pycom11g04130

26S protease regulatory subunit 6B

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
OG0002106
Physical Location & Seq
Forward (+)
3234026 .. 3237660
3635 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1266 bp
ATGGCACGGTCAGACATGGTGTTGGATCCTAAGCCCTTGCCGGAGCCACCGGCATCGATCCCCTCCATAAGATCCGACCTCCAGGGCTACACCGAGCAGAGCCAGGCCTCCGACGAGGATGATCTCTACAGCCGCCTCAAGACCTACCAGAGGCAGCTCGAGTTCATCGACATCCAGGAGGAGTACGTCAAGGATGAGCTGAAGAATTTGAAGCGCGAGCTCCTCCGCGCCCAGGAGGAGGTCAAGAGGATCCAATCGGTGCCGCTCGTCATCGGGCAGTTCATGGAGATGGTCGATCAGAATAACGGGATCGTGGGCTCCACCACTGGGTCCAATTACTACGTTAGGATTCTCAGCACCATCAATCGGGAGCTCCTAAAGCCTTCCGCTTCCGTCGCCTTGCACCGCCACTCCAATGCCCTCGTCGATGTTCTGCCTCCGGAGGCCGACTCGAGTATTTCCCTCCTCAGCCAGTCTGAGAAGCCCGACGTCACGTACTCTGATATTGGAGGATGTGACATTCAGAAGCAAGAAATTCGGGAAGCAGTAGAACTGCCACTTACTCATCACGAGTTATACAAACAGATTGGAATAGATCGCCCACGTGGTGTATTACTCTATGGTCCACCTGGAACTGGTAAAACCATGTTAGCAAAGGCTGTTGCTAATCATACTACTGCTGCCTTCATCAGAGTTGTTGGTTCAGAATTTGTTCAGAAGTATTTGGGAGAGGGTCCTCGCATGGTTCGTGATGTTTTCCGTCTTGCCAAGGAGAATGCTCCTGCCATCATCTTTATTGATGAGGTGGATGCTATTGCTACTGCAAGGTTTGATGCTCAAACTGGAGCTGACAGAGAAGTTCAGCGAATCCTCATGGAGCTCCTTAATCAGATGGATGGGTTTGACCAGACAGTGAATGTTAAGGTTATTATGGCTACTAACCGAGCAGACACCTTGGATCCTGCACTTCTACGTCCTGGAAGGCAGATCGATCGAAAGATTGAGTTTCCTTTGCCCGATAGGAGGCAGAAAAGACTTGTTTTCCAGGTTTGCACTGCTAAAATGAACTTGAGTGATGAGGTAGACTTGGAAGATTATGTCTCTCGGCCAGACAAAATCAGTGCTGCTGAGATTTCTGCTATATGTCAAGAAGCAGGAATGCATGCAGTCCGGAAGAACCGGTATGTCATACTCCCGAAGGACTTTGAGAAGGGTTACCAAACCAACGTGAAGAAGCCCGACACTGACTTTGAATTCTACAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000502 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005911 GO:0006355 GO:0006357 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0008134 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009506 GO:0009889 GO:0009891 GO:0009893 GO:0009894 GO:0009896 GO:0009987 GO:0010033 GO:0010243 GO:0010468 GO:0010498 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017025 GO:0017111 GO:0019219 GO:0019222 GO:0019538 GO:0019941 GO:0030054 GO:0030162 GO:0030163 GO:0030312 GO:0030433 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031329 GO:0031331 GO:0031334 GO:0031595 GO:0031597 GO:0031974 GO:0031981 GO:0032268 GO:0032270 GO:0032991 GO:0033554 GO:0034976 GO:0036402 GO:0036503 GO:0042176 GO:0042221 GO:0042623 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043254 GO:0043632 GO:0044087 GO:0044089 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045732 GO:0045862 GO:0045893 GO:0045898 GO:0045899 GO:0045935 GO:0045944 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051128 GO:0051130 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0051252 GO:0051254 GO:0051603 GO:0051716 GO:0055044 GO:0060255 GO:0060260 GO:0060261 GO:0061136 GO:0065007 GO:0070013 GO:0071704 GO:0071944 GO:0080090 GO:1901564 GO:1901565 GO:1901575 GO:1901698 GO:1901800 GO:1902494 GO:1902680 GO:1903050 GO:1903052 GO:1903362 GO:1903364 GO:1903506 GO:1903508 GO:1905368 GO:1905369 GO:2000112 GO:2000142 GO:2000144 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko03050 ko05169 map03050 map05169
Pfam Domains
Protein Families
AAA

Protein Analysis

422

Amino Acids

47.57

Weight (kDa)

5.42

Isoelectric Point (pI)

38.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Prot_ATP_ID_OB_C PF16450 91 - 146 8.8e-12 Proteasomal ATPase OB C-terminal domain
AAA_16 PF13191 191 - 238 2.1e-06 AAA ATPase domain
AAA_5 PF07728 203 - 324 7.1e-08 AAA domain (dynein-related subfamily)
AAA PF00004 204 - 338 3.6e-43 ATPase family associated with various cellular activities (AAA)
AAA_2 PF07724 204 - 297 3.4e-06 AAA domain (Cdc48 subfamily)
AAA_lid_3 PF17862 361 - 404 6e-07 AAA+ lid domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 492
AccB1I GGYRCC 1 cut(s) 259
AccBSI CCGCTC 1 cut(s) 265
AccI GTMKAC 1 cut(s) 1083
AccII CGCG 2 cut(s) 216, 228
AccIII TCCGGA 2 cut(s) 439, 1170
AciI CCGC 5 cut(s) 133, 226, 263, 387, 406
AclWI GGATC 9 cut(s) 20, 33, 52, 66, 244, 257, 317, 953, 966
AcoI YGGCCR 1 cut(s) 1106
AcsI RAATTY 4 cut(s) 205, 534, 707, 1253
AcuI CTGAAG 1 cut(s) 221
AcvI CACGTG 1 cut(s) 605
AcyI GRCGYC 1 cut(s) 489
AdeI CACNNNGTG 1 cut(s) 608
AfaI GTAC 2 cut(s) 185, 497
AfiI CCNNNNNNNGG 7 cut(s) 150, 232, 238, 327, 366, 635, 1023
AgeI ACCGGT 1 cut(s) 1179
AgsI TTSAA 2 cut(s) 211, 1253
AjnI CCWGG 7 cut(s) 81, 102, 174, 231, 628, 976, 1044
AluBI AGCT 6 cut(s) 157, 199, 220, 373, 848, 880
AluI AGCT 6 cut(s) 157, 199, 220, 373, 848, 880
Alw21I GWGCWC 3 cut(s) 222, 375, 882
Alw26I GTCTC 1 cut(s) 1105
AlwI GGATC 9 cut(s) 20, 33, 52, 66, 244, 257, 317, 953, 966
Ama87I CYCGRG 2 cut(s) 158, 451
Aor13HI TCCGGA 2 cut(s) 439, 1170
AoxI GGCC 3 cut(s) 105, 444, 1106
ApeKI GCWGC 3 cut(s) 154, 680, 1124
ApoI RAATTY 4 cut(s) 205, 534, 707, 1253
ArsI GACNNNNNNTTYG 2 cut(s) 1232, 1264
AsiGI ACCGGT 1 cut(s) 1179
Asp700I GAANNNNTTC 1 cut(s) 711
AspLEI GCGC 2 cut(s) 216, 230
AspS9I GGNCC 3 cut(s) 330, 623, 734
AvaI CYCGRG 2 cut(s) 158, 451
AvaII GGWCC 3 cut(s) 330, 623, 734
BamHI GGATCC 3 cut(s) 25, 249, 958
BanI GGYRCC 1 cut(s) 259
BanII GRGCYC 4 cut(s) 222, 320, 375, 882
BauI CACGAG 1 cut(s) 569
BbrPI CACGTG 1 cut(s) 605
Bbv12I GWGCWC 3 cut(s) 222, 375, 882
BbvCI CCTCAGC 1 cut(s) 467
BbvI GCAGC 3 cut(s) 166, 667, 1111
BccI CCATC 5 cut(s) 283, 368, 794, 886, 890
BcgI CGANNNNNNTGC 4 cut(s) 518, 552, 974, 1008
BciT130I CCWGG 7 cut(s) 83, 104, 176, 233, 630, 978, 1046
BcoDI GTCTC 1 cut(s) 1105
BfmI CTRYAG 1 cut(s) 127
BisI GCNGC 5 cut(s) 133, 155, 263, 681, 1125
BlsI GCNGC 5 cut(s) 134, 156, 264, 682, 1126
Bme1390I CCNGG 7 cut(s) 83, 104, 176, 233, 630, 978, 1046
Bme18I GGWCC 3 cut(s) 330, 623, 734
BmeT110I CYCGRG 2 cut(s) 158, 451
BmgT120I GGNCC 3 cut(s) 330, 623, 734
BmiI GGNNCC 8 cut(s) 27, 45, 251, 261, 319, 331, 735, 960
BmrFI CCNGG 7 cut(s) 83, 104, 176, 233, 630, 978, 1046
BmrI ACTGGG 1 cut(s) 336
BmsI GCATC 3 cut(s) 62, 799, 823
BmuI ACTGGG 1 cut(s) 336
BplI GAGNNNNNCTC 2 cut(s) 434, 466
BpmI CTGGAG 2 cut(s) 65, 864
Bpu10I CCTNAGC 2 cut(s) 30, 467
BpuEI CTTGAG 2 cut(s) 122, 1090
Bsa29I ATCGAT 2 cut(s) 56, 990
BsaAI YACGTR 2 cut(s) 495, 605
BsaHI GRCGYC 1 cut(s) 489
BsaJI CCNNGG 4 cut(s) 82, 231, 768, 954
BsaWI WCCGGW 3 cut(s) 439, 1170, 1179
BsaXI ACNNNNNCTCC 2 cut(s) 395, 425
Bsc4I CCNNNNNNNGG 7 cut(s) 150, 232, 238, 327, 366, 635, 1023
Bse118I RCCGGY 2 cut(s) 49, 1179
Bse1I ACTGG 4 cut(s) 331, 472, 640, 847
BseAI TCCGGA 2 cut(s) 439, 1170
BseBI CCWGG 7 cut(s) 83, 104, 176, 233, 630, 978, 1046
BseCI ATCGAT 2 cut(s) 56, 990
BseDI CCNNGG 4 cut(s) 82, 231, 768, 954
BseGI GGATG 6 cut(s) 124, 171, 199, 518, 814, 901
BseLI CCNNNNNNNGG 7 cut(s) 150, 232, 238, 327, 366, 635, 1023
BseMII CTCAG 4 cut(s) 367, 468, 481, 1119
BseNI ACTGG 4 cut(s) 331, 472, 640, 847
BseRI GAGGAG 4 cut(s) 194, 212, 251, 455
BseXI GCAGC 3 cut(s) 166, 667, 1111
BsgI GTGCAG 1 cut(s) 948
Bsh1236I CGCG 2 cut(s) 216, 228
Bsh1285I CGRYCG 1 cut(s) 994
BshFI GGCC 3 cut(s) 107, 446, 1108
BshNI GGYRCC 1 cut(s) 259
BshTI ACCGGT 1 cut(s) 1179
BshVI ATCGAT 2 cut(s) 56, 990
BsiEI CGRYCG 1 cut(s) 994
BsiHKAI GWGCWC 3 cut(s) 222, 375, 882
BsiHKCI CYCGRG 2 cut(s) 158, 451
BsiSI CCGG 5 cut(s) 41, 50, 440, 1171, 1180
BslI CCNNNNNNNGG 7 cut(s) 150, 232, 238, 327, 366, 635, 1023
BsmAI GTCTC 1 cut(s) 1105
BsmI GAATGC 2 cut(s) 781, 1164
BsnI GGCC 3 cut(s) 107, 446, 1108
BsoBI CYCGRG 2 cut(s) 158, 451
Bsp1286I GDGCHC 4 cut(s) 222, 320, 375, 882
Bsp13I TCCGGA 2 cut(s) 439, 1170
BspACI CCGC 5 cut(s) 133, 226, 263, 387, 406
BspANI GGCC 3 cut(s) 107, 446, 1108
BspCNI CTCAG 4 cut(s) 366, 469, 480, 1120
BspDI ATCGAT 2 cut(s) 56, 990
BspEI TCCGGA 2 cut(s) 439, 1170
BspFNI CGCG 2 cut(s) 216, 228
BspLI GGNNCC 8 cut(s) 27, 45, 251, 261, 319, 331, 735, 960
BspPI GGATC 9 cut(s) 20, 33, 52, 66, 244, 257, 317, 953, 966
BspT107I GGYRCC 1 cut(s) 259
BsrBI CCGCTC 1 cut(s) 265
BsrFI RCCGGY 2 cut(s) 49, 1179
BsrI ACTGG 4 cut(s) 331, 472, 640, 847
BssAI RCCGGY 2 cut(s) 49, 1179
BssECI CCNNGG 4 cut(s) 82, 231, 768, 954
BssNI GRCGYC 1 cut(s) 489
BssSI CACGAG 1 cut(s) 569
BssT1I CCWWGG 2 cut(s) 768, 954
Bst2BI CACGAG 1 cut(s) 569
Bst2UI CCWGG 7 cut(s) 83, 104, 176, 233, 630, 978, 1046
Bst4CI ACNGT 2 cut(s) 9, 913
BstACI GRCGYC 1 cut(s) 489
BstBAI YACGTR 2 cut(s) 495, 605
BstC8I GCNNGC 2 cut(s) 218, 1164
BstDEI CTNAG 5 cut(s) 30, 353, 467, 477, 1128
BstEII GGTNACC 1 cut(s) 1214
BstENI CCTNNNNNAGG 1 cut(s) 148
BstF5I GGATG 6 cut(s) 124, 171, 199, 518, 814, 901
BstFNI CGCG 2 cut(s) 216, 228
BstHHI GCGC 2 cut(s) 216, 230
BstMAI GTCTC 1 cut(s) 1105
BstMCI CGRYCG 1 cut(s) 994
BstMWI GCNNNNNNNGC 2 cut(s) 379, 395
BstNI CCWGG 7 cut(s) 83, 104, 176, 233, 630, 978, 1046
BstNSI RCATGY 1 cut(s) 1166
BstPI GGTNACC 1 cut(s) 1214
BstSCI CCNGG 7 cut(s) 81, 102, 174, 231, 628, 976, 1044
BstSFI CTRYAG 1 cut(s) 127
BstUI CGCG 2 cut(s) 216, 228
BstV1I GCAGC 3 cut(s) 166, 667, 1111
BstX2I RGATCY 4 cut(s) 25, 71, 249, 958
BstYI RGATCY 4 cut(s) 25, 71, 249, 958
Bsu15I ATCGAT 2 cut(s) 56, 990
BsuRI GGCC 3 cut(s) 107, 446, 1108
BsuTUI ATCGAT 2 cut(s) 56, 990
BtsCI GGATG 6 cut(s) 124, 171, 199, 518, 814, 901
BtsI GCAGTG 1 cut(s) 1053
BtsIMutI CAGTG 5 cut(s) 324, 918, 1053, 1126, 1242
Cac8I GCNNGC 2 cut(s) 218, 1164
CfoI GCGC 2 cut(s) 216, 230
Cfr10I RCCGGY 2 cut(s) 49, 1179
Cfr13I GGNCC 3 cut(s) 330, 623, 734
ClaI ATCGAT 2 cut(s) 56, 990
Csp6I GTAC 2 cut(s) 184, 496
CspAI ACCGGT 1 cut(s) 1179
CviAII CATG 6 cut(s) 16, 283, 646, 742, 874, 1163
CviQI GTAC 2 cut(s) 184, 496
DdeI CTNAG 5 cut(s) 30, 353, 467, 477, 1128
DraIII CACNNNGTG 1 cut(s) 608
EaeI YGGCCR 1 cut(s) 1106
Ecl136II GAGCTC 3 cut(s) 220, 373, 880
Eco130I CCWWGG 2 cut(s) 768, 954
Eco147I AGGCCT 1 cut(s) 107
Eco24I GRGCYC 4 cut(s) 222, 320, 375, 882
Eco47I GGWCC 3 cut(s) 330, 623, 734
Eco53kI GAGCTC 3 cut(s) 220, 373, 880
Eco57I CTGAAG 1 cut(s) 221
Eco72I CACGTG 1 cut(s) 605
Eco88I CYCGRG 2 cut(s) 158, 451
Eco91I GGTNACC 1 cut(s) 1214
EcoICRI GAGCTC 3 cut(s) 220, 373, 880
EcoNI CCTNNNNNAGG 1 cut(s) 148
EcoO109I RGGNCCY 1 cut(s) 734
EcoO65I GGTNACC 1 cut(s) 1214
EcoRI GAATTC 1 cut(s) 1253
EcoRII CCWGG 7 cut(s) 81, 102, 174, 231, 628, 976, 1044
EcoT14I CCWWGG 2 cut(s) 768, 954
EcoT22I ATGCAT 1 cut(s) 1164
EcoT38I GRGCYC 4 cut(s) 222, 320, 375, 882
ErhI CCWWGG 2 cut(s) 768, 954
FaeI CATG 6 cut(s) 19, 286, 649, 745, 877, 1166
FatI CATG 6 cut(s) 15, 282, 645, 741, 873, 1162
FblI GTMKAC 1 cut(s) 1083
Fnu4HI GCNGC 5 cut(s) 133, 155, 263, 681, 1125
FokI GGATG 6 cut(s) 131, 158, 206, 525, 821, 908
FriOI GRGCYC 4 cut(s) 222, 320, 375, 882
Fsp4HI GCNGC 5 cut(s) 133, 155, 263, 681, 1125
GlaI GCGC 2 cut(s) 215, 229
GluI GCNGC 5 cut(s) 133, 155, 263, 681, 1125
GsuI CTGGAG 2 cut(s) 65, 864
HaeIII GGCC 3 cut(s) 107, 446, 1108
HapII CCGG 5 cut(s) 41, 50, 440, 1171, 1180
HhaI GCGC 2 cut(s) 216, 230
Hin1I GRCGYC 1 cut(s) 489
Hin1II CATG 6 cut(s) 19, 286, 649, 745, 877, 1166
Hin6I GCGC 2 cut(s) 214, 228
HinP1I GCGC 2 cut(s) 214, 228
HinfI GANTC 3 cut(s) 349, 449, 867
HpaII CCGG 5 cut(s) 41, 50, 440, 1171, 1180
Hpy166II GTNNAC 2 cut(s) 626, 1084
Hpy8I GTNNAC 2 cut(s) 626, 1084
Hpy99I CGWCG 4 cut(s) 116, 398, 428, 491
HpyAV CCTTC 5 cut(s) 393, 694, 975, 1192, 1204
HpyCH4III ACNGT 2 cut(s) 9, 913
HpyCH4IV ACGT 7 cut(s) 186, 342, 489, 494, 604, 973, 1227
HpyCH4V TGCA 6 cut(s) 403, 824, 965, 1053, 1162, 1166
HpyF10VI GCNNNNNNNGC 2 cut(s) 379, 395
HpyF3I CTNAG 5 cut(s) 30, 353, 467, 477, 1128
HpySE526I ACGT 7 cut(s) 186, 342, 489, 494, 604, 973, 1227
Hsp92I GRCGYC 1 cut(s) 489
Hsp92II CATG 6 cut(s) 19, 286, 649, 745, 877, 1166
HspAI GCGC 2 cut(s) 214, 228
Kpn2I TCCGGA 2 cut(s) 439, 1170
LmnI GCTCC 9 cut(s) 43, 225, 323, 370, 378, 784, 845, 877, 885
Lsp1109I GCAGC 3 cut(s) 166, 667, 1111
LweI GCATC 3 cut(s) 62, 799, 823
MaeII ACGT 7 cut(s) 186, 342, 489, 494, 604, 973, 1227
MaeIII GTNAC 3 cut(s) 490, 515, 1214
MbiI CCGCTC 1 cut(s) 265
MboII GAAGA 4 cut(s) 214, 1103, 1186, 1243
MflI RGATCY 4 cut(s) 25, 71, 249, 958
MhlI GDGCHC 4 cut(s) 222, 320, 375, 882
MluCI AATT 5 cut(s) 205, 334, 534, 707, 1253
MlyI GAGTC 1 cut(s) 443
MmeI TCCRAC 2 cut(s) 99, 135
Mph1103I ATGCAT 1 cut(s) 1164
MroI TCCGGA 2 cut(s) 439, 1170
MroXI GAANNNNTTC 1 cut(s) 711
MseI TTAA 2 cut(s) 885, 921
MslI CAYNNNNRTG 2 cut(s) 287, 414
MspI CCGG 5 cut(s) 41, 50, 440, 1171, 1180
MspR9I CCNGG 7 cut(s) 83, 104, 176, 233, 630, 978, 1046
Mva1269I GAATGC 2 cut(s) 781, 1164
MvaI CCWGG 7 cut(s) 83, 104, 176, 233, 630, 978, 1046
MvnI CGCG 2 cut(s) 216, 228
MwoI GCNNNNNNNGC 2 cut(s) 379, 395
NlaIII CATG 6 cut(s) 19, 286, 649, 745, 877, 1166
NlaIV GGNNCC 8 cut(s) 27, 45, 251, 261, 319, 331, 735, 960
NmeAIII GCCGAG 1 cut(s) 1084
NmuCI GTSAC 2 cut(s) 490, 515
NsiI ATGCAT 1 cut(s) 1164
NspI RCATGY 1 cut(s) 1166
PaeI GCATGC 1 cut(s) 1166
PaeR7I CTCGAG 2 cut(s) 158, 451
PceI AGGCCT 1 cut(s) 107
PcsI WCGNNNNNNNCGW 2 cut(s) 165, 745
PctI GAATGC 2 cut(s) 781, 1164
PdmI GAANNNNTTC 1 cut(s) 711
PfeI GAWTC 2 cut(s) 349, 867
PfoI TCCNGGA 2 cut(s) 174, 976
PinAI ACCGGT 1 cut(s) 1179
PkrI GCNGC 5 cut(s) 134, 156, 264, 682, 1126
Ple19I CGATCG 1 cut(s) 994
PleI GAGTC 1 cut(s) 443
PmaCI CACGTG 1 cut(s) 605
PmlI CACGTG 1 cut(s) 605
PpsI GAGTC 1 cut(s) 443
Ppu21I YACGTR 2 cut(s) 495, 605
PpuMI RGGWCCY 1 cut(s) 734
Psp124BI GAGCTC 3 cut(s) 222, 375, 882
Psp5II RGGWCCY 1 cut(s) 734
Psp6I CCWGG 7 cut(s) 81, 102, 174, 231, 628, 976, 1044
PspCI CACGTG 1 cut(s) 605
PspEI GGTNACC 1 cut(s) 1214
PspGI CCWGG 7 cut(s) 81, 102, 174, 231, 628, 976, 1044
PspN4I GGNNCC 8 cut(s) 27, 45, 251, 261, 319, 331, 735, 960
PspPI GGNCC 3 cut(s) 330, 623, 734
PspPPI RGGWCCY 1 cut(s) 734
PspXI VCTCGAGB 2 cut(s) 158, 451
PsuI RGATCY 4 cut(s) 25, 71, 249, 958
PvuI CGATCG 1 cut(s) 994
RsaI GTAC 2 cut(s) 185, 497
RsaNI GTAC 2 cut(s) 184, 496
RseI CAYNNNNRTG 2 cut(s) 287, 414
SacI GAGCTC 3 cut(s) 222, 375, 882
SaqAI TTAA 2 cut(s) 885, 921
SatI GCNGC 5 cut(s) 133, 155, 263, 681, 1125
Sau96I GGNCC 3 cut(s) 330, 623, 734
SchI GAGTC 1 cut(s) 443
ScrFI CCNGG 7 cut(s) 83, 104, 176, 233, 630, 978, 1046
SduI GDGCHC 4 cut(s) 222, 320, 375, 882
SfaNI GCATC 3 cut(s) 62, 799, 823
SfcI CTRYAG 1 cut(s) 127
Sfr274I CTCGAG 2 cut(s) 158, 451
SinI GGWCC 3 cut(s) 330, 623, 734
SlaI CTCGAG 2 cut(s) 158, 451
SmiMI CAYNNNNRTG 2 cut(s) 287, 414
SmlI CTYRAG 4 cut(s) 137, 158, 451, 1069
SmoI CTYRAG 4 cut(s) 137, 158, 451, 1069
SphI GCATGC 1 cut(s) 1166
Sse9I AATT 5 cut(s) 205, 334, 534, 707, 1253
SseBI AGGCCT 1 cut(s) 107
SsiI CCGC 5 cut(s) 133, 226, 263, 387, 406
SstI GAGCTC 3 cut(s) 222, 375, 882
StuI AGGCCT 1 cut(s) 107
StyD4I CCNGG 7 cut(s) 81, 102, 174, 231, 628, 976, 1044
StyI CCWWGG 2 cut(s) 768, 954
TaaI ACNGT 2 cut(s) 9, 913
TaiI ACGT 7 cut(s) 189, 345, 492, 497, 607, 976, 1230
TaqI TCGA 8 cut(s) 56, 159, 168, 294, 426, 452, 990, 994
TasI AATT 5 cut(s) 205, 334, 534, 707, 1253
TauI GCSGC 2 cut(s) 135, 265
TfiI GAWTC 2 cut(s) 349, 867
Tru1I TTAA 2 cut(s) 885, 921
Tru9I TTAA 2 cut(s) 885, 921
TscAI CASTG 5 cut(s) 331, 918, 1060, 1126, 1249
TseFI GTSAC 2 cut(s) 490, 515
TseI GCWGC 3 cut(s) 154, 680, 1124
Tsp45I GTSAC 2 cut(s) 490, 515
TspDTI ATGAA 4 cut(s) 154, 271, 676, 1079
TspGWI ACGGA 2 cut(s) 382, 749
TspRI CASTG 5 cut(s) 331, 918, 1060, 1126, 1249
VpaK11BI GGWCC 3 cut(s) 330, 623, 734
XagI CCTNNNNNAGG 1 cut(s) 148
XapI RAATTY 4 cut(s) 205, 534, 707, 1253
XceI RCATGY 1 cut(s) 1166
XhoI CTCGAG 2 cut(s) 158, 451
XmiI GTMKAC 1 cut(s) 1083
XmnI GAANNNNTTC 1 cut(s) 711
ZraI GACGTC 1 cut(s) 490
Zsp2I ATGCAT 1 cut(s) 1164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.