Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g21160 FvH4_5g21160 |
| malus_domestica | MD06G1040600.v1.1 |
| prunus_persica | Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 |
| pyrus_communis | pycom06g03380 |
| rosa_chinensis | RchiOBHm_Chr1g0379241 RchiOBHm_Chr7g0208291 RchiOBHm_Chr7g0235341 |
| rosa_laevigata | RLG00000003230 RLG00000003232 |
| rosa_multiflora | Rmu_co7962606.1_g000001 Rmu_sc0040203.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00101090 Rroxscaffold_2G00122260 Rroxscaffold_3G00250610 Rroxscaffold_5G00350460 Rroxscaffold_5G00361300 |
| rosa_rugosa | Rorug02G0101400 Rorug02G0101500 Rorug02G0101600 Rorug07G0102700.1 Rorug07G0103000 |
| rosa_samantha | Rh4DG103100 Rh5DG324000 Rh7AG237100 Rh7AG237300 Rh7AG445100 Rh7BG232600 Rh7BG232800 Rh7DG243100 Rh7DG243300 |
| rosa_wichuraiana | Rw7G020230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 382 |
| Acc36I | ACCTGC | 2 cut(s) | 382, 1072 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1667 |
| AccI | GTMKAC | 2 cut(s) | 345, 1175 |
| AccII | CGCG | 1 cut(s) | 80 |
| AccIII | TCCGGA | 1 cut(s) | 29 |
| AciI | CCGC | 7 cut(s) | 104, 149, 532, 671, 1131, 1291, 1789 |
| AclWI | GGATC | 6 cut(s) | 21, 300, 937, 1160, 1955, 1968 |
| AcoI | YGGCCR | 1 cut(s) | 1199 |
| AcsI | RAATTY | 5 cut(s) | 515, 577, 704, 1022, 1332 |
| AcuI | CTGAAG | 3 cut(s) | 371, 1590, 2292 |
| AfaI | GTAC | 5 cut(s) | 753, 786, 1005, 2235, 2241 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 391, 868, 988, 1667, 1867, 2254 |
| AflII | CTTAAG | 1 cut(s) | 1702 |
| AflIII | ACRYGT | 1 cut(s) | 748 |
| AjnI | CCWGG | 3 cut(s) | 438, 1505, 1826 |
| AleI | CACNNNNGTG | 1 cut(s) | 1994 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1840, 1872 |
| Alw21I | GWGCWC | 2 cut(s) | 1101, 1372 |
| Alw26I | GTCTC | 3 cut(s) | 205, 311, 726 |
| AlwI | GGATC | 6 cut(s) | 21, 300, 937, 1160, 1955, 1968 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2248 |
| Ama87I | CYCGRG | 1 cut(s) | 723 |
| Aor13HI | TCCGGA | 1 cut(s) | 29 |
| AoxI | GGCC | 4 cut(s) | 190, 303, 1199, 1309 |
| ApoI | RAATTY | 5 cut(s) | 515, 577, 704, 1022, 1332 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 252, 2100 |
| AspA2I | CCTAGG | 1 cut(s) | 1270 |
| AspLEI | GCGC | 3 cut(s) | 82, 163, 363 |
| AspS9I | GGNCC | 1 cut(s) | 1824 |
| AsuC2I | CCSGG | 1 cut(s) | 15 |
| AsuHPI | GGTGA | 3 cut(s) | 1286, 2117, 2259 |
| AvaI | CYCGRG | 1 cut(s) | 723 |
| AvaII | GGWCC | 1 cut(s) | 1824 |
| AvrII | CCTAGG | 1 cut(s) | 1270 |
| BamHI | GGATCC | 1 cut(s) | 1960 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2217, 2249 |
| Bbv12I | GWGCWC | 2 cut(s) | 1101, 1372 |
| BccI | CCATC | 5 cut(s) | 349, 371, 1054, 1132, 1661 |
| BceAI | ACGGC | 7 cut(s) | 67, 113, 205, 236, 1214, 1802, 2284 |
| BciT130I | CCWGG | 3 cut(s) | 440, 1507, 1828 |
| BciVI | GTATCC | 2 cut(s) | 392, 1521 |
| BcnI | CCSGG | 1 cut(s) | 15 |
| BcoDI | GTCTC | 3 cut(s) | 205, 311, 726 |
| BfaI | CTAG | 6 cut(s) | 407, 1056, 1271, 1520, 1632, 1952 |
| BfmI | CTRYAG | 4 cut(s) | 431, 716, 2168, 2339 |
| BfrI | CTTAAG | 1 cut(s) | 1702 |
| BfuAI | ACCTGC | 2 cut(s) | 382, 1072 |
| BfuI | GTATCC | 2 cut(s) | 392, 1521 |
| BglII | AGATCT | 1 cut(s) | 1058 |
| BlnI | CCTAGG | 1 cut(s) | 1270 |
| Bme1390I | CCNGG | 4 cut(s) | 15, 440, 1507, 1828 |
| Bme18I | GGWCC | 1 cut(s) | 1824 |
| BmeT110I | CYCGRG | 1 cut(s) | 723 |
| BmgT120I | GGNCC | 1 cut(s) | 1824 |
| BmiI | GGNNCC | 2 cut(s) | 1155, 1962 |
| BmrFI | CCNGG | 4 cut(s) | 15, 440, 1507, 1828 |
| BmrI | ACTGGG | 1 cut(s) | 76 |
| BmsI | GCATC | 8 cut(s) | 68, 463, 854, 929, 1699, 1789, 1873, 2286 |
| BmuI | ACTGGG | 1 cut(s) | 76 |
| BpmI | CTGGAG | 5 cut(s) | 920, 1346, 1796, 1919, 2064 |
| BpuEI | CTTGAG | 1 cut(s) | 1115 |
| BpuMI | CCSGG | 1 cut(s) | 15 |
| BsaJI | CCNNGG | 6 cut(s) | 42, 207, 729, 987, 1270, 1983 |
| BsaWI | WCCGGW | 1 cut(s) | 29 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1840, 1870 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 391, 868, 988, 1667, 1867, 2254 |
| Bse1I | ACTGG | 7 cut(s) | 71, 687, 893, 1329, 1585, 1826, 1902 |
| Bse3DI | GCAATG | 3 cut(s) | 1040, 1641, 2013 |
| BseAI | TCCGGA | 1 cut(s) | 29 |
| BseBI | CCWGG | 3 cut(s) | 440, 1507, 1828 |
| BseDI | CCNNGG | 6 cut(s) | 42, 207, 729, 987, 1270, 1983 |
| BseGI | GGATG | 3 cut(s) | 403, 1070, 1672 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 391, 868, 988, 1667, 1867, 2254 |
| BseMI | GCAATG | 3 cut(s) | 1040, 1641, 2013 |
| BseMII | CTCAG | 4 cut(s) | 794, 822, 953, 2250 |
| BseNI | ACTGG | 7 cut(s) | 71, 687, 893, 1329, 1585, 1826, 1902 |
| BseRI | GAGGAG | 2 cut(s) | 338, 1940 |
| Bsh1236I | CGCG | 1 cut(s) | 80 |
| Bsh1285I | CGRYCG | 2 cut(s) | 143, 484 |
| BshFI | GGCC | 4 cut(s) | 192, 305, 1201, 1311 |
| BsiEI | CGRYCG | 2 cut(s) | 143, 484 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1101, 1372 |
| BsiHKCI | CYCGRG | 1 cut(s) | 723 |
| BsiSI | CCGG | 2 cut(s) | 15, 30 |
| BslFI | GGGAC | 1 cut(s) | 2230 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 391, 868, 988, 1667, 1867, 2254 |
| BsmAI | GTCTC | 3 cut(s) | 205, 311, 726 |
| BsmFI | GGGAC | 1 cut(s) | 2230 |
| BsnI | GGCC | 4 cut(s) | 192, 305, 1201, 1311 |
| BsoBI | CYCGRG | 1 cut(s) | 723 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1101, 1372 |
| Bsp13I | TCCGGA | 1 cut(s) | 29 |
| Bsp1407I | TGTACA | 1 cut(s) | 2233 |
| Bsp143I | GATC | 9 cut(s) | 26, 166, 292, 942, 1058, 1165, 1652, 1960, 2062 |
| BspACI | CCGC | 7 cut(s) | 104, 149, 532, 671, 1131, 1291, 1789 |
| BspANI | GGCC | 4 cut(s) | 192, 305, 1201, 1311 |
| BspCNI | CTCAG | 4 cut(s) | 793, 823, 952, 2251 |
| BspEI | TCCGGA | 1 cut(s) | 29 |
| BspFNI | CGCG | 1 cut(s) | 80 |
| BspHI | TCATGA | 3 cut(s) | 469, 1213, 1348 |
| BspLI | GGNNCC | 2 cut(s) | 1155, 1962 |
| BspMAI | CTGCAG | 3 cut(s) | 435, 720, 2172 |
| BspMI | ACCTGC | 2 cut(s) | 382, 1072 |
| BspPI | GGATC | 6 cut(s) | 21, 300, 937, 1160, 1955, 1968 |
| BspQI | GCTCTTC | 1 cut(s) | 1682 |
| BspTI | CTTAAG | 1 cut(s) | 1702 |
| BsrDI | GCAATG | 3 cut(s) | 1040, 1641, 2013 |
| BsrGI | TGTACA | 1 cut(s) | 2233 |
| BsrI | ACTGG | 7 cut(s) | 71, 687, 893, 1329, 1585, 1826, 1902 |
| BssECI | CCNNGG | 6 cut(s) | 42, 207, 729, 987, 1270, 1983 |
| BssMI | GATC | 9 cut(s) | 26, 166, 292, 942, 1058, 1165, 1652, 1960, 2062 |
| BssT1I | CCWWGG | 6 cut(s) | 42, 207, 729, 987, 1270, 1983 |
| Bst2UI | CCWGG | 3 cut(s) | 440, 1507, 1828 |
| Bst4CI | ACNGT | 5 cut(s) | 144, 489, 1281, 2244, 2340 |
| Bst6I | CTCTTC | 3 cut(s) | 471, 1643, 1682 |
| BstAFI | CTTAAG | 1 cut(s) | 1702 |
| BstAUI | TGTACA | 1 cut(s) | 2233 |
| BstC8I | GCNNGC | 3 cut(s) | 478, 1309, 1842 |
| BstDEI | CTNAG | 7 cut(s) | 780, 831, 939, 1561, 1796, 1947, 2259 |
| BstEII | GGTNACC | 1 cut(s) | 2110 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 389, 2252 |
| BstF5I | GGATG | 3 cut(s) | 403, 1070, 1672 |
| BstFNI | CGCG | 1 cut(s) | 80 |
| BstHHI | GCGC | 3 cut(s) | 82, 163, 363 |
| BstKTI | GATC | 9 cut(s) | 29, 169, 295, 945, 1061, 1168, 1655, 1963, 2065 |
| BstMAI | GTCTC | 3 cut(s) | 205, 311, 726 |
| BstMBI | GATC | 9 cut(s) | 26, 166, 292, 942, 1058, 1165, 1652, 1960, 2062 |
| BstMCI | CGRYCG | 2 cut(s) | 143, 484 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 110, 145, 222, 248, 810, 978, 1786, 2167 |
| BstNI | CCWGG | 3 cut(s) | 440, 1507, 1828 |
| BstNSI | RCATGY | 1 cut(s) | 752 |
| BstPI | GGTNACC | 1 cut(s) | 2110 |
| BstSCI | CCNGG | 4 cut(s) | 13, 438, 1505, 1826 |
| BstSFI | CTRYAG | 4 cut(s) | 431, 716, 2168, 2339 |
| BstUI | CGCG | 1 cut(s) | 80 |
| BstX2I | RGATCY | 6 cut(s) | 26, 292, 942, 1058, 1165, 1960 |
| BstYI | RGATCY | 6 cut(s) | 26, 292, 942, 1058, 1165, 1960 |
| BsuI | GTATCC | 2 cut(s) | 392, 1521 |
| BsuRI | GGCC | 4 cut(s) | 192, 305, 1201, 1311 |
| BtgZI | GCGATG | 1 cut(s) | 1641 |
| BtsCI | GGATG | 3 cut(s) | 403, 1070, 1672 |
| BtsI | GCAGTG | 2 cut(s) | 811, 2115 |
| BtsIMutI | CAGTG | 7 cut(s) | 64, 694, 811, 900, 1322, 1578, 2115 |
| BveI | ACCTGC | 2 cut(s) | 382, 1072 |
| Cac8I | GCNNGC | 3 cut(s) | 478, 1309, 1842 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2248 |
| CciI | TCATGA | 3 cut(s) | 469, 1213, 1348 |
| CfoI | GCGC | 3 cut(s) | 82, 163, 363 |
| Cfr13I | GGNCC | 1 cut(s) | 1824 |
| CsiI | ACCWGGT | 1 cut(s) | 1505 |
| Csp6I | GTAC | 5 cut(s) | 752, 785, 1004, 2234, 2240 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2202, 2237 |
| CviAII | CATG | 7 cut(s) | 470, 595, 736, 749, 1214, 1349, 2231 |
| CviQI | GTAC | 5 cut(s) | 752, 785, 1004, 2234, 2240 |
| DdeI | CTNAG | 7 cut(s) | 780, 831, 939, 1561, 1796, 1947, 2259 |
| DpnI | GATC | 9 cut(s) | 28, 168, 294, 944, 1060, 1167, 1654, 1962, 2064 |
| DpnII | GATC | 9 cut(s) | 26, 166, 292, 942, 1058, 1165, 1652, 1960, 2062 |
| EaeI | YGGCCR | 1 cut(s) | 1199 |
| Eam1104I | CTCTTC | 3 cut(s) | 471, 1643, 1682 |
| EarI | CTCTTC | 3 cut(s) | 471, 1643, 1682 |
| EciI | GGCGGA | 2 cut(s) | 1306, 1804 |
| Eco130I | CCWWGG | 6 cut(s) | 42, 207, 729, 987, 1270, 1983 |
| Eco47I | GGWCC | 1 cut(s) | 1824 |
| Eco57I | CTGAAG | 3 cut(s) | 371, 1590, 2292 |
| Eco88I | CYCGRG | 1 cut(s) | 723 |
| Eco91I | GGTNACC | 1 cut(s) | 2110 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 389, 2252 |
| EcoO65I | GGTNACC | 1 cut(s) | 2110 |
| EcoRI | GAATTC | 1 cut(s) | 1332 |
| EcoRII | CCWGG | 3 cut(s) | 438, 1505, 1826 |
| EcoT14I | CCWWGG | 6 cut(s) | 42, 207, 729, 987, 1270, 1983 |
| ErhI | CCWWGG | 6 cut(s) | 42, 207, 729, 987, 1270, 1983 |
| FaeI | CATG | 7 cut(s) | 473, 598, 739, 752, 1217, 1352, 2234 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 240, 272, 2310, 2342 |
| FaqI | GGGAC | 1 cut(s) | 2230 |
| FatI | CATG | 7 cut(s) | 469, 594, 735, 748, 1213, 1348, 2230 |
| FblI | GTMKAC | 2 cut(s) | 345, 1175 |
| FokI | GGATG | 3 cut(s) | 410, 1077, 1679 |
| FspBI | CTAG | 6 cut(s) | 407, 1056, 1271, 1520, 1632, 1952 |
| GlaI | GCGC | 3 cut(s) | 81, 162, 362 |
| GsuI | CTGGAG | 5 cut(s) | 920, 1346, 1796, 1919, 2064 |
| HaeIII | GGCC | 4 cut(s) | 192, 305, 1201, 1311 |
| HapII | CCGG | 2 cut(s) | 15, 30 |
| HhaI | GCGC | 3 cut(s) | 82, 163, 363 |
| Hin1II | CATG | 7 cut(s) | 473, 598, 739, 752, 1217, 1352, 2234 |
| Hin6I | GCGC | 3 cut(s) | 80, 161, 361 |
| HinP1I | GCGC | 3 cut(s) | 80, 161, 361 |
| HincII | GTYRAC | 2 cut(s) | 87, 1359 |
| HindII | GTYRAC | 2 cut(s) | 87, 1359 |
| HindIII | AAGCTT | 4 cut(s) | 819, 1205, 2067, 2159 |
| HinfI | GANTC | 9 cut(s) | 171, 268, 299, 683, 739, 1229, 1298, 1792, 2023 |
| HpaI | GTTAAC | 1 cut(s) | 87 |
| HpaII | CCGG | 2 cut(s) | 15, 30 |
| HphI | GGTGA | 3 cut(s) | 1286, 2117, 2259 |
| Hpy166II | GTNNAC | 9 cut(s) | 87, 288, 346, 694, 746, 1176, 1277, 1359, 1637 |
| Hpy8I | GTNNAC | 9 cut(s) | 87, 288, 346, 694, 746, 1176, 1277, 1359, 1637 |
| Hpy99I | CGWCG | 1 cut(s) | 134 |
| HpyAV | CCTTC | 2 cut(s) | 395, 1885 |
| HpyCH4III | ACNGT | 5 cut(s) | 144, 489, 1281, 2244, 2340 |
| HpyCH4IV | ACGT | 1 cut(s) | 1315 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 110, 145, 222, 248, 810, 978, 1786, 2167 |
| HpyF3I | CTNAG | 7 cut(s) | 780, 831, 939, 1561, 1796, 1947, 2259 |
| HpySE526I | ACGT | 1 cut(s) | 1315 |
| Hsp92II | CATG | 7 cut(s) | 473, 598, 739, 752, 1217, 1352, 2234 |
| HspAI | GCGC | 3 cut(s) | 80, 161, 361 |
| Kpn2I | TCCGGA | 1 cut(s) | 29 |
| KspAI | GTTAAC | 1 cut(s) | 87 |
| Kzo9I | GATC | 9 cut(s) | 26, 166, 292, 942, 1058, 1165, 1652, 1960, 2062 |
| LguI | GCTCTTC | 1 cut(s) | 1682 |
| LmnI | GCTCC | 7 cut(s) | 32, 91, 178, 358, 1159, 1753, 1777 |
| LweI | GCATC | 8 cut(s) | 68, 463, 854, 929, 1699, 1789, 1873, 2286 |
| MabI | ACCWGGT | 1 cut(s) | 1505 |
| MaeI | CTAG | 6 cut(s) | 407, 1056, 1271, 1520, 1632, 1952 |
| MaeII | ACGT | 1 cut(s) | 1315 |
| MaeIII | GTNAC | 7 cut(s) | 956, 1741, 1942, 1978, 1987, 2110, 2143 |
| MalI | GATC | 9 cut(s) | 28, 168, 294, 944, 1060, 1167, 1654, 1962, 2064 |
| MboI | GATC | 9 cut(s) | 26, 166, 292, 942, 1058, 1165, 1652, 1960, 2062 |
| MboII | GAAGA | 9 cut(s) | 458, 768, 1119, 1430, 1660, 1669, 1685, 1723, 2285 |
| MflI | RGATCY | 6 cut(s) | 26, 292, 942, 1058, 1165, 1960 |
| MhlI | GDGCHC | 2 cut(s) | 1101, 1372 |
| MroI | TCCGGA | 1 cut(s) | 29 |
| MroXI | GAANNNNTTC | 2 cut(s) | 252, 2100 |
| MseI | TTAA | 7 cut(s) | 86, 417, 765, 888, 1283, 1500, 1703 |
| MslI | CAYNNNNRTG | 3 cut(s) | 353, 1383, 1994 |
| MspA1I | CMGCKG | 1 cut(s) | 1994 |
| MspCI | CTTAAG | 1 cut(s) | 1702 |
| MspI | CCGG | 2 cut(s) | 15, 30 |
| MspR9I | CCNGG | 4 cut(s) | 15, 440, 1507, 1828 |
| MvaI | CCWGG | 3 cut(s) | 440, 1507, 1828 |
| MvnI | CGCG | 1 cut(s) | 80 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 110, 145, 222, 248, 810, 978, 1786, 2167 |
| NciI | CCSGG | 1 cut(s) | 15 |
| NdeII | GATC | 9 cut(s) | 26, 166, 292, 942, 1058, 1165, 1652, 1960, 2062 |
| NlaIII | CATG | 7 cut(s) | 473, 598, 739, 752, 1217, 1352, 2234 |
| NlaIV | GGNNCC | 2 cut(s) | 1155, 1962 |
| NmuCI | GTSAC | 3 cut(s) | 956, 1942, 1987 |
| NspI | RCATGY | 1 cut(s) | 752 |
| OliI | CACNNNNGTG | 1 cut(s) | 1994 |
| PaeR7I | CTCGAG | 1 cut(s) | 723 |
| PagI | TCATGA | 3 cut(s) | 469, 1213, 1348 |
| PaqCI | CACCTGC | 1 cut(s) | 382 |
| PciI | ACATGT | 1 cut(s) | 748 |
| PciSI | GCTCTTC | 1 cut(s) | 1682 |
| PdmI | GAANNNNTTC | 2 cut(s) | 252, 2100 |
| PfeI | GAWTC | 9 cut(s) | 171, 268, 299, 683, 739, 1229, 1298, 1792, 2023 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1667 |
| PfoI | TCCNGGA | 1 cut(s) | 1826 |
| PscI | ACATGT | 1 cut(s) | 748 |
| Psp6I | CCWGG | 3 cut(s) | 438, 1505, 1826 |
| PspEI | GGTNACC | 1 cut(s) | 2110 |
| PspGI | CCWGG | 3 cut(s) | 438, 1505, 1826 |
| PspN4I | GGNNCC | 2 cut(s) | 1155, 1962 |
| PspPI | GGNCC | 1 cut(s) | 1824 |
| PstI | CTGCAG | 3 cut(s) | 435, 720, 2172 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2248 |
| PsuI | RGATCY | 6 cut(s) | 26, 292, 942, 1058, 1165, 1960 |
| PvuII | CAGCTG | 1 cut(s) | 1994 |
| RsaI | GTAC | 5 cut(s) | 753, 786, 1005, 2235, 2241 |
| RsaNI | GTAC | 5 cut(s) | 752, 785, 1004, 2234, 2240 |
| RseI | CAYNNNNRTG | 3 cut(s) | 353, 1383, 1994 |
| SapI | GCTCTTC | 1 cut(s) | 1682 |
| SaqAI | TTAA | 7 cut(s) | 86, 417, 765, 888, 1283, 1500, 1703 |
| Sau3AI | GATC | 9 cut(s) | 26, 166, 292, 942, 1058, 1165, 1652, 1960, 2062 |
| Sau96I | GGNCC | 1 cut(s) | 1824 |
| ScrFI | CCNGG | 4 cut(s) | 15, 440, 1507, 1828 |
| SduI | GDGCHC | 2 cut(s) | 1101, 1372 |
| SexAI | ACCWGGT | 1 cut(s) | 1505 |
| SfaNI | GCATC | 8 cut(s) | 68, 463, 854, 929, 1699, 1789, 1873, 2286 |
| SfcI | CTRYAG | 4 cut(s) | 431, 716, 2168, 2339 |
| Sfr274I | CTCGAG | 1 cut(s) | 723 |
| SinI | GGWCC | 1 cut(s) | 1824 |
| SlaI | CTCGAG | 1 cut(s) | 723 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 353, 1383, 1994 |
| SmlI | CTYRAG | 3 cut(s) | 723, 1094, 1702 |
| SmoI | CTYRAG | 3 cut(s) | 723, 1094, 1702 |
| SsiI | CCGC | 7 cut(s) | 104, 149, 532, 671, 1131, 1291, 1789 |
| SspI | AATATT | 3 cut(s) | 568, 1225, 2218 |
| SspMI | CTAG | 6 cut(s) | 407, 1056, 1271, 1520, 1632, 1952 |
| StyD4I | CCNGG | 4 cut(s) | 13, 438, 1505, 1826 |
| StyI | CCWWGG | 6 cut(s) | 42, 207, 729, 987, 1270, 1983 |
| TaaI | ACNGT | 5 cut(s) | 144, 489, 1281, 2244, 2340 |
| TaiI | ACGT | 1 cut(s) | 1318 |
| TaqI | TCGA | 5 cut(s) | 169, 724, 1372, 1602, 1725 |
| TaqII | GACCGA | 2 cut(s) | 498, 1930 |
| TatI | WGTACW | 4 cut(s) | 751, 1003, 2233, 2239 |
| TauI | GCSGC | 2 cut(s) | 107, 151 |
| TfiI | GAWTC | 9 cut(s) | 171, 268, 299, 683, 739, 1229, 1298, 1792, 2023 |
| Tru1I | TTAA | 7 cut(s) | 86, 417, 765, 888, 1283, 1500, 1703 |
| Tru9I | TTAA | 7 cut(s) | 86, 417, 765, 888, 1283, 1500, 1703 |
| TscAI | CASTG | 7 cut(s) | 71, 694, 811, 900, 1329, 1585, 2122 |
| TseFI | GTSAC | 3 cut(s) | 956, 1942, 1987 |
| Tsp45I | GTSAC | 3 cut(s) | 956, 1942, 1987 |
| TspGWI | ACGGA | 5 cut(s) | 104, 305, 851, 1355, 2200 |
| TspRI | CASTG | 7 cut(s) | 71, 694, 811, 900, 1329, 1585, 2122 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1667 |
| Vha464I | CTTAAG | 1 cut(s) | 1702 |
| VpaK11BI | GGWCC | 1 cut(s) | 1824 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 389, 2252 |
| XapI | RAATTY | 5 cut(s) | 515, 577, 704, 1022, 1332 |
| XbaI | TCTAGA | 2 cut(s) | 406, 1519 |
| XceI | RCATGY | 1 cut(s) | 752 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1894 |
| XhoI | CTCGAG | 1 cut(s) | 723 |
| XmaJI | CCTAGG | 1 cut(s) | 1270 |
| XmiI | GTMKAC | 2 cut(s) | 345, 1175 |
| XmnI | GAANNNNTTC | 2 cut(s) | 252, 2100 |
| XspI | CTAG | 6 cut(s) | 407, 1056, 1271, 1520, 1632, 1952 |