pycom17g03290

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
OG0002313
Physical Location & Seq
Forward (+)
2158529 .. 2159894
1366 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1317 bp
ATGGGTTACAGTTCGGAGCAGGAACACAATGACGGCCACGTAGTTTTATTTCCTTTCATGTCTAAAGGCCACACCATCCCACTCCTCCACCTTGCCCACCTCTTCCTCGCCCGCCGCCTCTGCGTCACCGTCTTCACCACCCCCGCCAACCGCTCGTTCATAGACCAATATCTCGCCGATACCTCAGCCACCGTGATCTCCCTCCCTTTCCCTCAAAACATCCCCGAAATTCCCGCTGGCATCGAAAGCACCGACAAGCTCCCTTCCATCGACCTCTTCTACCCTTTCGCCCTCGCCACAATCCACATGCAGTTCGACTTCGAGCGTTCCCTCACAACCCTTCCACGTGTCACCTTCATGGTCTCCGACGGGTTCTTCTGGTGGACACTCGACTCCGCCGCCAAGTTTGGGTTCCCCAGATTCGTCTTCTACGGCTTCGGAAACTACGCCTTGTCCGTGTCCAGCTTCGTCAGCCAGAACAGGCTCCTGCATGGAGCCGAGTCTGACGACGAGTTGATCACCGTGACTCGGTTTCCTTGGATCAAAATTACAAAAAAGTACTTCGATGATGCCTTTAGAGGCGCCGATCATAACCGACAAGCGTCTCAAGCCTCCGAGTTCCACGTCATGTCTGTCGTGGCTGCGGCTCGCAGCCACGGCATGATAGTCAACAGTTTCTACGAACTTGAGCCCATGTTCACTGACTATTGGAACACTGAGTGTGGGCCCAGGGCCTGGTGTGTGGGCCCTCTTTTCCACCTTGCGCAAGATGAACCTCACGATGATCTCGGTGATAAGCCCACGTGGGTTGATTGGCTGGACAAAAAACTGGAGGAAGGAAGTAAGGTCTTGTACGTCGCTTTTGGGTCACAAGCTGAGCTGTCAGCTGAACAGATCCAAGAGATAGCACTAGGGCTGGAAAACTCAATGGTCAACTTTTTGTGGGTCATAAGAAGTAAACAGTACTCACCAGACACTGCCACCTTGGACATTAAAGGGTTTGAGGAGAGAGTGAAGAGGAGGGGAATGGTGGTGAAAGAGTGGGTTGACCAAAAGTGGATTTTAATGCATGAGAGTGTGCAAGGTTTTGTAAGCCACTGCGGATGGAACTCGGTGATGGAGAGCATTTGCGCCGGAGTGCCGATTCTGGCGTGGCCGATGATGGCGGATCAGCCGATCAATGCAAAGTTTGTGGTGGAGGAGGTCAAGGTGGGGCTGAGGGTGGAGACATGCGATGGTTCGCCGAAAGGGGAGAGAAGGGGGAGAAGGCGAGGAGGGAGGCGAAGAAGCTTGCTGAGGTGGCGAGGAAAGCTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0008194 GO:0016740 GO:0016757 GO:0016758 GO:0035251 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0046527 GO:0080043 GO:0080044
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

439

Amino Acids

49.92

Weight (kDa)

6.17

Isoelectric Point (pI)

49.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UDPGT PF00201 283 - 400 1.1e-18 UDP-glucoronosyl and UDP-glucosyl transferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 765
AccB1I GGYRCC 1 cut(s) 581
AccB7I CCANNNNNTGG 1 cut(s) 735
AccBSI CCGCTC 1 cut(s) 153
AclWI GGATC 3 cut(s) 548, 889, 1176
AcoI YGGCCR 2 cut(s) 34, 1154
AcsI RAATTY 1 cut(s) 228
AcvI CACGTG 2 cut(s) 347, 804
AcyI GRCGYC 1 cut(s) 582
AdeI CACNNNGTG 1 cut(s) 720
AfaI GTAC 3 cut(s) 560, 854, 965
AfiI CCNNNNNNNGG 3 cut(s) 408, 528, 735
AflIII ACRYGT 1 cut(s) 346
AjiI CACGTC 1 cut(s) 625
AjnI CCWGG 2 cut(s) 728, 734
AjuI GAANNNNNNNTTGG 4 cut(s) 140, 172, 395, 427
AluBI AGCT 7 cut(s) 259, 465, 875, 880, 887, 1290, 1312
AluI AGCT 7 cut(s) 259, 465, 875, 880, 887, 1290, 1312
Alw26I GTCTC 3 cut(s) 367, 609, 1220
AlwI GGATC 3 cut(s) 548, 889, 1176
AlwNI CAGNNNCTG 2 cut(s) 735, 977
AoxI GGCC 6 cut(s) 34, 67, 725, 732, 745, 1154
ApaI GGGCCC 2 cut(s) 729, 749
ApeKI GCWGC 2 cut(s) 641, 651
ApoI RAATTY 1 cut(s) 228
AspLEI GCGC 3 cut(s) 584, 766, 1133
AspS9I GGNCC 5 cut(s) 725, 726, 732, 745, 746
AsuHPI GGTGA 8 cut(s) 118, 127, 343, 511, 803, 960, 1045, 1126
BaeGI GKGCMC 2 cut(s) 729, 749
BanI GGYRCC 1 cut(s) 581
BanII GRGCYC 3 cut(s) 693, 729, 749
BbrPI CACGTG 2 cut(s) 347, 804
BbsI GAAGAC 2 cut(s) 124, 418
BbvCI CCTCAGC 3 cut(s) 184, 1217, 1295
BbvI GCAGC 2 cut(s) 628, 663
BccI CCATC 6 cut(s) 83, 275, 1098, 1111, 1156, 1229
BceAI ACGGC 3 cut(s) 49, 448, 673
BciT130I CCWGG 2 cut(s) 730, 736
BclI TGATCA 1 cut(s) 516
BcoDI GTCTC 3 cut(s) 367, 609, 1220
BfaI CTAG 1 cut(s) 911
BfoI RGCGCY 1 cut(s) 585
BisI GCNGC 5 cut(s) 115, 399, 642, 645, 652
BlpI GCTNAGC 1 cut(s) 876
BlsI GCNGC 5 cut(s) 116, 400, 643, 646, 653
BmcAI AGTACT 2 cut(s) 560, 965
Bme1390I CCNGG 2 cut(s) 730, 736
BmgBI CACGTC 1 cut(s) 625
BmgT120I GGNCC 5 cut(s) 725, 726, 732, 745, 746
BmiI GGNNCC 6 cut(s) 413, 485, 496, 583, 727, 747
BmrFI CCNGG 2 cut(s) 730, 736
BmsI GCATC 2 cut(s) 249, 559
BoxI GACNNNNGTC 1 cut(s) 601
BpiI GAAGAC 2 cut(s) 124, 418
BpmI CTGGAG 1 cut(s) 851
Bpu10I CCTNAGC 3 cut(s) 184, 1217, 1295
Bpu1102I GCTNAGC 1 cut(s) 876
BpuEI CTTGAG 2 cut(s) 591, 707
BsaAI YACGTR 3 cut(s) 40, 347, 804
BsaHI GRCGYC 1 cut(s) 582
BsaI GGTCTC 1 cut(s) 367
BsaJI CCNNGG 5 cut(s) 536, 655, 728, 729, 984
Bsc4I CCNNNNNNNGG 3 cut(s) 408, 528, 735
Bse1I ACTGG 1 cut(s) 834
BseBI CCWGG 2 cut(s) 730, 736
BseDI CCNNGG 5 cut(s) 536, 655, 728, 729, 984
BseGI GGATG 3 cut(s) 75, 219, 1109
BseLI CCNNNNNNNGG 3 cut(s) 408, 528, 735
BseMII CTCAG 5 cut(s) 198, 708, 867, 1208, 1286
BseNI ACTGG 1 cut(s) 834
BseRI GAGGAG 5 cut(s) 74, 1019, 1033, 1214, 1287
BseSI GKGCMC 2 cut(s) 729, 749
BseXI GCAGC 2 cut(s) 628, 663
BshFI GGCC 6 cut(s) 36, 69, 727, 734, 747, 1156
BshNI GGYRCC 1 cut(s) 581
BsiSI CCGG 1 cut(s) 1134
BslI CCNNNNNNNGG 3 cut(s) 408, 528, 735
BsmAI GTCTC 3 cut(s) 367, 609, 1220
BsmBI CGTCTC 1 cut(s) 609
BsnI GGCC 6 cut(s) 36, 69, 727, 734, 747, 1156
Bso31I GGTCTC 1 cut(s) 367
Bsp120I GGGCCC 2 cut(s) 725, 745
Bsp1286I GDGCHC 3 cut(s) 693, 729, 749
Bsp143I GATC 8 cut(s) 195, 516, 540, 586, 784, 894, 1168, 1176
Bsp1720I GCTNAGC 1 cut(s) 876
BspANI GGCC 6 cut(s) 36, 69, 727, 734, 747, 1156
BspCNI CTCAG 5 cut(s) 197, 709, 868, 1209, 1287
BspLI GGNNCC 6 cut(s) 413, 485, 496, 583, 727, 747
BspPI GGATC 3 cut(s) 548, 889, 1176
BspT107I GGYRCC 1 cut(s) 581
BspTNI GGTCTC 1 cut(s) 367
BsrBI CCGCTC 1 cut(s) 153
BsrI ACTGG 1 cut(s) 834
BssECI CCNNGG 5 cut(s) 536, 655, 728, 729, 984
BssMI GATC 8 cut(s) 195, 516, 540, 586, 784, 894, 1168, 1176
BssNI GRCGYC 1 cut(s) 582
BssT1I CCWWGG 2 cut(s) 536, 984
Bst2UI CCWGG 2 cut(s) 730, 736
Bst4CI ACNGT 6 cut(s) 11, 130, 193, 523, 674, 963
Bst6I CTCTTC 3 cut(s) 107, 281, 1010
BstACI GRCGYC 1 cut(s) 582
BstBAI YACGTR 3 cut(s) 40, 347, 804
BstC8I GCNNGC 4 cut(s) 112, 238, 649, 1292
BstDEI CTNAG 5 cut(s) 184, 717, 876, 1217, 1295
BstDSI CCRYGG 1 cut(s) 655
BstF5I GGATG 3 cut(s) 75, 219, 1109
BstH2I RGCGCY 1 cut(s) 585
BstHHI GCGC 3 cut(s) 584, 766, 1133
BstKTI GATC 8 cut(s) 198, 519, 543, 589, 787, 897, 1171, 1179
BstMAI GTCTC 3 cut(s) 367, 609, 1220
BstMBI GATC 8 cut(s) 195, 516, 540, 586, 784, 894, 1168, 1176
BstMWI GCNNNNNNNGC 7 cut(s) 120, 246, 471, 608, 657, 1300, 1309
BstNI CCWGG 2 cut(s) 730, 736
BstNSI RCATGY 2 cut(s) 310, 1233
BstPAI GACNNNNGTC 1 cut(s) 601
BstSCI CCNGG 2 cut(s) 728, 734
BstSLI GKGCMC 2 cut(s) 729, 749
BstV1I GCAGC 2 cut(s) 628, 663
BstV2I GAAGAC 2 cut(s) 124, 418
BstX2I RGATCY 1 cut(s) 894
BstYI RGATCY 1 cut(s) 894
BsuRI GGCC 6 cut(s) 36, 69, 727, 734, 747, 1156
BtgI CCRYGG 1 cut(s) 655
BtgZI GCGATG 1 cut(s) 1248
BtrI CACGTC 1 cut(s) 625
BtsCI GGATG 3 cut(s) 75, 219, 1109
BtsI GCAGTG 2 cut(s) 975, 1096
BtsIMutI CAGTG 4 cut(s) 699, 714, 975, 1096
Cac8I GCNNGC 4 cut(s) 112, 238, 649, 1292
CaiI CAGNNNCTG 2 cut(s) 735, 977
CfoI GCGC 3 cut(s) 584, 766, 1133
Cfr13I GGNCC 5 cut(s) 725, 726, 732, 745, 746
CseI GACGC 2 cut(s) 112, 591
Csp6I GTAC 3 cut(s) 559, 853, 964
CspCI CAANNNNNGTGG 4 cut(s) 790, 825, 1173, 1208
CviAII CATG 9 cut(s) 58, 307, 358, 491, 628, 661, 694, 1070, 1230
CviQI GTAC 3 cut(s) 559, 853, 964
DdeI CTNAG 5 cut(s) 184, 717, 876, 1217, 1295
DinI GGCGCC 1 cut(s) 583
DpnI GATC 8 cut(s) 197, 518, 542, 588, 786, 896, 1170, 1178
DpnII GATC 8 cut(s) 195, 516, 540, 586, 784, 894, 1168, 1176
DraIII CACNNNGTG 1 cut(s) 720
EaeI YGGCCR 2 cut(s) 34, 1154
Eam1104I CTCTTC 3 cut(s) 107, 281, 1010
EarI CTCTTC 3 cut(s) 107, 281, 1010
EciI GGCGGA 2 cut(s) 385, 1181
Eco130I CCWWGG 2 cut(s) 536, 984
Eco24I GRGCYC 3 cut(s) 693, 729, 749
Eco31I GGTCTC 1 cut(s) 367
Eco72I CACGTG 2 cut(s) 347, 804
EcoO109I RGGNCCY 2 cut(s) 732, 746
EcoRII CCWGG 2 cut(s) 728, 734
EcoT14I CCWWGG 2 cut(s) 536, 984
EcoT22I ATGCAT 1 cut(s) 1071
EcoT38I GRGCYC 3 cut(s) 693, 729, 749
EgeI GGCGCC 1 cut(s) 583
EheI GGCGCC 1 cut(s) 583
ErhI CCWWGG 2 cut(s) 536, 984
Esp3I CGTCTC 1 cut(s) 609
FaeI CATG 9 cut(s) 61, 310, 361, 494, 631, 664, 697, 1073, 1233
FatI CATG 9 cut(s) 57, 306, 357, 490, 627, 660, 693, 1069, 1229
FauI CCCGC 3 cut(s) 119, 151, 241
FbaI TGATCA 1 cut(s) 516
Fnu4HI GCNGC 5 cut(s) 115, 399, 642, 645, 652
FokI GGATG 3 cut(s) 62, 206, 1116
FriOI GRGCYC 3 cut(s) 693, 729, 749
Fsp4HI GCNGC 5 cut(s) 115, 399, 642, 645, 652
FspBI CTAG 1 cut(s) 911
FspI TGCGCA 1 cut(s) 765
GlaI GCGC 3 cut(s) 583, 765, 1132
GluI GCNGC 5 cut(s) 115, 399, 642, 645, 652
GsuI CTGGAG 1 cut(s) 851
HaeII RGCGCY 1 cut(s) 585
HaeIII GGCC 6 cut(s) 36, 69, 727, 734, 747, 1156
HapII CCGG 1 cut(s) 1134
HgaI GACGC 2 cut(s) 112, 591
HhaI GCGC 3 cut(s) 584, 766, 1133
Hin1I GRCGYC 1 cut(s) 582
Hin1II CATG 9 cut(s) 61, 310, 361, 494, 631, 664, 697, 1073, 1233
Hin6I GCGC 3 cut(s) 582, 764, 1131
HinP1I GCGC 3 cut(s) 582, 764, 1131
HincII GTYRAC 3 cut(s) 670, 934, 1048
HindII GTYRAC 3 cut(s) 670, 934, 1048
HindIII AAGCTT 1 cut(s) 1288
HinfI GANTC 5 cut(s) 392, 420, 500, 526, 1144
HpaII CCGG 1 cut(s) 1134
HphI GGTGA 8 cut(s) 118, 127, 343, 511, 803, 960, 1045, 1126
Hpy166II GTNNAC 6 cut(s) 384, 670, 699, 934, 959, 1048
Hpy188I TCNGA 5 cut(s) 16, 367, 440, 505, 616
Hpy188III TCNNGA 1 cut(s) 779
Hpy8I GTNNAC 6 cut(s) 384, 670, 699, 934, 959, 1048
Hpy99I CGWCG 3 cut(s) 371, 512, 860
HpyAV CCTTC 6 cut(s) 273, 350, 364, 830, 1251, 1260
HpyCH4III ACNGT 6 cut(s) 11, 130, 193, 523, 674, 963
HpyCH4IV ACGT 5 cut(s) 39, 346, 624, 803, 855
HpyCH4V TGCA 5 cut(s) 310, 490, 1069, 1081, 1184
HpyF10VI GCNNNNNNNGC 7 cut(s) 120, 246, 471, 608, 657, 1300, 1309
HpyF3I CTNAG 5 cut(s) 184, 717, 876, 1217, 1295
HpySE526I ACGT 5 cut(s) 39, 346, 624, 803, 855
Hsp92I GRCGYC 1 cut(s) 582
Hsp92II CATG 9 cut(s) 61, 310, 361, 494, 631, 664, 697, 1073, 1233
HspAI GCGC 3 cut(s) 582, 764, 1131
KasI GGCGCC 1 cut(s) 581
Ksp22I TGATCA 1 cut(s) 516
Kzo9I GATC 8 cut(s) 195, 516, 540, 586, 784, 894, 1168, 1176
LmnI GCTCC 4 cut(s) 16, 264, 489, 494
Lsp1109I GCAGC 2 cut(s) 628, 663
LweI GCATC 2 cut(s) 249, 559
MaeI CTAG 1 cut(s) 911
MaeII ACGT 5 cut(s) 39, 346, 624, 803, 855
MaeIII GTNAC 5 cut(s) 5, 124, 349, 523, 867
MalI GATC 8 cut(s) 197, 518, 542, 588, 786, 896, 1170, 1178
MbiI CCGCTC 1 cut(s) 153
MboI GATC 8 cut(s) 195, 516, 540, 586, 784, 894, 1168, 1176
MboII GAAGA 7 cut(s) 94, 124, 268, 367, 418, 1027, 1296
MflI RGATCY 1 cut(s) 894
MhlI GDGCHC 3 cut(s) 693, 729, 749
MluCI AATT 2 cut(s) 228, 546
Mly113I GGCGCC 1 cut(s) 582
MlyI GAGTC 3 cut(s) 386, 509, 520
MmeI TCCRAC 1 cut(s) 390
Mph1103I ATGCAT 1 cut(s) 1071
MseI TTAA 2 cut(s) 993, 1064
MslI CAYNNNNRTG 2 cut(s) 356, 1074
MspA1I CMGCKG 2 cut(s) 236, 887
MspI CCGG 1 cut(s) 1134
MspR9I CCNGG 2 cut(s) 730, 736
MvaI CCWGG 2 cut(s) 730, 736
MwoI GCNNNNNNNGC 7 cut(s) 120, 246, 471, 608, 657, 1300, 1309
NarI GGCGCC 1 cut(s) 582
NdeII GATC 8 cut(s) 195, 516, 540, 586, 784, 894, 1168, 1176
NlaIII CATG 9 cut(s) 61, 310, 361, 494, 631, 664, 697, 1073, 1233
NlaIV GGNNCC 6 cut(s) 413, 485, 496, 583, 727, 747
NmeAIII GCCGAG 1 cut(s) 523
NmuCI GTSAC 4 cut(s) 124, 349, 523, 867
NsbI TGCGCA 1 cut(s) 765
NsiI ATGCAT 1 cut(s) 1071
NspI RCATGY 2 cut(s) 310, 1233
PasI CCCWGGG 1 cut(s) 729
PcsI WCGNNNNNNNCGW 2 cut(s) 249, 453
PfeI GAWTC 2 cut(s) 420, 1144
PflMI CCANNNNNTGG 1 cut(s) 735
PkrI GCNGC 5 cut(s) 116, 400, 643, 646, 653
PleI GAGTC 3 cut(s) 386, 508, 520
PluTI GGCGCC 1 cut(s) 585
PmaCI CACGTG 2 cut(s) 347, 804
PmlI CACGTG 2 cut(s) 347, 804
PpsI GAGTC 3 cut(s) 386, 508, 520
Ppu21I YACGTR 3 cut(s) 40, 347, 804
PshAI GACNNNNGTC 1 cut(s) 601
Psp6I CCWGG 2 cut(s) 728, 734
PspCI CACGTG 2 cut(s) 347, 804
PspGI CCWGG 2 cut(s) 728, 734
PspN4I GGNNCC 6 cut(s) 413, 485, 496, 583, 727, 747
PspOMI GGGCCC 2 cut(s) 725, 745
PspPI GGNCC 5 cut(s) 725, 726, 732, 745, 746
PstNI CAGNNNCTG 2 cut(s) 735, 977
PsuI RGATCY 1 cut(s) 894
PvuII CAGCTG 1 cut(s) 887
RsaI GTAC 3 cut(s) 560, 854, 965
RsaNI GTAC 3 cut(s) 559, 853, 964
RseI CAYNNNNRTG 2 cut(s) 356, 1074
SaqAI TTAA 2 cut(s) 993, 1064
SatI GCNGC 5 cut(s) 115, 399, 642, 645, 652
Sau3AI GATC 8 cut(s) 195, 516, 540, 586, 784, 894, 1168, 1176
Sau96I GGNCC 5 cut(s) 725, 726, 732, 745, 746
ScaI AGTACT 2 cut(s) 560, 965
SchI GAGTC 3 cut(s) 386, 509, 520
ScrFI CCNGG 2 cut(s) 730, 736
SduI GDGCHC 3 cut(s) 693, 729, 749
SfaNI GCATC 2 cut(s) 249, 559
SfoI GGCGCC 1 cut(s) 583
SmiMI CAYNNNNRTG 2 cut(s) 356, 1074
SmlI CTYRAG 2 cut(s) 606, 686
SmoI CTYRAG 2 cut(s) 606, 686
Sse9I AATT 2 cut(s) 228, 546
SspDI GGCGCC 1 cut(s) 581
SspMI CTAG 1 cut(s) 911
StyD4I CCNGG 2 cut(s) 728, 734
StyI CCWWGG 2 cut(s) 536, 984
TaaI ACNGT 6 cut(s) 11, 130, 193, 523, 674, 963
TaiI ACGT 5 cut(s) 42, 349, 627, 806, 858
TaqI TCGA 6 cut(s) 243, 270, 315, 321, 390, 564
TasI AATT 2 cut(s) 228, 546
TatI WGTACW 2 cut(s) 558, 963
TauI GCSGC 3 cut(s) 117, 401, 647
TfiI GAWTC 2 cut(s) 420, 1144
Tru1I TTAA 2 cut(s) 993, 1064
Tru9I TTAA 2 cut(s) 993, 1064
TscAI CASTG 4 cut(s) 706, 721, 982, 1103
TseFI GTSAC 4 cut(s) 124, 349, 523, 867
TseI GCWGC 2 cut(s) 641, 651
Tsp45I GTSAC 4 cut(s) 124, 349, 523, 867
TspDTI ATGAA 4 cut(s) 46, 148, 346, 786
TspGWI ACGGA 1 cut(s) 445
TspRI CASTG 4 cut(s) 706, 721, 982, 1103
Van91I CCANNNNNTGG 1 cut(s) 735
XapI RAATTY 1 cut(s) 228
XceI RCATGY 2 cut(s) 310, 1233
XspI CTAG 1 cut(s) 911
ZrmI AGTACT 2 cut(s) 560, 965
Zsp2I ATGCAT 1 cut(s) 1071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.