RLG00000033303
ERF Family

Belongs to the protein kinase superfamily

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
Physical Location & Seq
Forward (+)
25530324 .. 25533556
3233 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000033303

Sequence Viewer

Length: 1164 bp
ATGGCTTGTTTCTCGTGCTTGTTCAGCCAGAAGACAGCTTCTTCAGTTAAACGGACTGTTGACATTGATGAAGTTGTTTCAGGTATTTCAAATCTCAAACTGTACAGTTACAAGGAACTGCAAAATGCCGCTGAAAATTTCAGTGAAGACAATAAGATTGGGCAGGGAGGCTTTGGCTCTGTATACAAGGGAACACTCAAGGATGGCTCTGTGGCAGCAATAAAGGTGTTGTCAGGAGATTCTAGGCAAGGGTCACGTGAATTTTTGACAGAAATTGAGGTGATTGCAAATGTTGATCATGAGAACCTAGTTAAGCTATATGGTTGCTGTGCAGAAGGAAATCATAGGATATTGGTTTATGGCTATCTTGAGAATAATAGCCTTTCACAAACTCTTCTCGATGGAGGCCAAAGTGGCATCCAATTTAGTTGGCAAGCAAGGTGTAAAATCTGCATTGGTATTGCAAGGGGGCTTGCTTACCTCCATGAGGATGTTCAACCCCATATTATTCACAGAGACATTAAAGCAAGCAATATTCTTCTCGATAAAGACCTTTCGCCCAAAATTTCAGATTTTGGTCTTGCAAAGTTTATCGCACCCAACTTGACCCATGTTAGTACTCGTGTTGCTGGAACAGCAGGTTACATAGCACCTGAATATGCCATACGAGGTCAAGTGACAAGGAAAGCAGATATCTATAGTTTTGGTGTTTTAGTTTTGGAAATTGTTAGTGGCAGGTGCAACACAAACAGACGTTTACCATCCAAAGAACAGTATCTTCTTGAAAGGGTATGGGAACTACATGAGAGGGGTCAGCTGGTGGAGTTGGTCGATACATCATTAAATGAAGATTTGAATGTTGAGGAGGCTTGCAAATTCATGAAGATCGGTCTTCTTTGCACCCAAGACAAGCCCAAGCTCCGACCATCCATGTCTACAGTTGTTAAGATGCTGACAGGTGAGATAGACGTGGATGACGAGAAGATAGACAAACCTGGAATGCTTTCTGAGTTCATGAATCAGAGAGATTTGGCTGGTGTTAAACACTCGTCTTACTCACTATCGCCTTCTGGGAAGGTTCTCAATTCTTCATCTTCCTCAGAACAAATCATCACTTCATTTGCTACCATGACCTTCAATTCTATATATGACCGAAGCAATTAG

Protein Analysis

388

Amino Acids

42.76

Weight (kDa)

6.11

Isoelectric Point (pI)

36.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 48 - 316 2.4e-47 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 50 - 318 8.4e-46 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 726
Acc36I ACCTGC 2 cut(s) 629, 726
AccI GTMKAC 2 cut(s) 183, 935
AciI CCGC 1 cut(s) 129
AcsI RAATTY 4 cut(s) 136, 260, 564, 875
AcuI CTGAAG 1 cut(s) 27
AcvI CACGTG 1 cut(s) 257
AfaI GTAC 2 cut(s) 104, 619
AfiI CCNNNNNNNGG 1 cut(s) 487
AgsI TTSAA 5 cut(s) 90, 497, 785, 856, 1138
AjiI CACGTC 1 cut(s) 970
AjnI CCWGG 1 cut(s) 994
AluBI AGCT 4 cut(s) 38, 316, 817, 919
AluI AGCT 4 cut(s) 38, 316, 817, 919
Alw26I GTCTC 1 cut(s) 510
AoxI GGCC 1 cut(s) 406
ApeKI GCWGC 1 cut(s) 215
ApoI RAATTY 4 cut(s) 136, 260, 564, 875
Asp700I GAANNNNTTC 1 cut(s) 1003
AsuHPI GGTGA 2 cut(s) 292, 971
BauI CACGAG 2 cut(s) 13, 621
BbrPI CACGTG 1 cut(s) 257
BbsI GAAGAC 3 cut(s) 38, 153, 884
BbvI GCAGC 1 cut(s) 227
BccI CCATC 4 cut(s) 197, 395, 769, 934
BciT130I CCWGG 1 cut(s) 996
BclI TGATCA 1 cut(s) 295
BcoDI GTCTC 1 cut(s) 510
BfaI CTAG 2 cut(s) 243, 308
BfmI CTRYAG 2 cut(s) 697, 936
BfuAI ACCTGC 2 cut(s) 629, 726
BglI GCCNNNNNGGC 1 cut(s) 414
BisI GCNGC 2 cut(s) 129, 216
BlsI GCNGC 2 cut(s) 130, 217
BmcAI AGTACT 1 cut(s) 619
Bme1390I CCNGG 1 cut(s) 996
BmgBI CACGTC 1 cut(s) 970
BmrFI CCNGG 1 cut(s) 996
BmsI GCATC 2 cut(s) 426, 939
BpiI GAAGAC 3 cut(s) 38, 153, 884
BpuEI CTTGAG 2 cut(s) 182, 389
BsaAI YACGTR 1 cut(s) 257
Bsc4I CCNNNNNNNGG 1 cut(s) 487
BseBI CCWGG 1 cut(s) 996
BseGI GGATG 6 cut(s) 208, 417, 496, 761, 926, 979
BseLI CCNNNNNNNGG 1 cut(s) 487
BseMII CTCAG 2 cut(s) 999, 1113
BseRI GAGGAG 1 cut(s) 878
BseXI GCAGC 1 cut(s) 227
BsgI GTGCAG 1 cut(s) 351
BshFI GGCC 1 cut(s) 408
BslI CCNNNNNNNGG 1 cut(s) 487
BsmAI GTCTC 1 cut(s) 510
BsmI GAATGC 1 cut(s) 1005
BsnI GGCC 1 cut(s) 408
Bsp1407I TGTACA 1 cut(s) 102
Bsp143I GATC 2 cut(s) 295, 885
BspACI CCGC 1 cut(s) 129
BspANI GGCC 1 cut(s) 408
BspCNI CTCAG 2 cut(s) 1000, 1112
BspHI TCATGA 3 cut(s) 298, 879, 1014
BspMI ACCTGC 2 cut(s) 629, 726
BsrGI TGTACA 1 cut(s) 102
BssMI GATC 2 cut(s) 295, 885
BssNAI GTATAC 1 cut(s) 184
BssSI CACGAG 2 cut(s) 13, 621
Bst1107I GTATAC 1 cut(s) 184
Bst2BI CACGAG 2 cut(s) 13, 621
Bst2UI CCWGG 1 cut(s) 996
Bst4CI ACNGT 5 cut(s) 58, 102, 107, 774, 940
Bst6I CTCTTC 1 cut(s) 399
BstAUI TGTACA 1 cut(s) 102
BstBAI YACGTR 1 cut(s) 257
BstC8I GCNNGC 4 cut(s) 435, 474, 529, 871
BstDEI CTNAG 2 cut(s) 1008, 1099
BstENI CCTNNNNNAGG 1 cut(s) 485
BstF5I GGATG 6 cut(s) 208, 417, 496, 761, 926, 979
BstKTI GATC 2 cut(s) 298, 888
BstMAI GTCTC 1 cut(s) 510
BstMBI GATC 2 cut(s) 295, 885
BstMWI GCNNNNNNNGC 3 cut(s) 24, 414, 635
BstNI CCWGG 1 cut(s) 996
BstSCI CCNGG 1 cut(s) 994
BstSFI CTRYAG 2 cut(s) 697, 936
BstV1I GCAGC 1 cut(s) 227
BstV2I GAAGAC 3 cut(s) 38, 153, 884
BstZ17I GTATAC 1 cut(s) 184
BsuRI GGCC 1 cut(s) 408
BtrI CACGTC 1 cut(s) 970
BtsCI GGATG 6 cut(s) 208, 417, 496, 761, 926, 979
BtsIMutI CAGTG 1 cut(s) 148
BveI ACCTGC 2 cut(s) 629, 726
Cac8I GCNNGC 4 cut(s) 435, 474, 529, 871
CciI TCATGA 3 cut(s) 298, 879, 1014
Csp6I GTAC 2 cut(s) 103, 618
CviAII CATG 8 cut(s) 299, 485, 611, 803, 880, 931, 1015, 1129
CviQI GTAC 2 cut(s) 103, 618
DdeI CTNAG 2 cut(s) 1008, 1099
DpnI GATC 2 cut(s) 297, 887
DpnII GATC 2 cut(s) 295, 885
Eam1104I CTCTTC 1 cut(s) 399
EarI CTCTTC 1 cut(s) 399
Eco32I GATATC 1 cut(s) 694
Eco57I CTGAAG 1 cut(s) 27
Eco72I CACGTG 1 cut(s) 257
EcoNI CCTNNNNNAGG 1 cut(s) 485
EcoRII CCWGG 1 cut(s) 994
EcoRV GATATC 1 cut(s) 694
FaeI CATG 8 cut(s) 302, 488, 614, 806, 883, 934, 1018, 1132
FatI CATG 8 cut(s) 298, 484, 610, 802, 879, 930, 1014, 1128
FbaI TGATCA 1 cut(s) 295
FblI GTMKAC 2 cut(s) 183, 935
Fnu4HI GCNGC 2 cut(s) 129, 216
FokI GGATG 6 cut(s) 215, 404, 503, 748, 913, 986
Fsp4HI GCNGC 2 cut(s) 129, 216
FspBI CTAG 2 cut(s) 243, 308
GluI GCNGC 2 cut(s) 129, 216
HaeIII GGCC 1 cut(s) 408
Hin1II CATG 8 cut(s) 302, 488, 614, 806, 883, 934, 1018, 1132
HincII GTYRAC 1 cut(s) 61
HindII GTYRAC 1 cut(s) 61
HinfI GANTC 2 cut(s) 239, 1018
HphI GGTGA 2 cut(s) 292, 971
Hpy166II GTNNAC 4 cut(s) 61, 184, 758, 936
Hpy188I TCNGA 5 cut(s) 571, 923, 1009, 1023, 1102
Hpy188III TCNNGA 8 cut(s) 234, 299, 368, 398, 542, 782, 880, 1015
Hpy8I GTNNAC 4 cut(s) 61, 184, 758, 936
HpyAV CCTTC 4 cut(s) 329, 1069, 1077, 1144
HpyCH4III ACNGT 5 cut(s) 58, 102, 107, 774, 940
HpyCH4IV ACGT 3 cut(s) 256, 754, 969
HpyCH4V TGCA 9 cut(s) 121, 287, 332, 453, 464, 584, 741, 873, 900
HpyF10VI GCNNNNNNNGC 3 cut(s) 24, 414, 635
HpyF3I CTNAG 2 cut(s) 1008, 1099
HpySE526I ACGT 3 cut(s) 256, 754, 969
Hsp92II CATG 8 cut(s) 302, 488, 614, 806, 883, 934, 1018, 1132
Ksp22I TGATCA 1 cut(s) 295
Kzo9I GATC 2 cut(s) 295, 885
LmnI GCTCC 1 cut(s) 924
Lsp1109I GCAGC 1 cut(s) 227
LweI GCATC 2 cut(s) 426, 939
MaeI CTAG 2 cut(s) 243, 308
MaeII ACGT 3 cut(s) 256, 754, 969
MaeIII GTNAC 4 cut(s) 107, 252, 641, 676
MalI GATC 2 cut(s) 297, 887
MboI GATC 2 cut(s) 295, 885
MmeI TCCRAC 1 cut(s) 946
MroXI GAANNNNTTC 1 cut(s) 1003
MseI TTAA 6 cut(s) 48, 312, 522, 842, 945, 1041
MslI CAYNNNNRTG 1 cut(s) 489
MspA1I CMGCKG 2 cut(s) 131, 817
MspR9I CCNGG 1 cut(s) 996
Mva1269I GAATGC 1 cut(s) 1005
MvaI CCWGG 1 cut(s) 996
MwoI GCNNNNNNNGC 3 cut(s) 24, 414, 635
NdeII GATC 2 cut(s) 295, 885
NlaIII CATG 8 cut(s) 302, 488, 614, 806, 883, 934, 1018, 1132
NmuCI GTSAC 2 cut(s) 252, 676
PagI TCATGA 3 cut(s) 298, 879, 1014
PaqCI CACCTGC 1 cut(s) 726
PcsI WCGNNNNNNNCGW 1 cut(s) 975
PctI GAATGC 1 cut(s) 1005
PdmI GAANNNNTTC 1 cut(s) 1003
PfeI GAWTC 2 cut(s) 239, 1018
PkrI GCNGC 2 cut(s) 130, 217
PmaCI CACGTG 1 cut(s) 257
PmlI CACGTG 1 cut(s) 257
Ppu21I YACGTR 1 cut(s) 257
Psp6I CCWGG 1 cut(s) 994
PspCI CACGTG 1 cut(s) 257
PspGI CCWGG 1 cut(s) 994
PvuII CAGCTG 1 cut(s) 817
RsaI GTAC 2 cut(s) 104, 619
RsaNI GTAC 2 cut(s) 103, 618
RseI CAYNNNNRTG 1 cut(s) 489
SaqAI TTAA 6 cut(s) 48, 312, 522, 842, 945, 1041
SatI GCNGC 2 cut(s) 129, 216
Sau3AI GATC 2 cut(s) 295, 885
ScaI AGTACT 1 cut(s) 619
ScrFI CCNGG 1 cut(s) 996
SfaNI GCATC 2 cut(s) 426, 939
SfcI CTRYAG 2 cut(s) 697, 936
SmiMI CAYNNNNRTG 1 cut(s) 489
SmlI CTYRAG 2 cut(s) 197, 368
SmoI CTYRAG 2 cut(s) 197, 368
SsiI CCGC 1 cut(s) 129
SspI AATATT 1 cut(s) 535
SspMI CTAG 2 cut(s) 243, 308
StyD4I CCNGG 1 cut(s) 994
TaaI ACNGT 5 cut(s) 58, 102, 107, 774, 940
TaiI ACGT 3 cut(s) 259, 757, 972
TaqI TCGA 3 cut(s) 399, 543, 831
TaqII GACCGA 1 cut(s) 878
TatI WGTACW 2 cut(s) 102, 617
TauI GCSGC 1 cut(s) 131
TfiI GAWTC 2 cut(s) 239, 1018
Tru1I TTAA 6 cut(s) 48, 312, 522, 842, 945, 1041
Tru9I TTAA 6 cut(s) 48, 312, 522, 842, 945, 1041
TscAI CASTG 1 cut(s) 148
TseFI GTSAC 2 cut(s) 252, 676
TseI GCWGC 1 cut(s) 215
Tsp45I GTSAC 2 cut(s) 252, 676
TspDTI ATGAA 8 cut(s) 84, 861, 868, 896, 1003, 1031, 1080, 1107
TspGWI ACGGA 1 cut(s) 67
TspRI CASTG 1 cut(s) 148
XagI CCTNNNNNAGG 1 cut(s) 485
XapI RAATTY 4 cut(s) 136, 260, 564, 875
XmiI GTMKAC 2 cut(s) 183, 935
XmnI GAANNNNTTC 1 cut(s) 1003
XspI CTAG 2 cut(s) 243, 308
ZrmI AGTACT 1 cut(s) 619
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.