Rh3BG291300

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3B
Physical Location & Seq
Forward (+)
29161825 .. 29166856
5032 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3BG291300.1

Sequence Viewer

Length: 1428 bp
ATGGAGAACTTGAAAAAGCACTTGGAAGCTGAGCAGAAGCACCTTTCCGGGGATTCTCGACTTAAATGGAGGAAAGCAGCCGCTCCTAGAAGGTTCCGTGGTGTCGTTGATCTGGCAAACCAGGCCAGGGCTGAGATACAGGGTTTAGTTGAAGTTGCTGTTAAGGTTCTAAGAGCAGCAATACTACAGTTTGACAAAGATGGTGGTGATTATAATCCAGATAAAGAGAAACCAGTTCAAGATGAATACAAGCCTGAAGAGACATTAGAAGGTTTCAGCACTCACCAAGATGAGCTTGCATCTATCAAACGTGACCATGATATCAGGTCAGGTCCAAATTTGGTGGCAGACAGTGAACTTGCTATGGGCATAGCAGGAACCCAGGTTGCCAAAGAAGGTTCTGATGTTATCAAATTGGATGACAATTTTAGAACTGCAGGAAGTGTGGCCAGATGGAGTCGTCCATACATAAACATCCAAAAGTTTATGCGGTTCCAGTTAGCAATTAACGTTGTTGCTCTGGTGATCAATGCTGTTTCTGTATATGTTTCAGGAAACGTTCCCCTTACTGCTGTGCAATTGCTTTGGGTCAACCTGATTATGTACACTGTTGGTGCACGCGCACTTATACGAATGCCCCAGTTTTTGAAGGGTGCAAGCTTCATCACCGGGGGCATTTGGAGGAATATCATTGGTCAGAGTATCTATCAACTGACTGTCCTTGGAGTTCTCAATTTCTATGGGACGCAGCTACTAGGACTTACTAGTCCAGATGCAATTGCTGTTCTTGACACTGTGATATTCAACTCAATAGTGTTTTGCAAGATGATTCAGATGAATAGGGATGAAATAGAGATGATAAACACATTTGACAACTGGATATTGGTAGGATTCATGATTTGCACTTTGGCCTTCGAAGTTGTCATAGTTGAGTTCTTGGGAGTGGTTGCTAGCATTGTGCCACTATGGTTACTCGGCATTTTTATTGGATCAGTTAGCATGACTGTTGCAGTTGTCCTGGAGTGCACGCCTGTTGGAAGTTCAGCCAAAGGGACTGGTAATGGCATGGCCACAGAAGGACCGGAAATTCATAGATTCTCTGCTGAGCAGCTGAATGCTGTTATGAAGTTGGTCCAGGAAAAATTTCAAGTCGCTTTCCACTGTCCAAAAACAGCACTACTGAAGATCAATAACAGTGCCATATTTAGATCTGTTGGTGAAGTTAGAATCTCAGCTCAAATGATGCAATGTACCTGTGTGGTGTTGGCAACTTTTGTGGTTATAGTAAGGGTTGGGGATAACATTGATTTTGCCTTCTCCATGCTGACATTTTTGGTGAAGCAGAATATTAATGGTATTACAACCATCGTCAAATTTTGGCTTACTTTTGCGGTTGACTATGGTTATGCCTCCGACCCTCCGTGGTGA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

475

Amino Acids

52.52

Weight (kDa)

6.62

Isoelectric Point (pI)

31.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cation_ATPase_C PF00689 187 - 336 1.1e-10 Cation transporting ATPase, C-terminus
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 213
AasI GACNNNNNNGTC 1 cut(s) 765
AccBSI CCGCTC 1 cut(s) 83
AccII CGCG 1 cut(s) 621
AciI CCGC 3 cut(s) 81, 490, 1391
AclI AACGTT 2 cut(s) 510, 558
AclWI GGATC 1 cut(s) 997
AcoI YGGCCR 2 cut(s) 447, 1068
AcsI RAATTY 4 cut(s) 337, 1086, 1142, 1373
AcuI CTGAAG 2 cut(s) 276, 1202
AfaI GTAC 2 cut(s) 605, 1252
AfiI CCNNNNNNNGG 2 cut(s) 49, 127
AgsI TTSAA 6 cut(s) 13, 152, 239, 649, 805, 1148
AhlI ACTAGT 1 cut(s) 764
AjnI CCWGG 5 cut(s) 120, 125, 381, 1017, 1134
AjuI GAANNNNNNNTTGG 1 cut(s) 37
AluBI AGCT 6 cut(s) 29, 295, 660, 751, 1111, 1235
AluI AGCT 6 cut(s) 29, 295, 660, 751, 1111, 1235
Alw21I GWGCWC 2 cut(s) 619, 1028
Alw26I GTCTC 1 cut(s) 254
Alw44I GTGCAC 2 cut(s) 615, 1024
AlwI GGATC 1 cut(s) 997
AoxI GGCC 4 cut(s) 123, 447, 909, 1068
ApaLI GTGCAC 2 cut(s) 615, 1024
ApeKI GCWGC 4 cut(s) 77, 176, 748, 1108
ApoI RAATTY 4 cut(s) 337, 1086, 1142, 1373
AseI ATTAAT 1 cut(s) 1350
Asp700I GAANNNNTTC 1 cut(s) 1143
AspLEI GCGC 1 cut(s) 623
AspS9I GGNCC 3 cut(s) 332, 1079, 1132
AsuC2I CCSGG 2 cut(s) 49, 670
AsuHPI GGTGA 6 cut(s) 218, 275, 535, 658, 1229, 1348
AsuII TTCGAA 1 cut(s) 915
AsuNHI GCTAGC 1 cut(s) 950
AvaII GGWCC 3 cut(s) 332, 1079, 1132
BaeGI GKGCMC 2 cut(s) 619, 1028
BalI TGGCCA 2 cut(s) 449, 1070
Bbv12I GWGCWC 2 cut(s) 619, 1028
BbvI GCAGC 4 cut(s) 89, 188, 760, 1120
BccI CCATC 3 cut(s) 194, 447, 1373
BciT130I CCWGG 5 cut(s) 122, 127, 383, 1019, 1136
BclI TGATCA 1 cut(s) 525
BcnI CCSGG 2 cut(s) 49, 670
BcoDI GTCTC 1 cut(s) 254
BcuI ACTAGT 1 cut(s) 764
BfaI CTAG 4 cut(s) 87, 755, 765, 951
BfmI CTRYAG 2 cut(s) 185, 435
BglII AGATCT 1 cut(s) 1208
BisI GCNGC 5 cut(s) 78, 81, 177, 749, 1109
BlpI GCTNAGC 2 cut(s) 30, 1104
BlsI GCNGC 5 cut(s) 79, 82, 178, 750, 1110
Bme1390I CCNGG 7 cut(s) 49, 122, 127, 383, 670, 1019, 1136
Bme18I GGWCC 3 cut(s) 332, 1079, 1132
BmgT120I GGNCC 3 cut(s) 332, 1079, 1132
BmiI GGNNCC 3 cut(s) 95, 379, 494
BmrFI CCNGG 7 cut(s) 49, 122, 127, 383, 670, 1019, 1136
BmrI ACTGGG 1 cut(s) 634
BmsI GCATC 3 cut(s) 308, 763, 1233
BmtI GCTAGC 1 cut(s) 954
BmuI ACTGGG 1 cut(s) 634
BpmI CTGGAG 1 cut(s) 1040
Bpu1102I GCTNAGC 2 cut(s) 30, 1104
Bpu14I TTCGAA 1 cut(s) 915
BpuMI CCSGG 2 cut(s) 49, 670
BsaBI GATNNNNATC 1 cut(s) 213
BsaJI CCNNGG 7 cut(s) 48, 97, 126, 381, 669, 721, 1421
BsaWI WCCGGW 1 cut(s) 1081
Bsc4I CCNNNNNNNGG 2 cut(s) 49, 127
Bse1I ACTGG 5 cut(s) 233, 496, 640, 881, 1060
Bse3DI GCAATG 1 cut(s) 1253
Bse8I GATNNNNATC 1 cut(s) 213
BseBI CCWGG 5 cut(s) 122, 127, 383, 1019, 1136
BseDI CCNNGG 7 cut(s) 48, 97, 126, 381, 669, 721, 1421
BseGI GGATG 3 cut(s) 424, 474, 850
BseJI GATNNNNATC 1 cut(s) 213
BseLI CCNNNNNNNGG 2 cut(s) 49, 127
BseMI GCAATG 1 cut(s) 1253
BseMII CTCAG 4 cut(s) 21, 123, 1095, 1245
BseNI ACTGG 5 cut(s) 233, 496, 640, 881, 1060
BseSI GKGCMC 2 cut(s) 619, 1028
BseXI GCAGC 4 cut(s) 89, 188, 760, 1120
Bsh1236I CGCG 1 cut(s) 621
BshFI GGCC 4 cut(s) 125, 449, 911, 1070
BsiHKAI GWGCWC 2 cut(s) 619, 1028
BsiSI CCGG 3 cut(s) 48, 669, 1082
BslFI GGGAC 2 cut(s) 757, 1066
BslI CCNNNNNNNGG 2 cut(s) 49, 127
BsmAI GTCTC 1 cut(s) 254
BsmFI GGGAC 2 cut(s) 757, 1066
BsmI GAATGC 2 cut(s) 639, 1120
BsnI GGCC 4 cut(s) 125, 449, 911, 1070
Bsp119I TTCGAA 1 cut(s) 915
Bsp1286I GDGCHC 2 cut(s) 619, 1028
Bsp1407I TGTACA 1 cut(s) 603
Bsp143I GATC 5 cut(s) 109, 525, 989, 1185, 1208
Bsp1720I GCTNAGC 2 cut(s) 30, 1104
BspACI CCGC 3 cut(s) 81, 490, 1391
BspANI GGCC 4 cut(s) 125, 449, 911, 1070
BspCNI CTCAG 4 cut(s) 22, 124, 1096, 1244
BspFNI CGCG 1 cut(s) 621
BspHI TCATGA 1 cut(s) 894
BspLI GGNNCC 3 cut(s) 95, 379, 494
BspMAI CTGCAG 1 cut(s) 439
BspOI GCTAGC 1 cut(s) 954
BspPI GGATC 1 cut(s) 997
BspT104I TTCGAA 1 cut(s) 915
BsrBI CCGCTC 1 cut(s) 83
BsrDI GCAATG 1 cut(s) 1253
BsrGI TGTACA 1 cut(s) 603
BsrI ACTGG 5 cut(s) 233, 496, 640, 881, 1060
BssECI CCNNGG 7 cut(s) 48, 97, 126, 381, 669, 721, 1421
BssMI GATC 5 cut(s) 109, 525, 989, 1185, 1208
BssT1I CCWWGG 1 cut(s) 721
Bst2UI CCWGG 5 cut(s) 122, 127, 383, 1019, 1136
Bst4CI ACNGT 8 cut(s) 189, 353, 610, 718, 796, 1006, 1163, 1196
Bst6I CTCTTC 1 cut(s) 252
BstAUI TGTACA 1 cut(s) 603
BstBI TTCGAA 1 cut(s) 915
BstC8I GCNNGC 5 cut(s) 297, 619, 658, 952, 1028
BstDEI CTNAG 5 cut(s) 30, 132, 170, 1104, 1231
BstDSI CCRYGG 2 cut(s) 97, 1421
BstF5I GGATG 3 cut(s) 424, 474, 850
BstFNI CGCG 1 cut(s) 621
BstHHI GCGC 1 cut(s) 623
BstKTI GATC 5 cut(s) 112, 528, 992, 1188, 1211
BstMAI GTCTC 1 cut(s) 254
BstMBI GATC 5 cut(s) 109, 525, 989, 1185, 1208
BstMWI GCNNNNNNNGC 1 cut(s) 122
BstNI CCWGG 5 cut(s) 122, 127, 383, 1019, 1136
BstSCI CCNGG 7 cut(s) 47, 120, 125, 381, 668, 1017, 1134
BstSFI CTRYAG 2 cut(s) 185, 435
BstSLI GKGCMC 2 cut(s) 619, 1028
BstUI CGCG 1 cut(s) 621
BstV1I GCAGC 4 cut(s) 89, 188, 760, 1120
BstX2I RGATCY 1 cut(s) 1208
BstYI RGATCY 1 cut(s) 1208
BsuRI GGCC 4 cut(s) 125, 449, 911, 1070
BtgI CCRYGG 2 cut(s) 97, 1421
BtsCI GGATG 3 cut(s) 424, 474, 850
BtsIMutI CAGTG 5 cut(s) 358, 606, 792, 1159, 1201
Cac8I GCNNGC 5 cut(s) 297, 619, 658, 952, 1028
CciI TCATGA 1 cut(s) 894
CfoI GCGC 1 cut(s) 623
Cfr13I GGNCC 3 cut(s) 332, 1079, 1132
CseI GACGC 1 cut(s) 754
Csp6I GTAC 2 cut(s) 604, 1251
CspCI CAANNNNNGTGG 6 cut(s) 184, 219, 324, 359, 1257, 1292
CviAII CATG 5 cut(s) 317, 895, 1000, 1066, 1321
CviQI GTAC 2 cut(s) 604, 1251
DdeI CTNAG 5 cut(s) 30, 132, 170, 1104, 1231
DpnI GATC 5 cut(s) 111, 527, 991, 1187, 1210
DpnII GATC 5 cut(s) 109, 525, 989, 1185, 1208
DrdI GACNNNNNNGTC 1 cut(s) 765
DseDI GACNNNNNNGTC 1 cut(s) 765
EaeI YGGCCR 2 cut(s) 447, 1068
Eam1104I CTCTTC 1 cut(s) 252
EarI CTCTTC 1 cut(s) 252
Eco130I CCWWGG 1 cut(s) 721
Eco32I GATATC 1 cut(s) 322
Eco47I GGWCC 3 cut(s) 332, 1079, 1132
Eco57I CTGAAG 2 cut(s) 276, 1202
EcoRII CCWGG 5 cut(s) 120, 125, 381, 1017, 1134
EcoRV GATATC 1 cut(s) 322
EcoT14I CCWWGG 1 cut(s) 721
ErhI CCWWGG 1 cut(s) 721
FaeI CATG 5 cut(s) 320, 898, 1003, 1069, 1324
FalI AAGNNNNNCTT 2 cut(s) 279, 311
FaqI GGGAC 2 cut(s) 757, 1066
FatI CATG 5 cut(s) 316, 894, 999, 1065, 1320
FbaI TGATCA 1 cut(s) 525
Fnu4HI GCNGC 5 cut(s) 78, 81, 177, 749, 1109
FokI GGATG 3 cut(s) 431, 461, 857
Fsp4HI GCNGC 5 cut(s) 78, 81, 177, 749, 1109
FspBI CTAG 4 cut(s) 87, 755, 765, 951
GlaI GCGC 1 cut(s) 622
GluI GCNGC 5 cut(s) 78, 81, 177, 749, 1109
GsuI CTGGAG 1 cut(s) 1040
HaeIII GGCC 4 cut(s) 125, 449, 911, 1070
HapII CCGG 3 cut(s) 48, 669, 1082
HgaI GACGC 1 cut(s) 754
HhaI GCGC 1 cut(s) 623
Hin1II CATG 5 cut(s) 320, 898, 1003, 1069, 1324
Hin6I GCGC 1 cut(s) 621
HinP1I GCGC 1 cut(s) 621
HincII GTYRAC 2 cut(s) 592, 1396
HindII GTYRAC 2 cut(s) 592, 1396
HindIII AAGCTT 1 cut(s) 658
HinfI GANTC 6 cut(s) 53, 457, 829, 891, 1095, 1227
HpaII CCGG 3 cut(s) 48, 669, 1082
HphI GGTGA 6 cut(s) 218, 275, 535, 658, 1229, 1348
Hpy166II GTNNAC 6 cut(s) 356, 592, 606, 617, 1026, 1396
Hpy188I TCNGA 4 cut(s) 403, 699, 834, 1414
Hpy188III TCNNGA 7 cut(s) 57, 218, 239, 552, 770, 788, 895
Hpy8I GTNNAC 6 cut(s) 356, 592, 606, 617, 1026, 1396
HpyAV CCTTC 7 cut(s) 84, 263, 389, 643, 922, 1070, 1324
HpyCH4III ACNGT 8 cut(s) 189, 353, 610, 718, 796, 1006, 1163, 1196
HpyCH4IV ACGT 3 cut(s) 310, 510, 558
HpyF10VI GCNNNNNNNGC 1 cut(s) 122
HpyF3I CTNAG 5 cut(s) 30, 132, 170, 1104, 1231
HpySE526I ACGT 3 cut(s) 310, 510, 558
Hsp92II CATG 5 cut(s) 320, 898, 1003, 1069, 1324
HspAI GCGC 1 cut(s) 621
Ksp22I TGATCA 1 cut(s) 525
Kzo9I GATC 5 cut(s) 109, 525, 989, 1185, 1208
LmnI GCTCC 1 cut(s) 88
Lsp1109I GCAGC 4 cut(s) 89, 188, 760, 1120
LweI GCATC 3 cut(s) 308, 763, 1233
MaeI CTAG 4 cut(s) 87, 755, 765, 951
MaeII ACGT 3 cut(s) 310, 510, 558
MaeIII GTNAC 2 cut(s) 311, 969
MalI GATC 5 cut(s) 111, 527, 991, 1187, 1210
MbiI CCGCTC 1 cut(s) 83
MboI GATC 5 cut(s) 109, 525, 989, 1185, 1208
MboII GAAGA 2 cut(s) 269, 1195
MfeI CAATTG 2 cut(s) 578, 777
MflI RGATCY 1 cut(s) 1208
MhlI GDGCHC 2 cut(s) 619, 1028
MlsI TGGCCA 2 cut(s) 449, 1070
MluNI TGGCCA 2 cut(s) 449, 1070
MlyI GAGTC 1 cut(s) 466
MmeI TCCRAC 1 cut(s) 1015
MnlI CCTC 4 cut(s) 63, 675, 1420, 1428
Mox20I TGGCCA 2 cut(s) 449, 1070
MroXI GAANNNNTTC 1 cut(s) 1143
MscI TGGCCA 2 cut(s) 449, 1070
MseI TTAA 4 cut(s) 63, 162, 507, 1350
MslI CAYNNNNRTG 1 cut(s) 288
Msp20I TGGCCA 2 cut(s) 449, 1070
MspA1I CMGCKG 1 cut(s) 1111
MspI CCGG 3 cut(s) 48, 669, 1082
MspR9I CCNGG 7 cut(s) 49, 122, 127, 383, 670, 1019, 1136
MunI CAATTG 2 cut(s) 578, 777
Mva1269I GAATGC 2 cut(s) 639, 1120
MvaI CCWGG 5 cut(s) 122, 127, 383, 1019, 1136
MvnI CGCG 1 cut(s) 621
MwoI GCNNNNNNNGC 1 cut(s) 122
NciI CCSGG 2 cut(s) 49, 670
NdeII GATC 5 cut(s) 109, 525, 989, 1185, 1208
NheI GCTAGC 1 cut(s) 950
NlaIII CATG 5 cut(s) 320, 898, 1003, 1069, 1324
NlaIV GGNNCC 3 cut(s) 95, 379, 494
NmeAIII GCCGAG 1 cut(s) 954
NmuCI GTSAC 1 cut(s) 311
NspV TTCGAA 1 cut(s) 915
PagI TCATGA 1 cut(s) 894
PctI GAATGC 2 cut(s) 639, 1120
PdmI GAANNNNTTC 1 cut(s) 1143
PfeI GAWTC 5 cut(s) 53, 829, 891, 1095, 1227
PfoI TCCNGGA 2 cut(s) 1017, 1134
PkrI GCNGC 5 cut(s) 79, 82, 178, 750, 1110
PleI GAGTC 1 cut(s) 465
PpsI GAGTC 1 cut(s) 465
PshBI ATTAAT 1 cut(s) 1350
PsiI TTATAA 1 cut(s) 213
Psp1406I AACGTT 2 cut(s) 510, 558
Psp6I CCWGG 5 cut(s) 120, 125, 381, 1017, 1134
PspGI CCWGG 5 cut(s) 120, 125, 381, 1017, 1134
PspN4I GGNNCC 3 cut(s) 95, 379, 494
PspPI GGNCC 3 cut(s) 332, 1079, 1132
PstI CTGCAG 1 cut(s) 439
PsuI RGATCY 1 cut(s) 1208
PvuII CAGCTG 1 cut(s) 1111
RsaI GTAC 2 cut(s) 605, 1252
RsaNI GTAC 2 cut(s) 604, 1251
RseI CAYNNNNRTG 1 cut(s) 288
SaqAI TTAA 4 cut(s) 63, 162, 507, 1350
SatI GCNGC 5 cut(s) 78, 81, 177, 749, 1109
Sau3AI GATC 5 cut(s) 109, 525, 989, 1185, 1208
Sau96I GGNCC 3 cut(s) 332, 1079, 1132
SchI GAGTC 1 cut(s) 466
ScrFI CCNGG 7 cut(s) 49, 122, 127, 383, 670, 1019, 1136
SduI GDGCHC 2 cut(s) 619, 1028
SfaNI GCATC 3 cut(s) 308, 763, 1233
SfcI CTRYAG 2 cut(s) 185, 435
SfuI TTCGAA 1 cut(s) 915
SinI GGWCC 3 cut(s) 332, 1079, 1132
SmiMI CAYNNNNRTG 1 cut(s) 288
SpeI ACTAGT 1 cut(s) 764
SsiI CCGC 3 cut(s) 81, 490, 1391
SspI AATATT 1 cut(s) 1348
SspMI CTAG 4 cut(s) 87, 755, 765, 951
StyD4I CCNGG 7 cut(s) 47, 120, 125, 381, 668, 1017, 1134
StyI CCWWGG 1 cut(s) 721
TaaI ACNGT 8 cut(s) 189, 353, 610, 718, 796, 1006, 1163, 1196
TaiI ACGT 3 cut(s) 313, 513, 561
TaqI TCGA 2 cut(s) 58, 915
TatI WGTACW 1 cut(s) 603
TauI GCSGC 1 cut(s) 83
TfiI GAWTC 5 cut(s) 53, 829, 891, 1095, 1227
Tru1I TTAA 4 cut(s) 63, 162, 507, 1350
Tru9I TTAA 4 cut(s) 63, 162, 507, 1350
TscAI CASTG 5 cut(s) 358, 613, 799, 1166, 1201
TseFI GTSAC 1 cut(s) 311
TseI GCWGC 4 cut(s) 77, 176, 748, 1108
Tsp45I GTSAC 1 cut(s) 311
TspDTI ATGAA 7 cut(s) 258, 652, 851, 861, 883, 1079, 1139
TspGWI ACGGA 2 cut(s) 86, 1410
TspRI CASTG 5 cut(s) 358, 613, 799, 1166, 1201
VneI GTGCAC 2 cut(s) 615, 1024
VpaK11BI GGWCC 3 cut(s) 332, 1079, 1132
VspI ATTAAT 1 cut(s) 1350
XapI RAATTY 4 cut(s) 337, 1086, 1142, 1373
XmnI GAANNNNTTC 1 cut(s) 1143
XspI CTAG 4 cut(s) 87, 755, 765, 951
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.