Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g21160 FvH4_5g21160 |
| malus_domestica | MD06G1040600.v1.1 |
| prunus_persica | Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 |
| pyrus_communis | pycom06g03380 |
| rosa_chinensis | RchiOBHm_Chr1g0379241 RchiOBHm_Chr7g0208291 RchiOBHm_Chr7g0235341 |
| rosa_laevigata | RLG00000003230 RLG00000003232 |
| rosa_multiflora | Rmu_co7962606.1_g000001 Rmu_sc0040203.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00101090 Rroxscaffold_2G00122260 Rroxscaffold_3G00250610 Rroxscaffold_5G00350460 Rroxscaffold_5G00361300 |
| rosa_rugosa | Rorug02G0101400 Rorug02G0101500 Rorug02G0101600 Rorug07G0102700.1 Rorug07G0103000 |
| rosa_samantha | Rh4DG103100 Rh5DG324000 Rh7AG237100 Rh7AG237300 Rh7AG445100 Rh7BG232600 Rh7BG232800 Rh7DG243100 Rh7DG243300 |
| rosa_wichuraiana | Rw7G020230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 119 |
| AciI | CCGC | 5 cut(s) | 15, 77, 80, 353, 483 |
| AcoI | YGGCCR | 1 cut(s) | 210 |
| AfaI | GTAC | 1 cut(s) | 549 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 454 |
| AgsI | TTSAA | 1 cut(s) | 535 |
| AjnI | CCWGG | 1 cut(s) | 203 |
| AluBI | AGCT | 2 cut(s) | 40, 220 |
| AluI | AGCT | 2 cut(s) | 40, 220 |
| AoxI | GGCC | 2 cut(s) | 210, 509 |
| ApeKI | GCWGC | 2 cut(s) | 37, 40 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 143, 175 |
| AspLEI | GCGC | 1 cut(s) | 45 |
| AspS9I | GGNCC | 1 cut(s) | 509 |
| BbsI | GAAGAC | 1 cut(s) | 115 |
| BbvI | GCAGC | 2 cut(s) | 27, 49 |
| BccI | CCATC | 4 cut(s) | 202, 266, 371, 520 |
| BceAI | ACGGC | 2 cut(s) | 154, 592 |
| BciT130I | CCWGG | 1 cut(s) | 205 |
| BciVI | GTATCC | 1 cut(s) | 374 |
| BfaI | CTAG | 1 cut(s) | 363 |
| BfuI | GTATCC | 1 cut(s) | 374 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 209 |
| BisI | GCNGC | 4 cut(s) | 38, 41, 80, 483 |
| BlsI | GCNGC | 4 cut(s) | 39, 42, 81, 484 |
| Bme1390I | CCNGG | 1 cut(s) | 205 |
| BmgT120I | GGNCC | 1 cut(s) | 509 |
| BmiI | GGNNCC | 1 cut(s) | 510 |
| BmrFI | CCNGG | 1 cut(s) | 205 |
| BmsI | GCATC | 2 cut(s) | 190, 635 |
| BpiI | GAAGAC | 1 cut(s) | 115 |
| BpmI | CTGGAG | 1 cut(s) | 450 |
| BpuEI | CTTGAG | 1 cut(s) | 481 |
| BsaAI | YACGTR | 1 cut(s) | 67 |
| BsaJI | CCNNGG | 2 cut(s) | 21, 574 |
| BsaWI | WCCGGW | 1 cut(s) | 550 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 454 |
| BseBI | CCWGG | 1 cut(s) | 205 |
| BseDI | CCNNGG | 2 cut(s) | 21, 574 |
| BseGI | GGATG | 2 cut(s) | 213, 512 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 454 |
| BseXI | GCAGC | 2 cut(s) | 27, 49 |
| Bsh1285I | CGRYCG | 1 cut(s) | 565 |
| BshFI | GGCC | 2 cut(s) | 212, 511 |
| BsiEI | CGRYCG | 1 cut(s) | 565 |
| BsiSI | CCGG | 1 cut(s) | 551 |
| BslFI | GGGAC | 2 cut(s) | 472, 513 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 454 |
| BsmFI | GGGAC | 2 cut(s) | 472, 513 |
| BsnI | GGCC | 2 cut(s) | 212, 511 |
| Bsp143I | GATC | 1 cut(s) | 562 |
| Bsp19I | CCATGG | 1 cut(s) | 21 |
| BspACI | CCGC | 5 cut(s) | 15, 77, 80, 353, 483 |
| BspANI | GGCC | 2 cut(s) | 212, 511 |
| BspLI | GGNNCC | 1 cut(s) | 510 |
| BssECI | CCNNGG | 2 cut(s) | 21, 574 |
| BssMI | GATC | 1 cut(s) | 562 |
| BssT1I | CCWWGG | 1 cut(s) | 21 |
| Bst2UI | CCWGG | 1 cut(s) | 205 |
| Bst6I | CTCTTC | 1 cut(s) | 365 |
| BstBAI | YACGTR | 1 cut(s) | 67 |
| BstC8I | GCNNGC | 1 cut(s) | 143 |
| BstDEI | CTNAG | 1 cut(s) | 524 |
| BstDSI | CCRYGG | 2 cut(s) | 21, 574 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 452 |
| BstF5I | GGATG | 2 cut(s) | 213, 512 |
| BstHHI | GCGC | 1 cut(s) | 45 |
| BstKTI | GATC | 1 cut(s) | 565 |
| BstMBI | GATC | 1 cut(s) | 562 |
| BstMCI | CGRYCG | 1 cut(s) | 565 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 37, 209, 359, 601 |
| BstNI | CCWGG | 1 cut(s) | 205 |
| BstSCI | CCNGG | 1 cut(s) | 203 |
| BstV1I | GCAGC | 2 cut(s) | 27, 49 |
| BstV2I | GAAGAC | 1 cut(s) | 115 |
| BsuI | GTATCC | 1 cut(s) | 374 |
| BsuRI | GGCC | 2 cut(s) | 212, 511 |
| BtgI | CCRYGG | 2 cut(s) | 21, 574 |
| BtsCI | GGATG | 2 cut(s) | 213, 512 |
| Cac8I | GCNNGC | 1 cut(s) | 143 |
| CfoI | GCGC | 1 cut(s) | 45 |
| Cfr13I | GGNCC | 1 cut(s) | 509 |
| Csp6I | GTAC | 1 cut(s) | 548 |
| CviAII | CATG | 3 cut(s) | 22, 622, 661 |
| CviJI | RGCY | 8 cut(s) | 40, 141, 212, 220, 414, 482, 511, 560 |
| CviKI_1 | RGCY | 8 cut(s) | 40, 141, 212, 220, 414, 482, 511, 560 |
| CviQI | GTAC | 1 cut(s) | 548 |
| DdeI | CTNAG | 1 cut(s) | 524 |
| DpnI | GATC | 1 cut(s) | 564 |
| DpnII | GATC | 1 cut(s) | 562 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 119 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 119 |
| EaeI | YGGCCR | 1 cut(s) | 210 |
| Eam1104I | CTCTTC | 1 cut(s) | 365 |
| EarI | CTCTTC | 1 cut(s) | 365 |
| EciI | GGCGGA | 1 cut(s) | 66 |
| Eco130I | CCWWGG | 1 cut(s) | 21 |
| Eco32I | GATATC | 1 cut(s) | 445 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 452 |
| EcoRII | CCWGG | 1 cut(s) | 203 |
| EcoRV | GATATC | 1 cut(s) | 445 |
| EcoT14I | CCWWGG | 1 cut(s) | 21 |
| ErhI | CCWWGG | 1 cut(s) | 21 |
| FaeI | CATG | 3 cut(s) | 25, 625, 664 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 342, 374 |
| FaqI | GGGAC | 2 cut(s) | 472, 513 |
| FatI | CATG | 3 cut(s) | 21, 621, 660 |
| Fnu4HI | GCNGC | 4 cut(s) | 38, 41, 80, 483 |
| FokI | GGATG | 2 cut(s) | 220, 499 |
| Fsp4HI | GCNGC | 4 cut(s) | 38, 41, 80, 483 |
| FspBI | CTAG | 1 cut(s) | 363 |
| GlaI | GCGC | 1 cut(s) | 44 |
| GluI | GCNGC | 4 cut(s) | 38, 41, 80, 483 |
| GsuI | CTGGAG | 1 cut(s) | 450 |
| HaeIII | GGCC | 2 cut(s) | 212, 511 |
| HapII | CCGG | 1 cut(s) | 551 |
| HhaI | GCGC | 1 cut(s) | 45 |
| Hin1II | CATG | 3 cut(s) | 25, 625, 664 |
| Hin6I | GCGC | 1 cut(s) | 43 |
| HinP1I | GCGC | 1 cut(s) | 43 |
| HinfI | GANTC | 2 cut(s) | 104, 292 |
| HpaII | CCGG | 1 cut(s) | 551 |
| Hpy166II | GTNNAC | 2 cut(s) | 70, 571 |
| Hpy188I | TCNGA | 4 cut(s) | 109, 164, 236, 291 |
| Hpy188III | TCNNGA | 2 cut(s) | 347, 467 |
| Hpy8I | GTNNAC | 2 cut(s) | 70, 571 |
| Hpy99I | CGWCG | 3 cut(s) | 137, 140, 182 |
| HpyAV | CCTTC | 1 cut(s) | 197 |
| HpyCH4IV | ACGT | 2 cut(s) | 66, 168 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 37, 209, 359, 601 |
| HpyF3I | CTNAG | 1 cut(s) | 524 |
| HpySE526I | ACGT | 2 cut(s) | 66, 168 |
| Hsp92II | CATG | 3 cut(s) | 25, 625, 664 |
| HspAI | GCGC | 1 cut(s) | 43 |
| Kzo9I | GATC | 1 cut(s) | 562 |
| LmnI | GCTCC | 1 cut(s) | 601 |
| LpnPI | CCDG | 8 cut(s) | 190, 217, 332, 418, 428, 480, 492, 564 |
| Lsp1109I | GCAGC | 2 cut(s) | 27, 49 |
| LweI | GCATC | 2 cut(s) | 190, 635 |
| MaeI | CTAG | 1 cut(s) | 363 |
| MaeII | ACGT | 2 cut(s) | 66, 168 |
| MalI | GATC | 1 cut(s) | 564 |
| MboI | GATC | 1 cut(s) | 562 |
| MboII | GAAGA | 4 cut(s) | 115, 382, 554, 566 |
| MfeI | CAATTG | 2 cut(s) | 192, 630 |
| MluCI | AATT | 3 cut(s) | 192, 337, 630 |
| MlyI | GAGTC | 1 cut(s) | 113 |
| MmeI | TCCRAC | 2 cut(s) | 73, 259 |
| MnlI | CCTC | 8 cut(s) | 56, 71, 93, 297, 448, 505, 532, 644 |
| MseI | TTAA | 2 cut(s) | 264, 336 |
| MspA1I | CMGCKG | 1 cut(s) | 40 |
| MspI | CCGG | 1 cut(s) | 551 |
| MspR9I | CCNGG | 1 cut(s) | 205 |
| MunI | CAATTG | 2 cut(s) | 192, 630 |
| MvaI | CCWGG | 1 cut(s) | 205 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 37, 209, 359, 601 |
| NcoI | CCATGG | 1 cut(s) | 21 |
| NdeII | GATC | 1 cut(s) | 562 |
| NlaIII | CATG | 3 cut(s) | 25, 625, 664 |
| NlaIV | GGNNCC | 1 cut(s) | 510 |
| NmeAIII | GCCGAG | 1 cut(s) | 238 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 174 |
| PfeI | GAWTC | 1 cut(s) | 292 |
| PkrI | GCNGC | 4 cut(s) | 39, 42, 81, 484 |
| Ple19I | CGATCG | 1 cut(s) | 565 |
| PleI | GAGTC | 1 cut(s) | 112 |
| PpsI | GAGTC | 1 cut(s) | 112 |
| Ppu21I | YACGTR | 1 cut(s) | 67 |
| Psp6I | CCWGG | 1 cut(s) | 203 |
| PspGI | CCWGG | 1 cut(s) | 203 |
| PspN4I | GGNNCC | 1 cut(s) | 510 |
| PspPI | GGNCC | 1 cut(s) | 509 |
| PvuI | CGATCG | 1 cut(s) | 565 |
| PvuII | CAGCTG | 1 cut(s) | 40 |
| RsaI | GTAC | 1 cut(s) | 549 |
| RsaNI | GTAC | 1 cut(s) | 548 |
| SaqAI | TTAA | 2 cut(s) | 264, 336 |
| SatI | GCNGC | 4 cut(s) | 38, 41, 80, 483 |
| Sau3AI | GATC | 1 cut(s) | 562 |
| Sau96I | GGNCC | 1 cut(s) | 509 |
| SchI | GAGTC | 1 cut(s) | 113 |
| ScrFI | CCNGG | 1 cut(s) | 205 |
| SetI | ASST | 7 cut(s) | 42, 69, 171, 189, 222, 437, 503 |
| SfaNI | GCATC | 2 cut(s) | 190, 635 |
| SmlI | CTYRAG | 1 cut(s) | 496 |
| SmoI | CTYRAG | 1 cut(s) | 496 |
| Sse9I | AATT | 3 cut(s) | 192, 337, 630 |
| SsiI | CCGC | 5 cut(s) | 15, 77, 80, 353, 483 |
| SspMI | CTAG | 1 cut(s) | 363 |
| StyD4I | CCNGG | 1 cut(s) | 203 |
| StyI | CCWWGG | 1 cut(s) | 21 |
| TaiI | ACGT | 2 cut(s) | 69, 171 |
| TaqI | TCGA | 4 cut(s) | 150, 180, 222, 565 |
| TasI | AATT | 3 cut(s) | 192, 337, 630 |
| TauI | GCSGC | 2 cut(s) | 82, 485 |
| TfiI | GAWTC | 1 cut(s) | 292 |
| Tru1I | TTAA | 2 cut(s) | 264, 336 |
| Tru9I | TTAA | 2 cut(s) | 264, 336 |
| TseI | GCWGC | 2 cut(s) | 37, 40 |
| TspGWI | ACGGA | 1 cut(s) | 271 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 452 |
| XspI | CTAG | 1 cut(s) | 363 |