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| Species | Orthologous Gene IDs |
|---|---|
| pyrus_communis | pycom09g08340 |
| rosa_chinensis | RchiOBHm_Chr2g0142631 RchiOBHm_Chr5g0038641 RchiOBHm_Chr5g0070991 |
| rosa_laevigata | RLG00000026599 RLG00000030416 |
| rosa_multiflora | Rmu_co8081158.1_g000001 Rmu_co8186984.1_g000001 Rmu_sc0005722.1_g000001 Rmu_sc0006417.1_g000011 Rmu_sc0012237.1_g000003 Rmu_sc0038346.1_g000002 |
| rosa_roxburghii | Rroxscaffold_1G00036020 Rroxscaffold_1G00042390 Rroxscaffold_1G00042420 Rroxscaffold_1G00045550 Rroxscaffold_4G00307220 Rroxscaffold_4G00307700 Rroxscaffold_6G00398580 Rroxscaffold_7G00189540 Rroxscaffold_7G00189570 |
| rosa_rugosa | Rorug05G0172400 |
| rosa_samantha | Rh1CG020900 Rh4DG271200 Rh5CG296300 Rh5CG297300 Rh5CG297400 Rh5DG128000 Rh5DG292000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 2 cut(s) | 71, 74 |
| AfaI | GTAC | 1 cut(s) | 139 |
| AgsI | TTSAA | 2 cut(s) | 123, 311 |
| AluBI | AGCT | 3 cut(s) | 197, 264, 328 |
| AluI | AGCT | 3 cut(s) | 197, 264, 328 |
| ApeKI | GCWGC | 4 cut(s) | 35, 291, 294, 297 |
| AsuNHI | GCTAGC | 1 cut(s) | 31 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 129, 162 |
| BbvI | GCAGC | 4 cut(s) | 47, 303, 306, 309 |
| BccI | CCATC | 1 cut(s) | 281 |
| BclI | TGATCA | 1 cut(s) | 189 |
| BfaI | CTAG | 1 cut(s) | 32 |
| BisI | GCNGC | 6 cut(s) | 36, 72, 75, 292, 295, 298 |
| BlsI | GCNGC | 6 cut(s) | 37, 73, 76, 293, 296, 299 |
| BmrI | ACTGGG | 1 cut(s) | 103 |
| BmsI | GCATC | 1 cut(s) | 116 |
| BmtI | GCTAGC | 1 cut(s) | 35 |
| BmuI | ACTGGG | 1 cut(s) | 103 |
| BpmI | CTGGAG | 1 cut(s) | 226 |
| BpuEI | CTTGAG | 1 cut(s) | 70 |
| Bsa29I | ATCGAT | 1 cut(s) | 110 |
| Bse1I | ACTGG | 1 cut(s) | 98 |
| BseCI | ATCGAT | 1 cut(s) | 110 |
| BseGI | GGATG | 1 cut(s) | 103 |
| BseNI | ACTGG | 1 cut(s) | 98 |
| BseXI | GCAGC | 4 cut(s) | 47, 303, 306, 309 |
| BshVI | ATCGAT | 1 cut(s) | 110 |
| Bsp143I | GATC | 3 cut(s) | 111, 189, 201 |
| BspACI | CCGC | 2 cut(s) | 71, 74 |
| BspDI | ATCGAT | 1 cut(s) | 110 |
| BspOI | GCTAGC | 1 cut(s) | 35 |
| BsrI | ACTGG | 1 cut(s) | 98 |
| BssMI | GATC | 3 cut(s) | 111, 189, 201 |
| BstC8I | GCNNGC | 2 cut(s) | 33, 105 |
| BstF5I | GGATG | 1 cut(s) | 103 |
| BstKTI | GATC | 3 cut(s) | 114, 192, 204 |
| BstMBI | GATC | 3 cut(s) | 111, 189, 201 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 297 |
| BstV1I | GCAGC | 4 cut(s) | 47, 303, 306, 309 |
| Bsu15I | ATCGAT | 1 cut(s) | 110 |
| BsuTUI | ATCGAT | 1 cut(s) | 110 |
| BtsCI | GGATG | 1 cut(s) | 103 |
| Cac8I | GCNNGC | 2 cut(s) | 33, 105 |
| ClaI | ATCGAT | 1 cut(s) | 110 |
| Csp6I | GTAC | 1 cut(s) | 138 |
| CviJI | RGCY | 7 cut(s) | 77, 117, 197, 264, 300, 328, 345 |
| CviKI_1 | RGCY | 7 cut(s) | 77, 117, 197, 264, 300, 328, 345 |
| CviQI | GTAC | 1 cut(s) | 138 |
| DpnI | GATC | 3 cut(s) | 113, 191, 203 |
| DpnII | GATC | 3 cut(s) | 111, 189, 201 |
| FaiI | YATR | 1 cut(s) | 155 |
| FbaI | TGATCA | 1 cut(s) | 189 |
| Fnu4HI | GCNGC | 6 cut(s) | 36, 72, 75, 292, 295, 298 |
| FokI | GGATG | 1 cut(s) | 110 |
| Fsp4HI | GCNGC | 6 cut(s) | 36, 72, 75, 292, 295, 298 |
| FspBI | CTAG | 1 cut(s) | 32 |
| GluI | GCNGC | 6 cut(s) | 36, 72, 75, 292, 295, 298 |
| GsuI | CTGGAG | 1 cut(s) | 226 |
| HindIII | AAGCTT | 1 cut(s) | 195 |
| Hpy188I | TCNGA | 2 cut(s) | 163, 325 |
| Hpy188III | TCNNGA | 1 cut(s) | 205 |
| HpyAV | CCTTC | 2 cut(s) | 128, 129 |
| HpyCH4IV | ACGT | 1 cut(s) | 140 |
| HpyCH4V | TGCA | 3 cut(s) | 103, 128, 185 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 297 |
| HpySE526I | ACGT | 1 cut(s) | 140 |
| Ksp22I | TGATCA | 1 cut(s) | 189 |
| Kzo9I | GATC | 3 cut(s) | 111, 189, 201 |
| LmnI | GCTCC | 1 cut(s) | 269 |
| LpnPI | CCDG | 6 cut(s) | 43, 79, 190, 266, 274, 327 |
| Lsp1109I | GCAGC | 4 cut(s) | 47, 303, 306, 309 |
| LweI | GCATC | 1 cut(s) | 116 |
| MaeI | CTAG | 1 cut(s) | 32 |
| MaeII | ACGT | 1 cut(s) | 140 |
| MalI | GATC | 3 cut(s) | 113, 191, 203 |
| MboI | GATC | 3 cut(s) | 111, 189, 201 |
| MboII | GAAGA | 1 cut(s) | 296 |
| MfeI | CAATTG | 1 cut(s) | 123 |
| MluCI | AATT | 1 cut(s) | 123 |
| MnlI | CCTC | 2 cut(s) | 203, 216 |
| MseI | TTAA | 3 cut(s) | 14, 147, 330 |
| MunI | CAATTG | 1 cut(s) | 123 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 297 |
| NdeII | GATC | 3 cut(s) | 111, 189, 201 |
| NheI | GCTAGC | 1 cut(s) | 31 |
| PkrI | GCNGC | 6 cut(s) | 37, 73, 76, 293, 296, 299 |
| RsaI | GTAC | 1 cut(s) | 139 |
| RsaNI | GTAC | 1 cut(s) | 138 |
| SaqAI | TTAA | 3 cut(s) | 14, 147, 330 |
| SatI | GCNGC | 6 cut(s) | 36, 72, 75, 292, 295, 298 |
| Sau3AI | GATC | 3 cut(s) | 111, 189, 201 |
| SetI | ASST | 7 cut(s) | 139, 143, 199, 214, 266, 330, 337 |
| SfaNI | GCATC | 1 cut(s) | 116 |
| SmlI | CTYRAG | 1 cut(s) | 49 |
| SmoI | CTYRAG | 1 cut(s) | 49 |
| Sse9I | AATT | 1 cut(s) | 123 |
| SsiI | CCGC | 2 cut(s) | 71, 74 |
| SspMI | CTAG | 1 cut(s) | 32 |
| TaiI | ACGT | 1 cut(s) | 143 |
| TaqI | TCGA | 1 cut(s) | 110 |
| TasI | AATT | 1 cut(s) | 123 |
| TauI | GCSGC | 2 cut(s) | 74, 77 |
| Tru1I | TTAA | 3 cut(s) | 14, 147, 330 |
| Tru9I | TTAA | 3 cut(s) | 14, 147, 330 |
| TseI | GCWGC | 4 cut(s) | 35, 291, 294, 297 |
| TspDTI | ATGAA | 5 cut(s) | 32, 147, 170, 245, 294 |
| XspI | CTAG | 1 cut(s) | 32 |