Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr11

Orthogroup ID

OG0004162

Physical Location & Seq

Genomic Coordinates Forward (+)

6211582 .. 6214400

Gene Structure 2819 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1674 bp

ATGGCGCAGTCGAAGCCAATCGAAATGGACCCGGATATGACCGAGAAGGAAAAGCTCGAGTATTTTCGGAACCAGGAGAAGGATTACAAGAGAAGGATTGATAGGGCGAGGCCGTGTTTGTTGCCGGCGCCTGTGCAGAGGGAGGTATTGCTGATGTTGAGAGAACAAGGGAAGGTGAGCGCAAGGCTGTTGCAGAAGATTCGAGACCGGGTTCAGAAGTGGTACCAGGATGAAGGGTATGCTTGTGCACAGGTGGTGAATTTTGGGAATTTGAATACCAAGGAGGTGGTTTGTGAGGTTGTGGAAGGGGATATCACTCAGCTGCTTATTCAGTTCCAGGATAAGCTGGGGAACTTTGTCGAAGGGAACACGCAGATCCCCGTGGTGAAGAGGGAATTGCCTAGACAGCTTCGACCGGGTTATGTTTTCAACATAGAAGCAGGGAAACAAGCTCTGAGGAACATAAATTCCCTAGCTTTGTTTTCAAACATTGAAGTGAACCCACGGCCTGACGAGAAGAACGAAGGAGGTATAATTGTTGAAATAAAGCTTAAAGAACTAGAACAGAAGACAGCTGAACTTAACACGGAATGGAACATTGTTCCTGGACGTGGAGGTTATCCGACGCTTGCTTCACTAGAGCCTGGTGGCACTGTTACATTTGAACATCGGAATCTCGGTGGCCTGAATAGATCTATTCTCGGGTCAATAACCACCAGCAACTTCTTGAATCCTCAGGATGATCTTGCTTTCAAGCTTGAGTATGTGCATCCATATCTGGATGGTGTATACAATCCCCGCAATCGTGCTCTCCGTGTAAGCTGCTTCAACAGCCGAAAACTAAGTCCAGTCTTTACTGGTGGGCCAGGGGCCGATGAAGTACCACCTATTTGGGTTGATCGAGCTGGAGTTAAGGCTAATATAACAGAGAATTTCACCCGTCAGAGCAAATTCACCTATGGACTTGTGGTGGAAGAGATAACCACGCGTGATGAACGCAGTCATGTCTGTTCTAATGGTCAAAGAGTGTTGCCAAATGGAGGAGTAAGTGAAGATGGACCTCCAACAACTCTCAGTGGTACAGGCATTGACCGCGTGGCATTTTTACAATCAAATATCACTCGTGATAACACTAAATTTGTGAATGGAGCTATAGTTGGTCAGAGGAATGTTTTTCAGGTTGACCAAGGTGTTGGCGTGGGCAGCAACTTTCCATTCTTCAACCGTCACCAGCTAACATTAACCAGATTTTTCCAGCTGAAGGAAGTCGAGGAAGGTGCTGGTAAACCACCACCGCCTGTCCTTGTACTTCACGGACACTATGGTGGCTGTATAGGAGACCTTCCAAGTTATGATACATTTACCCTTGGCGGTCCATATTCTGTGAGGGGTTACAACATGGGCGAGATAGGCGCAGCTAGAAACATCCTTGAGCTTGCTGCTGAGCTACGGATACCTGTGAAAGGTACACATGTATATGCATTTGCAGAACACGGAAATGACCTAGGAACTTCCAAGGAAGTCAAGGGTAACCCAACAGAGGTATACAGGCGATTGGGTCACGGGTCAGCTTATGGTGTTGGCGTAAAGTTAGGTTTAGTGAGAGCTGAGTATGCCGTCGACCATAACTCCGGCACAGGTGCATTATTCTTCCGTTTTGGCGAGAGGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0006605 GO:0006810 GO:0006886 GO:0006996 GO:0007275 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009653 GO:0009657 GO:0009658 GO:0009662 GO:0009707 GO:0009719 GO:0009725 GO:0009735 GO:0009790 GO:0009941 GO:0009987 GO:0010006 GO:0010033 GO:0015031 GO:0015833 GO:0016020 GO:0016021 GO:0016043 GO:0017038 GO:0019867 GO:0031090 GO:0031224 GO:0031300 GO:0031301 GO:0031350 GO:0031351 GO:0031354 GO:0031355 GO:0031358 GO:0031359 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0042170 GO:0042221 GO:0042886 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044434 GO:0044435 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0048598 GO:0048856 GO:0050896 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0055085 GO:0061927 GO:0065002 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0071840 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098796 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Bac_surface_Ag

Protein Analysis

558

Amino Acids

61.95

Weight (kDa)

8.07

Isoelectric Point (pI)

37.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
POTRA2_Toc75	PF25280	1 - 104	8.4e-53	Toc75-like, second POTRA domain
POTRA1_3_Toc75	PF25282	105 - 186	5.8e-30	Toc75-like, POTRA domain
Omp85	PF01103	225 - 557	7.6e-21	Omp85 superfamily domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004162)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G46740 AT4G09080 AT4G09080 AT4G09080
fragaria_vesca	FvH4_3g28760 FvH4_3g28760 FvH4_3g28760 FvH4_5g29410
malus_domestica	MD03G1086500.v1.1 MD11G1095600.v1.1
prunus_persica	Prupe.6G071100_v2.0.a1
pyrus_communis	pycom03g06860 pycom11g08100 pycom11g08110
rosa_chinensis	RchiOBHm_Chr5g0052291 RchiOBHm_Chr7g0222311
rosa_laevigata	RLG00000002071 RLG00000034828
rosa_multiflora	Rmu_sc0007069.1_g000009 Rmu_sc0028377.1_g000001 Rmu_sc0032875.1_g000001 Rmu_sc0032876.1_g000001
rosa_roxburghii	Rroxscaffold_1G00028120 Rroxscaffold_3G00237120
rosa_rugosa	Rorug05G0273100 Rorug07G0207600
rosa_samantha	Rh5CG382000 Rh5DG371900 Rh7AG349900 Rh7DG346100
rosa_wichuraiana	Rw5G032630 Rw5G032670 Rw7G029530

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	222
AccB1I	GGYRCC	2 cut(s)	127, 222
AccI	GTMKAC	3 cut(s)	789, 1545, 1620
AccII	CGCG	2 cut(s)	988, 1095
AciI	CCGC	4 cut(s)	799, 1093, 1295, 1371
AclWI	GGATC	1 cut(s)	370
AcsI	RAATTY	6 cut(s)	259, 268, 466, 931, 950, 1136
AcuI	CTGAAG	1 cut(s)	1280
AcyI	GRCGYC	1 cut(s)	128
AfaI	GTAC	5 cut(s)	224, 882, 1081, 1308, 1468
AfiI	CCNNNNNNNGG	6 cut(s)	79, 611, 1040, 1261, 1463, 1540
AflIII	ACRYGT	2 cut(s)	986, 1471
AjiI	CACGTC	1 cut(s)	611
AjnI	CCWGG	6 cut(s)	72, 225, 336, 604, 643, 865
AleI	CACNNNNGTG	1 cut(s)	1323
AloI	GAACNNNNNNTCC	2 cut(s)	452, 484
Alw21I	GWGCWC	2 cut(s)	250, 811
Alw26I	GTCTC	2 cut(s)	198, 1332
Alw44I	GTGCAC	1 cut(s)	246
AlwI	GGATC	1 cut(s)	370
Ama87I	CYCGRG	2 cut(s)	56, 701
AoxI	GGCC	5 cut(s)	110, 506, 682, 863, 870
ApaLI	GTGCAC	1 cut(s)	246
ApeKI	GCWGC	5 cut(s)	322, 822, 1203, 1415, 1439
ApoI	RAATTY	6 cut(s)	259, 268, 466, 931, 950, 1136
ArsI	GACNNNNNNTTYG	2 cut(s)	829, 861
Asp718I	GGTACC	1 cut(s)	222
AspA2I	CCTAGG	1 cut(s)	1504
AspLEI	GCGC	4 cut(s)	7, 130, 182, 1415
AspS9I	GGNCC	5 cut(s)	28, 863, 870, 1058, 1373
AsuC2I	CCSGG	3 cut(s)	32, 209, 417
AsuHPI	GGTGA	6 cut(s)	187, 268, 397, 928, 946, 1220
AvaI	CYCGRG	2 cut(s)	56, 701
AvaII	GGWCC	3 cut(s)	28, 1058, 1373
AvrII	CCTAGG	1 cut(s)	1504
AxyI	CCTNAGG	1 cut(s)	735
BaeGI	GKGCMC	1 cut(s)	250
BaeI	ACNNNNGTAYC	2 cut(s)	1458, 1491
BanI	GGYRCC	2 cut(s)	127, 222
BauI	CACGAG	1 cut(s)	1122
BbsI	GAAGAC	1 cut(s)	575
Bbv12I	GWGCWC	2 cut(s)	250, 811
BbvI	GCAGC	5 cut(s)	309, 809, 1215, 1426, 1427
BccI	CCATC	2 cut(s)	776, 1049
BceAI	ACGGC	3 cut(s)	97, 521, 1601
BcgI	CGANNNNNNTGC	4 cut(s)	182, 216, 1259, 1293
BciT130I	CCWGG	6 cut(s)	74, 227, 338, 606, 645, 867
BciVI	GTATCC	1 cut(s)	1446
BcnI	CCSGG	3 cut(s)	32, 209, 417
BcoDI	GTCTC	2 cut(s)	198, 1332
BfaI	CTAG	6 cut(s)	402, 473, 560, 638, 1419, 1505
BfmI	CTRYAG	1 cut(s)	1152
BfoI	RGCGCY	1 cut(s)	131
BfuI	GTATCC	1 cut(s)	1446
BglII	AGATCT	1 cut(s)	692
BisI	GCNGC	5 cut(s)	323, 823, 1204, 1416, 1440
BlnI	CCTAGG	1 cut(s)	1504
BlpI	GCTNAGC	1 cut(s)	1443
BlsI	GCNGC	5 cut(s)	324, 824, 1205, 1417, 1441
Bme1390I	CCNGG	9 cut(s)	32, 74, 209, 227, 338, 417, 606, 645, 867
Bme18I	GGWCC	3 cut(s)	28, 1058, 1373
BmeT110I	CYCGRG	2 cut(s)	56, 701
BmgBI	CACGTC	1 cut(s)	611
BmgT120I	GGNCC	5 cut(s)	28, 863, 870, 1058, 1373
BmiI	GGNNCC	5 cut(s)	30, 71, 129, 224, 871
BmrFI	CCNGG	9 cut(s)	32, 74, 209, 227, 338, 417, 606, 645, 867
BmsI	GCATC	1 cut(s)	778
BpiI	GAAGAC	1 cut(s)	575
BpmI	CTGGAG	1 cut(s)	927
Bpu1102I	GCTNAGC	1 cut(s)	1443
BpuEI	CTTGAG	2 cut(s)	779, 1451
BpuMI	CCSGG	3 cut(s)	32, 209, 417
BsaHI	GRCGYC	1 cut(s)	128
BsaI	GGTCTC	2 cut(s)	198, 1332
BsaJI	CCNNGG	8 cut(s)	279, 381, 503, 866, 1186, 1366, 1504, 1515
BsaXI	ACNNNNNCTCC	4 cut(s)	1140, 1170, 1613, 1643
Bsc4I	CCNNNNNNNGG	6 cut(s)	79, 611, 1040, 1261, 1463, 1540
Bse118I	RCCGGY	1 cut(s)	124
Bse1I	ACTGG	2 cut(s)	848, 862
Bse21I	CCTNAGG	1 cut(s)	735
BseBI	CCWGG	6 cut(s)	74, 227, 338, 606, 645, 867
BseDI	CCNNGG	8 cut(s)	279, 381, 503, 866, 1186, 1366, 1504, 1515
BseGI	GGATG	5 cut(s)	235, 745, 769, 787, 1425
BseLI	CCNNNNNNNGG	6 cut(s)	79, 611, 1040, 1261, 1463, 1540
BseMII	CTCAG	6 cut(s)	332, 446, 749, 1087, 1434, 1599
BseNI	ACTGG	2 cut(s)	848, 862
BseRI	GAGGAG	1 cut(s)	1056
BseSI	GKGCMC	1 cut(s)	250
BseXI	GCAGC	5 cut(s)	309, 809, 1215, 1426, 1427
BseYI	CCCAGC	1 cut(s)	346
BsgI	GTGCAG	1 cut(s)	155
Bsh1236I	CGCG	2 cut(s)	988, 1095
Bsh1285I	CGRYCG	1 cut(s)	416
BshFI	GGCC	5 cut(s)	112, 508, 684, 865, 872
BshNI	GGYRCC	2 cut(s)	127, 222
BsiEI	CGRYCG	1 cut(s)	416
BsiHKAI	GWGCWC	2 cut(s)	250, 811
BsiHKCI	CYCGRG	2 cut(s)	56, 701
BsiSI	CCGG	5 cut(s)	32, 125, 208, 416, 1632
BslI	CCNNNNNNNGG	6 cut(s)	79, 611, 1040, 1261, 1463, 1540
BsmAI	GTCTC	2 cut(s)	198, 1332
BsnI	GGCC	5 cut(s)	112, 508, 684, 865, 872
Bso31I	GGTCTC	2 cut(s)	198, 1332
BsoBI	CYCGRG	2 cut(s)	56, 701
Bsp1286I	GDGCHC	2 cut(s)	250, 811
Bsp143I	GATC	4 cut(s)	375, 692, 742, 898
Bsp1720I	GCTNAGC	1 cut(s)	1443
BspACI	CCGC	4 cut(s)	799, 1093, 1295, 1371
BspANI	GGCC	5 cut(s)	112, 508, 684, 865, 872
BspCNI	CTCAG	6 cut(s)	331, 447, 748, 1086, 1435, 1600
BspFNI	CGCG	2 cut(s)	988, 1095
BspLI	GGNNCC	5 cut(s)	30, 71, 129, 224, 871
BspPI	GGATC	1 cut(s)	370
BspT107I	GGYRCC	2 cut(s)	127, 222
BspTNI	GGTCTC	2 cut(s)	198, 1332
BsrFI	RCCGGY	1 cut(s)	124
BsrI	ACTGG	2 cut(s)	848, 862
BssAI	RCCGGY	1 cut(s)	124
BssECI	CCNNGG	8 cut(s)	279, 381, 503, 866, 1186, 1366, 1504, 1515
BssMI	GATC	4 cut(s)	375, 692, 742, 898
BssNAI	GTATAC	2 cut(s)	790, 1546
BssNI	GRCGYC	1 cut(s)	128
BssSI	CACGAG	1 cut(s)	1122
BssT1I	CCWWGG	5 cut(s)	279, 1186, 1366, 1504, 1515
Bst1107I	GTATAC	2 cut(s)	790, 1546
Bst2BI	CACGAG	1 cut(s)	1122
Bst2UI	CCWGG	6 cut(s)	74, 227, 338, 606, 645, 867
Bst4CI	ACNGT	2 cut(s)	655, 1226
Bst6I	CTCTTC	2 cut(s)	383, 969
BstACI	GRCGYC	1 cut(s)	128
BstC8I	GCNNGC	3 cut(s)	126, 630, 1437
BstDEI	CTNAG	7 cut(s)	318, 455, 735, 842, 1073, 1443, 1608
BstDSI	CCRYGG	2 cut(s)	381, 503
BstEII	GGTNACC	1 cut(s)	1529
BstENI	CCTNNNNNAGG	1 cut(s)	1461
BstF5I	GGATG	5 cut(s)	235, 745, 769, 787, 1425
BstFNI	CGCG	2 cut(s)	988, 1095
BstH2I	RGCGCY	1 cut(s)	131
BstHHI	GCGC	4 cut(s)	7, 130, 182, 1415
BstKTI	GATC	4 cut(s)	378, 695, 745, 901
BstMAI	GTCTC	2 cut(s)	198, 1332
BstMBI	GATC	4 cut(s)	375, 692, 742, 898
BstMCI	CGRYCG	1 cut(s)	416
BstMWI	GCNNNNNNNGC	7 cut(s)	13, 406, 831, 1092, 1203, 1410, 1613
BstNI	CCWGG	6 cut(s)	74, 227, 338, 606, 645, 867
BstNSI	RCATGY	1 cut(s)	1475
BstPI	GGTNACC	1 cut(s)	1529
BstSCI	CCNGG	9 cut(s)	30, 72, 207, 225, 336, 415, 604, 643, 865
BstSFI	CTRYAG	1 cut(s)	1152
BstSLI	GKGCMC	1 cut(s)	250
BstUI	CGCG	2 cut(s)	988, 1095
BstV1I	GCAGC	5 cut(s)	309, 809, 1215, 1426, 1427
BstV2I	GAAGAC	1 cut(s)	575
BstX2I	RGATCY	2 cut(s)	375, 692
BstXI	CCANNNNNNTGG	3 cut(s)	286, 891, 1193
BstYI	RGATCY	2 cut(s)	375, 692
BstZ17I	GTATAC	2 cut(s)	790, 1546
Bsu36I	CCTNAGG	1 cut(s)	735
BsuI	GTATCC	1 cut(s)	1446
BsuRI	GGCC	5 cut(s)	112, 508, 684, 865, 872
BtgI	CCRYGG	2 cut(s)	381, 503
BtrI	CACGTC	1 cut(s)	611
BtsCI	GGATG	5 cut(s)	235, 745, 769, 787, 1425
BtsIMutI	CAGTG	2 cut(s)	651, 1081
Cac8I	GCNNGC	3 cut(s)	126, 630, 1437
CfoI	GCGC	4 cut(s)	7, 130, 182, 1415
Cfr10I	RCCGGY	1 cut(s)	124
Cfr13I	GGNCC	5 cut(s)	28, 863, 870, 1058, 1373
CseI	GACGC	1 cut(s)	634
Csp6I	GTAC	5 cut(s)	223, 881, 1080, 1307, 1467
CviAII	CATG	3 cut(s)	1004, 1399, 1472
CviQI	GTAC	5 cut(s)	223, 881, 1080, 1307, 1467
DdeI	CTNAG	7 cut(s)	318, 455, 735, 842, 1073, 1443, 1608
DinI	GGCGCC	1 cut(s)	129
DpnI	GATC	4 cut(s)	377, 694, 744, 900
DpnII	GATC	4 cut(s)	375, 692, 742, 898
Eam1104I	CTCTTC	2 cut(s)	383, 969
EarI	CTCTTC	2 cut(s)	383, 969
Eco130I	CCWWGG	5 cut(s)	279, 1186, 1366, 1504, 1515
Eco31I	GGTCTC	2 cut(s)	198, 1332
Eco32I	GATATC	1 cut(s)	313
Eco47I	GGWCC	3 cut(s)	28, 1058, 1373
Eco57I	CTGAAG	1 cut(s)	1280
Eco81I	CCTNAGG	1 cut(s)	735
Eco88I	CYCGRG	2 cut(s)	56, 701
Eco91I	GGTNACC	1 cut(s)	1529
EcoNI	CCTNNNNNAGG	1 cut(s)	1461
EcoO65I	GGTNACC	1 cut(s)	1529
EcoRII	CCWGG	6 cut(s)	72, 225, 336, 604, 643, 865
EcoRV	GATATC	1 cut(s)	313
EcoT14I	CCWWGG	5 cut(s)	279, 1186, 1366, 1504, 1515
EcoT22I	ATGCAT	1 cut(s)	1483
EgeI	GGCGCC	1 cut(s)	129
EheI	GGCGCC	1 cut(s)	129
ErhI	CCWWGG	5 cut(s)	279, 1186, 1366, 1504, 1515
FaeI	CATG	3 cut(s)	1007, 1402, 1475
FatI	CATG	3 cut(s)	1003, 1398, 1471
FauI	CCCGC	1 cut(s)	806
FblI	GTMKAC	3 cut(s)	789, 1545, 1620
Fnu4HI	GCNGC	5 cut(s)	323, 823, 1204, 1416, 1440
FokI	GGATG	5 cut(s)	242, 752, 756, 794, 1412
Fsp4HI	GCNGC	5 cut(s)	323, 823, 1204, 1416, 1440
FspBI	CTAG	6 cut(s)	402, 473, 560, 638, 1419, 1505
GlaI	GCGC	4 cut(s)	6, 129, 181, 1414
GluI	GCNGC	5 cut(s)	323, 823, 1204, 1416, 1440
GsaI	CCCAGC	1 cut(s)	350
GsuI	CTGGAG	1 cut(s)	927
HaeII	RGCGCY	1 cut(s)	131
HaeIII	GGCC	5 cut(s)	112, 508, 684, 865, 872
HapII	CCGG	5 cut(s)	32, 125, 208, 416, 1632
HgaI	GACGC	1 cut(s)	634
HhaI	GCGC	4 cut(s)	7, 130, 182, 1415
Hin1I	GRCGYC	1 cut(s)	128
Hin1II	CATG	3 cut(s)	1007, 1402, 1475
Hin6I	GCGC	4 cut(s)	5, 128, 180, 1413
HinP1I	GCGC	4 cut(s)	5, 128, 180, 1413
HincII	GTYRAC	2 cut(s)	1183, 1621
HindII	GTYRAC	2 cut(s)	1183, 1621
HindIII	AAGCTT	2 cut(s)	548, 755
HinfI	GANTC	3 cut(s)	199, 673, 730
HpaII	CCGG	5 cut(s)	32, 125, 208, 416, 1632
HphI	GGTGA	6 cut(s)	187, 268, 397, 928, 946, 1220
Hpy166II	GTNNAC	8 cut(s)	248, 499, 790, 1183, 1286, 1469, 1546, 1621
Hpy188I	TCNGA	7 cut(s)	69, 216, 456, 624, 672, 945, 1164
Hpy188III	TCNNGA	5 cut(s)	203, 727, 737, 779, 1124
Hpy8I	GTNNAC	8 cut(s)	248, 499, 790, 1183, 1286, 1469, 1546, 1621
Hpy99I	CGWCG	2 cut(s)	628, 1622
HpyCH4III	ACNGT	2 cut(s)	655, 1226
HpyCH4IV	ACGT	1 cut(s)	610
HpyCH4V	TGCA	7 cut(s)	136, 193, 248, 769, 1481, 1487, 1643
HpyF10VI	GCNNNNNNNGC	7 cut(s)	13, 406, 831, 1092, 1203, 1410, 1613
HpyF3I	CTNAG	7 cut(s)	318, 455, 735, 842, 1073, 1443, 1608
HpySE526I	ACGT	1 cut(s)	610
Hsp92I	GRCGYC	1 cut(s)	128
Hsp92II	CATG	3 cut(s)	1007, 1402, 1475
HspAI	GCGC	4 cut(s)	5, 128, 180, 1413
KasI	GGCGCC	1 cut(s)	127
KpnI	GGTACC	1 cut(s)	226
KroI	GCCGGC	1 cut(s)	124
KroNI	GCCGGC	1 cut(s)	126
Kzo9I	GATC	4 cut(s)	375, 692, 742, 898
LmnI	GCTCC	1 cut(s)	1148
Lsp1109I	GCAGC	5 cut(s)	309, 809, 1215, 1426, 1427
LweI	GCATC	1 cut(s)	778
MaeI	CTAG	6 cut(s)	402, 473, 560, 638, 1419, 1505
MaeII	ACGT	1 cut(s)	610
MaeIII	GTNAC	5 cut(s)	655, 1226, 1391, 1529, 1559
MalI	GATC	4 cut(s)	377, 694, 744, 900
MboI	GATC	4 cut(s)	375, 692, 742, 898
MboII	GAAGA	8 cut(s)	208, 400, 529, 580, 986, 1064, 1210, 1642
MflI	RGATCY	2 cut(s)	375, 692
MhlI	GDGCHC	2 cut(s)	250, 811
MluCI	AATT	8 cut(s)	259, 268, 395, 466, 534, 931, 950, 1136
MluI	ACGCGT	1 cut(s)	986
Mly113I	GGCGCC	1 cut(s)	128
MmeI	TCCRAC	2 cut(s)	647, 1088
Mph1103I	ATGCAT	1 cut(s)	1483
MroNI	GCCGGC	1 cut(s)	124
MseI	TTAA	4 cut(s)	552, 582, 912, 1241
MslI	CAYNNNNRTG	4 cut(s)	494, 1323, 1476, 1497
MspA1I	CMGCKG	3 cut(s)	322, 575, 1258
MspI	CCGG	5 cut(s)	32, 125, 208, 416, 1632
MspR9I	CCNGG	9 cut(s)	32, 74, 209, 227, 338, 417, 606, 645, 867
MvaI	CCWGG	6 cut(s)	74, 227, 338, 606, 645, 867
MvnI	CGCG	2 cut(s)	988, 1095
MwoI	GCNNNNNNNGC	7 cut(s)	13, 406, 831, 1092, 1203, 1410, 1613
NaeI	GCCGGC	1 cut(s)	126
NarI	GGCGCC	1 cut(s)	128
NciI	CCSGG	3 cut(s)	32, 209, 417
NdeII	GATC	4 cut(s)	375, 692, 742, 898
NgoMIV	GCCGGC	1 cut(s)	124
NlaIII	CATG	3 cut(s)	1007, 1402, 1475
NlaIV	GGNNCC	5 cut(s)	30, 71, 129, 224, 871
NmuCI	GTSAC	2 cut(s)	1226, 1559
NsiI	ATGCAT	1 cut(s)	1483
NspI	RCATGY	1 cut(s)	1475
OliI	CACNNNNGTG	1 cut(s)	1323
PaeR7I	CTCGAG	1 cut(s)	56
PciI	ACATGT	1 cut(s)	1471
PcsI	WCGNNNNNNNCGW	2 cut(s)	519, 811
PdiI	GCCGGC	1 cut(s)	126
PfeI	GAWTC	3 cut(s)	199, 673, 730
PfoI	TCCNGGA	2 cut(s)	336, 604
PkrI	GCNGC	5 cut(s)	324, 824, 1205, 1417, 1441
PluTI	GGCGCC	1 cut(s)	131
PscI	ACATGT	1 cut(s)	1471
Psp6I	CCWGG	6 cut(s)	72, 225, 336, 604, 643, 865
PspEI	GGTNACC	1 cut(s)	1529
PspFI	CCCAGC	1 cut(s)	346
PspGI	CCWGG	6 cut(s)	72, 225, 336, 604, 643, 865
PspN4I	GGNNCC	5 cut(s)	30, 71, 129, 224, 871
PspPI	GGNCC	5 cut(s)	28, 863, 870, 1058, 1373
PspXI	VCTCGAGB	1 cut(s)	56
PsuI	RGATCY	2 cut(s)	375, 692
PvuII	CAGCTG	3 cut(s)	322, 575, 1258
RsaI	GTAC	5 cut(s)	224, 882, 1081, 1308, 1468
RsaNI	GTAC	5 cut(s)	223, 881, 1080, 1307, 1467
RseI	CAYNNNNRTG	4 cut(s)	494, 1323, 1476, 1497
SalI	GTCGAC	1 cut(s)	1619
SaqAI	TTAA	4 cut(s)	552, 582, 912, 1241
SatI	GCNGC	5 cut(s)	323, 823, 1204, 1416, 1440
Sau3AI	GATC	4 cut(s)	375, 692, 742, 898
Sau96I	GGNCC	5 cut(s)	28, 863, 870, 1058, 1373
ScrFI	CCNGG	9 cut(s)	32, 74, 209, 227, 338, 417, 606, 645, 867
SduI	GDGCHC	2 cut(s)	250, 811
SfaNI	GCATC	1 cut(s)	778
SfcI	CTRYAG	1 cut(s)	1152
SfoI	GGCGCC	1 cut(s)	129
Sfr274I	CTCGAG	1 cut(s)	56
SinI	GGWCC	3 cut(s)	28, 1058, 1373
SlaI	CTCGAG	1 cut(s)	56
SmiMI	CAYNNNNRTG	4 cut(s)	494, 1323, 1476, 1497
SmlI	CTYRAG	3 cut(s)	56, 758, 1430
SmoI	CTYRAG	3 cut(s)	56, 758, 1430
Sse9I	AATT	8 cut(s)	259, 268, 395, 466, 534, 931, 950, 1136
SsiI	CCGC	4 cut(s)	799, 1093, 1295, 1371
SspDI	GGCGCC	1 cut(s)	127
SspMI	CTAG	6 cut(s)	402, 473, 560, 638, 1419, 1505
StyD4I	CCNGG	9 cut(s)	30, 72, 207, 225, 336, 415, 604, 643, 865
StyI	CCWWGG	5 cut(s)	279, 1186, 1366, 1504, 1515
TaaI	ACNGT	2 cut(s)	655, 1226
TaiI	ACGT	1 cut(s)	613
TaqI	TCGA	9 cut(s)	11, 21, 57, 202, 360, 412, 901, 1269, 1620
TaqII	GACCGA	1 cut(s)	56
TasI	AATT	8 cut(s)	259, 268, 395, 466, 534, 931, 950, 1136
TatI	WGTACW	1 cut(s)	1306
TfiI	GAWTC	3 cut(s)	199, 673, 730
Tru1I	TTAA	4 cut(s)	552, 582, 912, 1241
Tru9I	TTAA	4 cut(s)	552, 582, 912, 1241
TscAI	CASTG	2 cut(s)	658, 1081
TseFI	GTSAC	2 cut(s)	1226, 1559
TseI	GCWGC	5 cut(s)	322, 822, 1203, 1415, 1439
Tsp45I	GTSAC	2 cut(s)	1226, 1559
TspDTI	ATGAA	3 cut(s)	246, 891, 1008
TspGWI	ACGGA	6 cut(s)	602, 803, 1329, 1465, 1509, 1643
TspRI	CASTG	2 cut(s)	658, 1081
VneI	GTGCAC	1 cut(s)	246
VpaK11BI	GGWCC	3 cut(s)	28, 1058, 1373
XagI	CCTNNNNNAGG	1 cut(s)	1461
XapI	RAATTY	6 cut(s)	259, 268, 466, 931, 950, 1136
XceI	RCATGY	1 cut(s)	1475
XhoI	CTCGAG	1 cut(s)	56
XmaJI	CCTAGG	1 cut(s)	1504
XmiI	GTMKAC	3 cut(s)	789, 1545, 1620
XspI	CTAG	6 cut(s)	402, 473, 560, 638, 1419, 1505
Zsp2I	ATGCAT	1 cut(s)	1483

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.