pycom11g22980
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Reverse (-)
25995851 .. 25998627
2777 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g22980.6

Sequence Viewer

Length: 1185 bp
ATGTCTTGTTTCACTTTCTTGTTTAGAAAGAAGGAAGCTTCCCGTGTTAACCGGCCTGTTGAAATCGACGAAGTGGTTTCAGGCGTTTTGAATGTGAAGCAGTACGGTTATAGGGAACTGCAAATTGCCACTGAGAACTTCAGTGAAGAAAATGAAATTGGTCAGGGAGGCTTTGGCTCCGTGTACAAGGGCACACTCAAGGATGGGACTTTGGTGGCTATAAAAGTATTGTCAGCAGAGTCTCGTCAAGGATTGCGGGAATTTTTAACAGAAATCGAGGTGATTGCGACCGTTGAACATGATAACTTAGTTAAGCTATATGGTTGCTGTGCAGAAGGAGATCGATCATTCCACAGAATATTGGTTTATGGCTATCTTGAGAATAATAGCCTAGCACAAACACTTCTTGGTAGAGGCTACAGCAGTATCCAATTTACTTGGCTTACAAGGTGTAAAATTTGCATTGGTGTTGCAAGGGGGCTCGCTTATCTCCACGAGGAGGTTAGCCCTCATATTATTCACAGAGACATTAAAGCAAGCAATATTCTCCTTGATAAAGACCTCTCACCAAAAATTTCAGATTTTGGTCTTGCAAAGTTTATCGCCCCCAACTTGACTCATGTTAGCACTCGTGTTGCTGGAACAACAGGTTACTTGGCGCCTGAGTATGCCATACGAGGTCAAGTGACAAGAAAAGCAGACATCTACAGTTTTGGTGTTTTACTGTTGGAAATTGTTTGTGGGAGGTCTAACACTAACAGACAGTTACCACCCAAAGATCAATATCTTCTTGCACGGGCATGGGAACACCATGAGAAGGGGCAGCTGGTGGAATTAGTAGACGCATCTTTGAATGGAAATTTCGACGTTGAGGAGGCTTGCAGATTCCTAAAGGTTGGCCTTCTCTGCACTCAAGACATGCCTAAGCTCCGACCATCCATGTCTACCGTTGTTCAAATGCTGACAGGTGCATTAGATGTGAATGAGGGGAAGATATCCAAACCAGGGCTGTTTTCTGAATTTATGGAGCATACAGAAGGTGGGAGAGATAAGGCCAACAAAAGAGGTCCATCTCACACGATATCCACCTCAGGGAAGTTTATCAATTCATCATCTTCATCAGAAGCTGCCGCCACTTCATTTGCTACTATGACCTTCAATTCTATATATGACCGAAGCAATTAG

Protein Analysis

395

Amino Acids

43.67

Weight (kDa)

7.13

Isoelectric Point (pI)

36.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 658
AccI GTMKAC 2 cut(s) 840, 944
AciI CCGC 2 cut(s) 256, 1131
AcsI RAATTY 5 cut(s) 260, 456, 573, 859, 1019
AcuI CTGAAG 1 cut(s) 124
AcyI GRCGYC 1 cut(s) 659
AfaI GTAC 2 cut(s) 104, 185
AfiI CCNNNNNNNGG 4 cut(s) 499, 817, 1005, 1092
AgsI TTSAA 6 cut(s) 62, 91, 296, 853, 956, 1159
AjnI CCWGG 1 cut(s) 1003
AjuI GAANNNNNNNTTGG 2 cut(s) 141, 173
AluBI AGCT 5 cut(s) 38, 316, 826, 928, 1127
AluI AGCT 5 cut(s) 38, 316, 826, 928, 1127
Alw26I GTCTC 2 cut(s) 246, 519
AlwNI CAGNNNCTG 1 cut(s) 1127
AoxI GGCC 3 cut(s) 53, 898, 1053
ApeKI GCWGC 2 cut(s) 823, 1127
ApoI RAATTY 5 cut(s) 260, 456, 573, 859, 1019
AspLEI GCGC 1 cut(s) 661
AspS9I GGNCC 1 cut(s) 1067
AsuHPI GGTGA 2 cut(s) 292, 558
AvaII GGWCC 1 cut(s) 1067
AxyI CCTNAGG 1 cut(s) 1090
BaeGI GKGCMC 1 cut(s) 194
BaeI ACNNNNGTAYC 2 cut(s) 409, 442
BanI GGYRCC 1 cut(s) 658
BanII GRGCYC 1 cut(s) 483
BauI CACGAG 2 cut(s) 494, 630
BbvI GCAGC 2 cut(s) 835, 1114
BccI CCATC 3 cut(s) 197, 943, 1078
BcgI CGANNNNNNTGC 2 cut(s) 266, 300
BciT130I CCWGG 1 cut(s) 1005
BciVI GTATCC 1 cut(s) 437
BcoDI GTCTC 2 cut(s) 246, 519
BfaI CTAG 1 cut(s) 392
BfmI CTRYAG 2 cut(s) 418, 706
BfoI RGCGCY 1 cut(s) 662
BfuI GTATCC 1 cut(s) 437
BisI GCNGC 3 cut(s) 824, 1128, 1131
BlsI GCNGC 3 cut(s) 825, 1129, 1132
Bme1390I CCNGG 1 cut(s) 1005
Bme18I GGWCC 1 cut(s) 1067
BmgT120I GGNCC 1 cut(s) 1067
BmiI GGNNCC 2 cut(s) 178, 660
BmrFI CCNGG 1 cut(s) 1005
BmsI GCATC 1 cut(s) 854
Bpu10I CCTNAGC 1 cut(s) 924
BpuEI CTTGAG 3 cut(s) 182, 398, 897
Bsa29I ATCGAT 1 cut(s) 343
BsaBI GATNNNNATC 1 cut(s) 783
BsaHI GRCGYC 1 cut(s) 659
BsaJI CCNNGG 1 cut(s) 1004
Bsc4I CCNNNNNNNGG 4 cut(s) 499, 817, 1005, 1092
Bse118I RCCGGY 1 cut(s) 51
Bse21I CCTNAGG 1 cut(s) 1090
Bse8I GATNNNNATC 1 cut(s) 783
BseBI CCWGG 1 cut(s) 1005
BseCI ATCGAT 1 cut(s) 343
BseDI CCNNGG 1 cut(s) 1004
BseGI GGATG 2 cut(s) 208, 935
BseJI GATNNNNATC 1 cut(s) 783
BseLI CCNNNNNNNGG 4 cut(s) 499, 817, 1005, 1092
BseMII CTCAG 3 cut(s) 123, 654, 1104
BseRI GAGGAG 2 cut(s) 512, 887
BseSI GKGCMC 1 cut(s) 194
BseXI GCAGC 2 cut(s) 835, 1114
BsgI GTGCAG 2 cut(s) 351, 892
Bsh1285I CGRYCG 1 cut(s) 291
BshFI GGCC 3 cut(s) 55, 900, 1055
BshNI GGYRCC 1 cut(s) 658
BshVI ATCGAT 1 cut(s) 343
BsiEI CGRYCG 1 cut(s) 291
BsiSI CCGG 1 cut(s) 52
BslFI GGGAC 1 cut(s) 220
BslI CCNNNNNNNGG 4 cut(s) 499, 817, 1005, 1092
BsmAI GTCTC 2 cut(s) 246, 519
BsmFI GGGAC 1 cut(s) 220
BsnI GGCC 3 cut(s) 55, 900, 1055
Bsp1286I GDGCHC 2 cut(s) 194, 483
Bsp1407I TGTACA 1 cut(s) 183
Bsp143I GATC 3 cut(s) 340, 344, 778
BspACI CCGC 2 cut(s) 256, 1131
BspANI GGCC 3 cut(s) 55, 900, 1055
BspCNI CTCAG 3 cut(s) 124, 655, 1103
BspDI ATCGAT 1 cut(s) 343
BspLI GGNNCC 2 cut(s) 178, 660
BspT107I GGYRCC 1 cut(s) 658
BsrFI RCCGGY 1 cut(s) 51
BsrGI TGTACA 1 cut(s) 183
BssAI RCCGGY 1 cut(s) 51
BssECI CCNNGG 1 cut(s) 1004
BssMI GATC 3 cut(s) 340, 344, 778
BssNI GRCGYC 1 cut(s) 659
BssSI CACGAG 2 cut(s) 494, 630
Bst2BI CACGAG 2 cut(s) 494, 630
Bst2UI CCWGG 1 cut(s) 1005
Bst4CI ACNGT 6 cut(s) 107, 292, 710, 726, 765, 949
BstACI GRCGYC 1 cut(s) 659
BstAUI TGTACA 1 cut(s) 183
BstC8I GCNNGC 3 cut(s) 483, 538, 880
BstDEI CTNAG 5 cut(s) 132, 307, 663, 924, 1090
BstF5I GGATG 2 cut(s) 208, 935
BstH2I RGCGCY 1 cut(s) 662
BstHHI GCGC 1 cut(s) 661
BstKTI GATC 3 cut(s) 343, 347, 781
BstMAI GTCTC 2 cut(s) 246, 519
BstMBI GATC 3 cut(s) 340, 344, 778
BstMCI CGRYCG 1 cut(s) 291
BstMWI GCNNNNNNNGC 1 cut(s) 906
BstNI CCWGG 1 cut(s) 1005
BstNSI RCATGY 1 cut(s) 922
BstSCI CCNGG 1 cut(s) 1003
BstSFI CTRYAG 2 cut(s) 418, 706
BstSLI GKGCMC 1 cut(s) 194
BstV1I GCAGC 2 cut(s) 835, 1114
Bsu15I ATCGAT 1 cut(s) 343
Bsu36I CCTNAGG 1 cut(s) 1090
BsuI GTATCC 1 cut(s) 437
BsuRI GGCC 3 cut(s) 55, 900, 1055
BsuTUI ATCGAT 1 cut(s) 343
BtsCI GGATG 2 cut(s) 208, 935
BtsIMutI CAGTG 2 cut(s) 129, 148
Cac8I GCNNGC 3 cut(s) 483, 538, 880
CaiI CAGNNNCTG 1 cut(s) 1127
CfoI GCGC 1 cut(s) 661
Cfr10I RCCGGY 1 cut(s) 51
Cfr13I GGNCC 1 cut(s) 1067
ClaI ATCGAT 1 cut(s) 343
CseI GACGC 1 cut(s) 851
Csp6I GTAC 2 cut(s) 103, 184
CspCI CAANNNNNGTGG 2 cut(s) 1123, 1158
CviAII CATG 6 cut(s) 299, 620, 801, 812, 919, 940
CviQI GTAC 2 cut(s) 103, 184
DdeI CTNAG 5 cut(s) 132, 307, 663, 924, 1090
DinI GGCGCC 1 cut(s) 660
DpnI GATC 3 cut(s) 342, 346, 780
DpnII GATC 3 cut(s) 340, 344, 778
Eco24I GRGCYC 1 cut(s) 483
Eco32I GATATC 2 cut(s) 996, 1083
Eco47I GGWCC 1 cut(s) 1067
Eco57I CTGAAG 1 cut(s) 124
Eco81I CCTNAGG 1 cut(s) 1090
EcoRII CCWGG 1 cut(s) 1003
EcoRV GATATC 2 cut(s) 996, 1083
EcoT38I GRGCYC 1 cut(s) 483
EgeI GGCGCC 1 cut(s) 660
EheI GGCGCC 1 cut(s) 660
FaeI CATG 6 cut(s) 302, 623, 804, 815, 922, 943
FaqI GGGAC 1 cut(s) 220
FatI CATG 6 cut(s) 298, 619, 800, 811, 918, 939
FauI CCCGC 1 cut(s) 249
FblI GTMKAC 2 cut(s) 840, 944
Fnu4HI GCNGC 3 cut(s) 824, 1128, 1131
FokI GGATG 2 cut(s) 215, 922
FriOI GRGCYC 1 cut(s) 483
Fsp4HI GCNGC 3 cut(s) 824, 1128, 1131
FspBI CTAG 1 cut(s) 392
GlaI GCGC 1 cut(s) 660
GluI GCNGC 3 cut(s) 824, 1128, 1131
HaeII RGCGCY 1 cut(s) 662
HaeIII GGCC 3 cut(s) 55, 900, 1055
HapII CCGG 1 cut(s) 52
HgaI GACGC 1 cut(s) 851
HhaI GCGC 1 cut(s) 661
Hin1I GRCGYC 1 cut(s) 659
Hin1II CATG 6 cut(s) 302, 623, 804, 815, 922, 943
Hin6I GCGC 1 cut(s) 659
HinP1I GCGC 1 cut(s) 659
HincII GTYRAC 1 cut(s) 49
HindII GTYRAC 1 cut(s) 49
HindIII AAGCTT 1 cut(s) 36
HinfI GANTC 3 cut(s) 239, 616, 885
HpaI GTTAAC 1 cut(s) 49
HpaII CCGG 1 cut(s) 52
HphI GGTGA 2 cut(s) 292, 558
Hpy166II GTNNAC 4 cut(s) 49, 184, 841, 945
Hpy188I TCNGA 4 cut(s) 580, 932, 1018, 1123
Hpy188III TCNNGA 2 cut(s) 377, 914
Hpy8I GTNNAC 4 cut(s) 49, 184, 841, 945
Hpy99I CGWCG 2 cut(s) 71, 869
HpyAV CCTTC 6 cut(s) 25, 329, 811, 911, 1031, 1165
HpyCH4III ACNGT 6 cut(s) 107, 292, 710, 726, 765, 949
HpyCH4IV ACGT 1 cut(s) 867
HpyCH4V TGCA 9 cut(s) 121, 332, 462, 473, 593, 794, 882, 909, 971
HpyF10VI GCNNNNNNNGC 1 cut(s) 906
HpyF3I CTNAG 5 cut(s) 132, 307, 663, 924, 1090
HpySE526I ACGT 1 cut(s) 867
Hsp92I GRCGYC 1 cut(s) 659
Hsp92II CATG 6 cut(s) 302, 623, 804, 815, 922, 943
HspAI GCGC 1 cut(s) 659
KasI GGCGCC 1 cut(s) 658
KspAI GTTAAC 1 cut(s) 49
Kzo9I GATC 3 cut(s) 340, 344, 778
LmnI GCTCC 3 cut(s) 182, 933, 1027
Lsp1109I GCAGC 2 cut(s) 835, 1114
LweI GCATC 1 cut(s) 854
MaeI CTAG 1 cut(s) 392
MaeII ACGT 1 cut(s) 867
MaeIII GTNAC 3 cut(s) 650, 685, 765
MalI GATC 3 cut(s) 342, 346, 780
MboI GATC 3 cut(s) 340, 344, 778
MboII GAAGA 4 cut(s) 158, 779, 1003, 1107
MhlI GDGCHC 2 cut(s) 194, 483
Mly113I GGCGCC 1 cut(s) 659
MlyI GAGTC 2 cut(s) 248, 610
MmeI TCCRAC 2 cut(s) 708, 955
MseI TTAA 4 cut(s) 48, 266, 312, 531
MslI CAYNNNNRTG 1 cut(s) 799
MspA1I CMGCKG 1 cut(s) 826
MspI CCGG 1 cut(s) 52
MspR9I CCNGG 1 cut(s) 1005
MvaI CCWGG 1 cut(s) 1005
MwoI GCNNNNNNNGC 1 cut(s) 906
NarI GGCGCC 1 cut(s) 659
NdeII GATC 3 cut(s) 340, 344, 778
NlaIII CATG 6 cut(s) 302, 623, 804, 815, 922, 943
NlaIV GGNNCC 2 cut(s) 178, 660
NmuCI GTSAC 1 cut(s) 685
NspI RCATGY 1 cut(s) 922
PfeI GAWTC 1 cut(s) 885
PkrI GCNGC 3 cut(s) 825, 1129, 1132
PleI GAGTC 2 cut(s) 247, 610
PluTI GGCGCC 1 cut(s) 662
PpsI GAGTC 2 cut(s) 247, 610
Psp6I CCWGG 1 cut(s) 1003
PspGI CCWGG 1 cut(s) 1003
PspN4I GGNNCC 2 cut(s) 178, 660
PspPI GGNCC 1 cut(s) 1067
PstNI CAGNNNCTG 1 cut(s) 1127
PvuII CAGCTG 1 cut(s) 826
RsaI GTAC 2 cut(s) 104, 185
RsaNI GTAC 2 cut(s) 103, 184
RseI CAYNNNNRTG 1 cut(s) 799
SaqAI TTAA 4 cut(s) 48, 266, 312, 531
SatI GCNGC 3 cut(s) 824, 1128, 1131
Sau3AI GATC 3 cut(s) 340, 344, 778
Sau96I GGNCC 1 cut(s) 1067
SchI GAGTC 2 cut(s) 248, 610
ScrFI CCNGG 1 cut(s) 1005
SduI GDGCHC 2 cut(s) 194, 483
SfaNI GCATC 1 cut(s) 854
SfcI CTRYAG 2 cut(s) 418, 706
SfoI GGCGCC 1 cut(s) 660
SinI GGWCC 1 cut(s) 1067
SmiMI CAYNNNNRTG 1 cut(s) 799
SmlI CTYRAG 3 cut(s) 197, 377, 912
SmoI CTYRAG 3 cut(s) 197, 377, 912
SsiI CCGC 2 cut(s) 256, 1131
SspDI GGCGCC 1 cut(s) 658
SspI AATATT 2 cut(s) 360, 544
SspMI CTAG 1 cut(s) 392
StyD4I CCNGG 1 cut(s) 1003
TaaI ACNGT 6 cut(s) 107, 292, 710, 726, 765, 949
TaiI ACGT 1 cut(s) 870
TaqI TCGA 4 cut(s) 66, 276, 343, 864
TatI WGTACW 1 cut(s) 183
TauI GCSGC 1 cut(s) 1133
TfiI GAWTC 1 cut(s) 885
Tru1I TTAA 4 cut(s) 48, 266, 312, 531
Tru9I TTAA 4 cut(s) 48, 266, 312, 531
TscAI CASTG 2 cut(s) 136, 148
TseFI GTSAC 1 cut(s) 685
TseI GCWGC 2 cut(s) 823, 1127
Tsp45I GTSAC 1 cut(s) 685
TspDTI ATGAA 4 cut(s) 168, 1098, 1107, 1128
TspGWI ACGGA 1 cut(s) 169
TspRI CASTG 2 cut(s) 136, 148
VpaK11BI GGWCC 1 cut(s) 1067
XapI RAATTY 5 cut(s) 260, 456, 573, 859, 1019
XceI RCATGY 1 cut(s) 922
XmiI GTMKAC 2 cut(s) 840, 944
XspI CTAG 1 cut(s) 392
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.