pycom17g02700

Encoded by

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
1815306 .. 1817486
2181 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1590 bp
ATGTTTTCCTTTACTCCTAAAGATGTAAACACCGTAAGGACATCAAGGGGATTCCAAGATACACATGCTGGATATGAGAAGGCGTTGGTGGAACTAGCTTCAACCATTCAGCTTTCAAGAAATATTTTTGTTGCCCTTATTTCACTGCAATCTTGGAAGTCCTTTGTGCGACGTTGGCTGGGGGCGGATATCTTATCCTTTGATACTCAAGTCTCCTCTGTTGTCTTGGATAAAACCGCTAAAGCTGCTAGTGACATTCTGAAGAGTATGATAAAAGCAGCAGAAGAGGTTATTCCTAGATCTGCTGAAAATATTGCACTGGCTGTTGGTGCACTTTGTGCGGTCTTGCCTCCATCTGCTCATACTGTTAAATCAGCTGCCTCAAAATTTCTGTTGAAGTGGTTGGTCCAGCCTGAACATGAACACCGCAGATGGTCTGCTGCAATTTCTCTTGGATTGATCTCAAGTTGCCTACATGTAACTGATCATAAGCAAAAGTTTGAGAATATCACTGGACTTGTCGAGGTTATGTGTAGAAGCAGTAGCACCCTTGTTAGAGGAGCTTGTGGGGTTGCCTTGGGTTTTTGTTGCCAAGATCTTCTGACCAGAGTTGATGCTGCTGGTAAATCTAACATGGAAAAGGAAACAGGCAAGATGTCGGAAACAGACTTGCTTGGTATGATAGTTAAGGCGTTATCCCTGGTGATAAGTCAGCTCACTCAGTTTCCATCTGATGTTTTGGAAAGTCTGTCTGCATATTTCCCACCTAGCACTTTTGATATAGATGTGAATACAACTTCTGAACTGTCACATGAGAACTCTGATGACTTCCTCGAAGATATCTGGGGTGTTGCTGGACTTGTTCTTGGTTTGGCGAGTACTGTTGGTGCAATGTACAGGGCTGGGGCACATGATGCTGTTCTTAAGATAAAGGGCTTAATTGTTTCATGGATTCCACATATGACTACTCTGGTTCAAGGGTCTGCGTCTTGCTCTCGGGGTTCTGAGATGGTCTTATCAATAGGGTCCTGTCTTGCACTTCCAATTATAGTAGAATTCTGCCAGAGAGTAGAACTGATGGATGATAATGAAGTACATCATTTAGTGAATGGCTATAAGGAGCTCATTTCTGAATTGGTCTCTGTAAAAAAATCTGGGACCTTCTATCAAAGCTTACTGATGTCATCTTGTGTAGGAGCCGGAAACCTCCTAGCCTGTACACTGAACGGAGGGTTGCACTTTGTTGAGGTTGAACATGTAAAAGGTCTACTGGAATTGTTCAGAAAATGCTATTCAAATCCTTATCCTCCTTTAGTCCATCTGGGTGGGATGCTTGGACTTGTTAATGCTCTAGGAGCAGGTGCTGGGATCCTGTTTGACATGCAGCGTCCAACCTCAGTGCAGACAGCTTATGACCACAAGGAATCTTGCTATCTCATGGGTCCTCTACTTTCAAGTCCTACTTGTGAGCAGTATTTGACATCGTTGATGCAGGATATATTTCTTGTTGCACAGAATTCTGATCGATCGTCAATTAGCAGCTTCGTTTCTTCGAAATCATTTGTTTACCAAGGAAGTTGTCAATGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

530

Amino Acids

57.32

Weight (kDa)

6.02

Isoelectric Point (pI)

39.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1349
Acc36I ACCTGC 1 cut(s) 1349
AccI GTMKAC 1 cut(s) 1267
AciI CCGC 4 cut(s) 185, 237, 341, 427
AclWI GGATC 2 cut(s) 1363, 1376
AcsI RAATTY 3 cut(s) 386, 1055, 1516
AcuI CTGAAG 1 cut(s) 281
AdeI CACNNNGTG 1 cut(s) 338
AfaI GTAC 4 cut(s) 880, 896, 1095, 1219
AflII CTTAAG 1 cut(s) 923
AflIII ACRYGT 2 cut(s) 475, 1255
AgsI TTSAA 7 cut(s) 102, 117, 397, 977, 1253, 1296, 1455
AjnI CCWGG 1 cut(s) 699
Alw21I GWGCWC 2 cut(s) 334, 1125
Alw26I GTCTC 2 cut(s) 217, 1144
Alw44I GTGCAC 1 cut(s) 330
AlwI GGATC 2 cut(s) 1363, 1376
AlwNI CAGNNNCTG 1 cut(s) 1364
Ama87I CYCGRG 1 cut(s) 996
ApaLI GTGCAC 1 cut(s) 330
ApeKI GCWGC 7 cut(s) 245, 278, 377, 440, 617, 1384, 1539
ApoI RAATTY 3 cut(s) 386, 1055, 1516
AspS9I GGNCC 4 cut(s) 406, 1026, 1158, 1442
AsuHPI GGTGA 1 cut(s) 715
AsuII TTCGAA 1 cut(s) 1553
AvaI CYCGRG 1 cut(s) 996
AvaII GGWCC 4 cut(s) 406, 1026, 1158, 1442
BaeGI GKGCMC 2 cut(s) 334, 910
BaeI ACNNNNGTAYC 2 cut(s) 195, 228
BamHI GGATCC 1 cut(s) 1368
BanII GRGCYC 1 cut(s) 1125
Bbv12I GWGCWC 2 cut(s) 334, 1125
BbvI GCAGC 7 cut(s) 232, 290, 364, 427, 604, 1396, 1551
BccI CCATC 6 cut(s) 361, 426, 736, 1003, 1072, 1326
BciT130I CCWGG 1 cut(s) 701
BclI TGATCA 1 cut(s) 484
BcoDI GTCTC 2 cut(s) 217, 1144
BfaI CTAG 6 cut(s) 95, 249, 297, 768, 1211, 1352
BfrI CTTAAG 1 cut(s) 923
BfuAI ACCTGC 1 cut(s) 1349
BglII AGATCT 2 cut(s) 299, 595
BisI GCNGC 7 cut(s) 246, 279, 378, 441, 618, 1385, 1540
BlsI GCNGC 7 cut(s) 247, 280, 379, 442, 619, 1386, 1541
BmcAI AGTACT 1 cut(s) 880
Bme1390I CCNGG 1 cut(s) 701
Bme18I GGWCC 4 cut(s) 406, 1026, 1158, 1442
BmeT110I CYCGRG 1 cut(s) 996
BmgT120I GGNCC 4 cut(s) 406, 1026, 1158, 1442
BmiI GGNNCC 5 cut(s) 1027, 1159, 1198, 1370, 1443
BmrFI CCNGG 1 cut(s) 701
BmsI GCATC 4 cut(s) 604, 904, 1320, 1479
Bpu14I TTCGAA 1 cut(s) 1553
BpuEI CTTGAG 2 cut(s) 192, 448
Bsa29I ATCGAT 1 cut(s) 1525
BsaI GGTCTC 1 cut(s) 1144
BsaJI CCNNGG 3 cut(s) 576, 699, 1570
Bse1I ACTGG 3 cut(s) 324, 517, 1275
Bse3DI GCAATG 1 cut(s) 897
BseBI CCWGG 1 cut(s) 701
BseCI ATCGAT 1 cut(s) 1525
BseDI CCNNGG 3 cut(s) 576, 699, 1570
BseGI GGATG 2 cut(s) 1087, 1335
BseMI GCAATG 1 cut(s) 897
BseMII CTCAG 3 cut(s) 734, 996, 1410
BseNI ACTGG 3 cut(s) 324, 517, 1275
BseRI GAGGAG 2 cut(s) 205, 573
BseSI GKGCMC 2 cut(s) 334, 910
BseXI GCAGC 7 cut(s) 232, 290, 364, 427, 604, 1396, 1551
BseYI CCCAGC 3 cut(s) 178, 902, 1364
BsgI GTGCAG 1 cut(s) 1421
Bsh1285I CGRYCG 1 cut(s) 1529
BshVI ATCGAT 1 cut(s) 1525
BsiEI CGRYCG 1 cut(s) 1529
BsiHKAI GWGCWC 2 cut(s) 334, 1125
BsiHKCI CYCGRG 1 cut(s) 996
BsiSI CCGG 1 cut(s) 1200
BslFI GGGAC 1 cut(s) 1171
BsmAI GTCTC 2 cut(s) 217, 1144
BsmFI GGGAC 1 cut(s) 1171
Bso31I GGTCTC 1 cut(s) 1144
BsoBI CYCGRG 1 cut(s) 996
Bsp119I TTCGAA 1 cut(s) 1553
Bsp1286I GDGCHC 3 cut(s) 334, 910, 1125
Bsp1407I TGTACA 2 cut(s) 894, 1217
Bsp143I GATC 7 cut(s) 299, 459, 484, 595, 1368, 1522, 1526
BspACI CCGC 4 cut(s) 185, 237, 341, 427
BspCNI CTCAG 3 cut(s) 733, 997, 1409
BspDI ATCGAT 1 cut(s) 1525
BspLI GGNNCC 5 cut(s) 1027, 1159, 1198, 1370, 1443
BspMI ACCTGC 1 cut(s) 1349
BspPI GGATC 2 cut(s) 1363, 1376
BspT104I TTCGAA 1 cut(s) 1553
BspTI CTTAAG 1 cut(s) 923
BspTNI GGTCTC 1 cut(s) 1144
BsrDI GCAATG 1 cut(s) 897
BsrGI TGTACA 2 cut(s) 894, 1217
BsrI ACTGG 3 cut(s) 324, 517, 1275
BssECI CCNNGG 3 cut(s) 576, 699, 1570
BssMI GATC 7 cut(s) 299, 459, 484, 595, 1368, 1522, 1526
BssT1I CCWWGG 2 cut(s) 576, 1570
Bst2UI CCWGG 1 cut(s) 701
Bst4CI ACNGT 4 cut(s) 34, 367, 807, 883
Bst6I CTCTTC 2 cut(s) 257, 279
BstAFI CTTAAG 1 cut(s) 923
BstAPI GCANNNNNTGC 2 cut(s) 338, 914
BstAUI TGTACA 2 cut(s) 894, 1217
BstBI TTCGAA 1 cut(s) 1553
BstDEI CTNAG 3 cut(s) 720, 1005, 1396
BstF5I GGATG 2 cut(s) 1087, 1335
BstKTI GATC 7 cut(s) 302, 462, 487, 598, 1371, 1525, 1529
BstMAI GTCTC 2 cut(s) 217, 1144
BstMBI GATC 7 cut(s) 299, 459, 484, 595, 1368, 1522, 1526
BstMCI CGRYCG 1 cut(s) 1529
BstMWI GCNNNNNNNGC 6 cut(s) 175, 245, 329, 338, 914, 1355
BstNI CCWGG 1 cut(s) 701
BstNSI RCATGY 4 cut(s) 68, 479, 1259, 1384
BstSCI CCNGG 1 cut(s) 699
BstSLI GKGCMC 2 cut(s) 334, 910
BstV1I GCAGC 7 cut(s) 232, 290, 364, 427, 604, 1396, 1551
BstX2I RGATCY 3 cut(s) 299, 595, 1368
BstXI CCANNNNNNTGG 1 cut(s) 1325
BstYI RGATCY 3 cut(s) 299, 595, 1368
Bsu15I ATCGAT 1 cut(s) 1525
BsuTUI ATCGAT 1 cut(s) 1525
BtsCI GGATG 2 cut(s) 1087, 1335
BtsI GCAGTG 1 cut(s) 143
BtsIMutI CAGTG 5 cut(s) 143, 317, 510, 1220, 1404
BveI ACCTGC 1 cut(s) 1349
CaiI CAGNNNCTG 1 cut(s) 1364
Cfr13I GGNCC 4 cut(s) 406, 1026, 1158, 1442
ClaI ATCGAT 1 cut(s) 1525
CseI GACGC 2 cut(s) 975, 1376
Csp6I GTAC 4 cut(s) 879, 895, 1094, 1218
CviQI GTAC 4 cut(s) 879, 895, 1094, 1218
DdeI CTNAG 3 cut(s) 720, 1005, 1396
DpnI GATC 7 cut(s) 301, 461, 486, 597, 1370, 1524, 1528
DpnII GATC 7 cut(s) 299, 459, 484, 595, 1368, 1522, 1526
DraIII CACNNNGTG 1 cut(s) 338
Eam1104I CTCTTC 2 cut(s) 257, 279
EarI CTCTTC 2 cut(s) 257, 279
EciI GGCGGA 1 cut(s) 200
Ecl136II GAGCTC 1 cut(s) 1123
Eco130I CCWWGG 2 cut(s) 576, 1570
Eco24I GRGCYC 1 cut(s) 1125
Eco31I GGTCTC 1 cut(s) 1144
Eco32I GATATC 2 cut(s) 190, 841
Eco47I GGWCC 4 cut(s) 406, 1026, 1158, 1442
Eco53kI GAGCTC 1 cut(s) 1123
Eco57I CTGAAG 1 cut(s) 281
Eco88I CYCGRG 1 cut(s) 996
EcoICRI GAGCTC 1 cut(s) 1123
EcoO109I RGGNCCY 3 cut(s) 1026, 1158, 1442
EcoRI GAATTC 2 cut(s) 1055, 1516
EcoRII CCWGG 1 cut(s) 699
EcoRV GATATC 2 cut(s) 190, 841
EcoT14I CCWWGG 2 cut(s) 576, 1570
EcoT38I GRGCYC 1 cut(s) 1125
ErhI CCWWGG 2 cut(s) 576, 1570
FalI AAGNNNNNCTT 2 cut(s) 1447, 1479
FaqI GGGAC 1 cut(s) 1171
FauNDI CATATG 1 cut(s) 960
FbaI TGATCA 1 cut(s) 484
FblI GTMKAC 1 cut(s) 1267
Fnu4HI GCNGC 7 cut(s) 246, 279, 378, 441, 618, 1385, 1540
FokI GGATG 2 cut(s) 1094, 1342
FriOI GRGCYC 1 cut(s) 1125
Fsp4HI GCNGC 7 cut(s) 246, 279, 378, 441, 618, 1385, 1540
FspBI CTAG 6 cut(s) 95, 249, 297, 768, 1211, 1352
GluI GCNGC 7 cut(s) 246, 279, 378, 441, 618, 1385, 1540
GsaI CCCAGC 3 cut(s) 182, 906, 1368
HapII CCGG 1 cut(s) 1200
HgaI GACGC 2 cut(s) 975, 1376
HindIII AAGCTT 1 cut(s) 1171
HinfI GANTC 3 cut(s) 51, 952, 1424
HpaII CCGG 1 cut(s) 1200
HphI GGTGA 1 cut(s) 715
Hpy166II GTNNAC 5 cut(s) 28, 332, 1220, 1268, 1567
Hpy188III TCNNGA 1 cut(s) 117
Hpy8I GTNNAC 5 cut(s) 28, 332, 1220, 1268, 1567
Hpy99I CGWCG 1 cut(s) 174
HpyAV CCTTC 2 cut(s) 73, 1171
HpyCH4III ACNGT 4 cut(s) 34, 367, 807, 883
HpyCH4IV ACGT 1 cut(s) 172
HpyF10VI GCNNNNNNNGC 6 cut(s) 175, 245, 329, 338, 914, 1355
HpyF3I CTNAG 3 cut(s) 720, 1005, 1396
HpySE526I ACGT 1 cut(s) 172
Ksp22I TGATCA 1 cut(s) 484
Kzo9I GATC 7 cut(s) 299, 459, 484, 595, 1368, 1522, 1526
LmnI GCTCC 4 cut(s) 560, 1120, 1196, 1355
Lsp1109I GCAGC 7 cut(s) 232, 290, 364, 427, 604, 1396, 1551
LweI GCATC 4 cut(s) 604, 904, 1320, 1479
MaeI CTAG 6 cut(s) 95, 249, 297, 768, 1211, 1352
MaeII ACGT 1 cut(s) 172
MaeIII GTNAC 3 cut(s) 251, 478, 807
MalI GATC 7 cut(s) 301, 461, 486, 597, 1370, 1524, 1528
MboI GATC 7 cut(s) 299, 459, 484, 595, 1368, 1522, 1526
MboII GAAGA 5 cut(s) 274, 296, 590, 848, 1542
MflI RGATCY 3 cut(s) 299, 595, 1368
MhlI GDGCHC 3 cut(s) 334, 910, 1125
MluCI AATT 9 cut(s) 386, 444, 939, 1044, 1055, 1133, 1274, 1516, 1533
MmeI TCCRAC 2 cut(s) 639, 1415
MseI TTAA 5 cut(s) 369, 687, 924, 938, 1344
MslI CAYNNNNRTG 1 cut(s) 1323
MspA1I CMGCKG 1 cut(s) 377
MspCI CTTAAG 1 cut(s) 923
MspI CCGG 1 cut(s) 1200
MspR9I CCNGG 1 cut(s) 701
MvaI CCWGG 1 cut(s) 701
MwoI GCNNNNNNNGC 6 cut(s) 175, 245, 329, 338, 914, 1355
NdeI CATATG 1 cut(s) 960
NdeII GATC 7 cut(s) 299, 459, 484, 595, 1368, 1522, 1526
NlaIV GGNNCC 5 cut(s) 1027, 1159, 1198, 1370, 1443
NmuCI GTSAC 2 cut(s) 251, 807
NspI RCATGY 4 cut(s) 68, 479, 1259, 1384
NspV TTCGAA 1 cut(s) 1553
PaqCI CACCTGC 1 cut(s) 1349
PciI ACATGT 2 cut(s) 475, 1255
PfeI GAWTC 3 cut(s) 51, 952, 1424
PkrI GCNGC 7 cut(s) 247, 280, 379, 442, 619, 1386, 1541
Ple19I CGATCG 1 cut(s) 1529
PpuMI RGGWCCY 3 cut(s) 1026, 1158, 1442
PscI ACATGT 2 cut(s) 475, 1255
Psp124BI GAGCTC 1 cut(s) 1125
Psp5II RGGWCCY 3 cut(s) 1026, 1158, 1442
Psp6I CCWGG 1 cut(s) 699
PspFI CCCAGC 3 cut(s) 178, 902, 1364
PspGI CCWGG 1 cut(s) 699
PspN4I GGNNCC 5 cut(s) 1027, 1159, 1198, 1370, 1443
PspPI GGNCC 4 cut(s) 406, 1026, 1158, 1442
PspPPI RGGWCCY 3 cut(s) 1026, 1158, 1442
PstNI CAGNNNCTG 1 cut(s) 1364
PsuI RGATCY 3 cut(s) 299, 595, 1368
PvuI CGATCG 1 cut(s) 1529
PvuII CAGCTG 1 cut(s) 377
RsaI GTAC 4 cut(s) 880, 896, 1095, 1219
RsaNI GTAC 4 cut(s) 879, 895, 1094, 1218
RseI CAYNNNNRTG 1 cut(s) 1323
SacI GAGCTC 1 cut(s) 1125
SaqAI TTAA 5 cut(s) 369, 687, 924, 938, 1344
SatI GCNGC 7 cut(s) 246, 279, 378, 441, 618, 1385, 1540
Sau3AI GATC 7 cut(s) 299, 459, 484, 595, 1368, 1522, 1526
Sau96I GGNCC 4 cut(s) 406, 1026, 1158, 1442
ScaI AGTACT 1 cut(s) 880
ScrFI CCNGG 1 cut(s) 701
SduI GDGCHC 3 cut(s) 334, 910, 1125
SfaNI GCATC 4 cut(s) 604, 904, 1320, 1479
SfuI TTCGAA 1 cut(s) 1553
SinI GGWCC 4 cut(s) 406, 1026, 1158, 1442
SmiMI CAYNNNNRTG 1 cut(s) 1323
SmlI CTYRAG 3 cut(s) 207, 463, 923
SmoI CTYRAG 3 cut(s) 207, 463, 923
Sse9I AATT 9 cut(s) 386, 444, 939, 1044, 1055, 1133, 1274, 1516, 1533
SsiI CCGC 4 cut(s) 185, 237, 341, 427
SspI AATATT 2 cut(s) 124, 313
SspMI CTAG 6 cut(s) 95, 249, 297, 768, 1211, 1352
SstI GAGCTC 1 cut(s) 1125
StyD4I CCNGG 1 cut(s) 699
StyI CCWWGG 2 cut(s) 576, 1570
TaaI ACNGT 4 cut(s) 34, 367, 807, 883
TaiI ACGT 1 cut(s) 175
TaqI TCGA 4 cut(s) 522, 834, 1525, 1553
TasI AATT 9 cut(s) 386, 444, 939, 1044, 1055, 1133, 1274, 1516, 1533
TatI WGTACW 4 cut(s) 878, 894, 1093, 1217
TfiI GAWTC 3 cut(s) 51, 952, 1424
Tru1I TTAA 5 cut(s) 369, 687, 924, 938, 1344
Tru9I TTAA 5 cut(s) 369, 687, 924, 938, 1344
TscAI CASTG 5 cut(s) 150, 324, 517, 1227, 1404
TseFI GTSAC 2 cut(s) 251, 807
TseI GCWGC 7 cut(s) 245, 278, 377, 440, 617, 1384, 1539
Tsp45I GTSAC 2 cut(s) 251, 807
TspDTI ATGAA 3 cut(s) 435, 936, 1104
TspGWI ACGGA 1 cut(s) 1242
TspRI CASTG 5 cut(s) 150, 324, 517, 1227, 1404
Vha464I CTTAAG 1 cut(s) 923
VneI GTGCAC 1 cut(s) 330
VpaK11BI GGWCC 4 cut(s) 406, 1026, 1158, 1442
XapI RAATTY 3 cut(s) 386, 1055, 1516
XceI RCATGY 4 cut(s) 68, 479, 1259, 1384
XmiI GTMKAC 1 cut(s) 1267
XspI CTAG 6 cut(s) 95, 249, 297, 768, 1211, 1352
ZrmI AGTACT 1 cut(s) 880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.