Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005891

Physical Location & Seq

Genomic Coordinates Reverse (-)

54598316 .. 54604401

Gene Structure 6086 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1467 bp

ATGTTCTTGCTTAAAGTCCCACGCTACTCCCTACTAAACTGCGAACAACGACGCAAAAAAATGCTCAGGTCCTTCGCCAAAAGTTCCCTCCACCTCTATCTCCACCAAAACCCAAACCAAAACCCAAAAACCCTCCACCTCCTCCTCCACCTCCGCCACCTCACCACCCTCAATGCCTTCCCTCCCCAAAAACCCGCCGTGGCCCCCACCAAAGACGACTACTTCTCCGCCATTCACCACATCACCAACATCGTCCGCCGCGACCACTTCATGGAGCGCACCCTCAACAAGCTCCGCATCTCCGTCGACTCCGACCTCGTCTTCCGCGTCCTCCGCGCCTGCTCCGCCTCCTCCACCGAGTCCCTCCGCTTCTTCAATTGGGCCCGCACCCACCACCCCACCTACCACCCCACCACCCTCGAAACCGAAGAGCTCGTCAAGACCCTCGCCCGCTCCAAAAAATACGAGTCCATGTGGAAAATCCTCGACTCCATGAAAACCCACCACGGTTTAACACTCTCCCAGGACACCCTTTGCTTCATTATCCAAGAGTACGGCAAGCACGGCCTGATCGACCAGGCCGTTGAGCTCTTCAATCGAGCTCCCAAGACCTTTAACTGCTTGCAGTCGGTGGAAGTTCACAACGCTCTGCTCTTCTCTCTCTGCCAGACTAAGCTCTTTCACGGCGCTTATGCCTTGGTGAGGAGGCTGATTCGGAAAGGGCTCGCTCCGAATAAGATGACGTATTCCATTTTGGTCAATGCTTGGTGTTCTAATGGGAAGATGAAGGAGGCGCAGCTGTTCTTGGAGGAGATGAGTGAGAAGGGGTTTAATCCGCCGGTTCGAGGCCGTGATCTGCTGGTTGAGGGGTTGCTCAATGCTGGTTATATTGAGGCTGCCAAAGATATGGTAAGGAAAATGGTGAAGGAAAACTGTGTGCCTGATGTTTCTACTTTTAATGCATTGTTAGAAGCTATTTGTACGTCTGGGGAGGTTGAGTTTTGCATTGGTCTTTATTGGGAGGCAACTGGATTGGGGCTTTGTCCTGATATTAATACTTATAAAGTGTTGATACCGGCGGTTTCGAAGGTTGGGAGGATGGATGATGCATTTAGGCTTTTGCATAATGCGATTGAGGACGGGCATAGGCCGTTTCCGGGCTTGTATGCCCCTATTGTTAAGGGGATGTGTAGGAATGGTCAGTTTGATGATGCATTTTGTTTCTTTAGTGAGATGAAGGTCAAGGGTCATCCTCCGAATCGGCCGGTATATACCATGTTGATAACTATGGCTGGACGTGGAGGCCGGTTTGTTGAGGCTGCGAATTACTTGATGGAGATGACTGAGTTGGGGTTGATGCCGATTTCACGGTGCTTTGATTTGGTCACGGATGGATTGAAGAATAGTGGGAAGCATGATCTGGCTAAGAGAATTGAGCAATTGGAAGTTTCTCTTAGGGGTACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090615 GO:0090617 GO:0097159 GO:0140053 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

488

Amino Acids

55.59

Weight (kDa)

9.19

Isoelectric Point (pI)

42.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	213 - 257	8.4e-07	PPR repeat family
TPR_24	PF23276	236 - 340	3e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	240 - 273	2.8e-10	PPR repeat
PPR	PF01535	248 - 277	8e-06	PPR repeat
PPR_2	PF13041	287 - 327	2.4e-07	PPR repeat family
PPR_2	PF13041	314 - 361	4.6e-06	PPR repeat family
PPR_2	PF13041	392 - 429	3.2e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18390
fragaria_vesca	FvH4_4g11972
malus_domestica	MD04G1235400.v1.1
prunus_persica	Prupe.6G355300_v2.0.a1
pyrus_communis	pycom04g20890
rosa_chinensis	RchiOBHm_Chr7g0230951
rosa_laevigata	RLG00000001439 RLG00000002174 RLG00000002176
rosa_multiflora	Rmu_sc0000453.1_g000016 Rmu_sc0000453.1_g000017 Rmu_sc0002014.1_g000047
rosa_roxburghii	Rroxscaffold_3G00229640 Rroxscaffold_3G00238690 Rroxscaffold_3G00238710 Rroxscaffold_3G00238720 Rroxscaffold_3G00238730
rosa_rugosa	Rorug07G0263500
rosa_samantha	Rh7AG416900 Rh7AG417000 Rh7BG392800 Rh7BG392900 Rh7CG436000 Rh7CG436100 Rh7DG411100 Rh7DG411200
rosa_wichuraiana	Rw1G007620 Rw7G034520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1062
AccB7I	CCANNNNNTGG	1 cut(s)	271
AccBSI	CCGCTC	1 cut(s)	453
AccI	GTMKAC	1 cut(s)	306
AccII	CGCG	3 cut(s)	261, 327, 336
AcoI	YGGCCR	1 cut(s)	1262
AfaI	GTAC	3 cut(s)	554, 982, 1462
AfiI	CCNNNNNNNGG	4 cut(s)	271, 702, 845, 1157
AgsI	TTSAA	3 cut(s)	376, 595, 1399
AjiI	CACGTC	1 cut(s)	1298
AjnI	CCWGG	2 cut(s)	522, 576
AluBI	AGCT	7 cut(s)	292, 433, 589, 602, 676, 799, 974
AluI	AGCT	7 cut(s)	292, 433, 589, 602, 676, 799, 974
Alw21I	GWGCWC	3 cut(s)	435, 591, 604
AoxI	GGCC	8 cut(s)	201, 381, 565, 579, 847, 1148, 1262, 1303
ApaI	GGGCCC	1 cut(s)	385
ApeKI	GCWGC	3 cut(s)	796, 896, 1319
ArsI	GACNNNNNNTTYG	2 cut(s)	420, 452
AseI	ATTAAT	1 cut(s)	1053
AspLEI	GCGC	4 cut(s)	279, 338, 689, 796
AspS9I	GGNCC	4 cut(s)	69, 202, 381, 382
AsuC2I	CCSGG	1 cut(s)	1158
AsuHPI	GGTGA	5 cut(s)	154, 227, 235, 712, 934
AsuII	TTCGAA	1 cut(s)	1085
AvaII	GGWCC	1 cut(s)	69
BaeGI	GKGCMC	1 cut(s)	385
BanII	GRGCYC	5 cut(s)	385, 435, 591, 604, 726
BbsI	GAAGAC	1 cut(s)	313
Bbv12I	GWGCWC	3 cut(s)	435, 591, 604
BbvI	GCAGC	3 cut(s)	808, 883, 1306
BccI	CCATC	3 cut(s)	1093, 1327, 1385
BceAI	ACGGC	7 cut(s)	182, 566, 571, 580, 700, 834, 1135
BcgI	CGANNNNNNTGC	2 cut(s)	286, 320
BciT130I	CCWGG	2 cut(s)	524, 578
BcnI	CCSGG	1 cut(s)	1158
BfoI	RGCGCY	1 cut(s)	690
BisI	GCNGC	4 cut(s)	259, 797, 897, 1320
BlsI	GCNGC	4 cut(s)	260, 798, 898, 1321
Bme1390I	CCNGG	3 cut(s)	524, 578, 1158
Bme18I	GGWCC	1 cut(s)	69
BmgBI	CACGTC	1 cut(s)	1298
BmgT120I	GGNCC	4 cut(s)	69, 202, 381, 382
BmiI	GGNNCC	2 cut(s)	204, 383
BmrFI	CCNGG	3 cut(s)	524, 578, 1158
BmsI	GCATC	4 cut(s)	306, 1096, 1201, 1347
BpiI	GAAGAC	1 cut(s)	313
Bpu10I	CCTNAGC	1 cut(s)	65
Bpu14I	TTCGAA	1 cut(s)	1085
BpuMI	CCSGG	1 cut(s)	1158
BsaJI	CCNNGG	4 cut(s)	198, 505, 522, 696
BsaXI	ACNNNNNCTCC	4 cut(s)	209, 239, 983, 1013
Bsc4I	CCNNNNNNNGG	4 cut(s)	271, 702, 845, 1157
Bse118I	RCCGGY	4 cut(s)	838, 1075, 1264, 1305
Bse1I	ACTGG	1 cut(s)	1033
BseBI	CCWGG	2 cut(s)	524, 578
BseDI	CCNNGG	4 cut(s)	198, 505, 522, 696
BseGI	GGATG	5 cut(s)	1104, 1108, 1191, 1249, 1396
BseLI	CCNNNNNNNGG	4 cut(s)	271, 702, 845, 1157
BseMII	CTCAG	2 cut(s)	79, 1335
BseNI	ACTGG	1 cut(s)	1033
BseRI	GAGGAG	5 cut(s)	131, 134, 340, 718, 824
BseSI	GKGCMC	1 cut(s)	385
BseX3I	CGGCCG	1 cut(s)	1262
BseXI	GCAGC	3 cut(s)	808, 883, 1306
Bsh1236I	CGCG	3 cut(s)	261, 327, 336
Bsh1285I	CGRYCG	1 cut(s)	1265
BshFI	GGCC	8 cut(s)	203, 383, 567, 581, 849, 1150, 1264, 1305
BsiEI	CGRYCG	1 cut(s)	1265
BsiHKAI	GWGCWC	3 cut(s)	435, 591, 604
BsiSI	CCGG	5 cut(s)	839, 1076, 1157, 1265, 1306
BslFI	GGGAC	2 cut(s)	2, 346
BslI	CCNNNNNNNGG	4 cut(s)	271, 702, 845, 1157
BsmFI	GGGAC	2 cut(s)	2, 346
BsnI	GGCC	8 cut(s)	203, 383, 567, 581, 849, 1150, 1264, 1305
Bsp119I	TTCGAA	1 cut(s)	1085
Bsp120I	GGGCCC	1 cut(s)	381
Bsp1286I	GDGCHC	5 cut(s)	385, 435, 591, 604, 726
Bsp143I	GATC	3 cut(s)	570, 853, 1417
BspANI	GGCC	8 cut(s)	203, 383, 567, 581, 849, 1150, 1264, 1305
BspCNI	CTCAG	2 cut(s)	78, 1336
BspFNI	CGCG	3 cut(s)	261, 327, 336
BspLI	GGNNCC	2 cut(s)	204, 383
BspQI	GCTCTTC	3 cut(s)	423, 596, 659
BspT104I	TTCGAA	1 cut(s)	1085
BsrBI	CCGCTC	1 cut(s)	453
BsrFI	RCCGGY	4 cut(s)	838, 1075, 1264, 1305
BsrI	ACTGG	1 cut(s)	1033
BssAI	RCCGGY	4 cut(s)	838, 1075, 1264, 1305
BssECI	CCNNGG	4 cut(s)	198, 505, 522, 696
BssMI	GATC	3 cut(s)	570, 853, 1417
BssT1I	CCWWGG	1 cut(s)	696
Bst2UI	CCWGG	2 cut(s)	524, 578
Bst4CI	ACNGT	3 cut(s)	509, 935, 1371
Bst6I	CTCTTC	3 cut(s)	423, 596, 659
BstBI	TTCGAA	1 cut(s)	1085
BstC8I	GCNNGC	6 cut(s)	340, 385, 451, 560, 623, 726
BstDEI	CTNAG	5 cut(s)	65, 672, 1344, 1425, 1454
BstDSI	CCRYGG	2 cut(s)	198, 505
BstENI	CCTNNNNNAGG	1 cut(s)	700
BstF5I	GGATG	5 cut(s)	1104, 1108, 1191, 1249, 1396
BstFNI	CGCG	3 cut(s)	261, 327, 336
BstH2I	RGCGCY	1 cut(s)	690
BstHHI	GCGC	4 cut(s)	279, 338, 689, 796
BstKTI	GATC	3 cut(s)	573, 856, 1420
BstMBI	GATC	3 cut(s)	570, 853, 1417
BstMCI	CGRYCG	1 cut(s)	1265
BstMWI	GCNNNNNNNGC	3 cut(s)	333, 344, 564
BstNI	CCWGG	2 cut(s)	524, 578
BstSCI	CCNGG	3 cut(s)	522, 576, 1156
BstSLI	GKGCMC	1 cut(s)	385
BstUI	CGCG	3 cut(s)	261, 327, 336
BstV1I	GCAGC	3 cut(s)	808, 883, 1306
BstV2I	GAAGAC	1 cut(s)	313
BstXI	CCANNNNNNTGG	1 cut(s)	907
BstZI	CGGCCG	1 cut(s)	1262
BsuRI	GGCC	8 cut(s)	203, 383, 567, 581, 849, 1150, 1264, 1305
BtgI	CCRYGG	2 cut(s)	198, 505
BtrI	CACGTC	1 cut(s)	1298
BtsCI	GGATG	5 cut(s)	1104, 1108, 1191, 1249, 1396
Cac8I	GCNNGC	6 cut(s)	340, 385, 451, 560, 623, 726
CfoI	GCGC	4 cut(s)	279, 338, 689, 796
Cfr10I	RCCGGY	4 cut(s)	838, 1075, 1264, 1305
Cfr13I	GGNCC	4 cut(s)	69, 202, 381, 382
CseI	GACGC	2 cut(s)	60, 316
Csp6I	GTAC	3 cut(s)	553, 981, 1461
CviAII	CATG	6 cut(s)	271, 472, 493, 1276, 1415, 1464
CviQI	GTAC	3 cut(s)	553, 981, 1461
DdeI	CTNAG	5 cut(s)	65, 672, 1344, 1425, 1454
DpnI	GATC	3 cut(s)	572, 855, 1419
DpnII	GATC	3 cut(s)	570, 853, 1417
EaeI	YGGCCR	1 cut(s)	1262
EagI	CGGCCG	1 cut(s)	1262
Eam1104I	CTCTTC	3 cut(s)	423, 596, 659
EarI	CTCTTC	3 cut(s)	423, 596, 659
EciI	GGCGGA	5 cut(s)	143, 217, 245, 334, 825
Ecl136II	GAGCTC	3 cut(s)	433, 589, 602
EclXI	CGGCCG	1 cut(s)	1262
Eco130I	CCWWGG	1 cut(s)	696
Eco24I	GRGCYC	5 cut(s)	385, 435, 591, 604, 726
Eco47I	GGWCC	1 cut(s)	69
Eco52I	CGGCCG	1 cut(s)	1262
Eco53kI	GAGCTC	3 cut(s)	433, 589, 602
EcoICRI	GAGCTC	3 cut(s)	433, 589, 602
EcoNI	CCTNNNNNAGG	1 cut(s)	700
EcoO109I	RGGNCCY	1 cut(s)	69
EcoRII	CCWGG	2 cut(s)	522, 576
EcoT14I	CCWWGG	1 cut(s)	696
EcoT22I	ATGCAT	3 cut(s)	964, 1111, 1216
EcoT38I	GRGCYC	5 cut(s)	385, 435, 591, 604, 726
ErhI	CCWWGG	1 cut(s)	696
FaeI	CATG	6 cut(s)	274, 475, 496, 1279, 1418, 1467
FalI	AAGNNNNNCTT	1 cut(s)	1437
FaqI	GGGAC	2 cut(s)	2, 346
FatI	CATG	6 cut(s)	270, 471, 492, 1275, 1414, 1463
FauI	CCCGC	3 cut(s)	202, 392, 458
FblI	GTMKAC	1 cut(s)	306
Fnu4HI	GCNGC	4 cut(s)	259, 797, 897, 1320
FokI	GGATG	5 cut(s)	1111, 1115, 1198, 1236, 1403
FriOI	GRGCYC	5 cut(s)	385, 435, 591, 604, 726
Fsp4HI	GCNGC	4 cut(s)	259, 797, 897, 1320
GlaI	GCGC	4 cut(s)	278, 337, 688, 795
GluI	GCNGC	4 cut(s)	259, 797, 897, 1320
HaeII	RGCGCY	1 cut(s)	690
HaeIII	GGCC	8 cut(s)	203, 383, 567, 581, 849, 1150, 1264, 1305
HapII	CCGG	5 cut(s)	839, 1076, 1157, 1265, 1306
HgaI	GACGC	2 cut(s)	60, 316
HhaI	GCGC	4 cut(s)	279, 338, 689, 796
Hin1II	CATG	6 cut(s)	274, 475, 496, 1279, 1418, 1467
Hin6I	GCGC	4 cut(s)	277, 336, 687, 794
HinP1I	GCGC	4 cut(s)	277, 336, 687, 794
HincII	GTYRAC	1 cut(s)	307
HindII	GTYRAC	1 cut(s)	307
HinfI	GANTC	6 cut(s)	308, 359, 467, 488, 712, 1258
HpaII	CCGG	5 cut(s)	839, 1076, 1157, 1265, 1306
HphI	GGTGA	5 cut(s)	154, 227, 235, 712, 934
Hpy166II	GTNNAC	2 cut(s)	307, 640
Hpy188I	TCNGA	4 cut(s)	313, 717, 732, 1257
Hpy188III	TCNNGA	2 cut(s)	439, 1046
Hpy8I	GTNNAC	2 cut(s)	307, 640
Hpy99I	CGWCG	2 cut(s)	54, 308
HpyAV	CCTTC	7 cut(s)	82, 187, 781, 817, 919, 1081, 1231
HpyCH4III	ACNGT	3 cut(s)	509, 935, 1371
HpyCH4IV	ACGT	3 cut(s)	743, 983, 1297
HpyCH4V	TGCA	6 cut(s)	625, 962, 1005, 1109, 1123, 1214
HpyF10VI	GCNNNNNNNGC	3 cut(s)	333, 344, 564
HpyF3I	CTNAG	5 cut(s)	65, 672, 1344, 1425, 1454
HpySE526I	ACGT	3 cut(s)	743, 983, 1297
Hsp92II	CATG	6 cut(s)	274, 475, 496, 1279, 1418, 1467
HspAI	GCGC	4 cut(s)	277, 336, 687, 794
Kzo9I	GATC	3 cut(s)	570, 853, 1417
LguI	GCTCTTC	3 cut(s)	423, 596, 659
LmnI	GCTCC	6 cut(s)	274, 297, 347, 458, 607, 733
Lsp1109I	GCAGC	3 cut(s)	808, 883, 1306
LweI	GCATC	4 cut(s)	306, 1096, 1201, 1347
MaeII	ACGT	3 cut(s)	743, 983, 1297
MaeIII	GTNAC	1 cut(s)	1384
MalI	GATC	3 cut(s)	572, 855, 1419
MbiI	CCGCTC	1 cut(s)	453
MboI	GATC	3 cut(s)	570, 853, 1417
MboII	GAAGA	7 cut(s)	313, 364, 440, 583, 646, 793, 1411
MfeI	CAATTG	2 cut(s)	376, 1439
MhlI	GDGCHC	5 cut(s)	385, 435, 591, 604, 726
MluCI	AATT	4 cut(s)	376, 1324, 1431, 1439
MlyI	GAGTC	4 cut(s)	302, 368, 476, 482
MmeI	TCCRAC	1 cut(s)	336
Mph1103I	ATGCAT	3 cut(s)	964, 1111, 1216
MseI	TTAA	7 cut(s)	12, 512, 615, 831, 957, 1053, 1179
MspA1I	CMGCKG	1 cut(s)	799
MspI	CCGG	5 cut(s)	839, 1076, 1157, 1265, 1306
MspR9I	CCNGG	3 cut(s)	524, 578, 1158
MunI	CAATTG	2 cut(s)	376, 1439
MvaI	CCWGG	2 cut(s)	524, 578
MvnI	CGCG	3 cut(s)	261, 327, 336
MwoI	GCNNNNNNNGC	3 cut(s)	333, 344, 564
NciI	CCSGG	1 cut(s)	1158
NdeII	GATC	3 cut(s)	570, 853, 1417
NlaIII	CATG	6 cut(s)	274, 475, 496, 1279, 1418, 1467
NlaIV	GGNNCC	2 cut(s)	204, 383
NmuCI	GTSAC	1 cut(s)	1384
NsiI	ATGCAT	3 cut(s)	964, 1111, 1216
NspV	TTCGAA	1 cut(s)	1085
PciSI	GCTCTTC	3 cut(s)	423, 596, 659
PcsI	WCGNNNNNNNCGW	4 cut(s)	258, 324, 570, 579
PfeI	GAWTC	2 cut(s)	712, 1258
PflFI	GACNNNGTC	1 cut(s)	317
PflMI	CCANNNNNTGG	1 cut(s)	271
PkrI	GCNGC	4 cut(s)	260, 798, 898, 1321
PleI	GAGTC	4 cut(s)	302, 367, 475, 482
PpsI	GAGTC	4 cut(s)	302, 367, 475, 482
PpuMI	RGGWCCY	1 cut(s)	69
PshBI	ATTAAT	1 cut(s)	1053
PsiI	TTATAA	1 cut(s)	1062
Psp124BI	GAGCTC	3 cut(s)	435, 591, 604
Psp5II	RGGWCCY	1 cut(s)	69
Psp6I	CCWGG	2 cut(s)	522, 576
PspGI	CCWGG	2 cut(s)	522, 576
PspN4I	GGNNCC	2 cut(s)	204, 383
PspOMI	GGGCCC	1 cut(s)	381
PspPI	GGNCC	4 cut(s)	69, 202, 381, 382
PspPPI	RGGWCCY	1 cut(s)	69
PsyI	GACNNNGTC	1 cut(s)	317
PvuII	CAGCTG	1 cut(s)	799
RsaI	GTAC	3 cut(s)	554, 982, 1462
RsaNI	GTAC	3 cut(s)	553, 981, 1461
SacI	GAGCTC	3 cut(s)	435, 591, 604
SalI	GTCGAC	1 cut(s)	305
SapI	GCTCTTC	3 cut(s)	423, 596, 659
SaqAI	TTAA	7 cut(s)	12, 512, 615, 831, 957, 1053, 1179
SatI	GCNGC	4 cut(s)	259, 797, 897, 1320
Sau3AI	GATC	3 cut(s)	570, 853, 1417
Sau96I	GGNCC	4 cut(s)	69, 202, 381, 382
SchI	GAGTC	4 cut(s)	302, 368, 476, 482
ScrFI	CCNGG	3 cut(s)	524, 578, 1158
SduI	GDGCHC	5 cut(s)	385, 435, 591, 604, 726
SfaNI	GCATC	4 cut(s)	306, 1096, 1201, 1347
SfuI	TTCGAA	1 cut(s)	1085
SinI	GGWCC	1 cut(s)	69
Sse9I	AATT	4 cut(s)	376, 1324, 1431, 1439
SstI	GAGCTC	3 cut(s)	435, 591, 604
StyD4I	CCNGG	3 cut(s)	522, 576, 1156
StyI	CCWWGG	1 cut(s)	696
TaaI	ACNGT	3 cut(s)	509, 935, 1371
TaiI	ACGT	3 cut(s)	746, 986, 1300
TaqI	TCGA	7 cut(s)	306, 420, 486, 573, 598, 844, 1085
TasI	AATT	4 cut(s)	376, 1324, 1431, 1439
TauI	GCSGC	1 cut(s)	261
TfiI	GAWTC	2 cut(s)	712, 1258
Tru1I	TTAA	7 cut(s)	12, 512, 615, 831, 957, 1053, 1179
Tru9I	TTAA	7 cut(s)	12, 512, 615, 831, 957, 1053, 1179
TseFI	GTSAC	1 cut(s)	1384
TseI	GCWGC	3 cut(s)	796, 896, 1319
Tsp45I	GTSAC	1 cut(s)	1384
TspDTI	ATGAA	5 cut(s)	259, 509, 529, 800, 1250
TspGWI	ACGGA	2 cut(s)	292, 1403
Tth111I	GACNNNGTC	1 cut(s)	317
Van91I	CCANNNNNTGG	1 cut(s)	271
VpaK11BI	GGWCC	1 cut(s)	69
VspI	ATTAAT	1 cut(s)	1053
XagI	CCTNNNNNAGG	1 cut(s)	700
XmiI	GTMKAC	1 cut(s)	306
Zsp2I	ATGCAT	3 cut(s)	964, 1111, 1216

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.