Rh2DG351800

Protein of unknown function (DUF707)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
49247065 .. 49248747
1683 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG351800.1

Sequence Viewer

Length: 801 bp
ATGGGTAGATTTGTTACAGATCTGTTCTCTAATCTGAACCTTTTCTTGTGGAGGTGGCACTTGCAGGACTTAACCATCAAGCCAAAATATCTTGTAACCTTTACTGTAGGCCATGCTCAGAAAAAAAATATAGATGCCGCAGTTAAAAAGACAAGTGAATGGGATCAGTTTGAGAGGTCAAAGCAGGCTATCCATGTGAGCATTCAGAAGCAAACTAAATGGTGGTGTGCCAAGCGTTTTTTGCATCCTGACATTGTGGCATCCTATGAATACATATTAATTTGGGATGAGGATCTCGGTGTGGAGCACTTTAATGCAGAGGAATACATAAAACTAGTAAGGAAATATGGGAGAGGTCATAGTGAAGTTCACATGCAGACAGAGGAGAAACCTGGTTGGTGTAATGATTTGCATTTGCCGCCCTGTGCAGCGTTTGTAGAAATTATGGCGCCTGTGTTTTCTCGGGATGCATGGTGTTGTGTTTGGCATATGATTCAGAATGACCTGGTCCATGGTTGGGGTCTGGATTTTGCTCTTAGACGCTGTGTAGAGCCTGCACATGAGAAAATAGGAGTCGTAGATGCACAGTGGATTGTCCATCAAGGTGTTCCTTCACTTCTAAACCAGGCCCAAGCAGAGCACTTAGAGCGCCATGGGAAGGGGTATGTAACGATCCCTCTGTCCTTACTCCTTCCTGTGTCTATGTGCCGATATGCATATGCAGAAACAGGAACTCCTCATAATCAATATTTACATAGCCTTTGCATTTCTAGTGAATTTACATTATCTCTCCAGATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

266

Amino Acids

30.91

Weight (kDa)

6.59

Isoelectric Point (pI)

35.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF707 PF05212 15 - 117 9.4e-36 Protein of unknown function (DUF707)
DUF707 PF05212 119 - 216 3.6e-43 Protein of unknown function (DUF707)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 448
AciI CCGC 2 cut(s) 138, 419
AclWI GGATC 3 cut(s) 171, 300, 667
AcsI RAATTY 1 cut(s) 776
AcyI GRCGYC 1 cut(s) 449
AfiI CCNNNNNNNGG 2 cut(s) 517, 658
AhlI ACTAGT 1 cut(s) 334
AjnI CCWGG 3 cut(s) 391, 504, 624
Alw21I GWGCWC 2 cut(s) 309, 642
AlwI GGATC 3 cut(s) 171, 300, 667
Ama87I CYCGRG 1 cut(s) 462
AoxI GGCC 2 cut(s) 109, 627
ApeKI GCWGC 1 cut(s) 428
ApoI RAATTY 1 cut(s) 776
AseI ATTAAT 1 cut(s) 278
Asp700I GAANNNNTTC 1 cut(s) 41
AspLEI GCGC 2 cut(s) 451, 651
AspS9I GGNCC 2 cut(s) 508, 628
AvaI CYCGRG 1 cut(s) 462
AvaII GGWCC 1 cut(s) 508
BanI GGYRCC 1 cut(s) 448
Bbv12I GWGCWC 2 cut(s) 309, 642
BbvI GCAGC 1 cut(s) 440
BccI CCATC 2 cut(s) 83, 606
BciT130I CCWGG 3 cut(s) 393, 506, 626
BcuI ACTAGT 1 cut(s) 334
BfaI CTAG 2 cut(s) 335, 771
BfmI CTRYAG 1 cut(s) 105
BfoI RGCGCY 2 cut(s) 452, 652
BglII AGATCT 1 cut(s) 19
BisI GCNGC 3 cut(s) 138, 419, 429
BlsI GCNGC 3 cut(s) 139, 420, 430
Bme1390I CCNGG 3 cut(s) 393, 506, 626
Bme18I GGWCC 1 cut(s) 508
BmeT110I CYCGRG 1 cut(s) 462
BmgT120I GGNCC 2 cut(s) 508, 628
BmiI GGNNCC 1 cut(s) 450
BmrFI CCNGG 3 cut(s) 393, 506, 626
BmsI GCATC 5 cut(s) 124, 253, 269, 457, 571
BpmI CTGGAG 1 cut(s) 776
BsaBI GATNNNNATC 1 cut(s) 291
BsaHI GRCGYC 1 cut(s) 449
BsaJI CCNNGG 2 cut(s) 511, 652
BsaXI ACNNNNNCTCC 2 cut(s) 718, 748
Bsc4I CCNNNNNNNGG 2 cut(s) 517, 658
Bse8I GATNNNNATC 1 cut(s) 291
BseBI CCWGG 3 cut(s) 393, 506, 626
BseDI CCNNGG 2 cut(s) 511, 652
BseGI GGATG 4 cut(s) 244, 260, 292, 472
BseJI GATNNNNATC 1 cut(s) 291
BseLI CCNNNNNNNGG 2 cut(s) 517, 658
BseMII CTCAG 1 cut(s) 131
BseRI GAGGAG 2 cut(s) 398, 726
BseXI GCAGC 1 cut(s) 440
BsgI GTGCAG 2 cut(s) 447, 540
BshFI GGCC 2 cut(s) 111, 629
BshNI GGYRCC 1 cut(s) 448
BsiHKAI GWGCWC 2 cut(s) 309, 642
BsiHKCI CYCGRG 1 cut(s) 462
BslI CCNNNNNNNGG 2 cut(s) 517, 658
BsmI GAATGC 1 cut(s) 201
BsnI GGCC 2 cut(s) 111, 629
BsoBI CYCGRG 1 cut(s) 462
Bsp1286I GDGCHC 2 cut(s) 309, 642
Bsp143I GATC 4 cut(s) 19, 163, 292, 672
Bsp19I CCATGG 2 cut(s) 511, 652
BspACI CCGC 2 cut(s) 138, 419
BspANI GGCC 2 cut(s) 111, 629
BspCNI CTCAG 1 cut(s) 130
BspLI GGNNCC 1 cut(s) 450
BspPI GGATC 3 cut(s) 171, 300, 667
BspT107I GGYRCC 1 cut(s) 448
BssECI CCNNGG 2 cut(s) 511, 652
BssMI GATC 4 cut(s) 19, 163, 292, 672
BssNI GRCGYC 1 cut(s) 449
BssT1I CCWWGG 2 cut(s) 511, 652
Bst2UI CCWGG 3 cut(s) 393, 506, 626
Bst4CI ACNGT 2 cut(s) 106, 588
BstACI GRCGYC 1 cut(s) 449
BstC8I GCNNGC 2 cut(s) 186, 555
BstDEI CTNAG 3 cut(s) 117, 536, 643
BstDSI CCRYGG 2 cut(s) 511, 652
BstF5I GGATG 4 cut(s) 244, 260, 292, 472
BstH2I RGCGCY 2 cut(s) 452, 652
BstHHI GCGC 2 cut(s) 451, 651
BstKTI GATC 4 cut(s) 22, 166, 295, 675
BstMBI GATC 4 cut(s) 19, 163, 292, 672
BstMWI GCNNNNNNNGC 3 cut(s) 241, 418, 646
BstNI CCWGG 3 cut(s) 393, 506, 626
BstNSI RCATGY 1 cut(s) 376
BstSCI CCNGG 3 cut(s) 391, 504, 624
BstSFI CTRYAG 1 cut(s) 105
BstV1I GCAGC 1 cut(s) 440
BstX2I RGATCY 2 cut(s) 19, 292
BstYI RGATCY 2 cut(s) 19, 292
BsuRI GGCC 2 cut(s) 111, 629
BtgI CCRYGG 2 cut(s) 511, 652
BtsCI GGATG 4 cut(s) 244, 260, 292, 472
BtsIMutI CAGTG 1 cut(s) 593
Cac8I GCNNGC 2 cut(s) 186, 555
CfoI GCGC 2 cut(s) 451, 651
Cfr13I GGNCC 2 cut(s) 508, 628
CseI GACGC 1 cut(s) 549
CsiI ACCWGGT 2 cut(s) 391, 504
CviAII CATG 7 cut(s) 113, 194, 373, 471, 512, 560, 653
CviJI RGCY 6 cut(s) 82, 111, 188, 553, 629, 759
CviKI_1 RGCY 6 cut(s) 82, 111, 188, 553, 629, 759
DdeI CTNAG 3 cut(s) 117, 536, 643
DinI GGCGCC 1 cut(s) 450
DpnI GATC 4 cut(s) 21, 165, 294, 674
DpnII GATC 4 cut(s) 19, 163, 292, 672
Eco130I CCWWGG 2 cut(s) 511, 652
Eco47I GGWCC 1 cut(s) 508
Eco88I CYCGRG 1 cut(s) 462
EcoRII CCWGG 3 cut(s) 391, 504, 624
EcoT14I CCWWGG 2 cut(s) 511, 652
EcoT22I ATGCAT 2 cut(s) 472, 718
EgeI GGCGCC 1 cut(s) 450
EheI GGCGCC 1 cut(s) 450
ErhI CCWWGG 2 cut(s) 511, 652
FaeI CATG 7 cut(s) 116, 197, 376, 474, 515, 563, 656
FatI CATG 7 cut(s) 112, 193, 372, 470, 511, 559, 652
FauNDI CATATG 2 cut(s) 489, 718
Fnu4HI GCNGC 3 cut(s) 138, 419, 429
FokI GGATG 4 cut(s) 231, 247, 299, 479
Fsp4HI GCNGC 3 cut(s) 138, 419, 429
FspBI CTAG 2 cut(s) 335, 771
GlaI GCGC 2 cut(s) 450, 650
GluI GCNGC 3 cut(s) 138, 419, 429
GsuI CTGGAG 1 cut(s) 776
HaeII RGCGCY 2 cut(s) 452, 652
HaeIII GGCC 2 cut(s) 111, 629
HgaI GACGC 1 cut(s) 549
HhaI GCGC 2 cut(s) 451, 651
Hin1I GRCGYC 1 cut(s) 449
Hin1II CATG 7 cut(s) 116, 197, 376, 474, 515, 563, 656
Hin6I GCGC 2 cut(s) 449, 649
HinP1I GCGC 2 cut(s) 449, 649
HinfI GANTC 2 cut(s) 493, 573
Hpy166II GTNNAC 1 cut(s) 370
Hpy188I TCNGA 4 cut(s) 36, 120, 207, 498
Hpy188III TCNNGA 4 cut(s) 248, 464, 524, 793
Hpy8I GTNNAC 1 cut(s) 370
HpyAV CCTTC 3 cut(s) 621, 652, 701
HpyCH4III ACNGT 2 cut(s) 106, 588
HpyF10VI GCNNNNNNNGC 3 cut(s) 241, 418, 646
HpyF3I CTNAG 3 cut(s) 117, 536, 643
Hsp92I GRCGYC 1 cut(s) 449
Hsp92II CATG 7 cut(s) 116, 197, 376, 474, 515, 563, 656
HspAI GCGC 2 cut(s) 449, 649
KasI GGCGCC 1 cut(s) 448
Kzo9I GATC 4 cut(s) 19, 163, 292, 672
LmnI GCTCC 1 cut(s) 304
Lsp1109I GCAGC 1 cut(s) 440
LweI GCATC 5 cut(s) 124, 253, 269, 457, 571
MabI ACCWGGT 2 cut(s) 391, 504
MaeI CTAG 2 cut(s) 335, 771
MaeIII GTNAC 3 cut(s) 13, 94, 667
MalI GATC 4 cut(s) 21, 165, 294, 674
MboI GATC 4 cut(s) 19, 163, 292, 672
MflI RGATCY 2 cut(s) 19, 292
MhlI GDGCHC 2 cut(s) 309, 642
MluCI AATT 3 cut(s) 279, 441, 776
Mly113I GGCGCC 1 cut(s) 449
MlyI GAGTC 1 cut(s) 582
MnlI CCTC 8 cut(s) 45, 168, 283, 313, 347, 376, 687, 747
Mph1103I ATGCAT 2 cut(s) 472, 718
MroXI GAANNNNTTC 1 cut(s) 41
MseI TTAA 4 cut(s) 71, 144, 278, 312
MslI CAYNNNNRTG 2 cut(s) 312, 603
MspR9I CCNGG 3 cut(s) 393, 506, 626
Mva1269I GAATGC 1 cut(s) 201
MvaI CCWGG 3 cut(s) 393, 506, 626
MwoI GCNNNNNNNGC 3 cut(s) 241, 418, 646
NarI GGCGCC 1 cut(s) 449
NcoI CCATGG 2 cut(s) 511, 652
NdeI CATATG 2 cut(s) 489, 718
NdeII GATC 4 cut(s) 19, 163, 292, 672
NlaIII CATG 7 cut(s) 116, 197, 376, 474, 515, 563, 656
NlaIV GGNNCC 1 cut(s) 450
NsiI ATGCAT 2 cut(s) 472, 718
NspI RCATGY 1 cut(s) 376
PctI GAATGC 1 cut(s) 201
PdmI GAANNNNTTC 1 cut(s) 41
PfeI GAWTC 1 cut(s) 493
PflFI GACNNNGTC 1 cut(s) 506
PkrI GCNGC 3 cut(s) 139, 420, 430
PleI GAGTC 1 cut(s) 581
PluTI GGCGCC 1 cut(s) 452
PpsI GAGTC 1 cut(s) 581
PshBI ATTAAT 1 cut(s) 278
Psp6I CCWGG 3 cut(s) 391, 504, 624
PspGI CCWGG 3 cut(s) 391, 504, 624
PspN4I GGNNCC 1 cut(s) 450
PspPI GGNCC 2 cut(s) 508, 628
PsuI RGATCY 2 cut(s) 19, 292
PsyI GACNNNGTC 1 cut(s) 506
RseI CAYNNNNRTG 2 cut(s) 312, 603
SaqAI TTAA 4 cut(s) 71, 144, 278, 312
SatI GCNGC 3 cut(s) 138, 419, 429
Sau3AI GATC 4 cut(s) 19, 163, 292, 672
Sau96I GGNCC 2 cut(s) 508, 628
SchI GAGTC 1 cut(s) 582
ScrFI CCNGG 3 cut(s) 393, 506, 626
SduI GDGCHC 2 cut(s) 309, 642
SetI ASST 8 cut(s) 42, 56, 101, 179, 358, 394, 507, 607
SexAI ACCWGGT 2 cut(s) 391, 504
SfaNI GCATC 5 cut(s) 124, 253, 269, 457, 571
SfcI CTRYAG 1 cut(s) 105
SfoI GGCGCC 1 cut(s) 450
SinI GGWCC 1 cut(s) 508
SmiMI CAYNNNNRTG 2 cut(s) 312, 603
SpeI ACTAGT 1 cut(s) 334
Sse9I AATT 3 cut(s) 279, 441, 776
SsiI CCGC 2 cut(s) 138, 419
SspDI GGCGCC 1 cut(s) 448
SspI AATATT 1 cut(s) 749
SspMI CTAG 2 cut(s) 335, 771
StyD4I CCNGG 3 cut(s) 391, 504, 624
StyI CCWWGG 2 cut(s) 511, 652
TaaI ACNGT 2 cut(s) 106, 588
TasI AATT 3 cut(s) 279, 441, 776
TauI GCSGC 2 cut(s) 140, 421
TfiI GAWTC 1 cut(s) 493
Tru1I TTAA 4 cut(s) 71, 144, 278, 312
Tru9I TTAA 4 cut(s) 71, 144, 278, 312
TscAI CASTG 1 cut(s) 593
TseI GCWGC 1 cut(s) 428
TspDTI ATGAA 1 cut(s) 282
TspRI CASTG 1 cut(s) 593
Tth111I GACNNNGTC 1 cut(s) 506
VpaK11BI GGWCC 1 cut(s) 508
VspI ATTAAT 1 cut(s) 278
XapI RAATTY 1 cut(s) 776
XceI RCATGY 1 cut(s) 376
XmnI GAANNNNTTC 1 cut(s) 41
XspI CTAG 2 cut(s) 335, 771
Zsp2I ATGCAT 2 cut(s) 472, 718
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.