pycom17g01910

Protein of unknown function (DUF707)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0001946
Physical Location & Seq
Forward (+)
1200363 .. 1203113
2751 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1209 bp
ATGGTGTCTCCCATACGCATCGGAAATTTGAGAAACCCTAATGAGACAATGAGGCTTGTGGTGACGATCTTTGTTGGTGTTGTAATCGGATTCTTTGTAGGAGTATCTTTTCCAACACTTTCGTTAACTAAGATGAATCTTCCTTCCACCCTTTTCCCTTCGATTGATCTTTCGTACATAGAGGAAAAGTACTATGGGTTTTCAACCCAAGCACTGTTGAATGCCTGGTCTTCTTTGAAGGGAAACGAAGTGCGCACTGAAAAATATGTATCTCAGGAGACAAAGATTTGGGTTCCAACTAATCCTCGAGGGGCTGAAAGCCTACCGCCTGGTATCGTTGCATCTGAATCGGATTTCTATCTTCGCCGACTATGGGGCCTGCCCAGTGAGGACTTACTTGTCAAGCCAAAGTATCTTGTAACCTTTACTGTAGGTTATGCTCAGAAAAAAAATGTTGATGCAGCTGTTAAAAAGTTTTCAGAGAATTTCACCATACTCTTGTTTCACTATGATGGTTTGACAAGTGAATGGGATGAATTTGAATGGTCGAAGCGGGCTATCCACGTGAGCATACAGAAGCAAACTAAATGGTGGTATGCCAAGCGGTTTTTGCATCCTGACATTGTGGCACCCTACGAATACATATTTATTTGGGATGAGGATCTCGGTTTGGAGCACTTTAATGCAGAGAAATACATAAAGTTGGTCAAGAAACATGGTTTGGAAATATCACAGCCTGGTTTAGAACCGAATAGCGGGCTAACATGGCAGATGACGAAGCGGAGAGGTGATAGTGAAGTTCACATGCAGACAGAGGAGAAACCTGGTTGGTGCAACGATCCGCATTTGCCACCATGTGCAGCGTTTGTTGAAATTATGGCACCTGTGTTTTCTCGCAACGCATGGCGTTGTGTTTGGCATATGATTCAGAATGACCTGGTCCATGGCTGGGGTCTGGATTTTGCTCTTAGACATTGTGTAGCGCCTGCACATAAGAAAATAGGAGTCGTGGATGCGCAGTGGATTGTCCATCAAGGCGTTCCTTCACTCGGGAACCAAGGGAAAGCGGAGGGTGGAAGAGCGCCATGGGAAGGGGTAAGGGAGAGGTGCAGAAGAGAATGGACGATGTTTCAGGCACGAATGGCAAGCGCCGAGAAAGCATATTTTGAGGAAATGGGAATTGATCCTCCAAGTTCAACAGCTCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF707

Protein Analysis

403

Amino Acids

46.05

Weight (kDa)

7.22

Isoelectric Point (pI)

40.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF707 PF05212 100 - 386 8.3e-141 Protein of unknown function (DUF707)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 398
AbsI CCTCGAGG 1 cut(s) 306
Acc16I TGCGCA 2 cut(s) 254, 1017
AccB1I GGYRCC 2 cut(s) 628, 880
AciI CCGC 7 cut(s) 326, 553, 604, 756, 781, 842, 1067
AclWI GGATC 3 cut(s) 669, 833, 1178
AcsI RAATTY 3 cut(s) 25, 484, 536
AcvI CACGTG 1 cut(s) 565
AdeI CACNNNGTG 1 cut(s) 857
AfaI GTAC 2 cut(s) 176, 191
AfiI CCNNNNNNNGG 5 cut(s) 373, 755, 949, 1049, 1091
AgsI TTSAA 6 cut(s) 204, 220, 238, 542, 872, 1197
AjnI CCWGG 5 cut(s) 224, 328, 736, 823, 936
AjuI GAANNNNNNNTTGG 2 cut(s) 704, 736
AluBI AGCT 2 cut(s) 464, 1202
AluI AGCT 2 cut(s) 464, 1202
Alw21I GWGCWC 1 cut(s) 678
Alw26I GTCTC 3 cut(s) 12, 38, 272
AlwI GGATC 3 cut(s) 669, 833, 1178
Ama87I CYCGRG 2 cut(s) 306, 1049
AoxI GGCC 1 cut(s) 376
ApeKI GCWGC 2 cut(s) 461, 860
ApoI RAATTY 3 cut(s) 25, 484, 536
AspLEI GCGC 5 cut(s) 255, 985, 1018, 1084, 1151
AspS9I GGNCC 2 cut(s) 376, 940
AsuHPI GGTGA 3 cut(s) 73, 481, 800
AvaI CYCGRG 2 cut(s) 306, 1049
AvaII GGWCC 1 cut(s) 940
BanI GGYRCC 2 cut(s) 628, 880
BbrPI CACGTG 1 cut(s) 565
BbsI GAAGAC 1 cut(s) 222
Bbv12I GWGCWC 1 cut(s) 678
BbvI GCAGC 2 cut(s) 473, 872
BccI CCATC 2 cut(s) 506, 1038
BcgI CGANNNNNNTGC 2 cut(s) 330, 364
BciT130I CCWGG 5 cut(s) 226, 330, 738, 825, 938
BcoDI GTCTC 3 cut(s) 12, 38, 272
BfmI CTRYAG 1 cut(s) 429
BfoI RGCGCY 3 cut(s) 986, 1085, 1152
BisI GCNGC 2 cut(s) 462, 861
BlsI GCNGC 2 cut(s) 463, 862
BmcAI AGTACT 1 cut(s) 191
Bme1390I CCNGG 5 cut(s) 226, 330, 738, 825, 938
Bme18I GGWCC 1 cut(s) 940
BmeT110I CYCGRG 2 cut(s) 306, 1049
BmgT120I GGNCC 2 cut(s) 376, 940
BmiI GGNNCC 5 cut(s) 294, 377, 630, 882, 1055
BmrFI CCNGG 5 cut(s) 226, 330, 738, 825, 938
BmrI ACTGGG 1 cut(s) 378
BmsI GCATC 5 cut(s) 27, 350, 448, 622, 1003
BmuI ACTGGG 1 cut(s) 378
BpiI GAAGAC 1 cut(s) 222
BsaAI YACGTR 1 cut(s) 565
BsaBI GATNNNNATC 2 cut(s) 357, 660
BsaJI CCNNGG 3 cut(s) 943, 1057, 1085
Bsc4I CCNNNNNNNGG 5 cut(s) 373, 755, 949, 1049, 1091
Bse1I ACTGG 1 cut(s) 384
Bse8I GATNNNNATC 2 cut(s) 357, 660
BseBI CCWGG 5 cut(s) 226, 330, 738, 825, 938
BseDI CCNNGG 3 cut(s) 943, 1057, 1085
BseGI GGATG 4 cut(s) 538, 613, 661, 1018
BseJI GATNNNNATC 2 cut(s) 357, 660
BseLI CCNNNNNNNGG 5 cut(s) 373, 755, 949, 1049, 1091
BseMII CTCAG 2 cut(s) 287, 455
BseNI ACTGG 1 cut(s) 384
BseRI GAGGAG 1 cut(s) 830
BseXI GCAGC 2 cut(s) 473, 872
BseYI CCCAGC 1 cut(s) 948
BsgI GTGCAG 3 cut(s) 879, 972, 1129
BshFI GGCC 1 cut(s) 378
BshNI GGYRCC 2 cut(s) 628, 880
BsiHKAI GWGCWC 1 cut(s) 678
BsiHKCI CYCGRG 2 cut(s) 306, 1049
BslI CCNNNNNNNGG 5 cut(s) 373, 755, 949, 1049, 1091
BsmAI GTCTC 3 cut(s) 12, 38, 272
BsmI GAATGC 1 cut(s) 226
BsnI GGCC 1 cut(s) 378
BsoBI CYCGRG 2 cut(s) 306, 1049
Bsp1286I GDGCHC 1 cut(s) 678
Bsp143I GATC 5 cut(s) 66, 166, 661, 838, 1183
Bsp19I CCATGG 2 cut(s) 943, 1085
BspACI CCGC 7 cut(s) 326, 553, 604, 756, 781, 842, 1067
BspANI GGCC 1 cut(s) 378
BspCNI CTCAG 2 cut(s) 286, 454
BspLI GGNNCC 5 cut(s) 294, 377, 630, 882, 1055
BspPI GGATC 3 cut(s) 669, 833, 1178
BspQI GCTCTTC 1 cut(s) 1072
BspT107I GGYRCC 2 cut(s) 628, 880
BsrI ACTGG 1 cut(s) 384
BssECI CCNNGG 3 cut(s) 943, 1057, 1085
BssMI GATC 5 cut(s) 66, 166, 661, 838, 1183
BssT1I CCWWGG 3 cut(s) 943, 1057, 1085
Bst2UI CCWGG 5 cut(s) 226, 330, 738, 825, 938
Bst4CI ACNGT 2 cut(s) 216, 430
Bst6I CTCTTC 2 cut(s) 1072, 1108
BstBAI YACGTR 1 cut(s) 565
BstC8I GCNNGC 5 cut(s) 380, 555, 758, 987, 1147
BstDEI CTNAG 4 cut(s) 129, 273, 441, 968
BstDSI CCRYGG 2 cut(s) 943, 1085
BstF5I GGATG 4 cut(s) 538, 613, 661, 1018
BstH2I RGCGCY 3 cut(s) 986, 1085, 1152
BstHHI GCGC 5 cut(s) 255, 985, 1018, 1084, 1151
BstKTI GATC 5 cut(s) 69, 169, 664, 841, 1186
BstMAI GTCTC 3 cut(s) 12, 38, 272
BstMBI GATC 5 cut(s) 66, 166, 661, 838, 1183
BstMWI GCNNNNNNNGC 4 cut(s) 610, 766, 1142, 1157
BstNI CCWGG 5 cut(s) 226, 330, 738, 825, 938
BstNSI RCATGY 1 cut(s) 808
BstSCI CCNGG 5 cut(s) 224, 328, 736, 823, 936
BstSFI CTRYAG 1 cut(s) 429
BstV1I GCAGC 2 cut(s) 473, 872
BstV2I GAAGAC 1 cut(s) 222
BstX2I RGATCY 1 cut(s) 661
BstYI RGATCY 1 cut(s) 661
BsuRI GGCC 1 cut(s) 378
BtgI CCRYGG 2 cut(s) 943, 1085
BtsCI GGATG 4 cut(s) 538, 613, 661, 1018
BtsI GCAGTG 1 cut(s) 1025
BtsIMutI CAGTG 4 cut(s) 212, 255, 391, 1025
Cac8I GCNNGC 5 cut(s) 380, 555, 758, 987, 1147
CfoI GCGC 5 cut(s) 255, 985, 1018, 1084, 1151
Cfr13I GGNCC 2 cut(s) 376, 940
CsiI ACCWGGT 2 cut(s) 823, 936
Csp6I GTAC 2 cut(s) 175, 190
CviAII CATG 7 cut(s) 716, 765, 805, 855, 903, 944, 1086
CviQI GTAC 2 cut(s) 175, 190
DdeI CTNAG 4 cut(s) 129, 273, 441, 968
DpnI GATC 5 cut(s) 68, 168, 663, 840, 1185
DpnII GATC 5 cut(s) 66, 166, 661, 838, 1183
DraIII CACNNNGTG 1 cut(s) 857
DrdI GACNNNNNNGTC 1 cut(s) 398
DseDI GACNNNNNNGTC 1 cut(s) 398
Eam1104I CTCTTC 2 cut(s) 1072, 1108
EarI CTCTTC 2 cut(s) 1072, 1108
Eco130I CCWWGG 3 cut(s) 943, 1057, 1085
Eco47I GGWCC 1 cut(s) 940
Eco72I CACGTG 1 cut(s) 565
Eco88I CYCGRG 2 cut(s) 306, 1049
EcoO109I RGGNCCY 1 cut(s) 376
EcoRII CCWGG 5 cut(s) 224, 328, 736, 823, 936
EcoT14I CCWWGG 3 cut(s) 943, 1057, 1085
ErhI CCWWGG 3 cut(s) 943, 1057, 1085
FaeI CATG 7 cut(s) 719, 768, 808, 858, 906, 947, 1089
FatI CATG 7 cut(s) 715, 764, 804, 854, 902, 943, 1085
FauI CCCGC 2 cut(s) 546, 749
FauNDI CATATG 1 cut(s) 921
Fnu4HI GCNGC 2 cut(s) 462, 861
FokI GGATG 4 cut(s) 545, 600, 668, 1025
Fsp4HI GCNGC 2 cut(s) 462, 861
FspAI RTGCGCAY 1 cut(s) 254
FspI TGCGCA 2 cut(s) 254, 1017
GlaI GCGC 5 cut(s) 254, 984, 1017, 1083, 1150
GluI GCNGC 2 cut(s) 462, 861
GsaI CCCAGC 1 cut(s) 952
HaeII RGCGCY 3 cut(s) 986, 1085, 1152
HaeIII GGCC 1 cut(s) 378
HhaI GCGC 5 cut(s) 255, 985, 1018, 1084, 1151
Hin1II CATG 7 cut(s) 719, 768, 808, 858, 906, 947, 1089
Hin6I GCGC 5 cut(s) 253, 983, 1016, 1082, 1149
HinP1I GCGC 5 cut(s) 253, 983, 1016, 1082, 1149
HincII GTYRAC 1 cut(s) 126
HindII GTYRAC 1 cut(s) 126
HinfI GANTC 5 cut(s) 90, 136, 347, 925, 1005
HpaI GTTAAC 1 cut(s) 126
HphI GGTGA 3 cut(s) 73, 481, 800
Hpy166II GTNNAC 2 cut(s) 126, 802
Hpy188I TCNGA 7 cut(s) 23, 89, 346, 352, 444, 481, 930
Hpy188III TCNNGA 5 cut(s) 275, 617, 709, 956, 1051
Hpy8I GTNNAC 2 cut(s) 126, 802
HpyAV CCTTC 5 cut(s) 153, 168, 232, 1053, 1085
HpyCH4III ACNGT 2 cut(s) 216, 430
HpyCH4IV ACGT 1 cut(s) 564
HpyCH4V TGCA 9 cut(s) 341, 461, 613, 686, 808, 834, 860, 989, 1110
HpyF10VI GCNNNNNNNGC 4 cut(s) 610, 766, 1142, 1157
HpyF3I CTNAG 4 cut(s) 129, 273, 441, 968
HpySE526I ACGT 1 cut(s) 564
Hsp92II CATG 7 cut(s) 719, 768, 808, 858, 906, 947, 1089
HspAI GCGC 5 cut(s) 253, 983, 1016, 1082, 1149
KspAI GTTAAC 1 cut(s) 126
Kzo9I GATC 5 cut(s) 66, 166, 661, 838, 1183
LguI GCTCTTC 1 cut(s) 1072
LmnI GCTCC 1 cut(s) 673
Lsp1109I GCAGC 2 cut(s) 473, 872
LweI GCATC 5 cut(s) 27, 350, 448, 622, 1003
MabI ACCWGGT 2 cut(s) 823, 936
MaeII ACGT 1 cut(s) 564
MaeIII GTNAC 2 cut(s) 61, 418
MalI GATC 5 cut(s) 68, 168, 663, 840, 1185
MboI GATC 5 cut(s) 66, 166, 661, 838, 1183
MboII GAAGA 5 cut(s) 131, 222, 353, 1089, 1125
MflI RGATCY 1 cut(s) 661
MhlI GDGCHC 1 cut(s) 678
MluCI AATT 5 cut(s) 25, 484, 536, 873, 1179
MlyI GAGTC 1 cut(s) 1014
MmeI TCCRAC 2 cut(s) 137, 320
MseI TTAA 3 cut(s) 125, 468, 681
MslI CAYNNNNRTG 2 cut(s) 510, 681
MspA1I CMGCKG 1 cut(s) 464
MspR9I CCNGG 5 cut(s) 226, 330, 738, 825, 938
Mva1269I GAATGC 1 cut(s) 226
MvaI CCWGG 5 cut(s) 226, 330, 738, 825, 938
MwoI GCNNNNNNNGC 4 cut(s) 610, 766, 1142, 1157
NcoI CCATGG 2 cut(s) 943, 1085
NdeI CATATG 1 cut(s) 921
NdeII GATC 5 cut(s) 66, 166, 661, 838, 1183
NlaIII CATG 7 cut(s) 719, 768, 808, 858, 906, 947, 1089
NlaIV GGNNCC 5 cut(s) 294, 377, 630, 882, 1055
NmeAIII GCCGAG 1 cut(s) 1177
NmuCI GTSAC 1 cut(s) 61
NsbI TGCGCA 2 cut(s) 254, 1017
NspI RCATGY 1 cut(s) 808
PaeR7I CTCGAG 1 cut(s) 306
PciSI GCTCTTC 1 cut(s) 1072
PctI GAATGC 1 cut(s) 226
PfeI GAWTC 4 cut(s) 90, 136, 347, 925
PflFI GACNNNGTC 1 cut(s) 938
PkrI GCNGC 2 cut(s) 463, 862
PleI GAGTC 1 cut(s) 1013
PmaCI CACGTG 1 cut(s) 565
PmlI CACGTG 1 cut(s) 565
PpsI GAGTC 1 cut(s) 1013
Ppu21I YACGTR 1 cut(s) 565
Psp6I CCWGG 5 cut(s) 224, 328, 736, 823, 936
PspCI CACGTG 1 cut(s) 565
PspFI CCCAGC 1 cut(s) 948
PspGI CCWGG 5 cut(s) 224, 328, 736, 823, 936
PspN4I GGNNCC 5 cut(s) 294, 377, 630, 882, 1055
PspPI GGNCC 2 cut(s) 376, 940
PspXI VCTCGAGB 1 cut(s) 306
PsuI RGATCY 1 cut(s) 661
PsyI GACNNNGTC 1 cut(s) 938
PvuII CAGCTG 1 cut(s) 464
RsaI GTAC 2 cut(s) 176, 191
RsaNI GTAC 2 cut(s) 175, 190
RseI CAYNNNNRTG 2 cut(s) 510, 681
SapI GCTCTTC 1 cut(s) 1072
SaqAI TTAA 3 cut(s) 125, 468, 681
SatI GCNGC 2 cut(s) 462, 861
Sau3AI GATC 5 cut(s) 66, 166, 661, 838, 1183
Sau96I GGNCC 2 cut(s) 376, 940
ScaI AGTACT 1 cut(s) 191
SchI GAGTC 1 cut(s) 1014
ScrFI CCNGG 5 cut(s) 226, 330, 738, 825, 938
SduI GDGCHC 1 cut(s) 678
SexAI ACCWGGT 2 cut(s) 823, 936
SfaNI GCATC 5 cut(s) 27, 350, 448, 622, 1003
SfcI CTRYAG 1 cut(s) 429
Sfr274I CTCGAG 1 cut(s) 306
SinI GGWCC 1 cut(s) 940
SlaI CTCGAG 1 cut(s) 306
SmiMI CAYNNNNRTG 2 cut(s) 510, 681
SmlI CTYRAG 1 cut(s) 306
SmoI CTYRAG 1 cut(s) 306
Sse9I AATT 5 cut(s) 25, 484, 536, 873, 1179
SsiI CCGC 7 cut(s) 326, 553, 604, 756, 781, 842, 1067
StyD4I CCNGG 5 cut(s) 224, 328, 736, 823, 936
StyI CCWWGG 3 cut(s) 943, 1057, 1085
TaaI ACNGT 2 cut(s) 216, 430
TaiI ACGT 1 cut(s) 567
TaqI TCGA 3 cut(s) 161, 307, 548
TasI AATT 5 cut(s) 25, 484, 536, 873, 1179
TatI WGTACW 1 cut(s) 189
TfiI GAWTC 4 cut(s) 90, 136, 347, 925
Tru1I TTAA 3 cut(s) 125, 468, 681
Tru9I TTAA 3 cut(s) 125, 468, 681
TscAI CASTG 4 cut(s) 219, 262, 391, 1025
TseFI GTSAC 1 cut(s) 61
TseI GCWGC 2 cut(s) 461, 860
Tsp45I GTSAC 1 cut(s) 61
TspDTI ATGAA 2 cut(s) 149, 549
TspRI CASTG 4 cut(s) 219, 262, 391, 1025
Tth111I GACNNNGTC 1 cut(s) 938
VpaK11BI GGWCC 1 cut(s) 940
XapI RAATTY 3 cut(s) 25, 484, 536
XceI RCATGY 1 cut(s) 808
XhoI CTCGAG 1 cut(s) 306
ZrmI AGTACT 1 cut(s) 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.