Plasma membrane ATPase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom09g08340 |
| rosa_chinensis | RchiOBHm_Chr2g0142631 RchiOBHm_Chr5g0038641 RchiOBHm_Chr5g0070991 |
| rosa_laevigata | RLG00000026599 RLG00000030416 |
| rosa_multiflora | Rmu_co8081158.1_g000001 Rmu_co8186984.1_g000001 Rmu_sc0005722.1_g000001 Rmu_sc0006417.1_g000011 Rmu_sc0012237.1_g000003 Rmu_sc0038346.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00036020 Rroxscaffold_1G00042390 Rroxscaffold_1G00042420 Rroxscaffold_1G00045550 Rroxscaffold_4G00307220 Rroxscaffold_4G00307700 Rroxscaffold_6G00398580 Rroxscaffold_7G00189540 Rroxscaffold_7G00189570 |
| rosa_rugosa | Rorug05G0172400 |
| rosa_samantha | Rh1CG020900 Rh4DG271200 Rh5CG296300 Rh5CG297300 Rh5CG297400 Rh5DG128000 Rh5DG292000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 203 |
| Acc36I | ACCTGC | 1 cut(s) | 30 |
| AccB1I | GGYRCC | 1 cut(s) | 28 |
| AfaI | GTAC | 1 cut(s) | 44 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 39 |
| AgsI | TTSAA | 3 cut(s) | 86, 121, 158 |
| AspS9I | GGNCC | 2 cut(s) | 94, 263 |
| AsuC2I | CCSGG | 1 cut(s) | 68 |
| AvaII | GGWCC | 2 cut(s) | 94, 263 |
| BaeGI | GKGCMC | 1 cut(s) | 33 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 34, 67 |
| BanI | GGYRCC | 1 cut(s) | 28 |
| BcnI | CCSGG | 1 cut(s) | 68 |
| BfaI | CTAG | 1 cut(s) | 186 |
| BfmI | CTRYAG | 1 cut(s) | 58 |
| BfuAI | ACCTGC | 1 cut(s) | 30 |
| Bme1390I | CCNGG | 1 cut(s) | 68 |
| Bme18I | GGWCC | 2 cut(s) | 94, 263 |
| BmgT120I | GGNCC | 2 cut(s) | 94, 263 |
| BmiI | GGNNCC | 1 cut(s) | 30 |
| BmrFI | CCNGG | 1 cut(s) | 68 |
| Bpu10I | CCTNAGC | 1 cut(s) | 35 |
| BpuMI | CCSGG | 1 cut(s) | 68 |
| BsaJI | CCNNGG | 1 cut(s) | 266 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 39 |
| Bse118I | RCCGGY | 2 cut(s) | 195, 235 |
| Bse1I | ACTGG | 2 cut(s) | 13, 329 |
| BseDI | CCNNGG | 1 cut(s) | 266 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 39 |
| BseMII | CTCAG | 1 cut(s) | 26 |
| BseNI | ACTGG | 2 cut(s) | 13, 329 |
| BseSI | GKGCMC | 1 cut(s) | 33 |
| BshNI | GGYRCC | 1 cut(s) | 28 |
| BsiSI | CCGG | 3 cut(s) | 68, 196, 236 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 39 |
| Bsp1286I | GDGCHC | 1 cut(s) | 33 |
| Bsp19I | CCATGG | 1 cut(s) | 266 |
| BspCNI | CTCAG | 1 cut(s) | 27 |
| BspLI | GGNNCC | 1 cut(s) | 30 |
| BspMI | ACCTGC | 1 cut(s) | 30 |
| BspT107I | GGYRCC | 1 cut(s) | 28 |
| BsrFI | RCCGGY | 2 cut(s) | 195, 235 |
| BsrI | ACTGG | 2 cut(s) | 13, 329 |
| BssAI | RCCGGY | 2 cut(s) | 195, 235 |
| BssECI | CCNNGG | 1 cut(s) | 266 |
| BssT1I | CCWWGG | 1 cut(s) | 266 |
| BstC8I | GCNNGC | 2 cut(s) | 21, 237 |
| BstDEI | CTNAG | 1 cut(s) | 35 |
| BstDSI | CCRYGG | 1 cut(s) | 266 |
| BstSCI | CCNGG | 1 cut(s) | 66 |
| BstSFI | CTRYAG | 1 cut(s) | 58 |
| BstSLI | GKGCMC | 1 cut(s) | 33 |
| BtgI | CCRYGG | 1 cut(s) | 266 |
| BveI | ACCTGC | 1 cut(s) | 30 |
| Cac8I | GCNNGC | 2 cut(s) | 21, 237 |
| Cfr10I | RCCGGY | 2 cut(s) | 195, 235 |
| Cfr13I | GGNCC | 2 cut(s) | 94, 263 |
| Csp6I | GTAC | 1 cut(s) | 43 |
| CviAII | CATG | 2 cut(s) | 267, 311 |
| CviJI | RGCY | 4 cut(s) | 131, 166, 179, 199 |
| CviKI_1 | RGCY | 4 cut(s) | 131, 166, 179, 199 |
| CviQI | GTAC | 1 cut(s) | 43 |
| DdeI | CTNAG | 1 cut(s) | 35 |
| Eco130I | CCWWGG | 1 cut(s) | 266 |
| Eco47I | GGWCC | 2 cut(s) | 94, 263 |
| EcoT14I | CCWWGG | 1 cut(s) | 266 |
| ErhI | CCWWGG | 1 cut(s) | 266 |
| FaeI | CATG | 2 cut(s) | 270, 314 |
| FaiI | YATR | 8 cut(s) | 14, 60, 153, 203, 218, 220, 268, 312 |
| FatI | CATG | 2 cut(s) | 266, 310 |
| FspBI | CTAG | 1 cut(s) | 186 |
| HapII | CCGG | 3 cut(s) | 68, 196, 236 |
| Hin1II | CATG | 2 cut(s) | 270, 314 |
| HpaII | CCGG | 3 cut(s) | 68, 196, 236 |
| Hpy166II | GTNNAC | 1 cut(s) | 224 |
| Hpy188III | TCNNGA | 1 cut(s) | 121 |
| Hpy8I | GTNNAC | 1 cut(s) | 224 |
| HpyAV | CCTTC | 1 cut(s) | 121 |
| HpyCH4IV | ACGT | 1 cut(s) | 160 |
| HpyCH4V | TGCA | 2 cut(s) | 73, 108 |
| HpyF3I | CTNAG | 1 cut(s) | 35 |
| HpySE526I | ACGT | 1 cut(s) | 160 |
| Hsp92II | CATG | 2 cut(s) | 270, 314 |
| KroI | GCCGGC | 1 cut(s) | 235 |
| KroNI | GCCGGC | 1 cut(s) | 237 |
| LpnPI | CCDG | 8 cut(s) | 25, 47, 81, 209, 212, 243, 249, 310 |
| MaeI | CTAG | 1 cut(s) | 186 |
| MaeII | ACGT | 1 cut(s) | 160 |
| MaeIII | GTNAC | 1 cut(s) | 62 |
| MboII | GAAGA | 2 cut(s) | 125, 136 |
| MhlI | GDGCHC | 1 cut(s) | 33 |
| MluCI | AATT | 1 cut(s) | 204 |
| MmeI | TCCRAC | 1 cut(s) | 259 |
| MnlI | CCTC | 4 cut(s) | 107, 113, 300, 312 |
| MroNI | GCCGGC | 1 cut(s) | 235 |
| MslI | CAYNNNNRTG | 1 cut(s) | 315 |
| MspI | CCGG | 3 cut(s) | 68, 196, 236 |
| MspR9I | CCNGG | 1 cut(s) | 68 |
| NaeI | GCCGGC | 1 cut(s) | 237 |
| NciI | CCSGG | 1 cut(s) | 68 |
| NcoI | CCATGG | 1 cut(s) | 266 |
| NgoMIV | GCCGGC | 1 cut(s) | 235 |
| NlaIII | CATG | 2 cut(s) | 270, 314 |
| NlaIV | GGNNCC | 1 cut(s) | 30 |
| PdiI | GCCGGC | 1 cut(s) | 237 |
| PsiI | TTATAA | 1 cut(s) | 203 |
| PspN4I | GGNNCC | 1 cut(s) | 30 |
| PspPI | GGNCC | 2 cut(s) | 94, 263 |
| RsaI | GTAC | 1 cut(s) | 44 |
| RsaNI | GTAC | 1 cut(s) | 43 |
| RseI | CAYNNNNRTG | 1 cut(s) | 315 |
| Sau96I | GGNCC | 2 cut(s) | 94, 263 |
| ScrFI | CCNGG | 1 cut(s) | 68 |
| SduI | GDGCHC | 1 cut(s) | 33 |
| SetI | ASST | 4 cut(s) | 30, 44, 99, 163 |
| SfcI | CTRYAG | 1 cut(s) | 58 |
| SinI | GGWCC | 2 cut(s) | 94, 263 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 315 |
| Sse9I | AATT | 1 cut(s) | 204 |
| SspMI | CTAG | 1 cut(s) | 186 |
| StyD4I | CCNGG | 1 cut(s) | 66 |
| StyI | CCWWGG | 1 cut(s) | 266 |
| TaiI | ACGT | 1 cut(s) | 163 |
| TaqI | TCGA | 1 cut(s) | 297 |
| TaqII | GACCGA | 1 cut(s) | 159 |
| TasI | AATT | 1 cut(s) | 204 |
| VpaK11BI | GGWCC | 2 cut(s) | 94, 263 |
| XspI | CTAG | 1 cut(s) | 186 |