Tobamovirus multiplication protein 1-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 524 |
| AciI | CCGC | 2 cut(s) | 481, 1033 |
| AclWI | GGATC | 3 cut(s) | 560, 615, 914 |
| AcsI | RAATTY | 4 cut(s) | 114, 127, 285, 418 |
| AluBI | AGCT | 6 cut(s) | 389, 704, 737, 938, 1011, 1019 |
| AluI | AGCT | 6 cut(s) | 389, 704, 737, 938, 1011, 1019 |
| AlwI | GGATC | 3 cut(s) | 560, 615, 914 |
| Ama87I | CYCGRG | 3 cut(s) | 121, 594, 763 |
| ApeKI | GCWGC | 3 cut(s) | 221, 299, 1019 |
| ApoI | RAATTY | 4 cut(s) | 114, 127, 285, 418 |
| AspLEI | GCGC | 1 cut(s) | 586 |
| AspS9I | GGNCC | 1 cut(s) | 246 |
| AsuHPI | GGTGA | 2 cut(s) | 514, 751 |
| AvaI | CYCGRG | 3 cut(s) | 121, 594, 763 |
| AvaII | GGWCC | 1 cut(s) | 246 |
| AxyI | CCTNAGG | 1 cut(s) | 674 |
| BanII | GRGCYC | 1 cut(s) | 663 |
| BbsI | GAAGAC | 1 cut(s) | 407 |
| BbvCI | CCTCAGC | 1 cut(s) | 889 |
| BbvI | GCAGC | 3 cut(s) | 208, 286, 1006 |
| BccI | CCATC | 4 cut(s) | 68, 348, 553, 964 |
| BfaI | CTAG | 1 cut(s) | 512 |
| BisI | GCNGC | 4 cut(s) | 222, 300, 481, 1020 |
| BlsI | GCNGC | 4 cut(s) | 223, 301, 482, 1021 |
| Bme18I | GGWCC | 1 cut(s) | 246 |
| BmeT110I | CYCGRG | 3 cut(s) | 121, 594, 763 |
| BmgT120I | GGNCC | 1 cut(s) | 246 |
| BmiI | GGNNCC | 2 cut(s) | 662, 1037 |
| BmrI | ACTGGG | 1 cut(s) | 146 |
| BmsI | GCATC | 3 cut(s) | 615, 823, 1032 |
| BmuI | ACTGGG | 1 cut(s) | 146 |
| BpiI | GAAGAC | 1 cut(s) | 407 |
| Bpu10I | CCTNAGC | 1 cut(s) | 889 |
| BsaBI | GATNNNNATC | 1 cut(s) | 813 |
| BsaJI | CCNNGG | 2 cut(s) | 32, 894 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 39, 69 |
| Bse1I | ACTGG | 1 cut(s) | 141 |
| Bse21I | CCTNAGG | 1 cut(s) | 674 |
| Bse3DI | GCAATG | 3 cut(s) | 245, 275, 1029 |
| Bse8I | GATNNNNATC | 1 cut(s) | 813 |
| BseDI | CCNNGG | 2 cut(s) | 32, 894 |
| BseGI | GGATG | 5 cut(s) | 364, 373, 564, 684, 1000 |
| BseJI | GATNNNNATC | 1 cut(s) | 813 |
| BseMI | GCAATG | 3 cut(s) | 245, 275, 1029 |
| BseMII | CTCAG | 2 cut(s) | 702, 903 |
| BseNI | ACTGG | 1 cut(s) | 141 |
| BseRI | GAGGAG | 2 cut(s) | 377, 654 |
| BseXI | GCAGC | 3 cut(s) | 208, 286, 1006 |
| BsgI | GTGCAG | 1 cut(s) | 558 |
| BsiHKCI | CYCGRG | 3 cut(s) | 121, 594, 763 |
| BsoBI | CYCGRG | 3 cut(s) | 121, 594, 763 |
| Bsp1286I | GDGCHC | 1 cut(s) | 663 |
| Bsp143I | GATC | 4 cut(s) | 552, 607, 692, 906 |
| BspACI | CCGC | 2 cut(s) | 481, 1033 |
| BspCNI | CTCAG | 2 cut(s) | 703, 902 |
| BspLI | GGNNCC | 2 cut(s) | 662, 1037 |
| BspPI | GGATC | 3 cut(s) | 560, 615, 914 |
| BspQI | GCTCTTC | 1 cut(s) | 184 |
| BsrDI | GCAATG | 3 cut(s) | 245, 275, 1029 |
| BsrI | ACTGG | 1 cut(s) | 141 |
| BssECI | CCNNGG | 2 cut(s) | 32, 894 |
| BssMI | GATC | 4 cut(s) | 552, 607, 692, 906 |
| BssT1I | CCWWGG | 1 cut(s) | 894 |
| Bst4CI | ACNGT | 3 cut(s) | 449, 508, 983 |
| Bst6I | CTCTTC | 1 cut(s) | 184 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 92 |
| BstC8I | GCNNGC | 1 cut(s) | 226 |
| BstDEI | CTNAG | 3 cut(s) | 674, 711, 889 |
| BstF5I | GGATG | 5 cut(s) | 364, 373, 564, 684, 1000 |
| BstHHI | GCGC | 1 cut(s) | 586 |
| BstKTI | GATC | 4 cut(s) | 555, 610, 695, 909 |
| BstMBI | GATC | 4 cut(s) | 552, 607, 692, 906 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 92, 590, 734, 820 |
| BstNSI | RCATGY | 1 cut(s) | 732 |
| BstV1I | GCAGC | 3 cut(s) | 208, 286, 1006 |
| BstV2I | GAAGAC | 1 cut(s) | 407 |
| BstX2I | RGATCY | 1 cut(s) | 607 |
| BstYI | RGATCY | 1 cut(s) | 607 |
| Bsu36I | CCTNAGG | 1 cut(s) | 674 |
| BtsCI | GGATG | 5 cut(s) | 364, 373, 564, 684, 1000 |
| BtsI | GCAGTG | 1 cut(s) | 546 |
| BtsIMutI | CAGTG | 2 cut(s) | 546, 982 |
| Cac8I | GCNNGC | 1 cut(s) | 226 |
| CfoI | GCGC | 1 cut(s) | 586 |
| Cfr13I | GGNCC | 1 cut(s) | 246 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 238, 273 |
| CviAII | CATG | 2 cut(s) | 271, 729 |
| DdeI | CTNAG | 3 cut(s) | 674, 711, 889 |
| DpnI | GATC | 4 cut(s) | 554, 609, 694, 908 |
| DpnII | GATC | 4 cut(s) | 552, 607, 692, 906 |
| Eam1104I | CTCTTC | 1 cut(s) | 184 |
| EarI | CTCTTC | 1 cut(s) | 184 |
| Eco130I | CCWWGG | 1 cut(s) | 894 |
| Eco24I | GRGCYC | 1 cut(s) | 663 |
| Eco32I | GATATC | 1 cut(s) | 1050 |
| Eco47I | GGWCC | 1 cut(s) | 246 |
| Eco81I | CCTNAGG | 1 cut(s) | 674 |
| Eco88I | CYCGRG | 3 cut(s) | 121, 594, 763 |
| EcoRI | GAATTC | 3 cut(s) | 114, 127, 418 |
| EcoRV | GATATC | 1 cut(s) | 1050 |
| EcoT14I | CCWWGG | 1 cut(s) | 894 |
| EcoT38I | GRGCYC | 1 cut(s) | 663 |
| ErhI | CCWWGG | 1 cut(s) | 894 |
| FaeI | CATG | 2 cut(s) | 274, 732 |
| FatI | CATG | 2 cut(s) | 270, 728 |
| Fnu4HI | GCNGC | 4 cut(s) | 222, 300, 481, 1020 |
| FokI | GGATG | 5 cut(s) | 371, 380, 571, 691, 987 |
| FriOI | GRGCYC | 1 cut(s) | 663 |
| Fsp4HI | GCNGC | 4 cut(s) | 222, 300, 481, 1020 |
| FspBI | CTAG | 1 cut(s) | 512 |
| GlaI | GCGC | 1 cut(s) | 585 |
| GluI | GCNGC | 4 cut(s) | 222, 300, 481, 1020 |
| HhaI | GCGC | 1 cut(s) | 586 |
| Hin1II | CATG | 2 cut(s) | 274, 732 |
| Hin6I | GCGC | 1 cut(s) | 584 |
| HinP1I | GCGC | 1 cut(s) | 584 |
| HincII | GTYRAC | 2 cut(s) | 331, 786 |
| HindII | GTYRAC | 2 cut(s) | 331, 786 |
| HindIII | AAGCTT | 1 cut(s) | 387 |
| HinfI | GANTC | 2 cut(s) | 145, 578 |
| HpaI | GTTAAC | 1 cut(s) | 786 |
| HphI | GGTGA | 2 cut(s) | 514, 751 |
| Hpy166II | GTNNAC | 3 cut(s) | 331, 413, 786 |
| Hpy188I | TCNGA | 3 cut(s) | 33, 697, 712 |
| Hpy188III | TCNNGA | 4 cut(s) | 383, 556, 910, 1053 |
| Hpy8I | GTNNAC | 3 cut(s) | 331, 413, 786 |
| HpyAV | CCTTC | 3 cut(s) | 11, 365, 715 |
| HpyCH4III | ACNGT | 3 cut(s) | 449, 508, 983 |
| HpyCH4V | TGCA | 7 cut(s) | 95, 228, 539, 617, 728, 1022, 1045 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 92, 590, 734, 820 |
| HpyF3I | CTNAG | 3 cut(s) | 674, 711, 889 |
| Hsp92II | CATG | 2 cut(s) | 274, 732 |
| HspAI | GCGC | 1 cut(s) | 584 |
| KspAI | GTTAAC | 1 cut(s) | 786 |
| Kzo9I | GATC | 4 cut(s) | 552, 607, 692, 906 |
| LguI | GCTCTTC | 1 cut(s) | 184 |
| LmnI | GCTCC | 2 cut(s) | 641, 666 |
| LpnPI | CCDG | 9 cut(s) | 53, 122, 310, 329, 347, 497, 572, 997, 1052 |
| Lsp1109I | GCAGC | 3 cut(s) | 208, 286, 1006 |
| LweI | GCATC | 3 cut(s) | 615, 823, 1032 |
| MaeI | CTAG | 1 cut(s) | 512 |
| MaeIII | GTNAC | 2 cut(s) | 502, 977 |
| MalI | GATC | 4 cut(s) | 554, 609, 694, 908 |
| MboI | GATC | 4 cut(s) | 552, 607, 692, 906 |
| MboII | GAAGA | 5 cut(s) | 171, 299, 412, 699, 962 |
| MflI | RGATCY | 1 cut(s) | 607 |
| MhlI | GDGCHC | 1 cut(s) | 663 |
| MlyI | GAGTC | 1 cut(s) | 139 |
| MmeI | TCCRAC | 2 cut(s) | 122, 273 |
| MseI | TTAA | 3 cut(s) | 107, 197, 785 |
| MslI | CAYNNNNRTG | 1 cut(s) | 649 |
| MspA1I | CMGCKG | 1 cut(s) | 1019 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 92, 590, 734, 820 |
| NdeII | GATC | 4 cut(s) | 552, 607, 692, 906 |
| NlaIII | CATG | 2 cut(s) | 274, 732 |
| NlaIV | GGNNCC | 2 cut(s) | 662, 1037 |
| NmeAIII | GCCGAG | 1 cut(s) | 127 |
| NmuCI | GTSAC | 2 cut(s) | 502, 977 |
| NspI | RCATGY | 1 cut(s) | 732 |
| PaeR7I | CTCGAG | 2 cut(s) | 121, 763 |
| PciSI | GCTCTTC | 1 cut(s) | 184 |
| PfeI | GAWTC | 1 cut(s) | 578 |
| PkrI | GCNGC | 4 cut(s) | 223, 301, 482, 1021 |
| PleI | GAGTC | 1 cut(s) | 139 |
| PpsI | GAGTC | 1 cut(s) | 139 |
| PsiI | TTATAA | 1 cut(s) | 524 |
| PspN4I | GGNNCC | 2 cut(s) | 662, 1037 |
| PspPI | GGNCC | 1 cut(s) | 246 |
| PspXI | VCTCGAGB | 2 cut(s) | 121, 763 |
| PsuI | RGATCY | 1 cut(s) | 607 |
| PvuII | CAGCTG | 1 cut(s) | 1019 |
| RseI | CAYNNNNRTG | 1 cut(s) | 649 |
| SapI | GCTCTTC | 1 cut(s) | 184 |
| SaqAI | TTAA | 3 cut(s) | 107, 197, 785 |
| SatI | GCNGC | 4 cut(s) | 222, 300, 481, 1020 |
| Sau3AI | GATC | 4 cut(s) | 552, 607, 692, 906 |
| Sau96I | GGNCC | 1 cut(s) | 246 |
| SchI | GAGTC | 1 cut(s) | 139 |
| SduI | GDGCHC | 1 cut(s) | 663 |
| SfaNI | GCATC | 3 cut(s) | 615, 823, 1032 |
| Sfr274I | CTCGAG | 2 cut(s) | 121, 763 |
| SinI | GGWCC | 1 cut(s) | 246 |
| SlaI | CTCGAG | 2 cut(s) | 121, 763 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 649 |
| SmlI | CTYRAG | 2 cut(s) | 121, 763 |
| SmoI | CTYRAG | 2 cut(s) | 121, 763 |
| SsiI | CCGC | 2 cut(s) | 481, 1033 |
| SspMI | CTAG | 1 cut(s) | 512 |
| StyI | CCWWGG | 1 cut(s) | 894 |
| TaaI | ACNGT | 3 cut(s) | 449, 508, 983 |
| TaqI | TCGA | 2 cut(s) | 122, 764 |
| TauI | GCSGC | 1 cut(s) | 483 |
| TfiI | GAWTC | 1 cut(s) | 578 |
| Tru1I | TTAA | 3 cut(s) | 107, 197, 785 |
| Tru9I | TTAA | 3 cut(s) | 107, 197, 785 |
| TscAI | CASTG | 2 cut(s) | 546, 982 |
| TseFI | GTSAC | 2 cut(s) | 502, 977 |
| TseI | GCWGC | 3 cut(s) | 221, 299, 1019 |
| Tsp45I | GTSAC | 2 cut(s) | 502, 977 |
| TspDTI | ATGAA | 7 cut(s) | 152, 384, 411, 458, 842, 867, 1040 |
| TspRI | CASTG | 2 cut(s) | 546, 982 |
| VpaK11BI | GGWCC | 1 cut(s) | 246 |
| XapI | RAATTY | 4 cut(s) | 114, 127, 285, 418 |
| XceI | RCATGY | 1 cut(s) | 732 |
| XhoI | CTCGAG | 2 cut(s) | 121, 763 |
| XspI | CTAG | 1 cut(s) | 512 |