Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0002586

Physical Location & Seq

Genomic Coordinates Forward (+)

19834248 .. 19835849

Gene Structure 1602 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G216700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 771 bp

ATGGGAAAACTCACAGGATTTCTAATTTTTTCAGGCCTCTTCACAGGCCTAGTGGTTGCAGCAGATTGGAACATTTTGAAAAACCAGAAAAACAAGAACAATGGGGTAGGAGATGGCTTGAAGAAGTACTGTGAGAGTTGGAGGATCAATGTGGAAGTGAACAACATTAGAGGTTTTGATGTGGTGCCCCAAGAATGTGTCCAGTACATTCAGAAATACATGACATCCTCTCAGTACAAGGCTGATTCAGAGAAGGCCTTGGAGGAGGTCACTTTCTACTTGAGCAGCTGCTGCACATTGGAAGGTGATGGCAAAGATGCATGGATTTTTGATGTTGATGATACACTTCTCTCCACCATTCCTTACTTCAAGACACATGGTTTTGGGGGAGAGAAGATCAATGCAACTTCTATGGAGGCACGGATGAGAGAGAGTAAGGCACCAGCTCTTGGGCACACACTGAAGCTCTTCCATGAGATCAAAAACAGAGGACTTAAAATATTTTTAATCTCTTCAAGAAGGGAAAACCTTAGATCCTCAAGTGTGGACAATCTCATTAAGGTTGGATACCATGGATGGACTGGTCTTATATTAAGGGGTCTTGAAGATGAGTTCATGGAAGTGCAAAAATACAAGTCGAAGGCAAGGCACAGATTGGTTGATGAAGGCTACCTCATCTGGGGCATCATTGGAGATCAATGGAGCAGCTTTGAGGGCCTTCCAATTGCAAAAAGGACATTCAAATTACCCAATTCCATGTACTACAATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Acid_phosphat_B

Protein Analysis

257

Amino Acids

29.2

Weight (kDa)

8.72

Isoelectric Point (pI)

35.41

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002586)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04040 AT5G44020
fragaria_vesca	FvH4_2g20720
malus_domestica	MD00G1060800.v1.1
prunus_persica	Prupe.1G046900_v2.0.a1 Prupe.8G216700_v2.0.a1
pyrus_communis	pycom05g17430 pycom10g15320 pycom16g18830
rosa_chinensis	RchiOBHm_Chr4g0395031 RchiOBHm_Chr4g0395081 RchiOBHm_Chr4g0395141 RchiOBHm_Chr6g0286901
rosa_laevigata	RLG00000012528
rosa_multiflora	Rmu_sc0000734.1_g000001 Rmu_sc0001827.1_g000003 Rmu_sc0002520.1_g000008 Rmu_sc0007570.1_g000003 Rmu_sc0008415.1_g000002
rosa_roxburghii	Rroxscaffold_5G00340010 Rroxscaffold_5G00340020 Rroxscaffold_5G00340080 Rroxscaffold_7G00181820
rosa_rugosa	Rorug03G0359700.1 Rorug06G0184700
rosa_samantha	Rh4AG056700 Rh4BG055400 Rh4BG055600 Rh4CG061500 Rh4CG061600 Rh4CG061800 Rh6AG296600 Rh6BG301200 Rh6CG308600 Rh6CG308700 Rh6DG292400 Rh6DG292500
rosa_wichuraiana	Rw4G004550 Rw4G004570 Rw6G025590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	184, 439
AccB7I	CCANNNNNTGG	1 cut(s)	449
AclWI	GGATC	2 cut(s)	152, 528
AcuI	CTGAAG	1 cut(s)	482
AfaI	GTAC	4 cut(s)	128, 206, 236, 761
AfiI	CCNNNNNNNGG	2 cut(s)	449, 679
AgsI	TTSAA	6 cut(s)	79, 121, 370, 516, 605, 742
AluBI	AGCT	4 cut(s)	288, 446, 466, 708
AluI	AGCT	4 cut(s)	288, 446, 466, 708
AlwI	GGATC	2 cut(s)	152, 528
AlwNI	CAGNNNCTG	1 cut(s)	291
AoxI	GGCC	4 cut(s)	34, 46, 255, 715
ApeKI	GCWGC	5 cut(s)	59, 285, 288, 291, 705
Asp700I	GAANNNNTTC	1 cut(s)	467
AspS9I	GGNCC	1 cut(s)	715
AsuHPI	GGTGA	1 cut(s)	317
BaeGI	GKGCMC	2 cut(s)	189, 456
BanI	GGYRCC	2 cut(s)	184, 439
BbvI	GCAGC	5 cut(s)	71, 275, 278, 297, 717
BccI	CCATC	3 cut(s)	107, 302, 570
BciVI	GTATCC	1 cut(s)	560
BfaI	CTAG	1 cut(s)	50
BfuI	GTATCC	1 cut(s)	560
BisI	GCNGC	5 cut(s)	60, 286, 289, 292, 706
BlsI	GCNGC	5 cut(s)	61, 287, 290, 293, 707
BmcAI	AGTACT	1 cut(s)	128
BmgT120I	GGNCC	1 cut(s)	715
BmiI	GGNNCC	2 cut(s)	186, 441
BmsI	GCATC	2 cut(s)	307, 693
BpuEI	CTTGAG	2 cut(s)	301, 523
BsaJI	CCNNGG	2 cut(s)	258, 571
Bsc4I	CCNNNNNNNGG	2 cut(s)	449, 679
Bse1I	ACTGG	2 cut(s)	202, 586
BseDI	CCNNGG	2 cut(s)	258, 571
BseGI	GGATG	3 cut(s)	224, 429, 581
BseLI	CCNNNNNNNGG	2 cut(s)	449, 679
BseMII	CTCAG	1 cut(s)	245
BseNI	ACTGG	2 cut(s)	202, 586
BseRI	GAGGAG	1 cut(s)	278
BseSI	GKGCMC	2 cut(s)	189, 456
BseXI	GCAGC	5 cut(s)	71, 275, 278, 297, 717
BsgI	GTGCAG	1 cut(s)	277
BshFI	GGCC	4 cut(s)	36, 48, 257, 717
BshNI	GGYRCC	2 cut(s)	184, 439
BslI	CCNNNNNNNGG	2 cut(s)	449, 679
BsnI	GGCC	4 cut(s)	36, 48, 257, 717
Bsp1286I	GDGCHC	2 cut(s)	189, 456
Bsp143I	GATC	5 cut(s)	144, 396, 477, 533, 694
Bsp19I	CCATGG	1 cut(s)	571
BspANI	GGCC	4 cut(s)	36, 48, 257, 717
BspCNI	CTCAG	1 cut(s)	244
BspLI	GGNNCC	2 cut(s)	186, 441
BspPI	GGATC	2 cut(s)	152, 528
BspQI	GCTCTTC	1 cut(s)	473
BspT107I	GGYRCC	2 cut(s)	184, 439
BsrI	ACTGG	2 cut(s)	202, 586
BssECI	CCNNGG	2 cut(s)	258, 571
BssMI	GATC	5 cut(s)	144, 396, 477, 533, 694
BssT1I	CCWWGG	2 cut(s)	258, 571
Bst4CI	ACNGT	1 cut(s)	131
Bst6I	CTCTTC	3 cut(s)	44, 473, 517
BstAPI	GCANNNNNTGC	1 cut(s)	291
BstDEI	CTNAG	2 cut(s)	231, 530
BstDSI	CCRYGG	1 cut(s)	571
BstF5I	GGATG	3 cut(s)	224, 429, 581
BstKTI	GATC	5 cut(s)	147, 399, 480, 536, 697
BstMBI	GATC	5 cut(s)	144, 396, 477, 533, 694
BstMWI	GCNNNNNNNGC	2 cut(s)	291, 714
BstSLI	GKGCMC	2 cut(s)	189, 456
BstV1I	GCAGC	5 cut(s)	71, 275, 278, 297, 717
BstX2I	RGATCY	1 cut(s)	533
BstYI	RGATCY	1 cut(s)	533
BsuI	GTATCC	1 cut(s)	560
BsuRI	GGCC	4 cut(s)	36, 48, 257, 717
BtgI	CCRYGG	1 cut(s)	571
BtsCI	GGATG	3 cut(s)	224, 429, 581
BtsIMutI	CAGTG	1 cut(s)	458
CaiI	CAGNNNCTG	1 cut(s)	291
Cfr13I	GGNCC	1 cut(s)	715
Csp6I	GTAC	4 cut(s)	127, 205, 235, 760
CviAII	CATG	7 cut(s)	220, 321, 377, 473, 572, 616, 757
CviQI	GTAC	4 cut(s)	127, 205, 235, 760
DdeI	CTNAG	2 cut(s)	231, 530
DpnI	GATC	5 cut(s)	146, 398, 479, 535, 696
DpnII	GATC	5 cut(s)	144, 396, 477, 533, 694
Eam1104I	CTCTTC	3 cut(s)	44, 473, 517
EarI	CTCTTC	3 cut(s)	44, 473, 517
Eco130I	CCWWGG	2 cut(s)	258, 571
Eco147I	AGGCCT	3 cut(s)	36, 48, 257
Eco57I	CTGAAG	1 cut(s)	482
EcoO109I	RGGNCCY	1 cut(s)	715
EcoT14I	CCWWGG	2 cut(s)	258, 571
EcoT22I	ATGCAT	1 cut(s)	322
ErhI	CCWWGG	2 cut(s)	258, 571
FaeI	CATG	7 cut(s)	223, 324, 380, 476, 575, 619, 760
FaiI	YATR	9 cut(s)	221, 322, 378, 413, 474, 573, 590, 617, 758
FatI	CATG	7 cut(s)	219, 320, 376, 472, 571, 615, 756
Fnu4HI	GCNGC	5 cut(s)	60, 286, 289, 292, 706
FokI	GGATG	3 cut(s)	211, 436, 588
Fsp4HI	GCNGC	5 cut(s)	60, 286, 289, 292, 706
FspBI	CTAG	1 cut(s)	50
GluI	GCNGC	5 cut(s)	60, 286, 289, 292, 706
HaeIII	GGCC	4 cut(s)	36, 48, 257, 717
Hin1II	CATG	7 cut(s)	223, 324, 380, 476, 575, 619, 760
HinfI	GANTC	1 cut(s)	245
HphI	GGTGA	1 cut(s)	317
Hpy166II	GTNNAC	2 cut(s)	160, 547
Hpy188I	TCNGA	2 cut(s)	213, 250
Hpy188III	TCNNGA	3 cut(s)	370, 516, 602
Hpy8I	GTNNAC	2 cut(s)	160, 547
HpyAV	CCTTC	6 cut(s)	247, 296, 513, 634, 659, 728
HpyCH4III	ACNGT	1 cut(s)	131
HpyCH4V	TGCA	6 cut(s)	59, 294, 320, 404, 625, 728
HpyF10VI	GCNNNNNNNGC	2 cut(s)	291, 714
HpyF3I	CTNAG	2 cut(s)	231, 530
Hsp92II	CATG	7 cut(s)	223, 324, 380, 476, 575, 619, 760
Kzo9I	GATC	5 cut(s)	144, 396, 477, 533, 694
LguI	GCTCTTC	1 cut(s)	473
LmnI	GCTCC	1 cut(s)	702
LpnPI	CCDG	7 cut(s)	18, 30, 98, 215, 456, 567, 664
Lsp1109I	GCAGC	5 cut(s)	71, 275, 278, 297, 717
LweI	GCATC	2 cut(s)	307, 693
MaeI	CTAG	1 cut(s)	50
MaeIII	GTNAC	1 cut(s)	268
MalI	GATC	5 cut(s)	146, 398, 479, 535, 696
MboI	GATC	5 cut(s)	144, 396, 477, 533, 694
MboII	GAAGA	6 cut(s)	31, 133, 406, 460, 504, 617
MfeI	CAATTG	1 cut(s)	723
MflI	RGATCY	1 cut(s)	533
MhlI	GDGCHC	2 cut(s)	189, 456
MluCI	AATT	5 cut(s)	24, 723, 743, 751, 766
MmeI	TCCRAC	2 cut(s)	119, 544
Mph1103I	ATGCAT	1 cut(s)	322
MroXI	GAANNNNTTC	1 cut(s)	467
MseI	TTAA	4 cut(s)	495, 506, 558, 593
MslI	CAYNNNNRTG	1 cut(s)	620
MspA1I	CMGCKG	1 cut(s)	288
MunI	CAATTG	1 cut(s)	723
MwoI	GCNNNNNNNGC	2 cut(s)	291, 714
NcoI	CCATGG	1 cut(s)	571
NdeII	GATC	5 cut(s)	144, 396, 477, 533, 694
NlaIII	CATG	7 cut(s)	223, 324, 380, 476, 575, 619, 760
NlaIV	GGNNCC	2 cut(s)	186, 441
NmuCI	GTSAC	1 cut(s)	268
NsiI	ATGCAT	1 cut(s)	322
PceI	AGGCCT	3 cut(s)	36, 48, 257
PciSI	GCTCTTC	1 cut(s)	473
PdmI	GAANNNNTTC	1 cut(s)	467
PfeI	GAWTC	1 cut(s)	245
PflMI	CCANNNNNTGG	1 cut(s)	449
PkrI	GCNGC	5 cut(s)	61, 287, 290, 293, 707
PspN4I	GGNNCC	2 cut(s)	186, 441
PspPI	GGNCC	1 cut(s)	715
PstNI	CAGNNNCTG	1 cut(s)	291
PsuI	RGATCY	1 cut(s)	533
PvuII	CAGCTG	1 cut(s)	288
RsaI	GTAC	4 cut(s)	128, 206, 236, 761
RsaNI	GTAC	4 cut(s)	127, 205, 235, 760
RseI	CAYNNNNRTG	1 cut(s)	620
SapI	GCTCTTC	1 cut(s)	473
SaqAI	TTAA	4 cut(s)	495, 506, 558, 593
SatI	GCNGC	5 cut(s)	60, 286, 289, 292, 706
Sau3AI	GATC	5 cut(s)	144, 396, 477, 533, 694
Sau96I	GGNCC	1 cut(s)	715
ScaI	AGTACT	1 cut(s)	128
SduI	GDGCHC	2 cut(s)	189, 456
SfaNI	GCATC	2 cut(s)	307, 693
SmiMI	CAYNNNNRTG	1 cut(s)	620
SmlI	CTYRAG	2 cut(s)	280, 538
SmoI	CTYRAG	2 cut(s)	280, 538
Sse9I	AATT	5 cut(s)	24, 723, 743, 751, 766
SseBI	AGGCCT	3 cut(s)	36, 48, 257
SspI	AATATT	1 cut(s)	501
SspMI	CTAG	1 cut(s)	50
StuI	AGGCCT	3 cut(s)	36, 48, 257
StyI	CCWWGG	2 cut(s)	258, 571
TaaI	ACNGT	1 cut(s)	131
TaqI	TCGA	1 cut(s)	638
TasI	AATT	5 cut(s)	24, 723, 743, 751, 766
TatI	WGTACW	4 cut(s)	126, 204, 234, 759
TfiI	GAWTC	1 cut(s)	245
Tru1I	TTAA	4 cut(s)	495, 506, 558, 593
Tru9I	TTAA	4 cut(s)	495, 506, 558, 593
TscAI	CASTG	1 cut(s)	465
TseFI	GTSAC	1 cut(s)	268
TseI	GCWGC	5 cut(s)	59, 285, 288, 291, 705
Tsp45I	GTSAC	1 cut(s)	268
TspDTI	ATGAA	2 cut(s)	604, 678
TspGWI	ACGGA	1 cut(s)	436
TspRI	CASTG	1 cut(s)	465
Van91I	CCANNNNNTGG	1 cut(s)	449
XcmI	CCANNNNNNNNNTGG	1 cut(s)	578
XmnI	GAANNNNTTC	1 cut(s)	467
XspI	CTAG	1 cut(s)	50
ZrmI	AGTACT	1 cut(s)	128
Zsp2I	ATGCAT	1 cut(s)	322

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.