:0055080 GO:0055082 GO:0055085 GO:0065007 GO:0065008 GO:0090662 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098796 GO:0098805 GO:0099131 GO:0099132 GO:1902600

KEGG Pathways

Metabolic & Signaling

ko00190 ko01100 ko04142 ko04145 ko04721 ko04966 ko05110 ko05120 ko05152 ko05323 map00190 map01100 map04142 map04145 map04721 map04966 map05110 map05120 map05152 map05323

Pfam Domains

Protein Families

ATP-synt_C

Protein Analysis

167

Amino Acids

16.75

Weight (kDa)

8.62

Isoelectric Point (pI)

37.33

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001121)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19910
fragaria_vesca	FvH4_1g12060 FvH4_2g39101
prunus_persica	Prupe.1G370100_v2.0.a1 Prupe.8G083200_v2.0.a1
pyrus_communis	pycom08g13990
rosa_chinensis	RchiOBHm_Chr0c44g0503601 RchiOBHm_Chr2g0099681 RchiOBHm_Chr2g0148411 RchiOBHm_Chr3g0479911 RchiOBHm_Chr4g0386081 RchiOBHm_Chr4g0414591 RchiOBHm_Chr4g0441791 RchiOBHm_Chr5g0032691 RchiOBHm_Chr5g0056041 RchiOBHm_Chr6g0273741
rosa_laevigata	RLG00000011186 RLG00000016905
rosa_multiflora	Rmu_sc0000429.1_g000094 Rmu_sc0000847.1_g000011 Rmu_sc0006458.1_g000002
rosa_roxburghii	Rroxscaffold_2G00142840 Rroxscaffold_6G00413310 Rroxscaffold_7G00172030
rosa_rugosa	Rorug02G0081900 Rorug02G0082000 Rorug02G0158600.1
rosa_samantha	Rh2AG131600 Rh2AG199500 Rh2BG134900 Rh2BG478700 Rh2CG135800 Rh2DG136300 Rh2DG487500 Rh3AG070500 Rh3AG230500 Rh3BG073100 Rh3CG071600 Rh4AG387600 Rh4CG011300 Rh4CG011900 Rh4CG012300 Rh4CG012700 Rh5BG410400 Rh5CG435500 Rh6AG160100 Rh6BG164100 Rh6BG196400 Rh6CG143400 Rh6CG154100 Rh6CG195500 Rh6DG149900
rosa_wichuraiana	Rw0G023060 Rw1G006760 Rw2G010210 Rw4G010770 Rw5G003630 Rw5G022180

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	34
AciI	CCGC	1 cut(s)	21
AclWI	GGATC	1 cut(s)	400
AcuI	CTGAAG	1 cut(s)	447
AcyI	GRCGYC	1 cut(s)	35
AfaI	GTAC	1 cut(s)	235
AfiI	CCNNNNNNNGG	1 cut(s)	44
AgsI	TTSAA	1 cut(s)	12
AluBI	AGCT	3 cut(s)	92, 154, 371
AluI	AGCT	3 cut(s)	92, 154, 371
Alw26I	GTCTC	1 cut(s)	317
AlwI	GGATC	1 cut(s)	400
AoxI	GGCC	6 cut(s)	146, 208, 252, 435, 445, 481
ApeKI	GCWGC	5 cut(s)	59, 62, 65, 92, 382
AspLEI	GCGC	2 cut(s)	37, 59
AspS9I	GGNCC	1 cut(s)	436
AsuHPI	GGTGA	4 cut(s)	35, 151, 169, 365
AxyI	CCTNAGG	1 cut(s)	249
BanI	GGYRCC	1 cut(s)	34
BanII	GRGCYC	1 cut(s)	324
BbsI	GAAGAC	2 cut(s)	67, 462
BbvI	GCAGC	5 cut(s)	46, 49, 77, 79, 394
BccI	CCATC	1 cut(s)	269
BceAI	ACGGC	3 cut(s)	22, 48, 120
BcoDI	GTCTC	1 cut(s)	317
BfmI	CTRYAG	1 cut(s)	63
BfoI	RGCGCY	2 cut(s)	38, 60
BisI	GCNGC	5 cut(s)	60, 63, 66, 93, 383
BlsI	GCNGC	5 cut(s)	61, 64, 67, 94, 384
BmcAI	AGTACT	1 cut(s)	235
BmgT120I	GGNCC	1 cut(s)	436
BmiI	GGNNCC	1 cut(s)	36
BmsI	GCATC	3 cut(s)	137, 346, 468
BpiI	GAAGAC	2 cut(s)	67, 462
BpmI	CTGGAG	1 cut(s)	210
Bpu10I	CCTNAGC	1 cut(s)	150
BsaHI	GRCGYC	1 cut(s)	35
BsaI	GGTCTC	1 cut(s)	317
BsaJI	CCNNGG	1 cut(s)	52
Bsc4I	CCNNNNNNNGG	1 cut(s)	44
Bse1I	ACTGG	2 cut(s)	241, 438
Bse21I	CCTNAGG	1 cut(s)	249
BseDI	CCNNGG	1 cut(s)	52
BseGI	GGATG	1 cut(s)	408
BseLI	CCNNNNNNNGG	1 cut(s)	44
BseMII	CTCAG	1 cut(s)	141
BseNI	ACTGG	2 cut(s)	241, 438
BseXI	GCAGC	5 cut(s)	46, 49, 77, 79, 394
BseYI	CCCAGC	1 cut(s)	317
BshFI	GGCC	6 cut(s)	148, 210, 254, 437, 447, 483
BshNI	GGYRCC	1 cut(s)	34
BslI	CCNNNNNNNGG	1 cut(s)	44
BsmAI	GTCTC	1 cut(s)	317
BsnI	GGCC	6 cut(s)	148, 210, 254, 437, 447, 483
Bso31I	GGTCTC	1 cut(s)	317
Bsp1286I	GDGCHC	1 cut(s)	324
Bsp143I	GATC	2 cut(s)	405, 476
BspACI	CCGC	1 cut(s)	21
BspANI	GGCC	6 cut(s)	148, 210, 254, 437, 447, 483
BspCNI	CTCAG	1 cut(s)	142
BspLI	GGNNCC	1 cut(s)	36
BspMAI	CTGCAG	1 cut(s)	67
BspPI	GGATC	1 cut(s)	400
BspT107I	GGYRCC	1 cut(s)	34
BspTNI	GGTCTC	1 cut(s)	317
BsrI	ACTGG	2 cut(s)	241, 438
BssECI	CCNNGG	1 cut(s)	52
BssMI	GATC	2 cut(s)	405, 476
BssNI	GRCGYC	1 cut(s)	35
Bst6I	CTCTTC	1 cut(s)	298
BstACI	GRCGYC	1 cut(s)	35
BstDEI	CTNAG	2 cut(s)	150, 249
BstF5I	GGATG	1 cut(s)	408
BstH2I	RGCGCY	2 cut(s)	38, 60
BstHHI	GCGC	2 cut(s)	37, 59
BstKTI	GATC	2 cut(s)	408, 479
BstMAI	GTCTC	1 cut(s)	317
BstMBI	GATC	2 cut(s)	405, 476
BstMWI	GCNNNNNNNGC	3 cut(s)	54, 65, 335
BstSFI	CTRYAG	1 cut(s)	63
BstV1I	GCAGC	5 cut(s)	46, 49, 77, 79, 394
BstV2I	GAAGAC	2 cut(s)	67, 462
Bsu36I	CCTNAGG	1 cut(s)	249
BsuRI	GGCC	6 cut(s)	148, 210, 254, 437, 447, 483
BtsCI	GGATG	1 cut(s)	408
BtsIMutI	CAGTG	1 cut(s)	431
CfoI	GCGC	2 cut(s)	37, 59
Cfr13I	GGNCC	1 cut(s)	436
Csp6I	GTAC	1 cut(s)	234
CviQI	GTAC	1 cut(s)	234
DdeI	CTNAG	2 cut(s)	150, 249
DinI	GGCGCC	1 cut(s)	36
DpnI	GATC	2 cut(s)	407, 478
DpnII	GATC	2 cut(s)	405, 476
Eam1104I	CTCTTC	1 cut(s)	298
EarI	CTCTTC	1 cut(s)	298
Eco147I	AGGCCT	1 cut(s)	148
Eco24I	GRGCYC	1 cut(s)	324
Eco31I	GGTCTC	1 cut(s)	317
Eco57I	CTGAAG	1 cut(s)	447
Eco81I	CCTNAGG	1 cut(s)	249
EcoT38I	GRGCYC	1 cut(s)	324
EgeI	GGCGCC	1 cut(s)	36
EheI	GGCGCC	1 cut(s)	36
FaiI	YATR	9 cut(s)	86, 99, 134, 185, 207, 262, 282, 347, 444
Fnu4HI	GCNGC	5 cut(s)	60, 63, 66, 93, 383
FokI	GGATG	1 cut(s)	415
FriOI	GRGCYC	1 cut(s)	324
Fsp4HI	GCNGC	5 cut(s)	60, 63, 66, 93, 383
GlaI	GCGC	2 cut(s)	36, 58
GluI	GCNGC	5 cut(s)	60, 63, 66, 93, 383
GsaI	CCCAGC	1 cut(s)	321
GsuI	CTGGAG	1 cut(s)	210
HaeII	RGCGCY	2 cut(s)	38, 60
HaeIII	GGCC	6 cut(s)	148, 210, 254, 437, 447, 483
HhaI	GCGC	2 cut(s)	37, 59
Hin1I	GRCGYC	1 cut(s)	35
Hin6I	GCGC	2 cut(s)	35, 57
HinP1I	GCGC	2 cut(s)	35, 57
HphI	GGTGA	4 cut(s)	35, 151, 169, 365
Hpy188III	TCNNGA	2 cut(s)	474, 489
HpyAV	CCTTC	1 cut(s)	25
HpyCH4V	TGCA	3 cut(s)	65, 284, 377
HpyF10VI	GCNNNNNNNGC	3 cut(s)	54, 65, 335
HpyF3I	CTNAG	2 cut(s)	150, 249
Hsp92I	GRCGYC	1 cut(s)	35
HspAI	GCGC	2 cut(s)	35, 57
KasI	GGCGCC	1 cut(s)	34
Kzo9I	GATC	2 cut(s)	405, 476
LmnI	GCTCC	1 cut(s)	89
Lsp1109I	GCAGC	5 cut(s)	46, 49, 77, 79, 394
LweI	GCATC	3 cut(s)	137, 346, 468
MalI	GATC	2 cut(s)	407, 478
MboI	GATC	2 cut(s)	405, 476
MboII	GAAGA	4 cut(s)	34, 67, 285, 462
MfeI	CAATTG	1 cut(s)	339
MhlI	GDGCHC	1 cut(s)	324
MluCI	AATT	2 cut(s)	240, 339
Mly113I	GGCGCC	1 cut(s)	35
MnlI	CCTC	6 cut(s)	62, 80, 138, 419, 449, 458
MseI	TTAA	1 cut(s)	243
MspA1I	CMGCKG	1 cut(s)	21
MunI	CAATTG	1 cut(s)	339
MwoI	GCNNNNNNNGC	3 cut(s)	54, 65, 335
NarI	GGCGCC	1 cut(s)	35
NdeII	GATC	2 cut(s)	405, 476
NlaIV	GGNNCC	1 cut(s)	36
NmeAIII	GCCGAG	1 cut(s)	33
PceI	AGGCCT	1 cut(s)	148
PkrI	GCNGC	5 cut(s)	61, 64, 67, 94, 384
PluTI	GGCGCC	1 cut(s)	38
PspFI	CCCAGC	1 cut(s)	317
PspN4I	GGNNCC	1 cut(s)	36
PspPI	GGNCC	1 cut(s)	436
PstI	CTGCAG	1 cut(s)	67
RsaI	GTAC	1 cut(s)	235
RsaNI	GTAC	1 cut(s)	234
SaqAI	TTAA	1 cut(s)	243
SatI	GCNGC	5 cut(s)	60, 63, 66, 93, 383
Sau3AI	GATC	2 cut(s)	405, 476
Sau96I	GGNCC	1 cut(s)	436
ScaI	AGTACT	1 cut(s)	235
SduI	GDGCHC	1 cut(s)	324
SetI	ASST	4 cut(s)	17, 94, 156, 373
SfaNI	GCATC	3 cut(s)	137, 346, 468
SfcI	CTRYAG	1 cut(s)	63
SfoI	GGCGCC	1 cut(s)	36
Sse9I	AATT	2 cut(s)	240, 339
SseBI	AGGCCT	1 cut(s)	148
SsiI	CCGC	1 cut(s)	21
SspDI	GGCGCC	1 cut(s)	34
StuI	AGGCCT	1 cut(s)	148
TasI	AATT	2 cut(s)	240, 339
TatI	WGTACW	1 cut(s)	233
Tru1I	TTAA	1 cut(s)	243
Tru9I	TTAA	1 cut(s)	243
TscAI	CASTG	1 cut(s)	438
TseI	GCWGC	5 cut(s)	59, 62, 65, 92, 382
TspDTI	ATGAA	2 cut(s)	42, 176
TspRI	CASTG	1 cut(s)	438
ZrmI	AGTACT	1 cut(s)	235

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.