RchiOBHm_Chr4g0416471

dual specificity protein phosphatase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
41368820 .. 41369587
768 bp
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UTR
Exon/CDS
Intron
PRQ38662

Sequence Viewer

Length: 186 bp
ATGTTGTCCCTTCGAATCACAAGTAGCCTGTTTATTGGTGGAGCGCTTGCTGCACGATCTATATACACACTGCAACGCTTAGGAATCATTCATATATTATGTTTTTGTTCCAATGAAATTGGACAGTCAGATTCTCAGTTTCCTGATCTATTTGAGTACAAAAACTTCTCTGAGGGAAGGCTCTAG

Protein Analysis

61

Amino Acids

6.84

Weight (kDa)

6.52

Isoelectric Point (pI)

56.98

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 158
AfeI AGCGCT 1 cut(s) 45
Aor51HI AGCGCT 1 cut(s) 45
ApeKI GCWGC 1 cut(s) 50
AspLEI GCGC 1 cut(s) 46
AsuII TTCGAA 1 cut(s) 13
BarI GAAGNNNNNNTAC 2 cut(s) 149, 181
BbvI GCAGC 1 cut(s) 37
BfaI CTAG 1 cut(s) 184
BfoI RGCGCY 1 cut(s) 47
BisI GCNGC 1 cut(s) 51
BlsI GCNGC 1 cut(s) 52
Bpu10I CCTNAGC 1 cut(s) 79
Bpu14I TTCGAA 1 cut(s) 13
BseMII CTCAG 2 cut(s) 149, 162
BseXI GCAGC 1 cut(s) 37
BsgI GTGCAG 1 cut(s) 36
Bsp119I TTCGAA 1 cut(s) 13
Bsp143I GATC 2 cut(s) 56, 145
BspCNI CTCAG 2 cut(s) 148, 163
BspT104I TTCGAA 1 cut(s) 13
BssMI GATC 2 cut(s) 56, 145
Bst4CI ACNGT 1 cut(s) 126
BstBI TTCGAA 1 cut(s) 13
BstC8I GCNNGC 1 cut(s) 48
BstDEI CTNAG 3 cut(s) 79, 135, 171
BstH2I RGCGCY 1 cut(s) 47
BstHHI GCGC 1 cut(s) 46
BstKTI GATC 2 cut(s) 59, 148
BstMBI GATC 2 cut(s) 56, 145
BstMWI GCNNNNNNNGC 1 cut(s) 50
BstV1I GCAGC 1 cut(s) 37
BtsI GCAGTG 1 cut(s) 68
BtsIMutI CAGTG 1 cut(s) 68
Cac8I GCNNGC 1 cut(s) 48
CfoI GCGC 1 cut(s) 46
Csp6I GTAC 1 cut(s) 157
CviJI RGCY 2 cut(s) 27, 181
CviKI_1 RGCY 2 cut(s) 27, 181
CviQI GTAC 1 cut(s) 157
DdeI CTNAG 3 cut(s) 79, 135, 171
DpnI GATC 2 cut(s) 58, 147
DpnII GATC 2 cut(s) 56, 145
Eco47III AGCGCT 1 cut(s) 45
FaiI YATR 5 cut(s) 62, 64, 93, 95, 100
Fnu4HI GCNGC 1 cut(s) 51
Fsp4HI GCNGC 1 cut(s) 51
FspBI CTAG 1 cut(s) 184
GlaI GCGC 1 cut(s) 45
GluI GCNGC 1 cut(s) 51
HaeII RGCGCY 1 cut(s) 47
HhaI GCGC 1 cut(s) 46
Hin6I GCGC 1 cut(s) 44
HinP1I GCGC 1 cut(s) 44
HinfI GANTC 3 cut(s) 15, 84, 131
Hpy188I TCNGA 2 cut(s) 130, 172
Hpy188III TCNNGA 1 cut(s) 143
HpyAV CCTTC 2 cut(s) 20, 171
HpyCH4III ACNGT 1 cut(s) 126
HpyCH4V TGCA 2 cut(s) 53, 73
HpyF10VI GCNNNNNNNGC 1 cut(s) 50
HpyF3I CTNAG 3 cut(s) 79, 135, 171
HspAI GCGC 1 cut(s) 44
Kzo9I GATC 2 cut(s) 56, 145
LmnI GCTCC 1 cut(s) 41
LpnPI CCDG 2 cut(s) 41, 156
Lsp1109I GCAGC 1 cut(s) 37
MaeI CTAG 1 cut(s) 184
MalI GATC 2 cut(s) 58, 147
MboI GATC 2 cut(s) 56, 145
MluCI AATT 1 cut(s) 117
MnlI CCTC 1 cut(s) 166
MwoI GCNNNNNNNGC 1 cut(s) 50
NdeII GATC 2 cut(s) 56, 145
NspV TTCGAA 1 cut(s) 13
PfeI GAWTC 3 cut(s) 15, 84, 131
PkrI GCNGC 1 cut(s) 52
RsaI GTAC 1 cut(s) 158
RsaNI GTAC 1 cut(s) 157
SatI GCNGC 1 cut(s) 51
Sau3AI GATC 2 cut(s) 56, 145
SfuI TTCGAA 1 cut(s) 13
SgeI CNNG 5 cut(s) 33, 40, 59, 66, 155
Sse9I AATT 1 cut(s) 117
SspMI CTAG 1 cut(s) 184
TaaI ACNGT 1 cut(s) 126
TaqI TCGA 1 cut(s) 13
TasI AATT 1 cut(s) 117
TatI WGTACW 1 cut(s) 156
TfiI GAWTC 3 cut(s) 15, 84, 131
TscAI CASTG 1 cut(s) 75
TseI GCWGC 1 cut(s) 50
TspDTI ATGAA 2 cut(s) 80, 129
TspRI CASTG 1 cut(s) 75
XspI CTAG 1 cut(s) 184
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.