Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7A

Orthogroup ID

OG0005891

Physical Location & Seq

Genomic Coordinates Reverse (-)

55953742 .. 55955286

Gene Structure 1545 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7AG417000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1545 bp

ATGATATTTGAAGGTTGTATAGTTTTTCCAAAGAAATGCGACTCCGTATTAGAATTTGGGCCTTTGGGGAACACCACTATGTTCTTGCTTAAAGTCCCACGCTACTCCCTACTAAACTGCGAACAACGACGCGAAAAAATGCTCAGGTCCTTCGCCAAAAGTTCCCTCCACCTCTATCTCCACCAAAACCAAAACCAAAACCCAAAAACCCTCCACCTCCTCCTCCTCCTCCGCCACCTCACCACCCTCAATGCCTTCCCTCCCCAAAACCCCGCCGTGGCCCCCACCAAAGACGACTACTTCTCCGCCATCCACCACATCACCAACATCGTCCGTCGCGACCACTTCATGGAGCGCACCCTCAACAAGCTCCGCATCTCCGTCGACTCCGACCTCGTCTTCCGCGTCCTCCGCGCCTGCTCCGCCTCCGCCACCGAGTCCCTCCGCTTCTTCAATTGGGCCCGCACCCACCACCCCACCTACCGCCCCACCACCCTCGAAACCGAAGAGCTCGTCAAGACCCTCGCCCGCTCCAAAAAATACGAGTCCATGTGGAAAATCCTCGACTCCATGAAAACCCACCACGGTTTAACACTCTCCCAGGACACCCTTTGCTTCATTATCCAAGAGTACGGCAAGCACGGCCTGATCGACCAGGCTGTTGAGCTCTTCAATCGAGCTCCCAAGACCTTTAACTGCTTGCAGTCGGTGGAAGTTCACAACGCTCTGCTCTTCTCTCTCTGCCAGACTAAGCTCTTTCACGGCGCTTATGCCTTGGTGAGGAGGCTGATTCGGAAAGGGCTCGTTCCGAATAAGATGACGTATTCCATTTTGGTCAATGCTTGGTGTTCTAATGGGAAGATGAAGGAGGCGCAGCTGTTCTTGGAGGAGATGAGTGAGAAGGGGTTTCATCCGCCGGTTCGAGGCCGTGATCTGCTGGTTGAGGGGTTGCTGAATGCTGGTTATATTGAGGCTGCCAAAGATATGGTAAGGAAAATGGTGAAGGAAAACTGTGTGCCTGATGTTTCTACTTTTAATGCATTGTTAGAAGCTATTTGTAAGTCTGGGGAGGTTGAGTTTTGCATTGGTCTTTATTGGGAGGCAACTGGATTGGGGCTTTGTCCTGATATTAATACTTATAAAGTGTTGATACCGGCGGTTTCGAAGGTTGGGAGGATGGATGATGCATTTAGGCTTTTGCATAATGCGATTGAGGACGGGCACAGGCCGTTTCCGGGCTTGTATGCCCCTATTGTTAAGGGGATGTGTAGGAATGGTCAGTTTGATGATGCATTTTGTTTCTTTAGTGAGATGAAGGTCAAGGGTCATCCTCCGAATCGGCCGGTATATACCATGTTGATAACTATGGCTGGACGTGGAGGCCGGTTTGTTGAGGCTGCGAATTACTTGATGGAGATGACTGAGTTGGGGTTGATGCCGATTTCACGGTGCTTTGATTTGGTCACGGATGGATTGAAGAATAGTGGGAAGCATGATCTGGCTAAGAGAATTGAGCAATTGGAAGTTTCTCTTAGGGGTACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090615 GO:0090617 GO:0097159 GO:0140053 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

514

Amino Acids

58.5

Weight (kDa)

9.01

Isoelectric Point (pI)

40.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	239 - 283	1.5e-06	PPR repeat family
TPR_24	PF23276	264 - 366	3.6e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	266 - 299	1.4e-10	PPR repeat
PPR	PF01535	274 - 303	8.5e-06	PPR repeat
PPR_2	PF13041	313 - 354	9.2e-08	PPR repeat family
PPR_2	PF13041	340 - 387	7.8e-07	PPR repeat family
PPR_2	PF13041	418 - 455	3.4e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18390
fragaria_vesca	FvH4_4g11972
malus_domestica	MD04G1235400.v1.1
prunus_persica	Prupe.6G355300_v2.0.a1
pyrus_communis	pycom04g20890
rosa_chinensis	RchiOBHm_Chr7g0230951
rosa_laevigata	RLG00000001439 RLG00000002174 RLG00000002176
rosa_multiflora	Rmu_sc0000453.1_g000016 Rmu_sc0000453.1_g000017 Rmu_sc0002014.1_g000047
rosa_roxburghii	Rroxscaffold_3G00229640 Rroxscaffold_3G00238690 Rroxscaffold_3G00238710 Rroxscaffold_3G00238720 Rroxscaffold_3G00238730
rosa_rugosa	Rorug07G0263500
rosa_samantha	Rh7AG416900 Rh7AG417000 Rh7BG392800 Rh7BG392900 Rh7CG436000 Rh7CG436100 Rh7DG411100 Rh7DG411200
rosa_wichuraiana	Rw1G007620 Rw7G034520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1140
AccB7I	CCANNNNNTGG	1 cut(s)	349
AccBSI	CCGCTC	1 cut(s)	531
AccI	GTMKAC	1 cut(s)	384
AccII	CGCG	4 cut(s)	132, 339, 405, 414
AcoI	YGGCCR	1 cut(s)	1340
AcsI	RAATTY	1 cut(s)	53
AfaI	GTAC	2 cut(s)	632, 1540
AfiI	CCNNNNNNNGG	5 cut(s)	277, 349, 780, 923, 1235
AgsI	TTSAA	4 cut(s)	11, 454, 673, 1477
AjiI	CACGTC	1 cut(s)	1376
AjnI	CCWGG	2 cut(s)	600, 654
AluBI	AGCT	7 cut(s)	370, 511, 667, 680, 754, 877, 1052
AluI	AGCT	7 cut(s)	370, 511, 667, 680, 754, 877, 1052
Alw21I	GWGCWC	3 cut(s)	513, 669, 682
AoxI	GGCC	8 cut(s)	59, 279, 459, 643, 925, 1226, 1340, 1381
ApaI	GGGCCC	1 cut(s)	463
ApeKI	GCWGC	3 cut(s)	874, 974, 1397
ApoI	RAATTY	1 cut(s)	53
ArsI	GACNNNNNNTTYG	2 cut(s)	498, 530
AseI	ATTAAT	1 cut(s)	1131
AspLEI	GCGC	4 cut(s)	357, 416, 767, 874
AspS9I	GGNCC	5 cut(s)	59, 147, 280, 459, 460
AsuC2I	CCSGG	1 cut(s)	1236
AsuHPI	GGTGA	4 cut(s)	232, 313, 790, 1012
AsuII	TTCGAA	1 cut(s)	1163
AvaII	GGWCC	1 cut(s)	147
BaeGI	GKGCMC	2 cut(s)	463, 1224
BanII	GRGCYC	5 cut(s)	463, 513, 669, 682, 804
BbsI	GAAGAC	1 cut(s)	391
Bbv12I	GWGCWC	3 cut(s)	513, 669, 682
BbvI	GCAGC	3 cut(s)	886, 961, 1384
BccI	CCATC	4 cut(s)	317, 1171, 1405, 1463
BceAI	ACGGC	6 cut(s)	260, 649, 658, 778, 912, 1213
BcgI	CGANNNNNNTGC	2 cut(s)	364, 398
BciT130I	CCWGG	2 cut(s)	602, 656
BcnI	CCSGG	1 cut(s)	1236
BfoI	RGCGCY	1 cut(s)	768
BisI	GCNGC	3 cut(s)	875, 975, 1398
BlsI	GCNGC	3 cut(s)	876, 976, 1399
Bme1390I	CCNGG	3 cut(s)	602, 656, 1236
Bme18I	GGWCC	1 cut(s)	147
BmgBI	CACGTC	1 cut(s)	1376
BmgT120I	GGNCC	5 cut(s)	59, 147, 280, 459, 460
BmiI	GGNNCC	2 cut(s)	282, 461
BmrFI	CCNGG	3 cut(s)	602, 656, 1236
BmsI	GCATC	4 cut(s)	384, 1174, 1279, 1425
BpiI	GAAGAC	1 cut(s)	391
Bpu10I	CCTNAGC	1 cut(s)	143
Bpu14I	TTCGAA	1 cut(s)	1163
BpuMI	CCSGG	1 cut(s)	1236
BsaJI	CCNNGG	4 cut(s)	276, 583, 600, 774
BsaXI	ACNNNNNCTCC	4 cut(s)	287, 317, 1061, 1091
Bsc4I	CCNNNNNNNGG	5 cut(s)	277, 349, 780, 923, 1235
Bse118I	RCCGGY	4 cut(s)	916, 1153, 1342, 1383
Bse1I	ACTGG	1 cut(s)	1111
BseBI	CCWGG	2 cut(s)	602, 656
BseDI	CCNNGG	4 cut(s)	276, 583, 600, 774
BseGI	GGATG	7 cut(s)	309, 910, 1182, 1186, 1269, 1327, 1474
BseLI	CCNNNNNNNGG	5 cut(s)	277, 349, 780, 923, 1235
BseMII	CTCAG	2 cut(s)	157, 1413
BseNI	ACTGG	1 cut(s)	1111
BseRI	GAGGAG	6 cut(s)	209, 212, 215, 218, 796, 902
BseSI	GKGCMC	2 cut(s)	463, 1224
BseX3I	CGGCCG	1 cut(s)	1340
BseXI	GCAGC	3 cut(s)	886, 961, 1384
Bsh1236I	CGCG	4 cut(s)	132, 339, 405, 414
Bsh1285I	CGRYCG	1 cut(s)	1343
BshFI	GGCC	8 cut(s)	61, 281, 461, 645, 927, 1228, 1342, 1383
BsiEI	CGRYCG	1 cut(s)	1343
BsiHKAI	GWGCWC	3 cut(s)	513, 669, 682
BsiSI	CCGG	5 cut(s)	917, 1154, 1235, 1343, 1384
BslFI	GGGAC	2 cut(s)	80, 424
BslI	CCNNNNNNNGG	5 cut(s)	277, 349, 780, 923, 1235
BsmFI	GGGAC	2 cut(s)	80, 424
BsmI	GAATGC	1 cut(s)	961
BsnI	GGCC	8 cut(s)	61, 281, 461, 645, 927, 1228, 1342, 1383
Bsp119I	TTCGAA	1 cut(s)	1163
Bsp120I	GGGCCC	1 cut(s)	459
Bsp1286I	GDGCHC	6 cut(s)	463, 513, 669, 682, 804, 1224
Bsp143I	GATC	3 cut(s)	648, 931, 1495
Bsp68I	TCGCGA	1 cut(s)	339
BspANI	GGCC	8 cut(s)	61, 281, 461, 645, 927, 1228, 1342, 1383
BspCNI	CTCAG	2 cut(s)	156, 1414
BspFNI	CGCG	4 cut(s)	132, 339, 405, 414
BspLI	GGNNCC	2 cut(s)	282, 461
BspQI	GCTCTTC	3 cut(s)	501, 674, 737
BspT104I	TTCGAA	1 cut(s)	1163
BsrBI	CCGCTC	1 cut(s)	531
BsrFI	RCCGGY	4 cut(s)	916, 1153, 1342, 1383
BsrI	ACTGG	1 cut(s)	1111
BssAI	RCCGGY	4 cut(s)	916, 1153, 1342, 1383
BssECI	CCNNGG	4 cut(s)	276, 583, 600, 774
BssMI	GATC	3 cut(s)	648, 931, 1495
BssT1I	CCWWGG	1 cut(s)	774
Bst2UI	CCWGG	2 cut(s)	602, 656
Bst4CI	ACNGT	3 cut(s)	587, 1013, 1449
Bst6I	CTCTTC	3 cut(s)	501, 674, 737
BstBI	TTCGAA	1 cut(s)	1163
BstC8I	GCNNGC	5 cut(s)	418, 463, 529, 638, 701
BstDEI	CTNAG	5 cut(s)	143, 750, 1422, 1503, 1532
BstDSI	CCRYGG	2 cut(s)	276, 583
BstENI	CCTNNNNNAGG	1 cut(s)	778
BstF5I	GGATG	7 cut(s)	309, 910, 1182, 1186, 1269, 1327, 1474
BstFNI	CGCG	4 cut(s)	132, 339, 405, 414
BstH2I	RGCGCY	1 cut(s)	768
BstHHI	GCGC	4 cut(s)	357, 416, 767, 874
BstKTI	GATC	3 cut(s)	651, 934, 1498
BstMBI	GATC	3 cut(s)	648, 931, 1495
BstMCI	CGRYCG	1 cut(s)	1343
BstMWI	GCNNNNNNNGC	3 cut(s)	411, 422, 642
BstNI	CCWGG	2 cut(s)	602, 656
BstSCI	CCNGG	3 cut(s)	600, 654, 1234
BstSLI	GKGCMC	2 cut(s)	463, 1224
BstUI	CGCG	4 cut(s)	132, 339, 405, 414
BstV1I	GCAGC	3 cut(s)	886, 961, 1384
BstV2I	GAAGAC	1 cut(s)	391
BstXI	CCANNNNNNTGG	1 cut(s)	985
BstZI	CGGCCG	1 cut(s)	1340
BsuRI	GGCC	8 cut(s)	61, 281, 461, 645, 927, 1228, 1342, 1383
BtgI	CCRYGG	2 cut(s)	276, 583
BtrI	CACGTC	1 cut(s)	1376
BtsCI	GGATG	7 cut(s)	309, 910, 1182, 1186, 1269, 1327, 1474
BtuMI	TCGCGA	1 cut(s)	339
Cac8I	GCNNGC	5 cut(s)	418, 463, 529, 638, 701
CfoI	GCGC	4 cut(s)	357, 416, 767, 874
Cfr10I	RCCGGY	4 cut(s)	916, 1153, 1342, 1383
Cfr13I	GGNCC	5 cut(s)	59, 147, 280, 459, 460
CseI	GACGC	2 cut(s)	138, 394
Csp6I	GTAC	2 cut(s)	631, 1539
CviAII	CATG	6 cut(s)	349, 550, 571, 1354, 1493, 1542
CviQI	GTAC	2 cut(s)	631, 1539
DdeI	CTNAG	5 cut(s)	143, 750, 1422, 1503, 1532
DpnI	GATC	3 cut(s)	650, 933, 1497
DpnII	GATC	3 cut(s)	648, 931, 1495
EaeI	YGGCCR	1 cut(s)	1340
EagI	CGGCCG	1 cut(s)	1340
Eam1104I	CTCTTC	3 cut(s)	501, 674, 737
EarI	CTCTTC	3 cut(s)	501, 674, 737
EciI	GGCGGA	5 cut(s)	221, 295, 412, 418, 903
Ecl136II	GAGCTC	3 cut(s)	511, 667, 680
EclXI	CGGCCG	1 cut(s)	1340
Eco130I	CCWWGG	1 cut(s)	774
Eco24I	GRGCYC	5 cut(s)	463, 513, 669, 682, 804
Eco47I	GGWCC	1 cut(s)	147
Eco52I	CGGCCG	1 cut(s)	1340
Eco53kI	GAGCTC	3 cut(s)	511, 667, 680
EcoICRI	GAGCTC	3 cut(s)	511, 667, 680
EcoNI	CCTNNNNNAGG	1 cut(s)	778
EcoO109I	RGGNCCY	1 cut(s)	147
EcoRII	CCWGG	2 cut(s)	600, 654
EcoT14I	CCWWGG	1 cut(s)	774
EcoT22I	ATGCAT	3 cut(s)	1042, 1189, 1294
EcoT38I	GRGCYC	5 cut(s)	463, 513, 669, 682, 804
ErhI	CCWWGG	1 cut(s)	774
FaeI	CATG	6 cut(s)	352, 553, 574, 1357, 1496, 1545
FalI	AAGNNNNNCTT	1 cut(s)	1515
FaqI	GGGAC	2 cut(s)	80, 424
FatI	CATG	6 cut(s)	348, 549, 570, 1353, 1492, 1541
FauI	CCCGC	3 cut(s)	280, 470, 536
FblI	GTMKAC	1 cut(s)	384
Fnu4HI	GCNGC	3 cut(s)	875, 975, 1398
FokI	GGATG	7 cut(s)	296, 897, 1189, 1193, 1276, 1314, 1481
FriOI	GRGCYC	5 cut(s)	463, 513, 669, 682, 804
Fsp4HI	GCNGC	3 cut(s)	875, 975, 1398
GlaI	GCGC	4 cut(s)	356, 415, 766, 873
GluI	GCNGC	3 cut(s)	875, 975, 1398
HaeII	RGCGCY	1 cut(s)	768
HaeIII	GGCC	8 cut(s)	61, 281, 461, 645, 927, 1228, 1342, 1383
HapII	CCGG	5 cut(s)	917, 1154, 1235, 1343, 1384
HgaI	GACGC	2 cut(s)	138, 394
HhaI	GCGC	4 cut(s)	357, 416, 767, 874
Hin1II	CATG	6 cut(s)	352, 553, 574, 1357, 1496, 1545
Hin6I	GCGC	4 cut(s)	355, 414, 765, 872
HinP1I	GCGC	4 cut(s)	355, 414, 765, 872
HincII	GTYRAC	1 cut(s)	385
HindII	GTYRAC	1 cut(s)	385
HinfI	GANTC	7 cut(s)	41, 386, 437, 545, 566, 790, 1336
HpaII	CCGG	5 cut(s)	917, 1154, 1235, 1343, 1384
HphI	GGTGA	4 cut(s)	232, 313, 790, 1012
Hpy166II	GTNNAC	2 cut(s)	385, 718
Hpy188I	TCNGA	4 cut(s)	391, 795, 810, 1335
Hpy188III	TCNNGA	3 cut(s)	338, 517, 1124
Hpy8I	GTNNAC	2 cut(s)	385, 718
Hpy99I	CGWCG	3 cut(s)	132, 339, 386
HpyAV	CCTTC	8 cut(s)	5, 160, 265, 859, 895, 997, 1159, 1309
HpyCH4III	ACNGT	3 cut(s)	587, 1013, 1449
HpyCH4IV	ACGT	2 cut(s)	821, 1375
HpyCH4V	TGCA	6 cut(s)	703, 1040, 1083, 1187, 1201, 1292
HpyF10VI	GCNNNNNNNGC	3 cut(s)	411, 422, 642
HpyF3I	CTNAG	5 cut(s)	143, 750, 1422, 1503, 1532
HpySE526I	ACGT	2 cut(s)	821, 1375
Hsp92II	CATG	6 cut(s)	352, 553, 574, 1357, 1496, 1545
HspAI	GCGC	4 cut(s)	355, 414, 765, 872
Kzo9I	GATC	3 cut(s)	648, 931, 1495
LguI	GCTCTTC	3 cut(s)	501, 674, 737
LmnI	GCTCC	5 cut(s)	352, 375, 425, 536, 685
Lsp1109I	GCAGC	3 cut(s)	886, 961, 1384
LweI	GCATC	4 cut(s)	384, 1174, 1279, 1425
MaeII	ACGT	2 cut(s)	821, 1375
MaeIII	GTNAC	1 cut(s)	1462
MalI	GATC	3 cut(s)	650, 933, 1497
MbiI	CCGCTC	1 cut(s)	531
MboI	GATC	3 cut(s)	648, 931, 1495
MboII	GAAGA	7 cut(s)	391, 442, 518, 661, 724, 871, 1489
MfeI	CAATTG	2 cut(s)	454, 1517
MhlI	GDGCHC	6 cut(s)	463, 513, 669, 682, 804, 1224
MluCI	AATT	5 cut(s)	53, 454, 1402, 1509, 1517
MlyI	GAGTC	5 cut(s)	35, 380, 446, 554, 560
MmeI	TCCRAC	1 cut(s)	414
Mph1103I	ATGCAT	3 cut(s)	1042, 1189, 1294
MseI	TTAA	6 cut(s)	90, 590, 693, 1035, 1131, 1257
MslI	CAYNNNNRTG	1 cut(s)	77
MspA1I	CMGCKG	1 cut(s)	877
MspI	CCGG	5 cut(s)	917, 1154, 1235, 1343, 1384
MspR9I	CCNGG	3 cut(s)	602, 656, 1236
MunI	CAATTG	2 cut(s)	454, 1517
Mva1269I	GAATGC	1 cut(s)	961
MvaI	CCWGG	2 cut(s)	602, 656
MvnI	CGCG	4 cut(s)	132, 339, 405, 414
MwoI	GCNNNNNNNGC	3 cut(s)	411, 422, 642
NciI	CCSGG	1 cut(s)	1236
NdeII	GATC	3 cut(s)	648, 931, 1495
NlaIII	CATG	6 cut(s)	352, 553, 574, 1357, 1496, 1545
NlaIV	GGNNCC	2 cut(s)	282, 461
NmuCI	GTSAC	1 cut(s)	1462
NruI	TCGCGA	1 cut(s)	339
NsiI	ATGCAT	3 cut(s)	1042, 1189, 1294
NspV	TTCGAA	1 cut(s)	1163
PciSI	GCTCTTC	3 cut(s)	501, 674, 737
PcsI	WCGNNNNNNNCGW	3 cut(s)	336, 402, 648
PctI	GAATGC	1 cut(s)	961
PfeI	GAWTC	2 cut(s)	790, 1336
PflFI	GACNNNGTC	1 cut(s)	395
PflMI	CCANNNNNTGG	1 cut(s)	349
PkrI	GCNGC	3 cut(s)	876, 976, 1399
PleI	GAGTC	5 cut(s)	35, 380, 445, 553, 560
PpsI	GAGTC	5 cut(s)	35, 380, 445, 553, 560
PpuMI	RGGWCCY	1 cut(s)	147
PshBI	ATTAAT	1 cut(s)	1131
PsiI	TTATAA	1 cut(s)	1140
Psp124BI	GAGCTC	3 cut(s)	513, 669, 682
Psp5II	RGGWCCY	1 cut(s)	147
Psp6I	CCWGG	2 cut(s)	600, 654
PspGI	CCWGG	2 cut(s)	600, 654
PspN4I	GGNNCC	2 cut(s)	282, 461
PspOMI	GGGCCC	1 cut(s)	459
PspPI	GGNCC	5 cut(s)	59, 147, 280, 459, 460
PspPPI	RGGWCCY	1 cut(s)	147
PsyI	GACNNNGTC	1 cut(s)	395
PvuII	CAGCTG	1 cut(s)	877
RruI	TCGCGA	1 cut(s)	339
RsaI	GTAC	2 cut(s)	632, 1540
RsaNI	GTAC	2 cut(s)	631, 1539
RseI	CAYNNNNRTG	1 cut(s)	77
SacI	GAGCTC	3 cut(s)	513, 669, 682
SalI	GTCGAC	1 cut(s)	383
SapI	GCTCTTC	3 cut(s)	501, 674, 737
SaqAI	TTAA	6 cut(s)	90, 590, 693, 1035, 1131, 1257
SatI	GCNGC	3 cut(s)	875, 975, 1398
Sau3AI	GATC	3 cut(s)	648, 931, 1495
Sau96I	GGNCC	5 cut(s)	59, 147, 280, 459, 460
SchI	GAGTC	5 cut(s)	35, 380, 446, 554, 560
ScrFI	CCNGG	3 cut(s)	602, 656, 1236
SduI	GDGCHC	6 cut(s)	463, 513, 669, 682, 804, 1224
SfaNI	GCATC	4 cut(s)	384, 1174, 1279, 1425
SfuI	TTCGAA	1 cut(s)	1163
SinI	GGWCC	1 cut(s)	147
SmiMI	CAYNNNNRTG	1 cut(s)	77
Sse9I	AATT	5 cut(s)	53, 454, 1402, 1509, 1517
SstI	GAGCTC	3 cut(s)	513, 669, 682
StyD4I	CCNGG	3 cut(s)	600, 654, 1234
StyI	CCWWGG	1 cut(s)	774
TaaI	ACNGT	3 cut(s)	587, 1013, 1449
TaiI	ACGT	2 cut(s)	824, 1378
TaqI	TCGA	7 cut(s)	384, 498, 564, 651, 676, 922, 1163
TasI	AATT	5 cut(s)	53, 454, 1402, 1509, 1517
TfiI	GAWTC	2 cut(s)	790, 1336
Tru1I	TTAA	6 cut(s)	90, 590, 693, 1035, 1131, 1257
Tru9I	TTAA	6 cut(s)	90, 590, 693, 1035, 1131, 1257
TseFI	GTSAC	1 cut(s)	1462
TseI	GCWGC	3 cut(s)	874, 974, 1397
Tsp45I	GTSAC	1 cut(s)	1462
TspDTI	ATGAA	6 cut(s)	337, 587, 607, 878, 899, 1328
TspGWI	ACGGA	4 cut(s)	34, 323, 370, 1481
Tth111I	GACNNNGTC	1 cut(s)	395
Van91I	CCANNNNNTGG	1 cut(s)	349
VpaK11BI	GGWCC	1 cut(s)	147
VspI	ATTAAT	1 cut(s)	1131
XagI	CCTNNNNNAGG	1 cut(s)	778
XapI	RAATTY	1 cut(s)	53
XmiI	GTMKAC	1 cut(s)	384
Zsp2I	ATGCAT	3 cut(s)	1042, 1189, 1294

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.