HAD superfamily, subfamily IIIB (Acid phosphatase)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04040 AT5G44020 |
| fragaria_vesca | FvH4_2g20720 |
| malus_domestica | MD00G1060800.v1.1 |
| prunus_persica | Prupe.1G046900_v2.0.a1 Prupe.8G216700_v2.0.a1 |
| pyrus_communis | pycom05g17430 pycom10g15320 pycom16g18830 |
| rosa_chinensis | RchiOBHm_Chr4g0395031 RchiOBHm_Chr4g0395081 RchiOBHm_Chr4g0395141 RchiOBHm_Chr6g0286901 |
| rosa_laevigata | RLG00000012528 |
| rosa_multiflora | Rmu_sc0000734.1_g000001 Rmu_sc0001827.1_g000003 Rmu_sc0002520.1_g000008 Rmu_sc0007570.1_g000003 Rmu_sc0008415.1_g000002 |
| rosa_roxburghii | Rroxscaffold_5G00340010 Rroxscaffold_5G00340020 Rroxscaffold_5G00340080 Rroxscaffold_7G00181820 |
| rosa_rugosa | Rorug03G0359700.1 Rorug06G0184700 |
| rosa_samantha | Rh4AG056700 Rh4BG055400 Rh4BG055600 Rh4CG061500 Rh4CG061600 Rh4CG061800 Rh6AG296600 Rh6BG301200 Rh6CG308600 Rh6CG308700 Rh6DG292400 Rh6DG292500 |
| rosa_wichuraiana | Rw4G004550 Rw4G004570 Rw6G025590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 368 |
| AccB1I | GGYRCC | 1 cut(s) | 544 |
| AciI | CCGC | 2 cut(s) | 72, 730 |
| AcsI | RAATTY | 1 cut(s) | 172 |
| AcuI | CTGAAG | 2 cut(s) | 25, 587 |
| AcyI | GRCGYC | 1 cut(s) | 365 |
| AfaI | GTAC | 4 cut(s) | 311, 347, 377, 821 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 183, 736 |
| AgsI | TTSAA | 6 cut(s) | 262, 287, 304, 475, 673, 799 |
| AluBI | AGCT | 4 cut(s) | 275, 502, 551, 571 |
| AluI | AGCT | 4 cut(s) | 275, 502, 551, 571 |
| Alw21I | GWGCWC | 1 cut(s) | 561 |
| Alw26I | GTCTC | 2 cut(s) | 288, 638 |
| AoxI | GGCC | 2 cut(s) | 395, 751 |
| ApeKI | GCWGC | 1 cut(s) | 236 |
| ApoI | RAATTY | 1 cut(s) | 172 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 572 |
| AspS9I | GGNCC | 1 cut(s) | 396 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 582, 615 |
| BanI | GGYRCC | 1 cut(s) | 544 |
| BauI | CACGAG | 1 cut(s) | 665 |
| BbsI | GAAGAC | 1 cut(s) | 360 |
| Bbv12I | GWGCWC | 1 cut(s) | 561 |
| BbvI | GCAGC | 1 cut(s) | 248 |
| BccI | CCATC | 2 cut(s) | 407, 618 |
| BciVI | GTATCC | 1 cut(s) | 608 |
| BcoDI | GTCTC | 2 cut(s) | 288, 638 |
| BfaI | CTAG | 1 cut(s) | 200 |
| BfuI | GTATCC | 1 cut(s) | 608 |
| BisI | GCNGC | 1 cut(s) | 237 |
| BlsI | GCNGC | 1 cut(s) | 238 |
| BmcAI | AGTACT | 1 cut(s) | 311 |
| BmgT120I | GGNCC | 1 cut(s) | 396 |
| BmiI | GGNNCC | 1 cut(s) | 546 |
| BmsI | GCATC | 2 cut(s) | 412, 750 |
| BpiI | GAAGAC | 1 cut(s) | 360 |
| BpuEI | CTTGAG | 1 cut(s) | 575 |
| Bsa29I | ATCGAT | 1 cut(s) | 717 |
| BsaHI | GRCGYC | 1 cut(s) | 365 |
| BsaI | GGTCTC | 1 cut(s) | 638 |
| BsaJI | CCNNGG | 4 cut(s) | 331, 399, 619, 780 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 512, 542 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 183, 736 |
| Bse1I | ACTGG | 3 cut(s) | 317, 634, 754 |
| BseCI | ATCGAT | 1 cut(s) | 717 |
| BseDI | CCNNGG | 4 cut(s) | 331, 399, 619, 780 |
| BseGI | GGATG | 3 cut(s) | 341, 427, 629 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 183, 736 |
| BseMII | CTCAG | 3 cut(s) | 234, 386, 687 |
| BseNI | ACTGG | 3 cut(s) | 317, 634, 754 |
| BseRI | GAGGAG | 1 cut(s) | 419 |
| BseXI | GCAGC | 1 cut(s) | 248 |
| BshFI | GGCC | 2 cut(s) | 397, 753 |
| BshNI | GGYRCC | 1 cut(s) | 544 |
| BshVI | ATCGAT | 1 cut(s) | 717 |
| BsiHKAI | GWGCWC | 1 cut(s) | 561 |
| BslFI | GGGAC | 2 cut(s) | 523, 786 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 183, 736 |
| BsmAI | GTCTC | 2 cut(s) | 288, 638 |
| BsmBI | CGTCTC | 1 cut(s) | 288 |
| BsmFI | GGGAC | 2 cut(s) | 523, 786 |
| BsnI | GGCC | 2 cut(s) | 397, 753 |
| Bso31I | GGTCTC | 1 cut(s) | 638 |
| Bsp1286I | GDGCHC | 1 cut(s) | 561 |
| Bsp143I | GATC | 3 cut(s) | 23, 582, 714 |
| Bsp19I | CCATGG | 2 cut(s) | 619, 780 |
| BspACI | CCGC | 2 cut(s) | 72, 730 |
| BspANI | GGCC | 2 cut(s) | 397, 753 |
| BspCNI | CTCAG | 3 cut(s) | 233, 385, 688 |
| BspDI | ATCGAT | 1 cut(s) | 717 |
| BspLI | GGNNCC | 1 cut(s) | 546 |
| BspQI | GCTCTTC | 1 cut(s) | 578 |
| BspT107I | GGYRCC | 1 cut(s) | 544 |
| BspTNI | GGTCTC | 1 cut(s) | 638 |
| BsrI | ACTGG | 3 cut(s) | 317, 634, 754 |
| BssECI | CCNNGG | 4 cut(s) | 331, 399, 619, 780 |
| BssMI | GATC | 3 cut(s) | 23, 582, 714 |
| BssNI | GRCGYC | 1 cut(s) | 365 |
| BssSI | CACGAG | 1 cut(s) | 665 |
| BssT1I | CCWWGG | 4 cut(s) | 331, 399, 619, 780 |
| Bst2BI | CACGAG | 1 cut(s) | 665 |
| Bst4CI | ACNGT | 1 cut(s) | 485 |
| Bst6I | CTCTTC | 2 cut(s) | 44, 578 |
| BstACI | GRCGYC | 1 cut(s) | 365 |
| BstDEI | CTNAG | 3 cut(s) | 220, 372, 696 |
| BstDSI | CCRYGG | 2 cut(s) | 619, 780 |
| BstEII | GGTNACC | 1 cut(s) | 725 |
| BstF5I | GGATG | 3 cut(s) | 341, 427, 629 |
| BstKTI | GATC | 3 cut(s) | 26, 585, 717 |
| BstMAI | GTCTC | 2 cut(s) | 288, 638 |
| BstMBI | GATC | 3 cut(s) | 23, 582, 714 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 242, 738, 759 |
| BstPI | GGTNACC | 1 cut(s) | 725 |
| BstV1I | GCAGC | 1 cut(s) | 248 |
| BstV2I | GAAGAC | 1 cut(s) | 360 |
| Bsu15I | ATCGAT | 1 cut(s) | 717 |
| BsuI | GTATCC | 1 cut(s) | 608 |
| BsuRI | GGCC | 2 cut(s) | 397, 753 |
| BsuTUI | ATCGAT | 1 cut(s) | 717 |
| BtgI | CCRYGG | 2 cut(s) | 619, 780 |
| BtsCI | GGATG | 3 cut(s) | 341, 427, 629 |
| BtsIMutI | CAGTG | 2 cut(s) | 563, 761 |
| Cfr13I | GGNCC | 1 cut(s) | 396 |
| ClaI | ATCGAT | 1 cut(s) | 717 |
| Csp6I | GTAC | 4 cut(s) | 310, 346, 376, 820 |
| CviAII | CATG | 6 cut(s) | 361, 525, 578, 620, 781, 817 |
| CviJI | RGCY | 8 cut(s) | 225, 275, 383, 397, 502, 551, 571, 753 |
| CviKI_1 | RGCY | 8 cut(s) | 225, 275, 383, 397, 502, 551, 571, 753 |
| CviQI | GTAC | 4 cut(s) | 310, 346, 376, 820 |
| DdeI | CTNAG | 3 cut(s) | 220, 372, 696 |
| DpnI | GATC | 3 cut(s) | 25, 584, 716 |
| DpnII | GATC | 3 cut(s) | 23, 582, 714 |
| Eam1104I | CTCTTC | 2 cut(s) | 44, 578 |
| EarI | CTCTTC | 2 cut(s) | 44, 578 |
| Eco130I | CCWWGG | 4 cut(s) | 331, 399, 619, 780 |
| Eco31I | GGTCTC | 1 cut(s) | 638 |
| Eco57I | CTGAAG | 2 cut(s) | 25, 587 |
| Eco91I | GGTNACC | 1 cut(s) | 725 |
| EcoO109I | RGGNCCY | 1 cut(s) | 396 |
| EcoO65I | GGTNACC | 1 cut(s) | 725 |
| EcoRI | GAATTC | 1 cut(s) | 172 |
| EcoT14I | CCWWGG | 4 cut(s) | 331, 399, 619, 780 |
| ErhI | CCWWGG | 4 cut(s) | 331, 399, 619, 780 |
| Esp3I | CGTCTC | 1 cut(s) | 288 |
| FaeI | CATG | 6 cut(s) | 364, 528, 581, 623, 784, 820 |
| FaqI | GGGAC | 2 cut(s) | 523, 786 |
| FatI | CATG | 6 cut(s) | 360, 524, 577, 619, 780, 816 |
| Fnu4HI | GCNGC | 1 cut(s) | 237 |
| FokI | GGATG | 3 cut(s) | 348, 434, 636 |
| Fsp4HI | GCNGC | 1 cut(s) | 237 |
| FspBI | CTAG | 1 cut(s) | 200 |
| GluI | GCNGC | 1 cut(s) | 237 |
| HaeIII | GGCC | 2 cut(s) | 397, 753 |
| Hin1I | GRCGYC | 1 cut(s) | 365 |
| Hin1II | CATG | 6 cut(s) | 364, 528, 581, 623, 784, 820 |
| HinfI | GANTC | 1 cut(s) | 386 |
| Hpy166II | GTNNAC | 1 cut(s) | 197 |
| Hpy188I | TCNGA | 1 cut(s) | 697 |
| Hpy188III | TCNNGA | 3 cut(s) | 475, 554, 665 |
| Hpy8I | GTNNAC | 1 cut(s) | 197 |
| HpyAV | CCTTC | 2 cut(s) | 530, 716 |
| HpyCH4III | ACNGT | 1 cut(s) | 485 |
| HpyCH4IV | ACGT | 1 cut(s) | 365 |
| HpyCH4V | TGCA | 4 cut(s) | 135, 236, 326, 682 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 242, 738, 759 |
| HpyF3I | CTNAG | 3 cut(s) | 220, 372, 696 |
| HpySE526I | ACGT | 1 cut(s) | 365 |
| Hsp92I | GRCGYC | 1 cut(s) | 365 |
| Hsp92II | CATG | 6 cut(s) | 364, 528, 581, 623, 784, 820 |
| Kzo9I | GATC | 3 cut(s) | 23, 582, 714 |
| LguI | GCTCTTC | 1 cut(s) | 578 |
| LmnI | GCTCC | 2 cut(s) | 114, 759 |
| LpnPI | CCDG | 5 cut(s) | 207, 298, 561, 615, 767 |
| Lsp1109I | GCAGC | 1 cut(s) | 248 |
| LweI | GCATC | 2 cut(s) | 412, 750 |
| MaeI | CTAG | 1 cut(s) | 200 |
| MaeII | ACGT | 1 cut(s) | 365 |
| MaeIII | GTNAC | 1 cut(s) | 725 |
| MalI | GATC | 3 cut(s) | 25, 584, 716 |
| MboI | GATC | 3 cut(s) | 23, 582, 714 |
| MboII | GAAGA | 4 cut(s) | 31, 316, 360, 565 |
| MhlI | GDGCHC | 1 cut(s) | 561 |
| MluCI | AATT | 6 cut(s) | 66, 85, 172, 210, 287, 800 |
| MlyI | GAGTC | 1 cut(s) | 380 |
| MmeI | TCCRAC | 2 cut(s) | 37, 592 |
| MnlI | CCTC | 6 cut(s) | 387, 397, 514, 691, 743, 763 |
| MroXI | GAANNNNTTC | 1 cut(s) | 572 |
| MseI | TTAA | 2 cut(s) | 351, 641 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 242, 738, 759 |
| NcoI | CCATGG | 2 cut(s) | 619, 780 |
| NdeII | GATC | 3 cut(s) | 23, 582, 714 |
| NlaIII | CATG | 6 cut(s) | 364, 528, 581, 623, 784, 820 |
| NlaIV | GGNNCC | 1 cut(s) | 546 |
| PciSI | GCTCTTC | 1 cut(s) | 578 |
| PdmI | GAANNNNTTC | 1 cut(s) | 572 |
| PkrI | GCNGC | 1 cut(s) | 238 |
| PleI | GAGTC | 1 cut(s) | 380 |
| PpsI | GAGTC | 1 cut(s) | 380 |
| PspEI | GGTNACC | 1 cut(s) | 725 |
| PspN4I | GGNNCC | 1 cut(s) | 546 |
| PspPI | GGNCC | 1 cut(s) | 396 |
| RsaI | GTAC | 4 cut(s) | 311, 347, 377, 821 |
| RsaNI | GTAC | 4 cut(s) | 310, 346, 376, 820 |
| SapI | GCTCTTC | 1 cut(s) | 578 |
| SaqAI | TTAA | 2 cut(s) | 351, 641 |
| SatI | GCNGC | 1 cut(s) | 237 |
| Sau3AI | GATC | 3 cut(s) | 23, 582, 714 |
| Sau96I | GGNCC | 1 cut(s) | 396 |
| ScaI | AGTACT | 1 cut(s) | 311 |
| SchI | GAGTC | 1 cut(s) | 380 |
| SduI | GDGCHC | 1 cut(s) | 561 |
| SetI | ASST | 6 cut(s) | 277, 368, 504, 553, 573, 727 |
| SfaNI | GCATC | 2 cut(s) | 412, 750 |
| SmlI | CTYRAG | 1 cut(s) | 554 |
| SmoI | CTYRAG | 1 cut(s) | 554 |
| Sse9I | AATT | 6 cut(s) | 66, 85, 172, 210, 287, 800 |
| SsiI | CCGC | 2 cut(s) | 72, 730 |
| SspI | AATATT | 1 cut(s) | 122 |
| SspMI | CTAG | 1 cut(s) | 200 |
| StyI | CCWWGG | 4 cut(s) | 331, 399, 619, 780 |
| TaaI | ACNGT | 1 cut(s) | 485 |
| TaiI | ACGT | 1 cut(s) | 368 |
| TaqI | TCGA | 3 cut(s) | 22, 441, 717 |
| TasI | AATT | 6 cut(s) | 66, 85, 172, 210, 287, 800 |
| TatI | WGTACW | 3 cut(s) | 309, 375, 819 |
| Tru1I | TTAA | 2 cut(s) | 351, 641 |
| Tru9I | TTAA | 2 cut(s) | 351, 641 |
| TscAI | CASTG | 2 cut(s) | 570, 761 |
| TseI | GCWGC | 1 cut(s) | 236 |
| TspDTI | ATGAA | 4 cut(s) | 5, 17, 65, 735 |
| TspRI | CASTG | 2 cut(s) | 570, 761 |
| XapI | RAATTY | 1 cut(s) | 172 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 338, 626 |
| XmnI | GAANNNNTTC | 1 cut(s) | 572 |
| XspI | CTAG | 1 cut(s) | 200 |
| ZraI | GACGTC | 1 cut(s) | 366 |
| ZrmI | AGTACT | 1 cut(s) | 311 |