Transcription factor
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g17290 |
| malus_domestica | MD10G1146100.v1.1 |
| prunus_persica | Prupe.8G184500_v2.0.a1 |
| pyrus_communis | pycom05g14630 |
| rosa_chinensis | RchiOBHm_Chr4g0427301 RchiOBHm_Chr6g0288011 |
| rosa_laevigata | RLG00000012930 RLG00000022524 |
| rosa_multiflora | Rmu_sc0000951.1_g000010 Rmu_sc0009000.1_g000002 Rmu_ssc0000126.1_g000041 |
| rosa_roxburghii | Rroxscaffold_2G00096360 Rroxscaffold_6G00389110 Rroxscaffold_7G00186780 Rroxscaffold_7G00186790 |
| rosa_rugosa | Rorug06G0143600 |
| rosa_samantha | Rh5CG423800 Rh6AG256600 Rh6AG303600 Rh6BG051200 Rh6BG259300 Rh6BG259600 Rh6CG258700 Rh6CG300100 Rh6CG317200 Rh6DG250600 Rh6DG250800 Rh6DG302200 |
| rosa_wichuraiana | Rw6G026250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 304 |
| AclWI | GGATC | 2 cut(s) | 98, 111 |
| AfaI | GTAC | 1 cut(s) | 176 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 66, 142 |
| AgsI | TTSAA | 7 cut(s) | 12, 18, 86, 191, 218, 295, 329 |
| AluBI | AGCT | 2 cut(s) | 112, 224 |
| AluI | AGCT | 2 cut(s) | 112, 224 |
| AlwI | GGATC | 2 cut(s) | 98, 111 |
| ApeKI | GCWGC | 3 cut(s) | 74, 221, 224 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 324 |
| BamHI | GGATCC | 1 cut(s) | 103 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 158, 190 |
| BbsI | GAAGAC | 1 cut(s) | 264 |
| BbvI | GCAGC | 3 cut(s) | 61, 211, 233 |
| BceAI | ACGGC | 1 cut(s) | 87 |
| BfaI | CTAG | 2 cut(s) | 356, 367 |
| BfmI | CTRYAG | 2 cut(s) | 75, 276 |
| BisI | GCNGC | 3 cut(s) | 75, 222, 225 |
| BlsI | GCNGC | 3 cut(s) | 76, 223, 226 |
| BmiI | GGNNCC | 1 cut(s) | 105 |
| BpiI | GAAGAC | 1 cut(s) | 264 |
| BpmI | CTGGAG | 1 cut(s) | 37 |
| BsaWI | WCCGGW | 1 cut(s) | 135 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 66, 142 |
| BseGI | GGATG | 1 cut(s) | 305 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 66, 142 |
| BseMII | CTCAG | 1 cut(s) | 251 |
| BseXI | GCAGC | 3 cut(s) | 61, 211, 233 |
| BsiSI | CCGG | 1 cut(s) | 136 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 66, 142 |
| BsmI | GAATGC | 1 cut(s) | 197 |
| Bsp143I | GATC | 1 cut(s) | 103 |
| BspCNI | CTCAG | 1 cut(s) | 250 |
| BspLI | GGNNCC | 1 cut(s) | 105 |
| BspMAI | CTGCAG | 2 cut(s) | 79, 280 |
| BspPI | GGATC | 2 cut(s) | 98, 111 |
| BssMI | GATC | 1 cut(s) | 103 |
| Bst4CI | ACNGT | 1 cut(s) | 341 |
| BstC8I | GCNNGC | 1 cut(s) | 114 |
| BstDEI | CTNAG | 1 cut(s) | 237 |
| BstF5I | GGATG | 1 cut(s) | 305 |
| BstKTI | GATC | 1 cut(s) | 106 |
| BstMBI | GATC | 1 cut(s) | 103 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 233 |
| BstSFI | CTRYAG | 2 cut(s) | 75, 276 |
| BstV1I | GCAGC | 3 cut(s) | 61, 211, 233 |
| BstV2I | GAAGAC | 1 cut(s) | 264 |
| BstX2I | RGATCY | 1 cut(s) | 103 |
| BstYI | RGATCY | 1 cut(s) | 103 |
| BtsCI | GGATG | 1 cut(s) | 305 |
| Cac8I | GCNNGC | 1 cut(s) | 114 |
| CseI | GACGC | 1 cut(s) | 193 |
| Csp6I | GTAC | 1 cut(s) | 175 |
| CviAII | CATG | 1 cut(s) | 38 |
| CviJI | RGCY | 4 cut(s) | 74, 112, 146, 224 |
| CviKI_1 | RGCY | 4 cut(s) | 74, 112, 146, 224 |
| CviQI | GTAC | 1 cut(s) | 175 |
| DdeI | CTNAG | 1 cut(s) | 237 |
| DpnI | GATC | 1 cut(s) | 105 |
| DpnII | GATC | 1 cut(s) | 103 |
| FaeI | CATG | 1 cut(s) | 41 |
| FaiI | YATR | 7 cut(s) | 6, 39, 128, 149, 200, 250, 272 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 36 |
| FatI | CATG | 1 cut(s) | 37 |
| FblI | GTMKAC | 1 cut(s) | 304 |
| Fnu4HI | GCNGC | 3 cut(s) | 75, 222, 225 |
| FokI | GGATG | 1 cut(s) | 312 |
| Fsp4HI | GCNGC | 3 cut(s) | 75, 222, 225 |
| FspBI | CTAG | 2 cut(s) | 356, 367 |
| GluI | GCNGC | 3 cut(s) | 75, 222, 225 |
| GsuI | CTGGAG | 1 cut(s) | 37 |
| HapII | CCGG | 1 cut(s) | 136 |
| HgaI | GACGC | 1 cut(s) | 193 |
| Hin1II | CATG | 1 cut(s) | 41 |
| HindIII | AAGCTT | 1 cut(s) | 110 |
| HpaII | CCGG | 1 cut(s) | 136 |
| Hpy166II | GTNNAC | 2 cut(s) | 175, 305 |
| Hpy188I | TCNGA | 2 cut(s) | 183, 231 |
| Hpy8I | GTNNAC | 2 cut(s) | 175, 305 |
| HpyAV | CCTTC | 2 cut(s) | 163, 247 |
| HpyCH4III | ACNGT | 1 cut(s) | 341 |
| HpyCH4IV | ACGT | 1 cut(s) | 177 |
| HpyCH4V | TGCA | 6 cut(s) | 77, 195, 211, 270, 278, 334 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 233 |
| HpyF3I | CTNAG | 1 cut(s) | 237 |
| HpySE526I | ACGT | 1 cut(s) | 177 |
| Hsp92II | CATG | 1 cut(s) | 41 |
| Kzo9I | GATC | 1 cut(s) | 103 |
| LpnPI | CCDG | 2 cut(s) | 67, 149 |
| Lsp1109I | GCAGC | 3 cut(s) | 61, 211, 233 |
| MaeI | CTAG | 2 cut(s) | 356, 367 |
| MaeII | ACGT | 1 cut(s) | 177 |
| MalI | GATC | 1 cut(s) | 105 |
| MboI | GATC | 1 cut(s) | 103 |
| MboII | GAAGA | 5 cut(s) | 98, 178, 269, 332, 355 |
| MfeI | CAATTG | 1 cut(s) | 329 |
| MflI | RGATCY | 1 cut(s) | 103 |
| MluCI | AATT | 1 cut(s) | 329 |
| MmeI | TCCRAC | 1 cut(s) | 222 |
| MnlI | CCTC | 1 cut(s) | 132 |
| MroXI | GAANNNNTTC | 1 cut(s) | 324 |
| MspA1I | CMGCKG | 1 cut(s) | 224 |
| MspI | CCGG | 1 cut(s) | 136 |
| MunI | CAATTG | 1 cut(s) | 329 |
| Mva1269I | GAATGC | 1 cut(s) | 197 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 233 |
| NdeII | GATC | 1 cut(s) | 103 |
| NlaIII | CATG | 1 cut(s) | 41 |
| NlaIV | GGNNCC | 1 cut(s) | 105 |
| PctI | GAATGC | 1 cut(s) | 197 |
| PdmI | GAANNNNTTC | 1 cut(s) | 324 |
| PflFI | GACNNNGTC | 1 cut(s) | 38 |
| PkrI | GCNGC | 3 cut(s) | 76, 223, 226 |
| PspN4I | GGNNCC | 1 cut(s) | 105 |
| PstI | CTGCAG | 2 cut(s) | 79, 280 |
| PsuI | RGATCY | 1 cut(s) | 103 |
| PsyI | GACNNNGTC | 1 cut(s) | 38 |
| PvuII | CAGCTG | 1 cut(s) | 224 |
| RsaI | GTAC | 1 cut(s) | 176 |
| RsaNI | GTAC | 1 cut(s) | 175 |
| SatI | GCNGC | 3 cut(s) | 75, 222, 225 |
| Sau3AI | GATC | 1 cut(s) | 103 |
| SetI | ASST | 5 cut(s) | 114, 143, 174, 180, 226 |
| SfcI | CTRYAG | 2 cut(s) | 75, 276 |
| SgeI | CNNG | 9 cut(s) | 24, 50, 66, 113, 125, 148, 200, 276, 347 |
| Sse9I | AATT | 1 cut(s) | 329 |
| SspI | AATATT | 1 cut(s) | 313 |
| SspMI | CTAG | 2 cut(s) | 356, 367 |
| TaaI | ACNGT | 1 cut(s) | 341 |
| TaiI | ACGT | 1 cut(s) | 180 |
| TasI | AATT | 1 cut(s) | 329 |
| TseI | GCWGC | 3 cut(s) | 74, 221, 224 |
| TspDTI | ATGAA | 1 cut(s) | 164 |
| Tth111I | GACNNNGTC | 1 cut(s) | 38 |
| XmiI | GTMKAC | 1 cut(s) | 304 |
| XmnI | GAANNNNTTC | 1 cut(s) | 324 |
| XspI | CTAG | 2 cut(s) | 356, 367 |