Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0003250

Physical Location & Seq

Genomic Coordinates Reverse (-)

17526767 .. 17529971

Gene Structure 3205 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g12400.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGGCCACACAATCTGAACGCCTTGGATATGAATTTGCAAAGTGGCTTGGAGTTCGAACTCCTCAGGTAGTACATTGTCACTCAACTCTCTCCTGCGATAATATCATATCTACCATAATACATATATGCTTTGTCTGTTGGATATTGCAGGCCAGAGTCATTCATAATTGTAGCTTGGAGTGGCTGCAGATGAAGGAAGCTGCAGAGAAAGCAAGAGATGCAGCAAGTTTAGAAGGAGATGAATGTGGGGAAATGACGTGCTCAGAACTTTTGGAAGCTCTTGAACTTAGCCGGTGCCTTTTGCTCATAAGGTCTAACTATAATCATAGTGGATCTCCTTTACTTGAAAGCCCAACTGTATTTGAGTCGAGGGAAACTGCAGAAAAAACAGCGGCTGCTCTTGGTAGGATCTTGATGTTGGATCTTGTCATCAGAAATGAGGATAGGCTTCCTTGCCATAAGCTCAGATGGCGTGGAAATTCCGCAAATCTATTGTTGGCTGATAAAATGGCTTTGGGAAATATGGATAGATTGGAGGAAGCCTTCGATTGTGCAATCAAGCGATACAAACCAAGAGTAATCAGAGGTCTTCATAAGGATAGAAGGGCAACTTCAGTAGATAGCAAATTGGGTACTCATAATGCCGTAACAGTAACACAGACCTCTGATCTTTCAGATATTATAGAGTCACCAAGATCTATACAGAGTGAACTATCAGATCATTCAGTGTTTTCTGATTTTCCAGTTGTGGCTATTGACTCTGGGGTTCCTCGTCGACCTCCTGCTGGAAAGCGCGCAAATGATCAGGAAATTTATCCCAGGTTGGTTGAGTTACTACTGAACAGTTCTGAGTACTCCTCTAATGTGTTGCATGAAATAACATTAGGGAAGTTAGGACGTTCTACCATACAAGAAACTGATGCATCTGATATACCAGCGTATGAGATGGCTTCAGTTGTTAAAAAATTTCGTAGTGGATTCCGAGCTGCTCTTAGGGATCTGCAGGGATTCCATATATTCTTACTCACACTTCATCAAAGACTGGAGAACTTGTTACGAATATTCTTCAATATTATAGATAGAATATCCTCAGGGGAGTCCGACAAAGAGGATTTGGCAGTTCCTGAGTCTCCCTCTCATGCTGCTGGAAGTGTTCATTGTGCTTCTGCACCAAGTAAGGAACGACTTGTCAATGAGAACAATCCTGATTTTAGTGATTCCGAGTCACAGAGAACTGCTCTAAGGTCTTCGTCTTCTGGAAATAAAGAAGGCTATGACTGCAGCTCTCCCATGTCAAGGGATAGTTGGCATGGGAGGTTCTCTAAAGGAAGTGCGGAGCCCCTCAGTAGTCTACGTTTGACAGCAAAGCTTCGGGACTTTCATAAATACGCCAAGGTTGATGCTGAATCAAACAAAGAACTGGAACAGTGGAATGAAATGCTAAAGAGTGATGCTATCAAACTATGTCAAGAGAACAATTTTAATTCTGGGTTTTTTGAGGGCAGTGACAACAATGGTGTTGTTGATGCTTATGAATTGAAGGTCAGACTTGAGCACATTCTTGAGAGGATTGCATTGATATCGGAGGCTGCAAATACAGAGAGGCCATCTCGAGTCACAAGTTGCATGTTCATCGGTGGAGCCTTGGCTGCACGATCTGTATTCACGCTGCAACGCTTAGGAATTACTCATGTATTGTGTTTGTGCTCCAATGAAATTGGACAAGCAGATTCTCAGTTTCCTATCGATCTATTCGAGTACAAGAATTTTGCTGTAAGGATATGCGACAATGACGATACAAATATCAGCACCATCTTTGATGAAGCTATCAGTTTTACTGATCGTGTTGAACAAGAAAGAGGGAAAGTTCTTGTCCATTGCTTCGAGGGGAAAAGTAGAAGTGCCACCCTAGTGCTTGCATACCTAATGCTGAGAAAGAATTGCACTCTATTAGAGGCGTGGAATTCTCTAAAACAAGTTCATCGTCGGGCGCAGCCCAATGATGGTTTTGCAAAGATCCTAGTGGATCTGGATAAGAAACTTCATGGGAGAGTTTCCATGGAGTGGCAACAGCGGAAGCCTACGATGAAAGTTTGCCCCATCTGCGGGGTAAATGCAGGTCTGAGTAGCAGCTCGCTTAAGCTTCATCTGCAGAAATCACACAAGAAGCTATCGTCAGGTAGTGTCGATAGTGCAATGACAATGGAGATACAAAAGGCCTTGACAGCGCTAAAAATTAGCCGAGGCGGAAGCATCATCCCTAAACAGAGGTCTCATTCAGATGTGGAAGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0001101 GO:0003674 GO:0003824 GO:0004721 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006464 GO:0006470 GO:0006793 GO:0006796 GO:0006807 GO:0006996 GO:0007010 GO:0007017 GO:0008138 GO:0008150 GO:0008152 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010119 GO:0010468 GO:0016043 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0019222 GO:0019538 GO:0030865 GO:0031122 GO:0033993 GO:0036211 GO:0042221 GO:0042578 GO:0043170 GO:0043412 GO:0043622 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0050789 GO:0050794 GO:0050896 GO:0060255 GO:0065007 GO:0071704 GO:0071840 GO:0097305 GO:0097435 GO:0140096 GO:1901564 GO:1901700

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Act-Frag_cataly DSPc

Protein Analysis

765

Amino Acids

85.36

Weight (kDa)

6.68

Isoelectric Point (pI)

51.24

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0003250)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G23720 AT5G23720 AT5G23720
fragaria_vesca	FvH4_5g09220 FvH4_5g09220 FvH4_5g09220 FvH4_5g09220 FvH4_5g09220 FvH4_5g09220 FvH4_5g09220 FvH4_5g09220 FvH4_5g09220
malus_domestica	MD06G1132400.v1.1 MD14G1148800.v1.1
prunus_persica	Prupe.5G143400_v2.0.a1
pyrus_communis	pycom06g12400 pycom14g12360
rosa_chinensis	RchiOBHm_Chr4g0416471 RchiOBHm_Chr7g0188941 RchiOBHm_Chr7g0194331
rosa_laevigata	RLG00000004049 RLG00000004648
rosa_multiflora	Rmu_co8071116.1_g000001 Rmu_sc0007831.1_g000001 Rmu_sc0032883.1_g000001 Rmu_ssc0000113.1_g000006
rosa_roxburghii	Rroxscaffold_3G00265920
rosa_rugosa	Rorug06G0494800 Rorug06G0494900 Rorug06G0495000
rosa_samantha	Rh7AG099700 Rh7BG101800 Rh7CG103100 Rh7CG146600 Rh7DG101600 Rh7DG144200
rosa_wichuraiana	Rw7G008590

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	2108
AccB1I	GGYRCC	1 cut(s)	294
AccB7I	CCANNNNNTGG	1 cut(s)	2064
AccI	GTMKAC	2 cut(s)	775, 1351
AccII	CGCG	1 cut(s)	795
AciI	CCGC	6 cut(s)	392, 483, 1334, 2074, 2106, 2247
AclWI	GGATC	6 cut(s)	340, 416, 429, 1005, 2011, 2034
AcoI	YGGCCR	1 cut(s)	3
AcsI	RAATTY	6 cut(s)	32, 478, 810, 965, 1765, 1963
AcuI	CTGAAG	2 cut(s)	597, 936
AfaI	GTAC	4 cut(s)	72, 634, 854, 1760
AfeI	AGCGCT	1 cut(s)	2229
AfiI	CCNNNNNNNGG	6 cut(s)	785, 1296, 2003, 2064, 2105, 2106
AflII	CTTAAG	1 cut(s)	2138
AgsI	TTSAA	5 cut(s)	284, 347, 1069, 1540, 1850
AjiI	CACGTC	1 cut(s)	258
AjnI	CCWGG	1 cut(s)	818
AleI	CACNNNNGTG	1 cut(s)	1910
Alw21I	GWGCWC	3 cut(s)	263, 1557, 1709
Alw26I	GTCTC	2 cut(s)	1134, 2277
AlwI	GGATC	6 cut(s)	340, 416, 429, 1005, 2011, 2034
AlwNI	CAGNNNCTG	2 cut(s)	395, 1124
Ama87I	CYCGRG	1 cut(s)	1611
Aor51HI	AGCGCT	1 cut(s)	2229
AoxI	GGCC	4 cut(s)	3, 150, 1604, 2217
ApoI	RAATTY	6 cut(s)	32, 478, 810, 965, 1765, 1963
AspLEI	GCGC	4 cut(s)	795, 797, 1993, 2230
AsuHPI	GGTGA	1 cut(s)	681
AsuII	TTCGAA	1 cut(s)	55
AvaI	CYCGRG	1 cut(s)	1611
AxyI	CCTNAGG	2 cut(s)	63, 1090
BalI	TGGCCA	1 cut(s)	5
BanI	GGYRCC	1 cut(s)	294
BanII	GRGCYC	1 cut(s)	1341
BbsI	GAAGAC	3 cut(s)	581, 1239, 1245
Bbv12I	GWGCWC	3 cut(s)	263, 1557, 1709
BccI	CCATC	6 cut(s)	462, 940, 1615, 1820, 1997, 2108
BceAI	ACGGC	1 cut(s)	629
BcgI	CGANNNNNNTGC	4 cut(s)	1563, 1597, 1615, 1649
BciT130I	CCWGG	1 cut(s)	820
BclI	TGATCA	1 cut(s)	802
BcoDI	GTCTC	2 cut(s)	1134, 2277
BfaI	CTAG	2 cut(s)	1910, 2021
BfmI	CTRYAG	6 cut(s)	185, 201, 378, 1001, 1279, 2150
BfoI	RGCGCY	1 cut(s)	2231
BfrI	CTTAAG	1 cut(s)	2138
BfuAI	ACCTGC	1 cut(s)	2108
BglII	AGATCT	1 cut(s)	695
BmcAI	AGTACT	1 cut(s)	854
Bme1390I	CCNGG	1 cut(s)	820
BmeT110I	CYCGRG	1 cut(s)	1611
BmgBI	CACGTC	1 cut(s)	258
BmiI	GGNNCC	4 cut(s)	296, 768, 1338, 1642
BmrFI	CCNGG	1 cut(s)	820
BmsI	GCATC	7 cut(s)	208, 910, 932, 1390, 1441, 1516, 2262
BpiI	GAAGAC	3 cut(s)	581, 1239, 1245
BplI	GAGNNNNNCTC	8 cut(s)	842, 874, 1118, 1150, 1222, 1254, 1594, 1626
BpmI	CTGGAG	1 cut(s)	1064
Bpu10I	CCTNAGC	1 cut(s)	1678
Bpu14I	TTCGAA	1 cut(s)	55
BpuEI	CTTGAG	2 cut(s)	1571, 1583
Bsa29I	ATCGAT	1 cut(s)	1746
BsaI	GGTCTC	1 cut(s)	2277
BsaJI	CCNNGG	6 cut(s)	22, 818, 1392, 1644, 2058, 2242
BsaXI	ACNNNNNCTCC	2 cut(s)	1037, 1067
Bsc4I	CCNNNNNNNGG	6 cut(s)	785, 1296, 2003, 2064, 2105, 2106
Bse118I	RCCGGY	1 cut(s)	291
Bse1I	ACTGG	3 cut(s)	743, 1047, 1425
Bse21I	CCTNAGG	2 cut(s)	63, 1090
Bse3DI	GCAATG	2 cut(s)	1876, 2202
BseBI	CCWGG	1 cut(s)	820
BseCI	ATCGAT	1 cut(s)	1746
BseDI	CCNNGG	6 cut(s)	22, 818, 1392, 1644, 2058, 2242
BseGI	GGATG	1 cut(s)	2256
BseLI	CCNNNNNNNGG	6 cut(s)	785, 1296, 2003, 2064, 2105, 2106
BseMI	GCAATG	2 cut(s)	1876, 2202
BseNI	ACTGG	3 cut(s)	743, 1047, 1425
BsePI	GCGCGC	1 cut(s)	793
BseRI	GAGGAG	2 cut(s)	51, 847
BsgI	GTGCAG	2 cut(s)	1152, 1635
Bsh1236I	CGCG	1 cut(s)	795
BshFI	GGCC	4 cut(s)	5, 152, 1606, 2219
BshNI	GGYRCC	1 cut(s)	294
BshVI	ATCGAT	1 cut(s)	1746
BsiHKAI	GWGCWC	3 cut(s)	263, 1557, 1709
BsiHKCI	CYCGRG	1 cut(s)	1611
BsiSI	CCGG	1 cut(s)	292
BslFI	GGGAC	1 cut(s)	1388
BslI	CCNNNNNNNGG	6 cut(s)	785, 1296, 2003, 2064, 2105, 2106
BsmAI	GTCTC	2 cut(s)	1134, 2277
BsmFI	GGGAC	1 cut(s)	1388
BsnI	GGCC	4 cut(s)	5, 152, 1606, 2219
Bso31I	GGTCTC	1 cut(s)	2277
BsoBI	CYCGRG	1 cut(s)	1611
Bsp119I	TTCGAA	1 cut(s)	55
Bsp1286I	GDGCHC	4 cut(s)	263, 1341, 1557, 1709
Bsp19I	CCATGG	1 cut(s)	2058
BspACI	CCGC	6 cut(s)	392, 483, 1334, 2074, 2106, 2247
BspANI	GGCC	4 cut(s)	5, 152, 1606, 2219
BspDI	ATCGAT	1 cut(s)	1746
BspFNI	CGCG	1 cut(s)	795
BspLI	GGNNCC	4 cut(s)	296, 768, 1338, 1642
BspMAI	CTGCAG	6 cut(s)	189, 205, 382, 1005, 1283, 2154
BspMI	ACCTGC	1 cut(s)	2108
BspPI	GGATC	6 cut(s)	340, 416, 429, 1005, 2011, 2034
BspT104I	TTCGAA	1 cut(s)	55
BspT107I	GGYRCC	1 cut(s)	294
BspTI	CTTAAG	1 cut(s)	2138
BspTNI	GGTCTC	1 cut(s)	2277
BsrDI	GCAATG	2 cut(s)	1876, 2202
BsrFI	RCCGGY	1 cut(s)	291
BsrI	ACTGG	3 cut(s)	743, 1047, 1425
BssAI	RCCGGY	1 cut(s)	291
BssECI	CCNNGG	6 cut(s)	22, 818, 1392, 1644, 2058, 2242
BssHII	GCGCGC	1 cut(s)	793
BssT1I	CCWWGG	4 cut(s)	22, 1392, 1644, 2058
Bst2UI	CCWGG	1 cut(s)	820
Bst4CI	ACNGT	4 cut(s)	358, 652, 845, 1428
BstAFI	CTTAAG	1 cut(s)	2138
BstAPI	GCANNNNNTGC	1 cut(s)	218
BstBI	TTCGAA	1 cut(s)	55
BstC8I	GCNNGC	4 cut(s)	150, 795, 1917, 2135
BstDSI	CCRYGG	1 cut(s)	2058
BstF5I	GGATG	1 cut(s)	2256
BstFNI	CGCG	1 cut(s)	795
BstH2I	RGCGCY	1 cut(s)	2231
BstHHI	GCGC	4 cut(s)	795, 797, 1993, 2230
BstMAI	GTCTC	2 cut(s)	1134, 2277
BstMWI	GCNNNNNNNGC	8 cut(s)	209, 218, 469, 1278, 1649, 2103, 2149, 2225
BstNI	CCWGG	1 cut(s)	820
BstNSI	RCATGY	1 cut(s)	1630
BstSCI	CCNGG	1 cut(s)	818
BstSFI	CTRYAG	6 cut(s)	185, 201, 378, 1001, 1279, 2150
BstUI	CGCG	1 cut(s)	795
BstV2I	GAAGAC	3 cut(s)	581, 1239, 1245
BstX2I	RGATCY	7 cut(s)	332, 408, 421, 695, 997, 2016, 2026
BstYI	RGATCY	7 cut(s)	332, 408, 421, 695, 997, 2016, 2026
Bsu15I	ATCGAT	1 cut(s)	1746
Bsu36I	CCTNAGG	2 cut(s)	63, 1090
BsuRI	GGCC	4 cut(s)	5, 152, 1606, 2219
BsuTUI	ATCGAT	1 cut(s)	1746
BtgI	CCRYGG	1 cut(s)	2058
BtrI	CACGTC	1 cut(s)	258
BtsCI	GGATG	1 cut(s)	2256
BtsI	GCAGTG	1 cut(s)	1510
BtsIMutI	CAGTG	3 cut(s)	732, 1433, 1510
BveI	ACCTGC	1 cut(s)	2108
Cac8I	GCNNGC	4 cut(s)	150, 795, 1917, 2135
CaiI	CAGNNNCTG	2 cut(s)	395, 1124
CfoI	GCGC	4 cut(s)	795, 797, 1993, 2230
Cfr10I	RCCGGY	1 cut(s)	291
ClaI	ATCGAT	1 cut(s)	1746
Csp6I	GTAC	4 cut(s)	71, 633, 853, 1759
CviAII	CATG	8 cut(s)	872, 1139, 1291, 1310, 1627, 1691, 2045, 2059
CviQI	GTAC	4 cut(s)	71, 633, 853, 1759
EaeI	YGGCCR	1 cut(s)	3
EciI	GGCGGA	1 cut(s)	2262
Eco130I	CCWWGG	4 cut(s)	22, 1392, 1644, 2058
Eco147I	AGGCCT	1 cut(s)	2219
Eco24I	GRGCYC	1 cut(s)	1341
Eco31I	GGTCTC	1 cut(s)	2277
Eco32I	GATATC	1 cut(s)	1581
Eco47III	AGCGCT	1 cut(s)	2229
Eco57I	CTGAAG	2 cut(s)	597, 936
Eco81I	CCTNAGG	2 cut(s)	63, 1090
Eco88I	CYCGRG	1 cut(s)	1611
EcoRI	GAATTC	1 cut(s)	1963
EcoRII	CCWGG	1 cut(s)	818
EcoRV	GATATC	1 cut(s)	1581
EcoT14I	CCWWGG	4 cut(s)	22, 1392, 1644, 2058
EcoT22I	ATGCAT	1 cut(s)	925
EcoT38I	GRGCYC	1 cut(s)	1341
ErhI	CCWWGG	4 cut(s)	22, 1392, 1644, 2058
FaeI	CATG	8 cut(s)	875, 1142, 1294, 1313, 1630, 1694, 2048, 2062
FalI	AAGNNNNNCTT	2 cut(s)	595, 627
FaqI	GGGAC	1 cut(s)	1388
FatI	CATG	8 cut(s)	871, 1138, 1290, 1309, 1626, 1690, 2044, 2058
FauI	CCCGC	1 cut(s)	2099
FbaI	TGATCA	1 cut(s)	802
FblI	GTMKAC	2 cut(s)	775, 1351
FokI	GGATG	1 cut(s)	2243
FriOI	GRGCYC	1 cut(s)	1341
FspBI	CTAG	2 cut(s)	1910, 2021
GlaI	GCGC	4 cut(s)	794, 796, 1992, 2229
GsuI	CTGGAG	1 cut(s)	1064
HaeII	RGCGCY	1 cut(s)	2231
HaeIII	GGCC	4 cut(s)	5, 152, 1606, 2219
HapII	CCGG	1 cut(s)	292
HhaI	GCGC	4 cut(s)	795, 797, 1993, 2230
Hin1II	CATG	8 cut(s)	875, 1142, 1294, 1313, 1630, 1694, 2048, 2062
Hin6I	GCGC	4 cut(s)	793, 795, 1991, 2228
HinP1I	GCGC	4 cut(s)	793, 795, 1991, 2228
HincII	GTYRAC	1 cut(s)	776
HindII	GTYRAC	1 cut(s)	776
HindIII	AAGCTT	2 cut(s)	1367, 2141
HpaII	CCGG	1 cut(s)	292
HphI	GGTGA	1 cut(s)	681
Hpy166II	GTNNAC	3 cut(s)	710, 776, 1352
Hpy8I	GTNNAC	3 cut(s)	710, 776, 1352
Hpy99I	CGWCG	2 cut(s)	777, 1989
HpyAV	CCTTC	6 cut(s)	187, 227, 553, 597, 1262, 1534
HpyCH4III	ACNGT	4 cut(s)	358, 652, 845, 1428
HpyCH4IV	ACGT	3 cut(s)	257, 898, 1354
HpyF10VI	GCNNNNNNNGC	8 cut(s)	209, 218, 469, 1278, 1649, 2103, 2149, 2225
HpySE526I	ACGT	3 cut(s)	257, 898, 1354
Hsp92II	CATG	8 cut(s)	875, 1142, 1294, 1313, 1630, 1694, 2048, 2062
HspAI	GCGC	4 cut(s)	793, 795, 1991, 2228
Ksp22I	TGATCA	1 cut(s)	802
LmnI	GCTCC	3 cut(s)	1336, 1640, 1712
LweI	GCATC	7 cut(s)	208, 910, 932, 1390, 1441, 1516, 2262
MaeI	CTAG	2 cut(s)	1910, 2021
MaeII	ACGT	3 cut(s)	257, 898, 1354
MaeIII	GTNAC	9 cut(s)	77, 646, 652, 687, 831, 1053, 1224, 1505, 1615
MboII	GAAGA	4 cut(s)	581, 1057, 1239, 1245
MflI	RGATCY	7 cut(s)	332, 408, 421, 695, 997, 2016, 2026
MhlI	GDGCHC	4 cut(s)	263, 1341, 1557, 1709
MlsI	TGGCCA	1 cut(s)	5
MluNI	TGGCCA	1 cut(s)	5
MlyI	GAGTC	8 cut(s)	165, 374, 695, 752, 1106, 1136, 1232, 1623
MmeI	TCCRAC	3 cut(s)	119, 399, 1125
Mox20I	TGGCCA	1 cut(s)	5
Mph1103I	ATGCAT	1 cut(s)	925
MscI	TGGCCA	1 cut(s)	5
MseI	TTAA	3 cut(s)	960, 1482, 2139
MslI	CAYNNNNRTG	2 cut(s)	1910, 2280
Msp20I	TGGCCA	1 cut(s)	5
MspA1I	CMGCKG	2 cut(s)	392, 2074
MspCI	CTTAAG	1 cut(s)	2138
MspI	CCGG	1 cut(s)	292
MspR9I	CCNGG	1 cut(s)	820
MvaI	CCWGG	1 cut(s)	820
MvnI	CGCG	1 cut(s)	795
MwoI	GCNNNNNNNGC	8 cut(s)	209, 218, 469, 1278, 1649, 2103, 2149, 2225
NcoI	CCATGG	1 cut(s)	2058
NlaIII	CATG	8 cut(s)	875, 1142, 1294, 1313, 1630, 1694, 2048, 2062
NlaIV	GGNNCC	4 cut(s)	296, 768, 1338, 1642
NmeAIII	GCCGAG	1 cut(s)	2267
NmuCI	GTSAC	5 cut(s)	77, 687, 1224, 1505, 1615
NsiI	ATGCAT	1 cut(s)	925
NspI	RCATGY	1 cut(s)	1630
NspV	TTCGAA	1 cut(s)	55
OliI	CACNNNNGTG	1 cut(s)	1910
PaeR7I	CTCGAG	1 cut(s)	1611
PauI	GCGCGC	1 cut(s)	793
PceI	AGGCCT	1 cut(s)	2219
PcsI	WCGNNNNNNNCGW	1 cut(s)	1752
PfeI	GAWTC	5 cut(s)	978, 1008, 1217, 1406, 1730
PflMI	CCANNNNNTGG	1 cut(s)	2064
PleI	GAGTC	8 cut(s)	164, 373, 694, 752, 1105, 1135, 1231, 1622
PpsI	GAGTC	8 cut(s)	164, 373, 694, 752, 1105, 1135, 1231, 1622
Psp6I	CCWGG	1 cut(s)	818
PspGI	CCWGG	1 cut(s)	818
PspN4I	GGNNCC	4 cut(s)	296, 768, 1338, 1642
PstI	CTGCAG	6 cut(s)	189, 205, 382, 1005, 1283, 2154
PstNI	CAGNNNCTG	2 cut(s)	395, 1124
PsuI	RGATCY	7 cut(s)	332, 408, 421, 695, 997, 2016, 2026
PteI	GCGCGC	1 cut(s)	793
RsaI	GTAC	4 cut(s)	72, 634, 854, 1760
RsaNI	GTAC	4 cut(s)	71, 633, 853, 1759
RseI	CAYNNNNRTG	2 cut(s)	1910, 2280
SalI	GTCGAC	1 cut(s)	774
SaqAI	TTAA	3 cut(s)	960, 1482, 2139
ScaI	AGTACT	1 cut(s)	854
SchI	GAGTC	8 cut(s)	165, 374, 695, 752, 1106, 1136, 1232, 1623
ScrFI	CCNGG	1 cut(s)	820
SduI	GDGCHC	4 cut(s)	263, 1341, 1557, 1709
SfaNI	GCATC	7 cut(s)	208, 910, 932, 1390, 1441, 1516, 2262
SfcI	CTRYAG	6 cut(s)	185, 201, 378, 1001, 1279, 2150
Sfr274I	CTCGAG	1 cut(s)	1611
SfuI	TTCGAA	1 cut(s)	55
SlaI	CTCGAG	1 cut(s)	1611
SmiMI	CAYNNNNRTG	2 cut(s)	1910, 2280
SmlI	CTYRAG	4 cut(s)	1550, 1562, 1611, 2138
SmoI	CTYRAG	4 cut(s)	1550, 1562, 1611, 2138
SseBI	AGGCCT	1 cut(s)	2219
SsiI	CCGC	6 cut(s)	392, 483, 1334, 2074, 2106, 2247
SspI	AATATT	2 cut(s)	1062, 1072
SspMI	CTAG	2 cut(s)	1910, 2021
StuI	AGGCCT	1 cut(s)	2219
StyD4I	CCNGG	1 cut(s)	818
StyI	CCWWGG	4 cut(s)	22, 1392, 1644, 2058
TaaI	ACNGT	4 cut(s)	358, 652, 845, 1428
TaiI	ACGT	3 cut(s)	260, 901, 1357
TaqI	TCGA	9 cut(s)	55, 368, 546, 775, 1612, 1746, 1755, 1884, 2187
TatI	WGTACW	3 cut(s)	70, 852, 1758
TauI	GCSGC	1 cut(s)	395
TfiI	GAWTC	5 cut(s)	978, 1008, 1217, 1406, 1730
Tru1I	TTAA	3 cut(s)	960, 1482, 2139
Tru9I	TTAA	3 cut(s)	960, 1482, 2139
TscAI	CASTG	3 cut(s)	732, 1433, 1510
TseFI	GTSAC	5 cut(s)	77, 687, 1224, 1505, 1615
Tsp45I	GTSAC	5 cut(s)	77, 687, 1224, 1505, 1615
TspRI	CASTG	3 cut(s)	732, 1433, 1510
Van91I	CCANNNNNTGG	1 cut(s)	2064
Vha464I	CTTAAG	1 cut(s)	2138
XapI	RAATTY	6 cut(s)	32, 478, 810, 965, 1765, 1963
XceI	RCATGY	1 cut(s)	1630
XhoI	CTCGAG	1 cut(s)	1611
XmiI	GTMKAC	2 cut(s)	775, 1351
XspI	CTAG	2 cut(s)	1910, 2021
ZrmI	AGTACT	1 cut(s)	854
Zsp2I	ATGCAT	1 cut(s)	925

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.