Rh7AG416900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
55948404 .. 55953656
5253 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG416900.1

Sequence Viewer

Length: 315 bp
ATGGTAGTTAATCAAAGAAGAAATGGTATGGATAGGAACCTACCGGAGTATGGAAAGGAGGAGAGAAGAAAGAATCATCCATTCAGCCGATCAGGCCAAAAGGTTTGGGAAGACAGAGAGTTGATTAATAGATCTGGTGGCAAAGAGCCGTATCACTTTTTGAATGCTATTCGCTGGGATTCCAAGACTTTGCTTCAGTGCTTGCCTACTTCAGTGGATAGAATTCTCAGCATTCCAACTGCTATGACTGGTGGTGGAGCTGATAAATTGATTTGGAAGCATACTTCAAAAGGGAATTCTGTTCCTTCTGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

104

Amino Acids

11.86

Weight (kDa)

10.0

Isoelectric Point (pI)

52.26

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 222, 295
AcuI CTGAAG 2 cut(s) 179, 195
AfiI CCNNNNNNNGG 1 cut(s) 50
AgsI TTSAA 2 cut(s) 163, 288
AluBI AGCT 1 cut(s) 260
AluI AGCT 1 cut(s) 260
AoxI GGCC 1 cut(s) 94
ApoI RAATTY 2 cut(s) 222, 295
AseI ATTAAT 1 cut(s) 126
BbsI GAAGAC 1 cut(s) 117
BceAI ACGGC 1 cut(s) 133
BglI GCCNNNNNGGC 1 cut(s) 93
BglII AGATCT 1 cut(s) 131
BmiI GGNNCC 1 cut(s) 38
BpiI GAAGAC 1 cut(s) 117
BsaWI WCCGGW 1 cut(s) 43
Bsc4I CCNNNNNNNGG 1 cut(s) 50
Bse1I ACTGG 1 cut(s) 253
BseGI GGATG 1 cut(s) 76
BseLI CCNNNNNNNGG 1 cut(s) 50
BseMII CTCAG 1 cut(s) 241
BseNI ACTGG 1 cut(s) 253
BseRI GAGGAG 1 cut(s) 74
BseYI CCCAGC 1 cut(s) 174
BshFI GGCC 1 cut(s) 96
BsiSI CCGG 1 cut(s) 44
BslI CCNNNNNNNGG 1 cut(s) 50
BsmI GAATGC 2 cut(s) 169, 231
BsnI GGCC 1 cut(s) 96
Bsp143I GATC 2 cut(s) 89, 131
BspANI GGCC 1 cut(s) 96
BspCNI CTCAG 1 cut(s) 240
BspLI GGNNCC 1 cut(s) 38
BsrI ACTGG 1 cut(s) 253
BssMI GATC 2 cut(s) 89, 131
BstC8I GCNNGC 1 cut(s) 203
BstDEI CTNAG 1 cut(s) 227
BstF5I GGATG 1 cut(s) 76
BstKTI GATC 2 cut(s) 92, 134
BstMBI GATC 2 cut(s) 89, 131
BstMWI GCNNNNNNNGC 1 cut(s) 93
BstV2I GAAGAC 1 cut(s) 117
BstX2I RGATCY 1 cut(s) 131
BstYI RGATCY 1 cut(s) 131
BsuRI GGCC 1 cut(s) 96
BtsCI GGATG 1 cut(s) 76
BtsIMutI CAGTG 2 cut(s) 203, 219
Cac8I GCNNGC 1 cut(s) 203
CviJI RGCY 4 cut(s) 87, 96, 148, 260
CviKI_1 RGCY 4 cut(s) 87, 96, 148, 260
DdeI CTNAG 1 cut(s) 227
DpnI GATC 2 cut(s) 91, 133
DpnII GATC 2 cut(s) 89, 131
Eco57I CTGAAG 2 cut(s) 179, 195
EcoRI GAATTC 2 cut(s) 222, 295
FaiI YATR 4 cut(s) 29, 51, 245, 282
FokI GGATG 1 cut(s) 63
GsaI CCCAGC 1 cut(s) 178
HaeIII GGCC 1 cut(s) 96
HapII CCGG 1 cut(s) 44
HinfI GANTC 2 cut(s) 73, 179
HpaII CCGG 1 cut(s) 44
HpyAV CCTTC 1 cut(s) 315
HpyF10VI GCNNNNNNNGC 1 cut(s) 93
HpyF3I CTNAG 1 cut(s) 227
Kzo9I GATC 2 cut(s) 89, 131
LmnI GCTCC 1 cut(s) 257
LpnPI CCDG 5 cut(s) 57, 78, 120, 160, 234
MalI GATC 2 cut(s) 91, 133
MboI GATC 2 cut(s) 89, 131
MboII GAAGA 3 cut(s) 30, 78, 122
MflI RGATCY 1 cut(s) 131
MluCI AATT 3 cut(s) 222, 266, 295
MmeI TCCRAC 1 cut(s) 260
MnlI CCTC 1 cut(s) 52
MseI TTAA 3 cut(s) 9, 126, 313
MspI CCGG 1 cut(s) 44
Mva1269I GAATGC 2 cut(s) 169, 231
MwoI GCNNNNNNNGC 1 cut(s) 93
NdeII GATC 2 cut(s) 89, 131
NlaIV GGNNCC 1 cut(s) 38
PctI GAATGC 2 cut(s) 169, 231
PfeI GAWTC 2 cut(s) 73, 179
PshBI ATTAAT 1 cut(s) 126
PspFI CCCAGC 1 cut(s) 174
PspN4I GGNNCC 1 cut(s) 38
PsuI RGATCY 1 cut(s) 131
SaqAI TTAA 3 cut(s) 9, 126, 313
Sau3AI GATC 2 cut(s) 89, 131
SetI ASST 3 cut(s) 42, 105, 262
SgeI CNNG 7 cut(s) 56, 105, 147, 187, 196, 214, 261
Sse9I AATT 3 cut(s) 222, 266, 295
TasI AATT 3 cut(s) 222, 266, 295
TfiI GAWTC 2 cut(s) 73, 179
Tru1I TTAA 3 cut(s) 9, 126, 313
Tru9I TTAA 3 cut(s) 9, 126, 313
TscAI CASTG 2 cut(s) 203, 219
TspRI CASTG 2 cut(s) 203, 219
VspI ATTAAT 1 cut(s) 126
XapI RAATTY 2 cut(s) 222, 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.