Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g21160 FvH4_5g21160 |
| malus_domestica | MD06G1040600.v1.1 |
| prunus_persica | Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 Prupe.5G046800_v2.0.a1 |
| pyrus_communis | pycom06g03380 |
| rosa_chinensis | RchiOBHm_Chr1g0379241 RchiOBHm_Chr7g0208291 RchiOBHm_Chr7g0235341 |
| rosa_laevigata | RLG00000003230 RLG00000003232 |
| rosa_multiflora | Rmu_co7962606.1_g000001 Rmu_sc0040203.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00101090 Rroxscaffold_2G00122260 Rroxscaffold_3G00250610 Rroxscaffold_5G00350460 Rroxscaffold_5G00361300 |
| rosa_rugosa | Rorug02G0101400 Rorug02G0101500 Rorug02G0101600 Rorug07G0102700.1 Rorug07G0103000 |
| rosa_samantha | Rh4DG103100 Rh5DG324000 Rh7AG237100 Rh7AG237300 Rh7AG445100 Rh7BG232600 Rh7BG232800 Rh7DG243100 Rh7DG243300 |
| rosa_wichuraiana | Rw7G020230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AgsI | TTSAA | 1 cut(s) | 288 |
| AjnI | CCWGG | 1 cut(s) | 117 |
| AluBI | AGCT | 1 cut(s) | 124 |
| AluI | AGCT | 1 cut(s) | 124 |
| Alw21I | GWGCWC | 1 cut(s) | 126 |
| AoxI | GGCC | 1 cut(s) | 114 |
| AspS9I | GGNCC | 1 cut(s) | 115 |
| BanII | GRGCYC | 1 cut(s) | 126 |
| Bbv12I | GWGCWC | 1 cut(s) | 126 |
| BccI | CCATC | 2 cut(s) | 106, 170 |
| BciT130I | CCWGG | 1 cut(s) | 119 |
| Bme1390I | CCNGG | 1 cut(s) | 119 |
| BmgT120I | GGNCC | 1 cut(s) | 115 |
| BmrFI | CCNGG | 1 cut(s) | 119 |
| BmsI | GCATC | 1 cut(s) | 177 |
| BsaJI | CCNNGG | 2 cut(s) | 117, 216 |
| BseBI | CCWGG | 1 cut(s) | 119 |
| BseDI | CCNNGG | 2 cut(s) | 117, 216 |
| BseYI | CCCAGC | 1 cut(s) | 200 |
| BshFI | GGCC | 1 cut(s) | 116 |
| BsiHKAI | GWGCWC | 1 cut(s) | 126 |
| BsmI | GAATGC | 1 cut(s) | 20 |
| BsnI | GGCC | 1 cut(s) | 116 |
| Bsp1286I | GDGCHC | 1 cut(s) | 126 |
| Bsp143I | GATC | 1 cut(s) | 75 |
| BspANI | GGCC | 1 cut(s) | 116 |
| BssECI | CCNNGG | 2 cut(s) | 117, 216 |
| BssMI | GATC | 1 cut(s) | 75 |
| BssT1I | CCWWGG | 1 cut(s) | 216 |
| Bst2UI | CCWGG | 1 cut(s) | 119 |
| Bst4CI | ACNGT | 2 cut(s) | 11, 44 |
| BstKTI | GATC | 1 cut(s) | 78 |
| BstMBI | GATC | 1 cut(s) | 75 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 113 |
| BstNI | CCWGG | 1 cut(s) | 119 |
| BstSCI | CCNGG | 1 cut(s) | 117 |
| BsuRI | GGCC | 1 cut(s) | 116 |
| BtsIMutI | CAGTG | 1 cut(s) | 16 |
| Cfr13I | GGNCC | 1 cut(s) | 115 |
| CviJI | RGCY | 2 cut(s) | 116, 124 |
| CviKI_1 | RGCY | 2 cut(s) | 116, 124 |
| DpnI | GATC | 1 cut(s) | 77 |
| DpnII | GATC | 1 cut(s) | 75 |
| Ecl136II | GAGCTC | 1 cut(s) | 124 |
| Eco130I | CCWWGG | 1 cut(s) | 216 |
| Eco24I | GRGCYC | 1 cut(s) | 126 |
| Eco53kI | GAGCTC | 1 cut(s) | 124 |
| EcoICRI | GAGCTC | 1 cut(s) | 124 |
| EcoRII | CCWGG | 1 cut(s) | 117 |
| EcoT14I | CCWWGG | 1 cut(s) | 216 |
| EcoT38I | GRGCYC | 1 cut(s) | 126 |
| ErhI | CCWWGG | 1 cut(s) | 216 |
| FaiI | YATR | 2 cut(s) | 233, 271 |
| FriOI | GRGCYC | 1 cut(s) | 126 |
| GsaI | CCCAGC | 1 cut(s) | 204 |
| HaeIII | GGCC | 1 cut(s) | 116 |
| HinfI | GANTC | 3 cut(s) | 4, 136, 196 |
| Hpy99I | CGWCG | 1 cut(s) | 38 |
| HpyAV | CCTTC | 1 cut(s) | 101 |
| HpyCH4III | ACNGT | 2 cut(s) | 11, 44 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 113 |
| Kzo9I | GATC | 1 cut(s) | 75 |
| LmnI | GCTCC | 1 cut(s) | 121 |
| LpnPI | CCDG | 5 cut(s) | 104, 131, 204, 214, 236 |
| LweI | GCATC | 1 cut(s) | 177 |
| MalI | GATC | 1 cut(s) | 77 |
| MboI | GATC | 1 cut(s) | 75 |
| MboII | GAAGA | 1 cut(s) | 185 |
| MfeI | CAATTG | 1 cut(s) | 288 |
| MhlI | GDGCHC | 1 cut(s) | 126 |
| MluCI | AATT | 2 cut(s) | 241, 288 |
| MnlI | CCTC | 1 cut(s) | 97 |
| MseI | TTAA | 3 cut(s) | 84, 168, 240 |
| MspR9I | CCNGG | 1 cut(s) | 119 |
| MunI | CAATTG | 1 cut(s) | 288 |
| Mva1269I | GAATGC | 1 cut(s) | 20 |
| MvaI | CCWGG | 1 cut(s) | 119 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 113 |
| NdeII | GATC | 1 cut(s) | 75 |
| PctI | GAATGC | 1 cut(s) | 20 |
| PfeI | GAWTC | 3 cut(s) | 4, 136, 196 |
| Psp124BI | GAGCTC | 1 cut(s) | 126 |
| Psp6I | CCWGG | 1 cut(s) | 117 |
| PspFI | CCCAGC | 1 cut(s) | 200 |
| PspGI | CCWGG | 1 cut(s) | 117 |
| PspPI | GGNCC | 1 cut(s) | 115 |
| SacI | GAGCTC | 1 cut(s) | 126 |
| SaqAI | TTAA | 3 cut(s) | 84, 168, 240 |
| Sau3AI | GATC | 1 cut(s) | 75 |
| Sau96I | GGNCC | 1 cut(s) | 115 |
| ScrFI | CCNGG | 1 cut(s) | 119 |
| SduI | GDGCHC | 1 cut(s) | 126 |
| SetI | ASST | 4 cut(s) | 93, 126, 218, 255 |
| SfaNI | GCATC | 1 cut(s) | 177 |
| Sse9I | AATT | 2 cut(s) | 241, 288 |
| SspI | AATATT | 1 cut(s) | 58 |
| SstI | GAGCTC | 1 cut(s) | 126 |
| StyD4I | CCNGG | 1 cut(s) | 117 |
| StyI | CCWWGG | 1 cut(s) | 216 |
| TaaI | ACNGT | 2 cut(s) | 11, 44 |
| TaqI | TCGA | 2 cut(s) | 126, 185 |
| TasI | AATT | 2 cut(s) | 241, 288 |
| TfiI | GAWTC | 3 cut(s) | 4, 136, 196 |
| Tru1I | TTAA | 3 cut(s) | 84, 168, 240 |
| Tru9I | TTAA | 3 cut(s) | 84, 168, 240 |
| TscAI | CASTG | 1 cut(s) | 16 |
| TspDTI | ATGAA | 2 cut(s) | 37, 220 |
| TspRI | CASTG | 1 cut(s) | 16 |