Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g21160 FvH4_5g21160 |
| malus_domestica | MD06G1040600.v1.1 |
| prunus_persica | Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 |
| pyrus_communis | pycom06g03380 |
| rosa_chinensis | RchiOBHm_Chr1g0379241 RchiOBHm_Chr7g0208291 RchiOBHm_Chr7g0235341 |
| rosa_laevigata | RLG00000003230 RLG00000003232 |
| rosa_multiflora | Rmu_co7962606.1_g000001 Rmu_sc0040203.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00101090 Rroxscaffold_2G00122260 Rroxscaffold_3G00250610 Rroxscaffold_5G00350460 Rroxscaffold_5G00361300 |
| rosa_rugosa | Rorug02G0101400 Rorug02G0101500 Rorug02G0101600 Rorug07G0102700.1 Rorug07G0103000 |
| rosa_samantha | Rh4DG103100 Rh5DG324000 Rh7AG237100 Rh7AG237300 Rh7AG445100 Rh7BG232600 Rh7BG232800 Rh7DG243100 Rh7DG243300 |
| rosa_wichuraiana | Rw7G020230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 220 |
| AcsI | RAATTY | 1 cut(s) | 205 |
| AhlI | ACTAGT | 1 cut(s) | 80 |
| AjnI | CCWGG | 1 cut(s) | 13 |
| Alw26I | GTCTC | 1 cut(s) | 24 |
| ApoI | RAATTY | 1 cut(s) | 205 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 63 |
| AspLEI | GCGC | 1 cut(s) | 220 |
| BbsI | GAAGAC | 1 cut(s) | 57 |
| BciT130I | CCWGG | 1 cut(s) | 15 |
| BciVI | GTATCC | 1 cut(s) | 21 |
| BcoDI | GTCTC | 1 cut(s) | 24 |
| BcuI | ACTAGT | 1 cut(s) | 80 |
| BfaI | CTAG | 1 cut(s) | 81 |
| BfuI | GTATCC | 1 cut(s) | 21 |
| Bme1390I | CCNGG | 1 cut(s) | 15 |
| BmrFI | CCNGG | 1 cut(s) | 15 |
| BmsI | GCATC | 1 cut(s) | 154 |
| BpiI | GAAGAC | 1 cut(s) | 57 |
| BsaI | GGTCTC | 1 cut(s) | 24 |
| BsaJI | CCNNGG | 1 cut(s) | 14 |
| BseBI | CCWGG | 1 cut(s) | 15 |
| BseDI | CCNNGG | 1 cut(s) | 14 |
| BseGI | GGATG | 1 cut(s) | 136 |
| BsgI | GTGCAG | 1 cut(s) | 105 |
| Bsh1236I | CGCG | 1 cut(s) | 220 |
| BslFI | GGGAC | 1 cut(s) | 21 |
| BsmAI | GTCTC | 1 cut(s) | 24 |
| BsmFI | GGGAC | 1 cut(s) | 21 |
| BsmI | GAATGC | 1 cut(s) | 220 |
| Bso31I | GGTCTC | 1 cut(s) | 24 |
| BspFNI | CGCG | 1 cut(s) | 220 |
| BspHI | TCATGA | 1 cut(s) | 160 |
| BspTNI | GGTCTC | 1 cut(s) | 24 |
| BssECI | CCNNGG | 1 cut(s) | 14 |
| Bst2UI | CCWGG | 1 cut(s) | 15 |
| BstDEI | CTNAG | 1 cut(s) | 32 |
| BstF5I | GGATG | 1 cut(s) | 136 |
| BstFNI | CGCG | 1 cut(s) | 220 |
| BstHHI | GCGC | 1 cut(s) | 220 |
| BstMAI | GTCTC | 1 cut(s) | 24 |
| BstNI | CCWGG | 1 cut(s) | 15 |
| BstSCI | CCNGG | 1 cut(s) | 13 |
| BstUI | CGCG | 1 cut(s) | 220 |
| BstV2I | GAAGAC | 1 cut(s) | 57 |
| BsuI | GTATCC | 1 cut(s) | 21 |
| BtsCI | GGATG | 1 cut(s) | 136 |
| BtsI | GCAGTG | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 1 cut(s) | 116 |
| CciI | TCATGA | 1 cut(s) | 160 |
| CfoI | GCGC | 1 cut(s) | 220 |
| CviAII | CATG | 3 cut(s) | 95, 155, 161 |
| DdeI | CTNAG | 1 cut(s) | 32 |
| Eco31I | GGTCTC | 1 cut(s) | 24 |
| EcoRII | CCWGG | 1 cut(s) | 13 |
| FaeI | CATG | 3 cut(s) | 98, 158, 164 |
| FaiI | YATR | 5 cut(s) | 69, 96, 104, 156, 162 |
| FaqI | GGGAC | 1 cut(s) | 21 |
| FatI | CATG | 3 cut(s) | 94, 154, 160 |
| FokI | GGATG | 1 cut(s) | 143 |
| FspBI | CTAG | 1 cut(s) | 81 |
| GlaI | GCGC | 1 cut(s) | 219 |
| HhaI | GCGC | 1 cut(s) | 220 |
| Hin1II | CATG | 3 cut(s) | 98, 158, 164 |
| Hin6I | GCGC | 1 cut(s) | 218 |
| HinP1I | GCGC | 1 cut(s) | 218 |
| Hpy166II | GTNNAC | 1 cut(s) | 232 |
| Hpy188III | TCNNGA | 1 cut(s) | 161 |
| Hpy8I | GTNNAC | 1 cut(s) | 232 |
| HpyAV | CCTTC | 1 cut(s) | 33 |
| HpyCH4IV | ACGT | 1 cut(s) | 228 |
| HpyCH4V | TGCA | 3 cut(s) | 86, 109, 167 |
| HpyF3I | CTNAG | 1 cut(s) | 32 |
| HpySE526I | ACGT | 1 cut(s) | 228 |
| Hsp92II | CATG | 3 cut(s) | 98, 158, 164 |
| HspAI | GCGC | 1 cut(s) | 218 |
| LpnPI | CCDG | 1 cut(s) | 27 |
| LweI | GCATC | 1 cut(s) | 154 |
| MaeI | CTAG | 1 cut(s) | 81 |
| MaeII | ACGT | 1 cut(s) | 228 |
| MboII | GAAGA | 4 cut(s) | 62, 68, 155, 158 |
| MluCI | AATT | 1 cut(s) | 205 |
| MnlI | CCTC | 2 cut(s) | 13, 40 |
| MroXI | GAANNNNTTC | 1 cut(s) | 63 |
| MslI | CAYNNNNRTG | 2 cut(s) | 72, 159 |
| MspR9I | CCNGG | 1 cut(s) | 15 |
| Mva1269I | GAATGC | 1 cut(s) | 220 |
| MvaI | CCWGG | 1 cut(s) | 15 |
| MvnI | CGCG | 1 cut(s) | 220 |
| NlaIII | CATG | 3 cut(s) | 98, 158, 164 |
| PagI | TCATGA | 1 cut(s) | 160 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 60 |
| PctI | GAATGC | 1 cut(s) | 220 |
| PdmI | GAANNNNTTC | 1 cut(s) | 63 |
| Psp6I | CCWGG | 1 cut(s) | 13 |
| PspGI | CCWGG | 1 cut(s) | 13 |
| RseI | CAYNNNNRTG | 2 cut(s) | 72, 159 |
| ScrFI | CCNGG | 1 cut(s) | 15 |
| SetI | ASST | 2 cut(s) | 11, 231 |
| SfaNI | GCATC | 1 cut(s) | 154 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 72, 159 |
| SmlI | CTYRAG | 1 cut(s) | 4 |
| SmoI | CTYRAG | 1 cut(s) | 4 |
| SpeI | ACTAGT | 1 cut(s) | 80 |
| Sse9I | AATT | 1 cut(s) | 205 |
| SspMI | CTAG | 1 cut(s) | 81 |
| StyD4I | CCNGG | 1 cut(s) | 13 |
| TaiI | ACGT | 1 cut(s) | 231 |
| TasI | AATT | 1 cut(s) | 205 |
| TscAI | CASTG | 1 cut(s) | 116 |
| TspDTI | ATGAA | 3 cut(s) | 56, 90, 227 |
| TspRI | CASTG | 1 cut(s) | 116 |
| XapI | RAATTY | 1 cut(s) | 205 |
| XmnI | GAANNNNTTC | 1 cut(s) | 63 |
| XspI | CTAG | 1 cut(s) | 81 |