pycom13g21210

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
17510095 .. 17512088
1994 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g21210.7

Sequence Viewer

Length: 564 bp
ATGGATACTCTTGGAGCTCTAGCATTGGCTACGGAGCCACCTACAGATCACTTGATGGACAGAACCCCTGTTGGTCGAAGAGAGCCGCTCATAACAAATATAATGTGGAGGAACTTGTTGGTTCAGGCTTTCTACCAAGTCACTGTCCTACTTGTCTTCAACTTCCGAGGAATAAGTATACTGAAGCTGCATGGTCCCAATGCTACCACTGTGAAGAATACTCTGATATTCAATACATTTGTCCTATGTCAAATTTTCAATGAATTCAATGCTCGAAAGCCCGATGAGTTCAATATATTCCAAGGGATAACCAAGAACTTACTTTTTATGGGAATAGTAGGAGTAACTCTCGTACTTCAGATTATCATCGTCGAGTTCCTTGGGAAGTTCACTAAAACAAAACCCCTTACTTGGGATCTTTGGCTGATTTCAGCTGTAATAGCTTTTATCAGTTGGCCTCTCGCTGTTGTTGGGAAACTGATTCCAGTTCCAGAAACTCCGTTATTCAAGTATTTCACAAGAATGATCCCTTGGCGAAGAAACAATTCAGAGGTTAGTCAGTAG

Protein Analysis

188

Amino Acids

21.39

Weight (kDa)

9.77

Isoelectric Point (pI)

23.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 88
AccI GTMKAC 1 cut(s) 178
AciI CCGC 1 cut(s) 86
AclWI GGATC 2 cut(s) 423, 520
AcsI RAATTY 2 cut(s) 252, 263
AcuI CTGAAG 2 cut(s) 203, 341
AfaI GTAC 1 cut(s) 354
AfiI CCNNNNNNNGG 2 cut(s) 411, 412
AgsI TTSAA 6 cut(s) 160, 232, 259, 268, 292, 508
AjuI GAANNNNNNNTTGG 2 cut(s) 514, 546
AluBI AGCT 4 cut(s) 17, 187, 434, 443
AluI AGCT 4 cut(s) 17, 187, 434, 443
Alw21I GWGCWC 1 cut(s) 19
AlwI GGATC 2 cut(s) 423, 520
AoxI GGCC 1 cut(s) 455
ApeKI GCWGC 1 cut(s) 187
ApoI RAATTY 2 cut(s) 252, 263
Asp700I GAANNNNTTC 1 cut(s) 544
AspS9I GGNCC 1 cut(s) 194
AvaII GGWCC 1 cut(s) 194
BanII GRGCYC 1 cut(s) 19
BbsI GAAGAC 1 cut(s) 148
Bbv12I GWGCWC 1 cut(s) 19
BbvI GCAGC 1 cut(s) 174
BccI CCATC 1 cut(s) 49
BfaI CTAG 1 cut(s) 20
BfmI CTRYAG 1 cut(s) 42
BisI GCNGC 2 cut(s) 86, 188
BlsI GCNGC 2 cut(s) 87, 189
Bme18I GGWCC 1 cut(s) 194
BmgT120I GGNCC 1 cut(s) 194
BmiI GGNNCC 2 cut(s) 36, 196
BpiI GAAGAC 1 cut(s) 148
BplI GAGNNNNNCTC 4 cut(s) 72, 104, 333, 365
BsaBI GATNNNNATC 1 cut(s) 365
BsaJI CCNNGG 4 cut(s) 166, 301, 379, 530
Bsc4I CCNNNNNNNGG 2 cut(s) 411, 412
Bse1I ACTGG 1 cut(s) 485
Bse8I GATNNNNATC 1 cut(s) 365
BseDI CCNNGG 4 cut(s) 166, 301, 379, 530
BseJI GATNNNNATC 1 cut(s) 365
BseLI CCNNNNNNNGG 2 cut(s) 411, 412
BseNI ACTGG 1 cut(s) 485
BseXI GCAGC 1 cut(s) 174
BshFI GGCC 1 cut(s) 457
BsiHKAI GWGCWC 1 cut(s) 19
BslFI GGGAC 1 cut(s) 180
BslI CCNNNNNNNGG 2 cut(s) 411, 412
BsmFI GGGAC 1 cut(s) 180
BsnI GGCC 1 cut(s) 457
Bsp1286I GDGCHC 1 cut(s) 19
Bsp143I GATC 3 cut(s) 46, 415, 525
BspACI CCGC 1 cut(s) 86
BspANI GGCC 1 cut(s) 457
BspLI GGNNCC 2 cut(s) 36, 196
BspPI GGATC 2 cut(s) 423, 520
BsrBI CCGCTC 1 cut(s) 88
BsrI ACTGG 1 cut(s) 485
BssECI CCNNGG 4 cut(s) 166, 301, 379, 530
BssMI GATC 3 cut(s) 46, 415, 525
BssNAI GTATAC 1 cut(s) 179
BssT1I CCWWGG 3 cut(s) 301, 379, 530
Bst1107I GTATAC 1 cut(s) 179
Bst4CI ACNGT 2 cut(s) 145, 211
Bst6I CTCTTC 1 cut(s) 73
BstKTI GATC 3 cut(s) 49, 418, 528
BstMBI GATC 3 cut(s) 46, 415, 525
BstMWI GCNNNNNNNGC 1 cut(s) 440
BstSFI CTRYAG 1 cut(s) 42
BstV1I GCAGC 1 cut(s) 174
BstV2I GAAGAC 1 cut(s) 148
BstX2I RGATCY 1 cut(s) 415
BstYI RGATCY 1 cut(s) 415
BstZ17I GTATAC 1 cut(s) 179
BsuRI GGCC 1 cut(s) 457
BtsIMutI CAGTG 2 cut(s) 141, 207
Cfr13I GGNCC 1 cut(s) 194
Csp6I GTAC 1 cut(s) 353
CviAII CATG 1 cut(s) 191
CviQI GTAC 1 cut(s) 353
DpnI GATC 3 cut(s) 48, 417, 527
DpnII GATC 3 cut(s) 46, 415, 525
Eam1104I CTCTTC 1 cut(s) 73
EarI CTCTTC 1 cut(s) 73
Ecl136II GAGCTC 1 cut(s) 17
Eco130I CCWWGG 3 cut(s) 301, 379, 530
Eco24I GRGCYC 1 cut(s) 19
Eco47I GGWCC 1 cut(s) 194
Eco53kI GAGCTC 1 cut(s) 17
Eco57I CTGAAG 2 cut(s) 203, 341
EcoICRI GAGCTC 1 cut(s) 17
EcoRI GAATTC 1 cut(s) 263
EcoT14I CCWWGG 3 cut(s) 301, 379, 530
EcoT38I GRGCYC 1 cut(s) 19
ErhI CCWWGG 3 cut(s) 301, 379, 530
FaeI CATG 1 cut(s) 194
FaiI YATR 7 cut(s) 92, 101, 179, 192, 247, 296, 329
FaqI GGGAC 1 cut(s) 180
FatI CATG 1 cut(s) 190
FblI GTMKAC 1 cut(s) 178
Fnu4HI GCNGC 2 cut(s) 86, 188
FriOI GRGCYC 1 cut(s) 19
Fsp4HI GCNGC 2 cut(s) 86, 188
FspBI CTAG 1 cut(s) 20
GluI GCNGC 2 cut(s) 86, 188
HaeIII GGCC 1 cut(s) 457
Hin1II CATG 1 cut(s) 194
HinfI GANTC 1 cut(s) 481
Hpy166II GTNNAC 2 cut(s) 179, 390
Hpy188I TCNGA 4 cut(s) 167, 225, 360, 550
Hpy188III TCNNGA 1 cut(s) 491
Hpy8I GTNNAC 2 cut(s) 179, 390
Hpy99I CGWCG 1 cut(s) 374
HpyCH4III ACNGT 2 cut(s) 145, 211
HpyCH4V TGCA 1 cut(s) 190
HpyF10VI GCNNNNNNNGC 1 cut(s) 440
Hsp92II CATG 1 cut(s) 194
Kzo9I GATC 3 cut(s) 46, 415, 525
LmnI GCTCC 2 cut(s) 14, 34
LpnPI CCDG 4 cut(s) 81, 110, 498, 504
Lsp1109I GCAGC 1 cut(s) 174
MaeI CTAG 1 cut(s) 20
MaeIII GTNAC 2 cut(s) 139, 343
MalI GATC 3 cut(s) 48, 417, 527
MbiI CCGCTC 1 cut(s) 88
MboI GATC 3 cut(s) 46, 415, 525
MboII GAAGA 4 cut(s) 90, 148, 226, 549
MflI RGATCY 1 cut(s) 415
MhlI GDGCHC 1 cut(s) 19
MluCI AATT 3 cut(s) 252, 263, 544
MnlI CCTC 4 cut(s) 102, 161, 468, 544
MroXI GAANNNNTTC 1 cut(s) 544
MslI CAYNNNNRTG 1 cut(s) 521
MspA1I CMGCKG 1 cut(s) 434
MwoI GCNNNNNNNGC 1 cut(s) 440
NdeII GATC 3 cut(s) 46, 415, 525
NlaIII CATG 1 cut(s) 194
NlaIV GGNNCC 2 cut(s) 36, 196
NmuCI GTSAC 1 cut(s) 139
PdmI GAANNNNTTC 1 cut(s) 544
PfeI GAWTC 1 cut(s) 481
PkrI GCNGC 2 cut(s) 87, 189
Psp124BI GAGCTC 1 cut(s) 19
PspN4I GGNNCC 2 cut(s) 36, 196
PspPI GGNCC 1 cut(s) 194
PsuI RGATCY 1 cut(s) 415
PvuII CAGCTG 1 cut(s) 434
RsaI GTAC 1 cut(s) 354
RsaNI GTAC 1 cut(s) 353
RseI CAYNNNNRTG 1 cut(s) 521
SacI GAGCTC 1 cut(s) 19
SatI GCNGC 2 cut(s) 86, 188
Sau3AI GATC 3 cut(s) 46, 415, 525
Sau96I GGNCC 1 cut(s) 194
SduI GDGCHC 1 cut(s) 19
SetI ASST 6 cut(s) 19, 43, 189, 436, 445, 555
SfcI CTRYAG 1 cut(s) 42
SinI GGWCC 1 cut(s) 194
SmiMI CAYNNNNRTG 1 cut(s) 521
Sse9I AATT 3 cut(s) 252, 263, 544
SsiI CCGC 1 cut(s) 86
SspMI CTAG 1 cut(s) 20
SstI GAGCTC 1 cut(s) 19
StyI CCWWGG 3 cut(s) 301, 379, 530
TaaI ACNGT 2 cut(s) 145, 211
TaqI TCGA 3 cut(s) 76, 274, 372
TasI AATT 3 cut(s) 252, 263, 544
TauI GCSGC 1 cut(s) 88
TfiI GAWTC 1 cut(s) 481
TscAI CASTG 2 cut(s) 148, 214
TseFI GTSAC 1 cut(s) 139
TseI GCWGC 1 cut(s) 187
Tsp45I GTSAC 1 cut(s) 139
TspDTI ATGAA 1 cut(s) 276
TspGWI ACGGA 2 cut(s) 47, 489
TspRI CASTG 2 cut(s) 148, 214
VpaK11BI GGWCC 1 cut(s) 194
XapI RAATTY 2 cut(s) 252, 263
XmiI GTMKAC 1 cut(s) 178
XmnI GAANNNNTTC 1 cut(s) 544
XspI CTAG 1 cut(s) 20
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.