Rh7DG411100

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
57787230 .. 57791388
4159 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG411100.1

Sequence Viewer

Length: 258 bp
ATGGTATGGATAGGAACCTACCGGAGTATCGAAAGGAGGAGTGAAGAAAGAATCATCCATTCAGCCGATCAGCTTTGTGTTGATGCATTTGCAGGCCAAAAGGTTTGGGAAGACAGAGAGTTGGTTAATAGATCTGGTGGCAAAGAGCCGTATGAGGTTCATAATAGGAAGTTGCGATACAAAGCTCCTAGAATTGCTGGATTATGCCTGATGAAAAAAGTTGATGCATTGATGAAAGCCATGGAGCGGAGTCTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

85

Amino Acids

9.94

Weight (kDa)

9.51

Isoelectric Point (pI)

49.63

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 247
AciI CCGC 1 cut(s) 247
AfiI CCNNNNNNNGG 1 cut(s) 246
AluBI AGCT 2 cut(s) 73, 185
AluI AGCT 2 cut(s) 73, 185
AoxI GGCC 1 cut(s) 94
BaeI ACNNNNGTAYC 2 cut(s) 10, 43
BarI GAAGNNNNNNTAC 2 cut(s) 161, 193
BbsI GAAGAC 1 cut(s) 117
BceAI ACGGC 1 cut(s) 133
BfaI CTAG 1 cut(s) 189
BglII AGATCT 1 cut(s) 131
BmiI GGNNCC 1 cut(s) 16
BmsI GCATC 2 cut(s) 73, 214
BpiI GAAGAC 1 cut(s) 117
BsaJI CCNNGG 1 cut(s) 240
BsaWI WCCGGW 1 cut(s) 21
Bsc4I CCNNNNNNNGG 1 cut(s) 246
BseDI CCNNGG 1 cut(s) 240
BseGI GGATG 1 cut(s) 54
BseLI CCNNNNNNNGG 1 cut(s) 246
BseRI GAGGAG 1 cut(s) 52
BshFI GGCC 1 cut(s) 96
BsiSI CCGG 1 cut(s) 22
BslI CCNNNNNNNGG 1 cut(s) 246
BsnI GGCC 1 cut(s) 96
Bsp143I GATC 2 cut(s) 67, 131
Bsp19I CCATGG 1 cut(s) 240
BspACI CCGC 1 cut(s) 247
BspANI GGCC 1 cut(s) 96
BspLI GGNNCC 1 cut(s) 16
BsrBI CCGCTC 1 cut(s) 247
BssECI CCNNGG 1 cut(s) 240
BssMI GATC 2 cut(s) 67, 131
BssT1I CCWWGG 1 cut(s) 240
BstC8I GCNNGC 1 cut(s) 94
BstDSI CCRYGG 1 cut(s) 240
BstF5I GGATG 1 cut(s) 54
BstKTI GATC 2 cut(s) 70, 134
BstMBI GATC 2 cut(s) 67, 131
BstV2I GAAGAC 1 cut(s) 117
BstX2I RGATCY 1 cut(s) 131
BstYI RGATCY 1 cut(s) 131
BsuRI GGCC 1 cut(s) 96
BtgI CCRYGG 1 cut(s) 240
BtsCI GGATG 1 cut(s) 54
Cac8I GCNNGC 1 cut(s) 94
CviAII CATG 1 cut(s) 241
CviJI RGCY 6 cut(s) 65, 73, 96, 148, 185, 239
CviKI_1 RGCY 6 cut(s) 65, 73, 96, 148, 185, 239
DpnI GATC 2 cut(s) 69, 133
DpnII GATC 2 cut(s) 67, 131
Eco130I CCWWGG 1 cut(s) 240
EcoT14I CCWWGG 1 cut(s) 240
EcoT22I ATGCAT 2 cut(s) 88, 229
ErhI CCWWGG 1 cut(s) 240
FaeI CATG 1 cut(s) 244
FaiI YATR 6 cut(s) 7, 153, 162, 205, 242, 256
FatI CATG 1 cut(s) 240
FokI GGATG 1 cut(s) 41
FspBI CTAG 1 cut(s) 189
HaeIII GGCC 1 cut(s) 96
HapII CCGG 1 cut(s) 22
Hin1II CATG 1 cut(s) 244
HinfI GANTC 2 cut(s) 51, 250
HpaII CCGG 1 cut(s) 22
HpyCH4V TGCA 3 cut(s) 86, 92, 227
Hsp92II CATG 1 cut(s) 244
Kzo9I GATC 2 cut(s) 67, 131
LmnI GCTCC 2 cut(s) 190, 244
LpnPI CCDG 5 cut(s) 35, 78, 120, 183, 221
LweI GCATC 2 cut(s) 73, 214
MaeI CTAG 1 cut(s) 189
MalI GATC 2 cut(s) 69, 133
MbiI CCGCTC 1 cut(s) 247
MboI GATC 2 cut(s) 67, 131
MboII GAAGA 2 cut(s) 56, 122
MflI RGATCY 1 cut(s) 131
MluCI AATT 1 cut(s) 192
MnlI CCTC 2 cut(s) 30, 148
Mph1103I ATGCAT 2 cut(s) 88, 229
MseI TTAA 1 cut(s) 126
MspI CCGG 1 cut(s) 22
NcoI CCATGG 1 cut(s) 240
NdeII GATC 2 cut(s) 67, 131
NlaIII CATG 1 cut(s) 244
NlaIV GGNNCC 1 cut(s) 16
NsiI ATGCAT 2 cut(s) 88, 229
PfeI GAWTC 1 cut(s) 51
PspN4I GGNNCC 1 cut(s) 16
PsuI RGATCY 1 cut(s) 131
SaqAI TTAA 1 cut(s) 126
Sau3AI GATC 2 cut(s) 67, 131
SetI ASST 5 cut(s) 20, 75, 105, 159, 187
SfaNI GCATC 2 cut(s) 73, 214
SgeI CNNG 7 cut(s) 34, 105, 147, 201, 210, 220, 253
Sse9I AATT 1 cut(s) 192
SsiI CCGC 1 cut(s) 247
SspMI CTAG 1 cut(s) 189
StyI CCWWGG 1 cut(s) 240
TaqI TCGA 1 cut(s) 30
TasI AATT 1 cut(s) 192
TfiI GAWTC 1 cut(s) 51
Tru1I TTAA 1 cut(s) 126
Tru9I TTAA 1 cut(s) 126
TspDTI ATGAA 3 cut(s) 149, 227, 248
XspI CTAG 1 cut(s) 189
Zsp2I ATGCAT 2 cut(s) 88, 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.