Rh3AG254200

This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the transport of calcium

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
27667704 .. 27672315
4612 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG254200.1

Sequence Viewer

Length: 1050 bp
ATGGAGAACTACTACTTGAAAAAGCACTTGGAAGCTGAGCAGAAGCACCTTTCCACGGATTCTCGACGTAAATGGAGGAAAGCAGCCGCTCTTCTCCGTTCTAGAAGGTTCCGTGGTGTCGTTGATCTGGCAAACCAGGCCAGGGCTGAGATACAGGGTTCAGTTGAAGTTGCTGTTAAGGTTCAAAGAGCAGCAATACTACAGTTTGACAAAGATGAGCTTGCATCTATCAAACGTGACCATGATATTGGGTCAGGTCAAAATATGGTGGCAGACAATGAACTTGCTATGGGTATAGCAGGAACCCAGATGCTTCAGATGAATAGGCATGAAATAGAGATGATAAACACATTTGACAACTGGATATTGGTAGGAATCATGATTTGCACTTTGGCCTTTGAAGTTGTCATAGTTGAGTTCTTGGGAGTGGTTGCTAGCATTGTCCCACTATGGGGACTCACCATTTTTATTGGATCAGTTAGCATGACTGTTGCATTTGTCCCGGAGTGCATGCCTGTTGGAAACTCAGCCAAAGGGACTGGTGATGGCTTGGCCACAGAAGGACCGGAAATTCATAGATTCTCCGCTGAGCAGCTGAATGCTGTTAGGAAGTTGGTCCAGGAAAATTTCCAAGTCGCTTTTCATGGTCCAAAAACGGCACTACTGAAGATCAATTACAGTGCCATATTTAGATCTGTTGGTGAAGTTAGAATCTCAGCTCAAATGATGCAATGCACCTTTGTGGTGTTGGCAACTTTTGTGGTTATTGTAAGGGTTGGGGATGACATTGATTTTGCCTTCTCCATGCTGACATTTTTGGTGAAGCAGAATATTAATGGTATTACAACCATCGTCAAATTTTGGGTTGCTTTTGCGGTTGACTATGGTTATGCCTCCGTGGTGATAGCTTTACTGGTAATGATAAAAATAGTGGTGGAAAAAGTGCGTTGCAACGAGATCAATAATTGGTCTTCGGGAGATGCAACTAGATTTGTCGTCGATTATGCTCTTGCAATGTTAGAGTATTTACTCTTCCATAAAATAGATTAG
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

349

Amino Acids

38.98

Weight (kDa)

6.67

Isoelectric Point (pI)

30.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 89
AciI CCGC 3 cut(s) 87, 585, 875
AclWI GGATC 1 cut(s) 481
AcoI YGGCCR 1 cut(s) 552
AcsI RAATTY 3 cut(s) 570, 625, 857
AcuI CTGAAG 2 cut(s) 299, 686
AfiI CCNNNNNNNGG 4 cut(s) 55, 142, 451, 452
AgsI TTSAA 4 cut(s) 19, 167, 185, 401
AjnI CCWGG 3 cut(s) 135, 140, 618
AjuI GAANNNNNNNTTGG 4 cut(s) 11, 43, 624, 656
AleI CACNNNNGTG 1 cut(s) 740
AluBI AGCT 5 cut(s) 35, 220, 595, 719, 908
AluI AGCT 5 cut(s) 35, 220, 595, 719, 908
AlwI GGATC 1 cut(s) 481
AoxI GGCC 3 cut(s) 138, 393, 552
ApeKI GCWGC 3 cut(s) 83, 191, 592
ApoI RAATTY 3 cut(s) 570, 625, 857
ArsI GACNNNNNNTTYG 2 cut(s) 776, 808
AseI ATTAAT 1 cut(s) 834
AspS9I GGNCC 3 cut(s) 563, 616, 647
AsuC2I CCSGG 1 cut(s) 503
AsuHPI GGTGA 5 cut(s) 451, 554, 713, 832, 913
AsuNHI GCTAGC 1 cut(s) 434
AvaII GGWCC 3 cut(s) 563, 616, 647
BalI TGGCCA 1 cut(s) 554
BarI GAAGNNNNNNTAC 4 cut(s) 659, 691, 1016, 1048
BbsI GAAGAC 1 cut(s) 963
BbvI GCAGC 3 cut(s) 95, 203, 604
BccI CCATC 2 cut(s) 539, 857
BceAI ACGGC 1 cut(s) 672
BciT130I CCWGG 3 cut(s) 137, 142, 620
BcnI CCSGG 1 cut(s) 503
BfaI CTAG 3 cut(s) 102, 435, 987
BfmI CTRYAG 1 cut(s) 200
BglII AGATCT 1 cut(s) 692
BisI GCNGC 4 cut(s) 84, 87, 192, 593
BlpI GCTNAGC 2 cut(s) 36, 588
BlsI GCNGC 4 cut(s) 85, 88, 193, 594
Bme1390I CCNGG 4 cut(s) 137, 142, 503, 620
Bme18I GGWCC 3 cut(s) 563, 616, 647
BmgT120I GGNCC 3 cut(s) 563, 616, 647
BmiI GGNNCC 2 cut(s) 110, 304
BmrFI CCNGG 4 cut(s) 137, 142, 503, 620
BmsI GCATC 4 cut(s) 233, 300, 717, 970
BmtI GCTAGC 1 cut(s) 438
BpiI GAAGAC 1 cut(s) 963
Bpu1102I GCTNAGC 2 cut(s) 36, 588
BpuMI CCSGG 1 cut(s) 503
BsaJI CCNNGG 4 cut(s) 54, 112, 141, 897
BsaWI WCCGGW 1 cut(s) 565
Bsc4I CCNNNNNNNGG 4 cut(s) 55, 142, 451, 452
Bse1I ACTGG 3 cut(s) 365, 544, 918
Bse3DI GCAATG 2 cut(s) 737, 1020
BseBI CCWGG 3 cut(s) 137, 142, 620
BseDI CCNNGG 4 cut(s) 54, 112, 141, 897
BseGI GGATG 1 cut(s) 787
BseLI CCNNNNNNNGG 4 cut(s) 55, 142, 451, 452
BseMI GCAATG 2 cut(s) 737, 1020
BseMII CTCAG 5 cut(s) 27, 138, 540, 579, 729
BseNI ACTGG 3 cut(s) 365, 544, 918
BseXI GCAGC 3 cut(s) 95, 203, 604
BshFI GGCC 3 cut(s) 140, 395, 554
BsiSI CCGG 2 cut(s) 503, 566
BslFI GGGAC 4 cut(s) 428, 468, 485, 550
BslI CCNNNNNNNGG 4 cut(s) 55, 142, 451, 452
BsmFI GGGAC 4 cut(s) 428, 468, 485, 550
BsmI GAATGC 1 cut(s) 604
BsnI GGCC 3 cut(s) 140, 395, 554
Bsp143I GATC 5 cut(s) 124, 473, 669, 692, 957
Bsp1720I GCTNAGC 2 cut(s) 36, 588
BspACI CCGC 3 cut(s) 87, 585, 875
BspANI GGCC 3 cut(s) 140, 395, 554
BspCNI CTCAG 5 cut(s) 28, 139, 539, 580, 728
BspHI TCATGA 1 cut(s) 378
BspLI GGNNCC 2 cut(s) 110, 304
BspOI GCTAGC 1 cut(s) 438
BspPI GGATC 1 cut(s) 481
BspQI GCTCTTC 1 cut(s) 96
BsrBI CCGCTC 1 cut(s) 89
BsrDI GCAATG 2 cut(s) 737, 1020
BsrI ACTGG 3 cut(s) 365, 544, 918
BssECI CCNNGG 4 cut(s) 54, 112, 141, 897
BssMI GATC 5 cut(s) 124, 473, 669, 692, 957
Bst2UI CCWGG 3 cut(s) 137, 142, 620
Bst4CI ACNGT 3 cut(s) 204, 490, 680
Bst6I CTCTTC 2 cut(s) 96, 1037
BstC8I GCNNGC 3 cut(s) 222, 436, 512
BstDEI CTNAG 5 cut(s) 36, 147, 526, 588, 715
BstDSI CCRYGG 3 cut(s) 54, 112, 897
BstF5I GGATG 1 cut(s) 787
BstKTI GATC 5 cut(s) 127, 476, 672, 695, 960
BstMBI GATC 5 cut(s) 124, 473, 669, 692, 957
BstMWI GCNNNNNNNGC 1 cut(s) 137
BstNI CCWGG 3 cut(s) 137, 142, 620
BstNSI RCATGY 1 cut(s) 514
BstSCI CCNGG 4 cut(s) 135, 140, 501, 618
BstSFI CTRYAG 1 cut(s) 200
BstV1I GCAGC 3 cut(s) 95, 203, 604
BstV2I GAAGAC 1 cut(s) 963
BstX2I RGATCY 1 cut(s) 692
BstXI CCANNNNNNTGG 1 cut(s) 248
BstYI RGATCY 1 cut(s) 692
BsuRI GGCC 3 cut(s) 140, 395, 554
BtgI CCRYGG 3 cut(s) 54, 112, 897
BtsCI GGATG 1 cut(s) 787
BtsIMutI CAGTG 1 cut(s) 685
Cac8I GCNNGC 3 cut(s) 222, 436, 512
CciI TCATGA 1 cut(s) 378
Cfr13I GGNCC 3 cut(s) 563, 616, 647
CspCI CAANNNNNGTGG 2 cut(s) 741, 776
CviAII CATG 7 cut(s) 242, 329, 379, 484, 511, 644, 805
DdeI CTNAG 5 cut(s) 36, 147, 526, 588, 715
DpnI GATC 5 cut(s) 126, 475, 671, 694, 959
DpnII GATC 5 cut(s) 124, 473, 669, 692, 957
EaeI YGGCCR 1 cut(s) 552
Eam1104I CTCTTC 2 cut(s) 96, 1037
EarI CTCTTC 2 cut(s) 96, 1037
Eco47I GGWCC 3 cut(s) 563, 616, 647
Eco57I CTGAAG 2 cut(s) 299, 686
EcoRII CCWGG 3 cut(s) 135, 140, 618
FaeI CATG 7 cut(s) 245, 332, 382, 487, 514, 647, 808
FalI AAGNNNNNCTT 2 cut(s) 204, 236
FaqI GGGAC 4 cut(s) 428, 468, 485, 550
FatI CATG 7 cut(s) 241, 328, 378, 483, 510, 643, 804
Fnu4HI GCNGC 4 cut(s) 84, 87, 192, 593
FokI GGATG 1 cut(s) 794
Fsp4HI GCNGC 4 cut(s) 84, 87, 192, 593
FspBI CTAG 3 cut(s) 102, 435, 987
GluI GCNGC 4 cut(s) 84, 87, 192, 593
HaeIII GGCC 3 cut(s) 140, 395, 554
HapII CCGG 2 cut(s) 503, 566
Hin1II CATG 7 cut(s) 245, 332, 382, 487, 514, 647, 808
HincII GTYRAC 1 cut(s) 880
HindII GTYRAC 1 cut(s) 880
HinfI GANTC 5 cut(s) 59, 375, 456, 579, 711
HpaII CCGG 2 cut(s) 503, 566
HphI GGTGA 5 cut(s) 451, 554, 713, 832, 913
Hpy166II GTNNAC 1 cut(s) 880
Hpy188I TCNGA 1 cut(s) 318
Hpy188III TCNNGA 4 cut(s) 63, 102, 379, 975
Hpy8I GTNNAC 1 cut(s) 880
Hpy99I CGWCG 2 cut(s) 69, 1001
HpyAV CCTTC 3 cut(s) 99, 554, 808
HpyCH4III ACNGT 3 cut(s) 204, 490, 680
HpyCH4IV ACGT 2 cut(s) 67, 235
HpyCH4V TGCA 9 cut(s) 224, 387, 494, 510, 730, 735, 951, 983, 1013
HpyF10VI GCNNNNNNNGC 1 cut(s) 137
HpyF3I CTNAG 5 cut(s) 36, 147, 526, 588, 715
HpySE526I ACGT 2 cut(s) 67, 235
Hsp92II CATG 7 cut(s) 245, 332, 382, 487, 514, 647, 808
Kzo9I GATC 5 cut(s) 124, 473, 669, 692, 957
LguI GCTCTTC 1 cut(s) 96
Lsp1109I GCAGC 3 cut(s) 95, 203, 604
LweI GCATC 4 cut(s) 233, 300, 717, 970
MaeI CTAG 3 cut(s) 102, 435, 987
MaeII ACGT 2 cut(s) 67, 235
MaeIII GTNAC 1 cut(s) 236
MalI GATC 5 cut(s) 126, 475, 671, 694, 959
MbiI CCGCTC 1 cut(s) 89
MboI GATC 5 cut(s) 124, 473, 669, 692, 957
MboII GAAGA 4 cut(s) 83, 679, 963, 1024
MflI RGATCY 1 cut(s) 692
MlsI TGGCCA 1 cut(s) 554
MluCI AATT 5 cut(s) 570, 625, 673, 857, 964
MluNI TGGCCA 1 cut(s) 554
MlyI GAGTC 1 cut(s) 450
MmeI TCCRAC 1 cut(s) 499
MnlI CCTC 2 cut(s) 69, 904
Mox20I TGGCCA 1 cut(s) 554
MscI TGGCCA 1 cut(s) 554
MseI TTAA 2 cut(s) 177, 834
MslI CAYNNNNRTG 1 cut(s) 740
Msp20I TGGCCA 1 cut(s) 554
MspA1I CMGCKG 2 cut(s) 587, 595
MspI CCGG 2 cut(s) 503, 566
MspR9I CCNGG 4 cut(s) 137, 142, 503, 620
Mva1269I GAATGC 1 cut(s) 604
MvaI CCWGG 3 cut(s) 137, 142, 620
MwoI GCNNNNNNNGC 1 cut(s) 137
NciI CCSGG 1 cut(s) 503
NdeII GATC 5 cut(s) 124, 473, 669, 692, 957
NheI GCTAGC 1 cut(s) 434
NlaIII CATG 7 cut(s) 245, 332, 382, 487, 514, 647, 808
NlaIV GGNNCC 2 cut(s) 110, 304
NmuCI GTSAC 1 cut(s) 236
NspI RCATGY 1 cut(s) 514
OliI CACNNNNGTG 1 cut(s) 740
PaeI GCATGC 1 cut(s) 514
PagI TCATGA 1 cut(s) 378
PciSI GCTCTTC 1 cut(s) 96
PctI GAATGC 1 cut(s) 604
PfeI GAWTC 4 cut(s) 59, 375, 579, 711
PfoI TCCNGGA 2 cut(s) 501, 618
PkrI GCNGC 4 cut(s) 85, 88, 193, 594
PleI GAGTC 1 cut(s) 450
PpsI GAGTC 1 cut(s) 450
PshBI ATTAAT 1 cut(s) 834
Psp6I CCWGG 3 cut(s) 135, 140, 618
PspGI CCWGG 3 cut(s) 135, 140, 618
PspN4I GGNNCC 2 cut(s) 110, 304
PspPI GGNCC 3 cut(s) 563, 616, 647
PsuI RGATCY 1 cut(s) 692
PvuII CAGCTG 1 cut(s) 595
RseI CAYNNNNRTG 1 cut(s) 740
SapI GCTCTTC 1 cut(s) 96
SaqAI TTAA 2 cut(s) 177, 834
SatI GCNGC 4 cut(s) 84, 87, 192, 593
Sau3AI GATC 5 cut(s) 124, 473, 669, 692, 957
Sau96I GGNCC 3 cut(s) 563, 616, 647
SchI GAGTC 1 cut(s) 450
ScrFI CCNGG 4 cut(s) 137, 142, 503, 620
SfaNI GCATC 4 cut(s) 233, 300, 717, 970
SfcI CTRYAG 1 cut(s) 200
SinI GGWCC 3 cut(s) 563, 616, 647
SmiMI CAYNNNNRTG 1 cut(s) 740
SphI GCATGC 1 cut(s) 514
Sse9I AATT 5 cut(s) 570, 625, 673, 857, 964
SsiI CCGC 3 cut(s) 87, 585, 875
SspI AATATT 1 cut(s) 832
SspMI CTAG 3 cut(s) 102, 435, 987
StyD4I CCNGG 4 cut(s) 135, 140, 501, 618
TaaI ACNGT 3 cut(s) 204, 490, 680
TaiI ACGT 2 cut(s) 70, 238
TaqI TCGA 2 cut(s) 64, 999
TasI AATT 5 cut(s) 570, 625, 673, 857, 964
TauI GCSGC 1 cut(s) 89
TfiI GAWTC 4 cut(s) 59, 375, 579, 711
Tru1I TTAA 2 cut(s) 177, 834
Tru9I TTAA 2 cut(s) 177, 834
TscAI CASTG 1 cut(s) 685
TseFI GTSAC 1 cut(s) 236
TseI GCWGC 3 cut(s) 83, 191, 592
Tsp45I GTSAC 1 cut(s) 236
TspDTI ATGAA 5 cut(s) 294, 335, 345, 563, 632
TspGWI ACGGA 4 cut(s) 71, 86, 101, 886
TspRI CASTG 1 cut(s) 685
VpaK11BI GGWCC 3 cut(s) 563, 616, 647
VspI ATTAAT 1 cut(s) 834
XapI RAATTY 3 cut(s) 570, 625, 857
XbaI TCTAGA 1 cut(s) 101
XceI RCATGY 1 cut(s) 514
XspI CTAG 3 cut(s) 102, 435, 987
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.