Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7B

Orthogroup ID

OG0005891

Physical Location & Seq

Genomic Coordinates Reverse (-)

43299052 .. 43306429

Gene Structure 7378 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG392900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1398 bp

ATGCTCAGGTCCTTCGCCAAAAGTTCCATCCACCTCTATCTCCACCAAAACCAAAACCCAAAAACCCTCCACCTCCTCCTCCTCCGCCACCTCACCACCCTCAATGCCTTCCCTCCCCAAAACCCCGCCGTGGCCCCCACCAAAGACGACTACTTCTCCGCCATCCACCACATCACCAACATCGTCCGCCGCGACCACTTCATGGAGCGCACCCTCAACAAGCTCCGCATCGCCGTCGACTCCGACCTCGTCTTCCGCGTCCTCCGCGCCTGCTCCGCCTCCGCCACCGAGTCCCTCCGCTTCTTCAATTGGGCCCGCACCCACCACCCCACCTACTGCCCCACCACCCTCGAAACCGAAGAGCTCGTCAAGACCCTCGCCCACTCCAAAAAATACGAGTCCATGTGGAAAATCCTCGACTCCATGAAAACCCACCACGGTTTAACACTCTCCCAGGACACCCTTTGCTTCATTATCCAAGAGTACGGCAAGCACGGCCTAATCGACCAGGCCGTTGAGCTCTTCAATCGGGCTCCCAAGACCTTTAACTGCTTGCAGTCGGTGGAAGTTCACAACGCTCTGCTCTTCTCTCTCTGCCAGACTAAGCTCTTTCACGGCGCTTATGCCTTGGTGAGGAGGCTGATTCGAAAAGGGCTCATTCCGAATAAGATGACGTATTCCATTTTGGTCAATGCTTGGTGTTCTAATGGGAAGATGAAGGAGGCGCAGCTGTTCTTGGAGGAGATGAGTGAGAAGGGGTTTAATCCGCCGGTTCGAGGCCGTGATCTGTTGGTTGAGGGGTTGCTCAATGCTGGTTATATTGAGGCTGCCAAAGATATGGTAAGGAAAATGGTGAAGGAAAACTGTGTACCTGATGTTTCTACTTTTAATGCATTGCTAGAAGCTATTTGTAAGTCTGGGGAGGTTGAGTTTTGCATTGGTCTTTATTGGGAGTCAACTGGATTGGGGCTTTGTCCTGATATTAATACTTATAAGGTGTTGATACCGGCGGTTTCGAAGGTTGGGAGGATGGATGATGCGTTTAGGCTTTTGCATGATGCGATTGAGGACGGGCATAGGCCGTTTCCGGGCTTGTATGCCCCTATTGTTAAGGGGATGTGTAGGAATGGTCAGTTTGATGATGCATTTTGTTTCTTTAGTGAAATGAAGGTCAAGGGTCATCCCCCGAATCGGCCGGTATATACTATGTTGATAACTATGGCTGCACGTGGAGGCCGGTTTGTTGAGGCTGCGAATTACTTGATGGAGATGACTGAGTTGGGGTTGATGCCGATTTCACGGTGCTTTGATTTGGTCACGGATGGATTGAAGAATAGTGGGAAGCATGATCTGGCTAAGAGAATTGAGCAATTGGAAGTTTCTCTTAGGGGTACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090615 GO:0090617 GO:0097159 GO:0140053 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

465

Amino Acids

52.74

Weight (kDa)

8.76

Isoelectric Point (pI)

39.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	190 - 234	2.1e-06	PPR repeat family
PPR_1	PF12854	217 - 250	5.1e-10	PPR repeat
TPR_24	PF23276	218 - 316	4.9e-08	Fungal tetratrico peptide repeats
PPR	PF01535	225 - 254	7.5e-06	PPR repeat
PPR_2	PF13041	264 - 305	8e-08	PPR repeat family
PPR_2	PF13041	291 - 338	3.1e-06	PPR repeat family
PPR_2	PF13041	369 - 408	1.9e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18390
fragaria_vesca	FvH4_4g11972
malus_domestica	MD04G1235400.v1.1
prunus_persica	Prupe.6G355300_v2.0.a1
pyrus_communis	pycom04g20890
rosa_chinensis	RchiOBHm_Chr7g0230951
rosa_laevigata	RLG00000001439 RLG00000002174 RLG00000002176
rosa_multiflora	Rmu_sc0000453.1_g000016 Rmu_sc0000453.1_g000017 Rmu_sc0002014.1_g000047
rosa_roxburghii	Rroxscaffold_3G00229640 Rroxscaffold_3G00238690 Rroxscaffold_3G00238710 Rroxscaffold_3G00238720 Rroxscaffold_3G00238730
rosa_rugosa	Rorug07G0263500
rosa_samantha	Rh7AG416900 Rh7AG417000 Rh7BG392800 Rh7BG392900 Rh7CG436000 Rh7CG436100 Rh7DG411100 Rh7DG411200
rosa_wichuraiana	Rw1G007620 Rw7G034520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	993
AccB7I	CCANNNNNTGG	1 cut(s)	202
AccI	GTMKAC	1 cut(s)	237
AccII	CGCG	3 cut(s)	192, 258, 267
AcoI	YGGCCR	1 cut(s)	1193
AcvI	CACGTG	1 cut(s)	1229
AfaI	GTAC	3 cut(s)	485, 870, 1393
AfiI	CCNNNNNNNGG	6 cut(s)	130, 202, 633, 776, 1088, 1191
AgsI	TTSAA	3 cut(s)	307, 526, 1330
AjnI	CCWGG	2 cut(s)	453, 507
AluBI	AGCT	6 cut(s)	223, 364, 520, 607, 730, 905
AluI	AGCT	6 cut(s)	223, 364, 520, 607, 730, 905
Alw21I	GWGCWC	2 cut(s)	366, 522
AoxI	GGCC	8 cut(s)	132, 312, 496, 510, 778, 1079, 1193, 1234
ApaI	GGGCCC	1 cut(s)	316
ApeKI	GCWGC	4 cut(s)	727, 827, 1223, 1250
ArsI	GACNNNNNNTTYG	2 cut(s)	351, 383
AseI	ATTAAT	1 cut(s)	984
AspLEI	GCGC	4 cut(s)	210, 269, 620, 727
AspS9I	GGNCC	4 cut(s)	9, 133, 312, 313
AsuC2I	CCSGG	1 cut(s)	1089
AsuHPI	GGTGA	4 cut(s)	85, 166, 643, 865
AsuII	TTCGAA	2 cut(s)	646, 1016
AvaII	GGWCC	1 cut(s)	9
BaeGI	GKGCMC	1 cut(s)	316
BanII	GRGCYC	5 cut(s)	316, 366, 522, 535, 657
BbrPI	CACGTG	1 cut(s)	1229
BbsI	GAAGAC	1 cut(s)	244
Bbv12I	GWGCWC	2 cut(s)	366, 522
BbvI	GCAGC	4 cut(s)	739, 814, 1210, 1237
BccI	CCATC	5 cut(s)	35, 170, 1024, 1258, 1316
BceAI	ACGGC	8 cut(s)	113, 218, 497, 502, 511, 631, 765, 1066
BcgI	CGANNNNNNTGC	2 cut(s)	217, 251
BciT130I	CCWGG	2 cut(s)	455, 509
BcnI	CCSGG	1 cut(s)	1089
BfaI	CTAG	1 cut(s)	899
BfoI	RGCGCY	1 cut(s)	621
BisI	GCNGC	5 cut(s)	190, 728, 828, 1224, 1251
BlsI	GCNGC	5 cut(s)	191, 729, 829, 1225, 1252
Bme1390I	CCNGG	3 cut(s)	455, 509, 1089
Bme18I	GGWCC	1 cut(s)	9
BmgT120I	GGNCC	4 cut(s)	9, 133, 312, 313
BmiI	GGNNCC	3 cut(s)	135, 314, 534
BmrFI	CCNGG	3 cut(s)	455, 509, 1089
BmsI	GCATC	5 cut(s)	237, 1027, 1048, 1132, 1278
BpiI	GAAGAC	1 cut(s)	244
Bpu10I	CCTNAGC	1 cut(s)	5
Bpu14I	TTCGAA	2 cut(s)	646, 1016
BpuMI	CCSGG	1 cut(s)	1089
BsaAI	YACGTR	1 cut(s)	1229
BsaJI	CCNNGG	4 cut(s)	129, 436, 453, 627
BsaXI	ACNNNNNCTCC	4 cut(s)	140, 170, 914, 944
Bsc4I	CCNNNNNNNGG	6 cut(s)	130, 202, 633, 776, 1088, 1191
Bse118I	RCCGGY	4 cut(s)	769, 1006, 1195, 1236
Bse1I	ACTGG	1 cut(s)	964
Bse3DI	GCAATG	1 cut(s)	893
BseBI	CCWGG	2 cut(s)	455, 509
BseDI	CCNNGG	4 cut(s)	129, 436, 453, 627
BseGI	GGATG	7 cut(s)	27, 162, 1035, 1039, 1122, 1180, 1327
BseLI	CCNNNNNNNGG	6 cut(s)	130, 202, 633, 776, 1088, 1191
BseMI	GCAATG	1 cut(s)	893
BseMII	CTCAG	2 cut(s)	19, 1266
BseNI	ACTGG	1 cut(s)	964
BseRI	GAGGAG	5 cut(s)	65, 68, 71, 649, 755
BseSI	GKGCMC	1 cut(s)	316
BseX3I	CGGCCG	1 cut(s)	1193
BseXI	GCAGC	4 cut(s)	739, 814, 1210, 1237
BsgI	GTGCAG	1 cut(s)	1209
Bsh1236I	CGCG	3 cut(s)	192, 258, 267
Bsh1285I	CGRYCG	1 cut(s)	1196
BshFI	GGCC	8 cut(s)	134, 314, 498, 512, 780, 1081, 1195, 1236
BsiEI	CGRYCG	1 cut(s)	1196
BsiHKAI	GWGCWC	2 cut(s)	366, 522
BsiSI	CCGG	5 cut(s)	770, 1007, 1088, 1196, 1237
BslFI	GGGAC	1 cut(s)	277
BslI	CCNNNNNNNGG	6 cut(s)	130, 202, 633, 776, 1088, 1191
BsmFI	GGGAC	1 cut(s)	277
BsnI	GGCC	8 cut(s)	134, 314, 498, 512, 780, 1081, 1195, 1236
Bsp119I	TTCGAA	2 cut(s)	646, 1016
Bsp120I	GGGCCC	1 cut(s)	312
Bsp1286I	GDGCHC	5 cut(s)	316, 366, 522, 535, 657
Bsp143I	GATC	2 cut(s)	784, 1348
BspANI	GGCC	8 cut(s)	134, 314, 498, 512, 780, 1081, 1195, 1236
BspCNI	CTCAG	2 cut(s)	18, 1267
BspFNI	CGCG	3 cut(s)	192, 258, 267
BspLI	GGNNCC	3 cut(s)	135, 314, 534
BspQI	GCTCTTC	3 cut(s)	354, 527, 590
BspT104I	TTCGAA	2 cut(s)	646, 1016
BsrDI	GCAATG	1 cut(s)	893
BsrFI	RCCGGY	4 cut(s)	769, 1006, 1195, 1236
BsrI	ACTGG	1 cut(s)	964
BssAI	RCCGGY	4 cut(s)	769, 1006, 1195, 1236
BssECI	CCNNGG	4 cut(s)	129, 436, 453, 627
BssMI	GATC	2 cut(s)	784, 1348
BssT1I	CCWWGG	1 cut(s)	627
Bst2UI	CCWGG	2 cut(s)	455, 509
Bst4CI	ACNGT	3 cut(s)	440, 866, 1302
Bst6I	CTCTTC	3 cut(s)	354, 527, 590
BstBAI	YACGTR	1 cut(s)	1229
BstBI	TTCGAA	2 cut(s)	646, 1016
BstC8I	GCNNGC	4 cut(s)	271, 316, 491, 554
BstDEI	CTNAG	5 cut(s)	5, 603, 1275, 1356, 1385
BstDSI	CCRYGG	2 cut(s)	129, 436
BstENI	CCTNNNNNAGG	1 cut(s)	631
BstF5I	GGATG	7 cut(s)	27, 162, 1035, 1039, 1122, 1180, 1327
BstFNI	CGCG	3 cut(s)	192, 258, 267
BstH2I	RGCGCY	1 cut(s)	621
BstHHI	GCGC	4 cut(s)	210, 269, 620, 727
BstKTI	GATC	2 cut(s)	787, 1351
BstMBI	GATC	2 cut(s)	784, 1348
BstMCI	CGRYCG	1 cut(s)	1196
BstMWI	GCNNNNNNNGC	3 cut(s)	264, 275, 495
BstNI	CCWGG	2 cut(s)	455, 509
BstSCI	CCNGG	3 cut(s)	453, 507, 1087
BstSLI	GKGCMC	1 cut(s)	316
BstUI	CGCG	3 cut(s)	192, 258, 267
BstV1I	GCAGC	4 cut(s)	739, 814, 1210, 1237
BstV2I	GAAGAC	1 cut(s)	244
BstXI	CCANNNNNNTGG	1 cut(s)	838
BstZI	CGGCCG	1 cut(s)	1193
BsuRI	GGCC	8 cut(s)	134, 314, 498, 512, 780, 1081, 1195, 1236
BtgI	CCRYGG	2 cut(s)	129, 436
BtgZI	GCGATG	1 cut(s)	214
BtsCI	GGATG	7 cut(s)	27, 162, 1035, 1039, 1122, 1180, 1327
Cac8I	GCNNGC	4 cut(s)	271, 316, 491, 554
CfoI	GCGC	4 cut(s)	210, 269, 620, 727
Cfr10I	RCCGGY	4 cut(s)	769, 1006, 1195, 1236
Cfr13I	GGNCC	4 cut(s)	9, 133, 312, 313
CseI	GACGC	1 cut(s)	247
Csp6I	GTAC	3 cut(s)	484, 869, 1392
CviAII	CATG	6 cut(s)	202, 403, 424, 1055, 1346, 1395
CviQI	GTAC	3 cut(s)	484, 869, 1392
DdeI	CTNAG	5 cut(s)	5, 603, 1275, 1356, 1385
DpnI	GATC	2 cut(s)	786, 1350
DpnII	GATC	2 cut(s)	784, 1348
EaeI	YGGCCR	1 cut(s)	1193
EagI	CGGCCG	1 cut(s)	1193
Eam1104I	CTCTTC	3 cut(s)	354, 527, 590
EarI	CTCTTC	3 cut(s)	354, 527, 590
EciI	GGCGGA	6 cut(s)	74, 148, 176, 265, 271, 756
Ecl136II	GAGCTC	2 cut(s)	364, 520
EclXI	CGGCCG	1 cut(s)	1193
Eco130I	CCWWGG	1 cut(s)	627
Eco24I	GRGCYC	5 cut(s)	316, 366, 522, 535, 657
Eco47I	GGWCC	1 cut(s)	9
Eco52I	CGGCCG	1 cut(s)	1193
Eco53kI	GAGCTC	2 cut(s)	364, 520
Eco72I	CACGTG	1 cut(s)	1229
EcoICRI	GAGCTC	2 cut(s)	364, 520
EcoNI	CCTNNNNNAGG	1 cut(s)	631
EcoO109I	RGGNCCY	1 cut(s)	9
EcoRII	CCWGG	2 cut(s)	453, 507
EcoT14I	CCWWGG	1 cut(s)	627
EcoT22I	ATGCAT	2 cut(s)	895, 1147
EcoT38I	GRGCYC	5 cut(s)	316, 366, 522, 535, 657
ErhI	CCWWGG	1 cut(s)	627
FaeI	CATG	6 cut(s)	205, 406, 427, 1058, 1349, 1398
FalI	AAGNNNNNCTT	1 cut(s)	1368
FaqI	GGGAC	1 cut(s)	277
FatI	CATG	6 cut(s)	201, 402, 423, 1054, 1345, 1394
FauI	CCCGC	2 cut(s)	133, 323
FblI	GTMKAC	1 cut(s)	237
Fnu4HI	GCNGC	5 cut(s)	190, 728, 828, 1224, 1251
FokI	GGATG	7 cut(s)	14, 149, 1042, 1046, 1129, 1167, 1334
FriOI	GRGCYC	5 cut(s)	316, 366, 522, 535, 657
Fsp4HI	GCNGC	5 cut(s)	190, 728, 828, 1224, 1251
FspBI	CTAG	1 cut(s)	899
GlaI	GCGC	4 cut(s)	209, 268, 619, 726
GluI	GCNGC	5 cut(s)	190, 728, 828, 1224, 1251
HaeII	RGCGCY	1 cut(s)	621
HaeIII	GGCC	8 cut(s)	134, 314, 498, 512, 780, 1081, 1195, 1236
HapII	CCGG	5 cut(s)	770, 1007, 1088, 1196, 1237
HgaI	GACGC	1 cut(s)	247
HhaI	GCGC	4 cut(s)	210, 269, 620, 727
Hin1II	CATG	6 cut(s)	205, 406, 427, 1058, 1349, 1398
Hin6I	GCGC	4 cut(s)	208, 267, 618, 725
HinP1I	GCGC	4 cut(s)	208, 267, 618, 725
HincII	GTYRAC	2 cut(s)	238, 957
HindII	GTYRAC	2 cut(s)	238, 957
HinfI	GANTC	7 cut(s)	239, 290, 398, 419, 643, 953, 1189
HpaII	CCGG	5 cut(s)	770, 1007, 1088, 1196, 1237
HphI	GGTGA	4 cut(s)	85, 166, 643, 865
Hpy166II	GTNNAC	4 cut(s)	238, 571, 869, 957
Hpy188I	TCNGA	2 cut(s)	244, 663
Hpy188III	TCNNGA	2 cut(s)	370, 977
Hpy8I	GTNNAC	4 cut(s)	238, 571, 869, 957
Hpy99I	CGWCG	1 cut(s)	239
HpyAV	CCTTC	7 cut(s)	22, 118, 712, 748, 850, 1012, 1162
HpyCH4III	ACNGT	3 cut(s)	440, 866, 1302
HpyCH4IV	ACGT	2 cut(s)	674, 1228
HpyCH4V	TGCA	6 cut(s)	556, 893, 936, 1054, 1145, 1226
HpyF10VI	GCNNNNNNNGC	3 cut(s)	264, 275, 495
HpyF3I	CTNAG	5 cut(s)	5, 603, 1275, 1356, 1385
HpySE526I	ACGT	2 cut(s)	674, 1228
Hsp92II	CATG	6 cut(s)	205, 406, 427, 1058, 1349, 1398
HspAI	GCGC	4 cut(s)	208, 267, 618, 725
Kzo9I	GATC	2 cut(s)	784, 1348
LguI	GCTCTTC	3 cut(s)	354, 527, 590
LmnI	GCTCC	4 cut(s)	205, 228, 278, 538
Lsp1109I	GCAGC	4 cut(s)	739, 814, 1210, 1237
LweI	GCATC	5 cut(s)	237, 1027, 1048, 1132, 1278
MaeI	CTAG	1 cut(s)	899
MaeII	ACGT	2 cut(s)	674, 1228
MaeIII	GTNAC	1 cut(s)	1315
MalI	GATC	2 cut(s)	786, 1350
MboI	GATC	2 cut(s)	784, 1348
MboII	GAAGA	7 cut(s)	244, 295, 371, 514, 577, 724, 1342
MfeI	CAATTG	2 cut(s)	307, 1370
MhlI	GDGCHC	5 cut(s)	316, 366, 522, 535, 657
MluCI	AATT	4 cut(s)	307, 1255, 1362, 1370
MlyI	GAGTC	5 cut(s)	233, 299, 407, 413, 962
MmeI	TCCRAC	1 cut(s)	267
Mph1103I	ATGCAT	2 cut(s)	895, 1147
MseI	TTAA	6 cut(s)	443, 546, 762, 888, 984, 1110
MspA1I	CMGCKG	1 cut(s)	730
MspI	CCGG	5 cut(s)	770, 1007, 1088, 1196, 1237
MspR9I	CCNGG	3 cut(s)	455, 509, 1089
MunI	CAATTG	2 cut(s)	307, 1370
MvaI	CCWGG	2 cut(s)	455, 509
MvnI	CGCG	3 cut(s)	192, 258, 267
MwoI	GCNNNNNNNGC	3 cut(s)	264, 275, 495
NciI	CCSGG	1 cut(s)	1089
NdeII	GATC	2 cut(s)	784, 1348
NlaIII	CATG	6 cut(s)	205, 406, 427, 1058, 1349, 1398
NlaIV	GGNNCC	3 cut(s)	135, 314, 534
NmuCI	GTSAC	1 cut(s)	1315
NsiI	ATGCAT	2 cut(s)	895, 1147
NspV	TTCGAA	2 cut(s)	646, 1016
PciSI	GCTCTTC	3 cut(s)	354, 527, 590
PcsI	WCGNNNNNNNCGW	4 cut(s)	189, 255, 501, 510
PfeI	GAWTC	2 cut(s)	643, 1189
PflFI	GACNNNGTC	1 cut(s)	248
PflMI	CCANNNNNTGG	1 cut(s)	202
PkrI	GCNGC	5 cut(s)	191, 729, 829, 1225, 1252
PleI	GAGTC	5 cut(s)	233, 298, 406, 413, 961
PmaCI	CACGTG	1 cut(s)	1229
PmlI	CACGTG	1 cut(s)	1229
PpsI	GAGTC	5 cut(s)	233, 298, 406, 413, 961
Ppu21I	YACGTR	1 cut(s)	1229
PpuMI	RGGWCCY	1 cut(s)	9
PshBI	ATTAAT	1 cut(s)	984
PsiI	TTATAA	1 cut(s)	993
Psp124BI	GAGCTC	2 cut(s)	366, 522
Psp5II	RGGWCCY	1 cut(s)	9
Psp6I	CCWGG	2 cut(s)	453, 507
PspCI	CACGTG	1 cut(s)	1229
PspGI	CCWGG	2 cut(s)	453, 507
PspN4I	GGNNCC	3 cut(s)	135, 314, 534
PspOMI	GGGCCC	1 cut(s)	312
PspPI	GGNCC	4 cut(s)	9, 133, 312, 313
PspPPI	RGGWCCY	1 cut(s)	9
PsyI	GACNNNGTC	1 cut(s)	248
PvuII	CAGCTG	1 cut(s)	730
RsaI	GTAC	3 cut(s)	485, 870, 1393
RsaNI	GTAC	3 cut(s)	484, 869, 1392
SacI	GAGCTC	2 cut(s)	366, 522
SalI	GTCGAC	1 cut(s)	236
SapI	GCTCTTC	3 cut(s)	354, 527, 590
SaqAI	TTAA	6 cut(s)	443, 546, 762, 888, 984, 1110
SatI	GCNGC	5 cut(s)	190, 728, 828, 1224, 1251
Sau3AI	GATC	2 cut(s)	784, 1348
Sau96I	GGNCC	4 cut(s)	9, 133, 312, 313
SchI	GAGTC	5 cut(s)	233, 299, 407, 413, 962
ScrFI	CCNGG	3 cut(s)	455, 509, 1089
SduI	GDGCHC	5 cut(s)	316, 366, 522, 535, 657
SfaNI	GCATC	5 cut(s)	237, 1027, 1048, 1132, 1278
SfuI	TTCGAA	2 cut(s)	646, 1016
SinI	GGWCC	1 cut(s)	9
Sse9I	AATT	4 cut(s)	307, 1255, 1362, 1370
SspMI	CTAG	1 cut(s)	899
SstI	GAGCTC	2 cut(s)	366, 522
StyD4I	CCNGG	3 cut(s)	453, 507, 1087
StyI	CCWWGG	1 cut(s)	627
TaaI	ACNGT	3 cut(s)	440, 866, 1302
TaiI	ACGT	2 cut(s)	677, 1231
TaqI	TCGA	7 cut(s)	237, 351, 417, 504, 646, 775, 1016
TasI	AATT	4 cut(s)	307, 1255, 1362, 1370
TauI	GCSGC	1 cut(s)	192
TfiI	GAWTC	2 cut(s)	643, 1189
Tru1I	TTAA	6 cut(s)	443, 546, 762, 888, 984, 1110
Tru9I	TTAA	6 cut(s)	443, 546, 762, 888, 984, 1110
TseFI	GTSAC	1 cut(s)	1315
TseI	GCWGC	4 cut(s)	727, 827, 1223, 1250
Tsp45I	GTSAC	1 cut(s)	1315
TspDTI	ATGAA	5 cut(s)	190, 440, 460, 731, 1181
TspGWI	ACGGA	1 cut(s)	1334
Tth111I	GACNNNGTC	1 cut(s)	248
Van91I	CCANNNNNTGG	1 cut(s)	202
VpaK11BI	GGWCC	1 cut(s)	9
VspI	ATTAAT	1 cut(s)	984
XagI	CCTNNNNNAGG	1 cut(s)	631
XmiI	GTMKAC	1 cut(s)	237
XspI	CTAG	1 cut(s)	899
Zsp2I	ATGCAT	2 cut(s)	895, 1147

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.