No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_2g17290 |
| malus_domestica | MD10G1146100.v1.1 |
| prunus_persica | Prupe.8G184500_v2.0.a1 |
| pyrus_communis | pycom05g14630 |
| rosa_chinensis | RchiOBHm_Chr4g0427301 RchiOBHm_Chr6g0288011 |
| rosa_laevigata | RLG00000012930 RLG00000022524 |
| rosa_multiflora | Rmu_sc0000951.1_g000010 Rmu_sc0009000.1_g000002 Rmu_ssc0000126.1_g000041 |
| rosa_roxburghii | Rroxscaffold_2G00096360 Rroxscaffold_6G00389110 Rroxscaffold_7G00186780 Rroxscaffold_7G00186790 |
| rosa_rugosa | Rorug06G0143600 |
| rosa_samantha | Rh5CG423800 Rh6AG256600 Rh6AG303600 Rh6BG051200 Rh6BG259300 Rh6BG259600 Rh6CG258700 Rh6CG300100 Rh6CG317200 Rh6DG250600 Rh6DG250800 Rh6DG302200 |
| rosa_wichuraiana | Rw6G026250 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcoI | YGGCCR | 1 cut(s) | 7 |
| AcsI | RAATTY | 2 cut(s) | 13, 96 |
| AfaI | GTAC | 1 cut(s) | 186 |
| AgsI | TTSAA | 3 cut(s) | 21, 215, 291 |
| AhlI | ACTAGT | 1 cut(s) | 284 |
| AjnI | CCWGG | 1 cut(s) | 47 |
| AluBI | AGCT | 2 cut(s) | 80, 110 |
| AluI | AGCT | 2 cut(s) | 80, 110 |
| Alw21I | GWGCWC | 1 cut(s) | 234 |
| Ama87I | CYCGRG | 1 cut(s) | 116 |
| AoxI | GGCC | 1 cut(s) | 7 |
| ApeKI | GCWGC | 2 cut(s) | 89, 110 |
| ApoI | RAATTY | 2 cut(s) | 13, 96 |
| AvaI | CYCGRG | 1 cut(s) | 116 |
| BalI | TGGCCA | 1 cut(s) | 9 |
| BauI | CACGAG | 1 cut(s) | 167 |
| Bbv12I | GWGCWC | 1 cut(s) | 234 |
| BbvI | GCAGC | 2 cut(s) | 76, 97 |
| BciT130I | CCWGG | 1 cut(s) | 49 |
| BcuI | ACTAGT | 1 cut(s) | 284 |
| BfaI | CTAG | 2 cut(s) | 107, 285 |
| BisI | GCNGC | 2 cut(s) | 90, 111 |
| BlsI | GCNGC | 2 cut(s) | 91, 112 |
| Bme1390I | CCNGG | 1 cut(s) | 49 |
| BmeT110I | CYCGRG | 1 cut(s) | 116 |
| BmrFI | CCNGG | 1 cut(s) | 49 |
| BmsI | GCATC | 1 cut(s) | 193 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 221, 251 |
| Bse1I | ACTGG | 2 cut(s) | 36, 201 |
| BseBI | CCWGG | 1 cut(s) | 49 |
| BseNI | ACTGG | 2 cut(s) | 36, 201 |
| BseXI | GCAGC | 2 cut(s) | 76, 97 |
| BshFI | GGCC | 1 cut(s) | 9 |
| BsiHKAI | GWGCWC | 1 cut(s) | 234 |
| BsiHKCI | CYCGRG | 1 cut(s) | 116 |
| BsnI | GGCC | 1 cut(s) | 9 |
| BsoBI | CYCGRG | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 1 cut(s) | 234 |
| Bsp143I | GATC | 1 cut(s) | 189 |
| BspANI | GGCC | 1 cut(s) | 9 |
| BsrI | ACTGG | 2 cut(s) | 36, 201 |
| BssMI | GATC | 1 cut(s) | 189 |
| BssSI | CACGAG | 1 cut(s) | 167 |
| Bst2BI | CACGAG | 1 cut(s) | 167 |
| Bst2UI | CCWGG | 1 cut(s) | 49 |
| BstC8I | GCNNGC | 1 cut(s) | 78 |
| BstDEI | CTNAG | 1 cut(s) | 53 |
| BstKTI | GATC | 1 cut(s) | 192 |
| BstMBI | GATC | 1 cut(s) | 189 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 86 |
| BstNI | CCWGG | 1 cut(s) | 49 |
| BstSCI | CCNGG | 1 cut(s) | 47 |
| BstV1I | GCAGC | 2 cut(s) | 76, 97 |
| BsuRI | GGCC | 1 cut(s) | 9 |
| Cac8I | GCNNGC | 1 cut(s) | 78 |
| Csp6I | GTAC | 1 cut(s) | 185 |
| CviAII | CATG | 1 cut(s) | 275 |
| CviJI | RGCY | 5 cut(s) | 9, 35, 52, 80, 110 |
| CviKI_1 | RGCY | 5 cut(s) | 9, 35, 52, 80, 110 |
| CviQI | GTAC | 1 cut(s) | 185 |
| DdeI | CTNAG | 1 cut(s) | 53 |
| DpnI | GATC | 1 cut(s) | 191 |
| DpnII | GATC | 1 cut(s) | 189 |
| DraI | TTTAAA | 1 cut(s) | 147 |
| EaeI | YGGCCR | 1 cut(s) | 7 |
| Eco88I | CYCGRG | 1 cut(s) | 116 |
| EcoRII | CCWGG | 1 cut(s) | 47 |
| FaeI | CATG | 1 cut(s) | 278 |
| FaiI | YATR | 4 cut(s) | 38, 87, 132, 276 |
| FatI | CATG | 1 cut(s) | 274 |
| Fnu4HI | GCNGC | 2 cut(s) | 90, 111 |
| Fsp4HI | GCNGC | 2 cut(s) | 90, 111 |
| FspBI | CTAG | 2 cut(s) | 107, 285 |
| GluI | GCNGC | 2 cut(s) | 90, 111 |
| HaeIII | GGCC | 1 cut(s) | 9 |
| Hin1II | CATG | 1 cut(s) | 278 |
| Hpy188III | TCNNGA | 2 cut(s) | 116, 118 |
| HpyCH4V | TGCA | 3 cut(s) | 76, 181, 272 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 86 |
| HpyF3I | CTNAG | 1 cut(s) | 53 |
| Hsp92II | CATG | 1 cut(s) | 278 |
| Kzo9I | GATC | 1 cut(s) | 189 |
| LmnI | GCTCC | 1 cut(s) | 229 |
| LpnPI | CCDG | 4 cut(s) | 17, 34, 61, 182 |
| Lsp1109I | GCAGC | 2 cut(s) | 76, 97 |
| LweI | GCATC | 1 cut(s) | 193 |
| MaeI | CTAG | 2 cut(s) | 107, 285 |
| MalI | GATC | 1 cut(s) | 191 |
| MboI | GATC | 1 cut(s) | 189 |
| MboII | GAAGA | 4 cut(s) | 9, 212, 227, 259 |
| MfeI | CAATTG | 1 cut(s) | 71 |
| MhlI | GDGCHC | 1 cut(s) | 234 |
| MlsI | TGGCCA | 1 cut(s) | 9 |
| MluCI | AATT | 4 cut(s) | 13, 71, 96, 155 |
| MluNI | TGGCCA | 1 cut(s) | 9 |
| MnlI | CCTC | 2 cut(s) | 54, 118 |
| Mox20I | TGGCCA | 1 cut(s) | 9 |
| MscI | TGGCCA | 1 cut(s) | 9 |
| MseI | TTAA | 3 cut(s) | 138, 146, 158 |
| Msp20I | TGGCCA | 1 cut(s) | 9 |
| MspR9I | CCNGG | 1 cut(s) | 49 |
| MunI | CAATTG | 1 cut(s) | 71 |
| MvaI | CCWGG | 1 cut(s) | 49 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 86 |
| NdeII | GATC | 1 cut(s) | 189 |
| NlaIII | CATG | 1 cut(s) | 278 |
| PaeR7I | CTCGAG | 1 cut(s) | 116 |
| PkrI | GCNGC | 2 cut(s) | 91, 112 |
| Psp6I | CCWGG | 1 cut(s) | 47 |
| PspGI | CCWGG | 1 cut(s) | 47 |
| RsaI | GTAC | 1 cut(s) | 186 |
| RsaNI | GTAC | 1 cut(s) | 185 |
| SaqAI | TTAA | 3 cut(s) | 138, 146, 158 |
| SatI | GCNGC | 2 cut(s) | 90, 111 |
| Sau3AI | GATC | 1 cut(s) | 189 |
| ScrFI | CCNGG | 1 cut(s) | 49 |
| SduI | GDGCHC | 1 cut(s) | 234 |
| SetI | ASST | 3 cut(s) | 50, 82, 112 |
| SfaNI | GCATC | 1 cut(s) | 193 |
| Sfr274I | CTCGAG | 1 cut(s) | 116 |
| SlaI | CTCGAG | 1 cut(s) | 116 |
| SmlI | CTYRAG | 1 cut(s) | 116 |
| SmoI | CTYRAG | 1 cut(s) | 116 |
| SpeI | ACTAGT | 1 cut(s) | 284 |
| Sse9I | AATT | 4 cut(s) | 13, 71, 96, 155 |
| SspMI | CTAG | 2 cut(s) | 107, 285 |
| StyD4I | CCNGG | 1 cut(s) | 47 |
| TaqI | TCGA | 1 cut(s) | 117 |
| TasI | AATT | 4 cut(s) | 13, 71, 96, 155 |
| TatI | WGTACW | 1 cut(s) | 184 |
| Tru1I | TTAA | 3 cut(s) | 138, 146, 158 |
| Tru9I | TTAA | 3 cut(s) | 138, 146, 158 |
| TseI | GCWGC | 2 cut(s) | 89, 110 |
| TspDTI | ATGAA | 2 cut(s) | 42, 260 |
| XapI | RAATTY | 2 cut(s) | 13, 96 |
| XhoI | CTCGAG | 1 cut(s) | 116 |
| XspI | CTAG | 2 cut(s) | 107, 285 |