Rh2CG311800

Protein of unknown function (DUF707)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0001946
Physical Location & Seq
Forward (+)
39400449 .. 39403563
3115 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG311800.1

Sequence Viewer

Length: 1152 bp
ATGGGCAGTCCCACATGCGTTGGGAATGTAAGAAAACCCGAAGACAAAATGAGGTTTGTTGCGACAGCTTTTGTGGCGATTCTGTTTGGCTTCTTTCTAGGAGTGTCATTTCCAACCATTTCGTTAACTAAGATGAATTTCCCACCCAGCCATTTTTCTTCCATTGATCTTTCATACATAGAGGAGAAGTACTCGGGGTTCTCAACCCAAGCACTGGTGAATGCCTGGTCTTCTTTGAAGAGCAACAGAGATATCTCTGTAAAATACATCCCTAATGATGCAAAGGCAGATTTGGGTTCCAAACAAAGCCTCCTTGGCATCGTAGAATCTGAGTCAGATTTATATCTTCATCAATTATGGGGTCTGCCCAGTGAGGACTTAACCATCAAGCCAAAATATCTTGTAACCTTTACTGTAGGCCATGCTCAGAAAAAAAATATAGATGCCGCAGTTAAAAAGACAAGTGAATGGGATCAGTTTGAGAGGTCAAAGCAGGCTATCCATGTGAGCATTCAGAAGCAAACTAAATGGTGGTGTGCCAAGCGTTTTTTGCATCCTGACATTGTGGCATCCTATGAATACATATTAATTTGGGATGAGGATCTCGGTGTGGAGCACTTTAATGCAGAGGAATACATAAAACTAGTAAGGAAATATGGGTTGGAAGTATCACAGTCTGGTTTAGAACCAAATAATGGGCTAACATGGCAGATGACAAAGGAGAGGCAGACAGAGGAGAAACCTGGTTGGTGTAATGATTTGCATTTGCCGCCCTGTGCAGCGTTTGTAGAAATTATGGCGCCTGTGTTTTCTCGGGATGCATGGTGTTGTGTTTGGCATATGATTCAGAATGACCTGGTCCATGGTTGGGGTCTGGATTTTGCTCTTAGACGCTGTGTAGAGCCTGCACATGAGAAAATAGGAGTCGTAGATGCACAGTGGATTGTCCATCAAGGTGTTCCTTCACTTCTAAACCAGGCCCAAGCAGAGCACTTAGAGCGCCATGGGAAGGGGTATGTAACGATCCCTCTGTCCTTACTCCTTCCTGTGTCTATGTGCCGATATGCATATGCAGAAACAGGAACTCCTCATAATCAATATTTACATAGCCTTTGCATTTCTAGTGAATTTACATTATCTCTCCAGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF707

Protein Analysis

383

Amino Acids

43.5

Weight (kDa)

6.2

Isoelectric Point (pI)

37.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF707 PF05212 99 - 333 3.9e-95 Protein of unknown function (DUF707)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 799
AccB7I CCANNNNNTGG 2 cut(s) 214, 695
AciI CCGC 2 cut(s) 447, 770
AclWI GGATC 3 cut(s) 480, 609, 1018
AcsI RAATTY 2 cut(s) 136, 1127
AcyI GRCGYC 1 cut(s) 800
AfaI GTAC 1 cut(s) 191
AfiI CCNNNNNNNGG 4 cut(s) 214, 695, 868, 1009
AgsI TTSAA 1 cut(s) 238
AhlI ACTAGT 1 cut(s) 643
AjnI CCWGG 4 cut(s) 224, 742, 855, 975
AjuI GAANNNNNNNTTGG 2 cut(s) 644, 676
AluBI AGCT 1 cut(s) 68
AluI AGCT 1 cut(s) 68
Alw21I GWGCWC 2 cut(s) 618, 993
AlwI GGATC 3 cut(s) 480, 609, 1018
Ama87I CYCGRG 2 cut(s) 193, 813
AoxI GGCC 2 cut(s) 418, 978
ApeKI GCWGC 1 cut(s) 779
ApoI RAATTY 2 cut(s) 136, 1127
AseI ATTAAT 1 cut(s) 587
AspLEI GCGC 2 cut(s) 802, 1002
AspS9I GGNCC 2 cut(s) 859, 979
AsuHPI GGTGA 1 cut(s) 229
AvaI CYCGRG 2 cut(s) 193, 813
AvaII GGWCC 1 cut(s) 859
BanI GGYRCC 1 cut(s) 799
BbsI GAAGAC 2 cut(s) 48, 222
Bbv12I GWGCWC 2 cut(s) 618, 993
BbvI GCAGC 1 cut(s) 791
BccI CCATC 2 cut(s) 392, 957
BciT130I CCWGG 4 cut(s) 226, 744, 857, 977
BcuI ACTAGT 1 cut(s) 643
BfaI CTAG 3 cut(s) 98, 644, 1122
BfmI CTRYAG 1 cut(s) 414
BfoI RGCGCY 2 cut(s) 803, 1003
BglI GCCNNNNNGGC 1 cut(s) 315
BisI GCNGC 3 cut(s) 447, 770, 780
BlsI GCNGC 3 cut(s) 448, 771, 781
BmcAI AGTACT 1 cut(s) 191
Bme1390I CCNGG 4 cut(s) 226, 744, 857, 977
Bme18I GGWCC 1 cut(s) 859
BmeT110I CYCGRG 2 cut(s) 193, 813
BmgT120I GGNCC 2 cut(s) 859, 979
BmiI GGNNCC 2 cut(s) 298, 801
BmrFI CCNGG 4 cut(s) 226, 744, 857, 977
BmrI ACTGGG 1 cut(s) 363
BmsI GCATC 7 cut(s) 268, 327, 433, 562, 578, 808, 922
BmuI ACTGGG 1 cut(s) 363
BpiI GAAGAC 2 cut(s) 48, 222
BplI GAGNNNNNCTC 2 cut(s) 176, 208
BpmI CTGGAG 1 cut(s) 1127
BsaBI GATNNNNATC 2 cut(s) 342, 600
BsaHI GRCGYC 1 cut(s) 800
BsaJI CCNNGG 3 cut(s) 313, 862, 1003
BsaXI ACNNNNNCTCC 4 cut(s) 294, 324, 1069, 1099
Bsc4I CCNNNNNNNGG 4 cut(s) 214, 695, 868, 1009
Bse1I ACTGG 2 cut(s) 219, 369
Bse8I GATNNNNATC 2 cut(s) 342, 600
BseBI CCWGG 4 cut(s) 226, 744, 857, 977
BseDI CCNNGG 3 cut(s) 313, 862, 1003
BseGI GGATG 5 cut(s) 267, 553, 569, 601, 823
BseJI GATNNNNATC 2 cut(s) 342, 600
BseLI CCNNNNNNNGG 4 cut(s) 214, 695, 868, 1009
BseMII CTCAG 2 cut(s) 321, 440
BseNI ACTGG 2 cut(s) 219, 369
BseRI GAGGAG 3 cut(s) 197, 749, 1077
BseXI GCAGC 1 cut(s) 791
BseYI CCCAGC 1 cut(s) 146
BsgI GTGCAG 2 cut(s) 798, 891
BshFI GGCC 2 cut(s) 420, 980
BshNI GGYRCC 1 cut(s) 799
BsiHKAI GWGCWC 2 cut(s) 618, 993
BsiHKCI CYCGRG 2 cut(s) 193, 813
BslI CCNNNNNNNGG 4 cut(s) 214, 695, 868, 1009
BsmI GAATGC 2 cut(s) 226, 510
BsnI GGCC 2 cut(s) 420, 980
BsoBI CYCGRG 2 cut(s) 193, 813
Bsp1286I GDGCHC 2 cut(s) 618, 993
Bsp143I GATC 4 cut(s) 166, 472, 601, 1023
Bsp19I CCATGG 2 cut(s) 862, 1003
BspACI CCGC 2 cut(s) 447, 770
BspANI GGCC 2 cut(s) 420, 980
BspCNI CTCAG 2 cut(s) 322, 439
BspLI GGNNCC 2 cut(s) 298, 801
BspPI GGATC 3 cut(s) 480, 609, 1018
BspQI GCTCTTC 1 cut(s) 233
BspT107I GGYRCC 1 cut(s) 799
BsrI ACTGG 2 cut(s) 219, 369
BssECI CCNNGG 3 cut(s) 313, 862, 1003
BssMI GATC 4 cut(s) 166, 472, 601, 1023
BssNI GRCGYC 1 cut(s) 800
BssT1I CCWWGG 3 cut(s) 313, 862, 1003
Bst2UI CCWGG 4 cut(s) 226, 744, 857, 977
Bst4CI ACNGT 3 cut(s) 415, 675, 939
Bst6I CTCTTC 1 cut(s) 233
BstACI GRCGYC 1 cut(s) 800
BstC8I GCNNGC 2 cut(s) 495, 906
BstDEI CTNAG 5 cut(s) 129, 330, 426, 887, 994
BstDSI CCRYGG 2 cut(s) 862, 1003
BstF5I GGATG 5 cut(s) 267, 553, 569, 601, 823
BstH2I RGCGCY 2 cut(s) 803, 1003
BstHHI GCGC 2 cut(s) 802, 1002
BstKTI GATC 4 cut(s) 169, 475, 604, 1026
BstMBI GATC 4 cut(s) 166, 472, 601, 1023
BstMWI GCNNNNNNNGC 6 cut(s) 74, 315, 550, 706, 769, 997
BstNI CCWGG 4 cut(s) 226, 744, 857, 977
BstNSI RCATGY 1 cut(s) 18
BstSCI CCNGG 4 cut(s) 224, 742, 855, 975
BstSFI CTRYAG 1 cut(s) 414
BstV1I GCAGC 1 cut(s) 791
BstV2I GAAGAC 2 cut(s) 48, 222
BstX2I RGATCY 1 cut(s) 601
BstYI RGATCY 1 cut(s) 601
BsuRI GGCC 2 cut(s) 420, 980
BtgI CCRYGG 2 cut(s) 862, 1003
BtsCI GGATG 5 cut(s) 267, 553, 569, 601, 823
BtsIMutI CAGTG 3 cut(s) 212, 376, 944
Cac8I GCNNGC 2 cut(s) 495, 906
CfoI GCGC 2 cut(s) 802, 1002
Cfr13I GGNCC 2 cut(s) 859, 979
CseI GACGC 1 cut(s) 900
CsiI ACCWGGT 2 cut(s) 742, 855
Csp6I GTAC 1 cut(s) 190
CspCI CAANNNNNGTGG 1 cut(s) 36
CviAII CATG 8 cut(s) 15, 422, 503, 705, 822, 863, 911, 1004
CviQI GTAC 1 cut(s) 190
DdeI CTNAG 5 cut(s) 129, 330, 426, 887, 994
DinI GGCGCC 1 cut(s) 801
DpnI GATC 4 cut(s) 168, 474, 603, 1025
DpnII GATC 4 cut(s) 166, 472, 601, 1023
Eam1104I CTCTTC 1 cut(s) 233
EarI CTCTTC 1 cut(s) 233
Eco130I CCWWGG 3 cut(s) 313, 862, 1003
Eco32I GATATC 1 cut(s) 253
Eco47I GGWCC 1 cut(s) 859
Eco88I CYCGRG 2 cut(s) 193, 813
EcoRII CCWGG 4 cut(s) 224, 742, 855, 975
EcoRV GATATC 1 cut(s) 253
EcoT14I CCWWGG 3 cut(s) 313, 862, 1003
EcoT22I ATGCAT 2 cut(s) 823, 1069
EgeI GGCGCC 1 cut(s) 801
EheI GGCGCC 1 cut(s) 801
ErhI CCWWGG 3 cut(s) 313, 862, 1003
FaeI CATG 8 cut(s) 18, 425, 506, 708, 825, 866, 914, 1007
FatI CATG 8 cut(s) 14, 421, 502, 704, 821, 862, 910, 1003
FauNDI CATATG 2 cut(s) 840, 1069
Fnu4HI GCNGC 3 cut(s) 447, 770, 780
FokI GGATG 5 cut(s) 254, 540, 556, 608, 830
Fsp4HI GCNGC 3 cut(s) 447, 770, 780
FspBI CTAG 3 cut(s) 98, 644, 1122
GlaI GCGC 2 cut(s) 801, 1001
GluI GCNGC 3 cut(s) 447, 770, 780
GsaI CCCAGC 1 cut(s) 150
GsuI CTGGAG 1 cut(s) 1127
HaeII RGCGCY 2 cut(s) 803, 1003
HaeIII GGCC 2 cut(s) 420, 980
HgaI GACGC 1 cut(s) 900
HhaI GCGC 2 cut(s) 802, 1002
Hin1I GRCGYC 1 cut(s) 800
Hin1II CATG 8 cut(s) 18, 425, 506, 708, 825, 866, 914, 1007
Hin6I GCGC 2 cut(s) 800, 1000
HinP1I GCGC 2 cut(s) 800, 1000
HincII GTYRAC 1 cut(s) 126
HindII GTYRAC 1 cut(s) 126
HinfI GANTC 5 cut(s) 79, 326, 332, 844, 924
HpaI GTTAAC 1 cut(s) 126
HphI GGTGA 1 cut(s) 229
Hpy166II GTNNAC 1 cut(s) 126
Hpy188I TCNGA 5 cut(s) 331, 337, 429, 516, 849
Hpy188III TCNNGA 4 cut(s) 557, 815, 875, 1144
Hpy8I GTNNAC 1 cut(s) 126
HpyAV CCTTC 3 cut(s) 972, 1003, 1052
HpyCH4III ACNGT 3 cut(s) 415, 675, 939
HpyF10VI GCNNNNNNNGC 6 cut(s) 74, 315, 550, 706, 769, 997
HpyF3I CTNAG 5 cut(s) 129, 330, 426, 887, 994
Hsp92I GRCGYC 1 cut(s) 800
Hsp92II CATG 8 cut(s) 18, 425, 506, 708, 825, 866, 914, 1007
HspAI GCGC 2 cut(s) 800, 1000
KasI GGCGCC 1 cut(s) 799
KspAI GTTAAC 1 cut(s) 126
Kzo9I GATC 4 cut(s) 166, 472, 601, 1023
LguI GCTCTTC 1 cut(s) 233
LmnI GCTCC 1 cut(s) 613
Lsp1109I GCAGC 1 cut(s) 791
LweI GCATC 7 cut(s) 268, 327, 433, 562, 578, 808, 922
MabI ACCWGGT 2 cut(s) 742, 855
MaeI CTAG 3 cut(s) 98, 644, 1122
MaeIII GTNAC 2 cut(s) 403, 1018
MalI GATC 4 cut(s) 168, 474, 603, 1025
MboI GATC 4 cut(s) 166, 472, 601, 1023
MboII GAAGA 5 cut(s) 53, 150, 222, 250, 338
MflI RGATCY 1 cut(s) 601
MhlI GDGCHC 2 cut(s) 618, 993
MluCI AATT 5 cut(s) 136, 353, 588, 792, 1127
Mly113I GGCGCC 1 cut(s) 800
MlyI GAGTC 2 cut(s) 341, 933
MmeI TCCRAC 2 cut(s) 137, 642
Mph1103I ATGCAT 2 cut(s) 823, 1069
MseI TTAA 5 cut(s) 125, 380, 453, 587, 621
MslI CAYNNNNRTG 2 cut(s) 621, 954
MspR9I CCNGG 4 cut(s) 226, 744, 857, 977
Mva1269I GAATGC 2 cut(s) 226, 510
MvaI CCWGG 4 cut(s) 226, 744, 857, 977
MwoI GCNNNNNNNGC 6 cut(s) 74, 315, 550, 706, 769, 997
NarI GGCGCC 1 cut(s) 800
NcoI CCATGG 2 cut(s) 862, 1003
NdeI CATATG 2 cut(s) 840, 1069
NdeII GATC 4 cut(s) 166, 472, 601, 1023
NlaIII CATG 8 cut(s) 18, 425, 506, 708, 825, 866, 914, 1007
NlaIV GGNNCC 2 cut(s) 298, 801
NsiI ATGCAT 2 cut(s) 823, 1069
NspI RCATGY 1 cut(s) 18
PciSI GCTCTTC 1 cut(s) 233
PctI GAATGC 2 cut(s) 226, 510
PfeI GAWTC 3 cut(s) 79, 326, 844
PflFI GACNNNGTC 1 cut(s) 857
PflMI CCANNNNNTGG 2 cut(s) 214, 695
PkrI GCNGC 3 cut(s) 448, 771, 781
PleI GAGTC 2 cut(s) 340, 932
PluTI GGCGCC 1 cut(s) 803
PpsI GAGTC 2 cut(s) 340, 932
PshBI ATTAAT 1 cut(s) 587
Psp6I CCWGG 4 cut(s) 224, 742, 855, 975
PspFI CCCAGC 1 cut(s) 146
PspGI CCWGG 4 cut(s) 224, 742, 855, 975
PspN4I GGNNCC 2 cut(s) 298, 801
PspPI GGNCC 2 cut(s) 859, 979
PsrI GAACNNNNNNTAC 2 cut(s) 182, 214
PsuI RGATCY 1 cut(s) 601
PsyI GACNNNGTC 1 cut(s) 857
RsaI GTAC 1 cut(s) 191
RsaNI GTAC 1 cut(s) 190
RseI CAYNNNNRTG 2 cut(s) 621, 954
SapI GCTCTTC 1 cut(s) 233
SaqAI TTAA 5 cut(s) 125, 380, 453, 587, 621
SatI GCNGC 3 cut(s) 447, 770, 780
Sau3AI GATC 4 cut(s) 166, 472, 601, 1023
Sau96I GGNCC 2 cut(s) 859, 979
ScaI AGTACT 1 cut(s) 191
SchI GAGTC 2 cut(s) 341, 933
ScrFI CCNGG 4 cut(s) 226, 744, 857, 977
SduI GDGCHC 2 cut(s) 618, 993
SetI ASST 7 cut(s) 56, 70, 410, 488, 745, 858, 958
SexAI ACCWGGT 2 cut(s) 742, 855
SfaNI GCATC 7 cut(s) 268, 327, 433, 562, 578, 808, 922
SfcI CTRYAG 1 cut(s) 414
SfoI GGCGCC 1 cut(s) 801
SinI GGWCC 1 cut(s) 859
SmiMI CAYNNNNRTG 2 cut(s) 621, 954
SpeI ACTAGT 1 cut(s) 643
Sse9I AATT 5 cut(s) 136, 353, 588, 792, 1127
SsiI CCGC 2 cut(s) 447, 770
SspDI GGCGCC 1 cut(s) 799
SspI AATATT 1 cut(s) 1100
SspMI CTAG 3 cut(s) 98, 644, 1122
StyD4I CCNGG 4 cut(s) 224, 742, 855, 975
StyI CCWWGG 3 cut(s) 313, 862, 1003
TaaI ACNGT 3 cut(s) 415, 675, 939
TasI AATT 5 cut(s) 136, 353, 588, 792, 1127
TatI WGTACW 1 cut(s) 189
TauI GCSGC 2 cut(s) 449, 772
TfiI GAWTC 3 cut(s) 79, 326, 844
Tru1I TTAA 5 cut(s) 125, 380, 453, 587, 621
Tru9I TTAA 5 cut(s) 125, 380, 453, 587, 621
TscAI CASTG 3 cut(s) 219, 376, 944
TseI GCWGC 1 cut(s) 779
TspDTI ATGAA 4 cut(s) 149, 162, 338, 591
TspRI CASTG 3 cut(s) 219, 376, 944
Tth111I GACNNNGTC 1 cut(s) 857
Van91I CCANNNNNTGG 2 cut(s) 214, 695
VpaK11BI GGWCC 1 cut(s) 859
VspI ATTAAT 1 cut(s) 587
XapI RAATTY 2 cut(s) 136, 1127
XceI RCATGY 1 cut(s) 18
XspI CTAG 3 cut(s) 98, 644, 1122
ZrmI AGTACT 1 cut(s) 191
Zsp2I ATGCAT 2 cut(s) 823, 1069
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.