pycom09g16780

Bifunctional epoxide hydrolase 2-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0001763
Physical Location & Seq
Reverse (-)
17165189 .. 17165446
258 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g16780.1

Sequence Viewer

Length: 258 bp
ATGACACTAGGTATTCCTTTCATTCTGACACCTGCTCTGCCTGCATACCTGACACCCGCTCTCCACCCAGAGCGCGTATCAGGTGTTATAACACTAGGGATTCCTTTCATTCAACCAGGCCCCTCTGCCATCCAAAATCATCTCCTCCCTGAAGGTTTGTACATATCAAGATGGCAGGTACATTCATTTTTCCATCAGCATCTTCATTTTCTTCACAAAAAATTTCACCTCACCGTTTCTACTCATTACAAGGGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000287 GO:0001676 GO:0003008 GO:0003013 GO:0003018 GO:0003674 GO:0003824 GO:0004301 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005777 GO:0005782 GO:0005829 GO:0006082 GO:0006605 GO:0006625 GO:0006629 GO:0006631 GO:0006633 GO:0006690 GO:0006725 GO:0006793 GO:0006796 GO:0006805 GO:0006810 GO:0006873 GO:0006874 GO:0006875 GO:0006886 GO:0006950 GO:0006952 GO:0006954 GO:0006996 GO:0007031 GO:0008015 GO:0008104 GO:0008150 GO:0008152 GO:0008217 GO:0008610 GO:0009056 GO:0009058 GO:0009410 GO:0009636 GO:0009810 GO:0009893 GO:0009987 GO:0010468 GO:0010604 GO:0010628 GO:0015031 GO:0015643 GO:0015833 GO:0016043 GO:0016053 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0016801 GO:0016803 GO:0017144 GO:0018904 GO:0019216 GO:0019218 GO:0019222 GO:0019369 GO:0019373 GO:0019439 GO:0019725 GO:0019752 GO:0030003 GO:0030258 GO:0031907 GO:0031974 GO:0032501 GO:0032787 GO:0033036 GO:0033365 GO:0033559 GO:0034613 GO:0035150 GO:0035296 GO:0042221 GO:0042577 GO:0042578 GO:0042579 GO:0042592 GO:0042632 GO:0042759 GO:0042802 GO:0042803 GO:0042886 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043574 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044255 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044438 GO:0044439 GO:0044444 GO:0044446 GO:0044464 GO:0045184 GO:0046272 GO:0046394 GO:0046483 GO:0046839 GO:0046872 GO:0046907 GO:0046983 GO:0048518 GO:0048878 GO:0050789 GO:0050801 GO:0050880 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055065 GO:0055074 GO:0055080 GO:0055082 GO:0055088 GO:0055092 GO:0060255 GO:0062012 GO:0065007 GO:0065008 GO:0070013 GO:0070727 GO:0070887 GO:0071466 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072330 GO:0072503 GO:0072507 GO:0072593 GO:0072594 GO:0072662 GO:0072663 GO:0080090 GO:0090066 GO:0090181 GO:0097176 GO:0097746 GO:0097755 GO:0098771 GO:1900673 GO:1901360 GO:1901361 GO:1901568 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Abhydrolase_1 Abhydrolase_6

Protein Analysis

86

Amino Acids

9.61

Weight (kDa)

9.7

Isoelectric Point (pI)

47.13

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 89
AarI CACCTGC 1 cut(s) 40
Acc36I ACCTGC 2 cut(s) 40, 166
AccBSI CCGCTC 1 cut(s) 59
AccII CGCG 1 cut(s) 75
AciI CCGC 1 cut(s) 57
AcsI RAATTY 1 cut(s) 221
AcuI CTGAAG 1 cut(s) 171
AfaI GTAC 2 cut(s) 161, 180
AgsI TTSAA 1 cut(s) 113
AjnI CCWGG 1 cut(s) 115
AoxI GGCC 1 cut(s) 118
ApoI RAATTY 1 cut(s) 221
AspLEI GCGC 1 cut(s) 75
AspS9I GGNCC 1 cut(s) 119
AsuHPI GGTGA 2 cut(s) 218, 223
BccI CCATC 3 cut(s) 137, 165, 201
BciT130I CCWGG 1 cut(s) 117
BfaI CTAG 2 cut(s) 8, 95
BfuAI ACCTGC 2 cut(s) 40, 166
Bme1390I CCNGG 1 cut(s) 117
BmgT120I GGNCC 1 cut(s) 119
BmiI GGNNCC 1 cut(s) 121
BmrFI CCNGG 1 cut(s) 117
BmsI GCATC 1 cut(s) 208
BsaXI ACNNNNNCTCC 2 cut(s) 45, 75
BseBI CCWGG 1 cut(s) 117
BseGI GGATG 1 cut(s) 129
BseRI GAGGAG 1 cut(s) 134
Bsh1236I CGCG 1 cut(s) 75
BshFI GGCC 1 cut(s) 120
BsnI GGCC 1 cut(s) 120
Bsp1407I TGTACA 1 cut(s) 159
BspACI CCGC 1 cut(s) 57
BspANI GGCC 1 cut(s) 120
BspFNI CGCG 1 cut(s) 75
BspLI GGNNCC 1 cut(s) 121
BspMI ACCTGC 2 cut(s) 40, 166
BsrBI CCGCTC 1 cut(s) 59
BsrGI TGTACA 1 cut(s) 159
Bst2UI CCWGG 1 cut(s) 117
Bst4CI ACNGT 1 cut(s) 235
BstAUI TGTACA 1 cut(s) 159
BstC8I GCNNGC 1 cut(s) 42
BstF5I GGATG 1 cut(s) 129
BstFNI CGCG 1 cut(s) 75
BstHHI GCGC 1 cut(s) 75
BstMWI GCNNNNNNNGC 1 cut(s) 41
BstNI CCWGG 1 cut(s) 117
BstSCI CCNGG 1 cut(s) 115
BstUI CGCG 1 cut(s) 75
BsuRI GGCC 1 cut(s) 120
BtsCI GGATG 1 cut(s) 129
BveI ACCTGC 2 cut(s) 40, 166
Cac8I GCNNGC 1 cut(s) 42
CfoI GCGC 1 cut(s) 75
Cfr13I GGNCC 1 cut(s) 119
Csp6I GTAC 2 cut(s) 160, 179
CviJI RGCY 1 cut(s) 120
CviKI_1 RGCY 1 cut(s) 120
CviQI GTAC 2 cut(s) 160, 179
Eco57I CTGAAG 1 cut(s) 171
EcoO109I RGGNCCY 1 cut(s) 119
EcoRII CCWGG 1 cut(s) 115
FaiI YATR 3 cut(s) 46, 89, 164
FauI CCCGC 1 cut(s) 64
FokI GGATG 1 cut(s) 116
FspBI CTAG 2 cut(s) 8, 95
GlaI GCGC 1 cut(s) 74
HaeIII GGCC 1 cut(s) 120
HhaI GCGC 1 cut(s) 75
Hin6I GCGC 1 cut(s) 73
HinP1I GCGC 1 cut(s) 73
HinfI GANTC 1 cut(s) 100
HphI GGTGA 2 cut(s) 218, 223
Hpy188I TCNGA 1 cut(s) 27
Hpy188III TCNNGA 1 cut(s) 168
HpyAV CCTTC 1 cut(s) 146
HpyCH4III ACNGT 1 cut(s) 235
HpyCH4V TGCA 1 cut(s) 44
HpyF10VI GCNNNNNNNGC 1 cut(s) 41
HspAI GCGC 1 cut(s) 73
LpnPI CCDG 9 cut(s) 45, 54, 62, 66, 81, 102, 129, 161, 162
LweI GCATC 1 cut(s) 208
MaeI CTAG 2 cut(s) 8, 95
MbiI CCGCTC 1 cut(s) 59
MboII GAAGA 2 cut(s) 194, 203
MluCI AATT 1 cut(s) 221
MnlI CCTC 3 cut(s) 133, 155, 239
MspR9I CCNGG 1 cut(s) 117
MvaI CCWGG 1 cut(s) 117
MvnI CGCG 1 cut(s) 75
MwoI GCNNNNNNNGC 1 cut(s) 41
NlaIV GGNNCC 1 cut(s) 121
PaqCI CACCTGC 1 cut(s) 40
PfeI GAWTC 1 cut(s) 100
PsiI TTATAA 1 cut(s) 89
Psp6I CCWGG 1 cut(s) 115
PspGI CCWGG 1 cut(s) 115
PspN4I GGNNCC 1 cut(s) 121
PspPI GGNCC 1 cut(s) 119
RsaI GTAC 2 cut(s) 161, 180
RsaNI GTAC 2 cut(s) 160, 179
Sau96I GGNCC 1 cut(s) 119
ScrFI CCNGG 1 cut(s) 117
SetI ASST 7 cut(s) 13, 34, 51, 85, 157, 180, 231
SfaNI GCATC 1 cut(s) 208
Sse9I AATT 1 cut(s) 221
SsiI CCGC 1 cut(s) 57
SspMI CTAG 2 cut(s) 8, 95
StyD4I CCNGG 1 cut(s) 115
TaaI ACNGT 1 cut(s) 235
TasI AATT 1 cut(s) 221
TatI WGTACW 1 cut(s) 159
TfiI GAWTC 1 cut(s) 100
TspDTI ATGAA 4 cut(s) 10, 97, 174, 194
XapI RAATTY 1 cut(s) 221
XspI CTAG 2 cut(s) 8, 95
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.