Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0005891

Physical Location & Seq

Genomic Coordinates Forward (+)

26763597 .. 26764958

Gene Structure 1362 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002174

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1362 bp

ATGCTCAGGTCCCTCTTCGCCAAGAGTTCCCTCCACCTCTTCTATCTCCACCAAAACCCCAAACTCCGCCACCTCTATGCCTTCCCTCCCCAAAACCCCGCCAAAGACGACTACTTCTCCGCCATCCACCACATCACCAACATCGTCCGCCGCGACCACTTCATGGAGCGCACCCTCAACAAGCTCCGCATCGCCGTCGACTCCGAACTCGTCTTCCGAGTCCTCCGCGCCTGCTCCGCCTCCGCCACCGAGTCCCTCCGCTTCTTCAATTGGGCCCGCACCCACCACCCCACCACCTACCACCCCACCACCCTCGAAACCGAAGAGCTCGTCAAGACCCTCGCCCGCTCCAAAAAGTACGAGTCCATGTGGAAAATCCTCGACTCCATGAAAACCCATCACGCTCTAACACTCTCCCAGGACACCCTTTGCTTCATTATCCAAGAGTACGGCAAGCACGGCCTCATCGACCAGGCCGTTGAGCTCTTCAATCGAGCTCCCAAGACCTTTAACTGCTTGCAGTCCGTGCAACTTCACAACGCTCTGCTCTTCTCTCTCTGCCACACTAAGCTCTTTCACGGCGCTTATGCCCTTGTGCGCAGGCTCATTCGAAAAGGCCTCGTTCCCAATAAGATGACGTATTCCATTTTGGTCAATGCTTGGTGTTCTAATGGCAAGATGAAAGAGGCGCAGCTCTTCTTGGAGGAGATGAGTCACAAGGGGTTTAATCCGCCGCTTCGAGGCCGTGATCTGCTGCTTGAAGGCTTGCTCAATGCTGGTTATATTGAGGCTGCCAAAGATATGGTGAGGAAAATGGTCAAGGAAAACTGTGTACCTCATGTTTCTACTTTTAATGCATTGCTACAAGCTATTTGTAAGTCTGGGGAGGTTGAGTTTTGCACTAGTCTTTATTGGGAGGCAACTCGATTGGGGCTTTGTCCTGATATTAATACTTATAAAGTGTTGATACCGGCGGTTTCCAAGGTTGGGAGGATGGATGATGCATTTAGGCTTTTGCATAATGCGATTGAGGACGGGCACAGACCGTTTCCGGGCTTGTATGCCCCCATTGTTAAGGGGATGTGTAGGAATGGTCAGTTTGATGATGCATTTTGTTTCTTTAGTGAGATGAAGGTCAAGGGTCATCCTCCGAATCGGCCGGTATATACCATGTTGATAACTATGGCTGGACGTGGAGGCCGGTTTGTTGAGGCTGCGAACTACTTGATGGAAATGACTGAGATGGGGTTGATGCCAATTTCGCGGTGCTTTGATTTGGTTACGGATGGATTGAAGAATAGTGGGAAGCATGATCTGGCTAAGAGAATTGAGCAATTGGAAGTTTCTCTTAGGGGTACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090615 GO:0090617 GO:0097159 GO:0140053 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

454

Amino Acids

51.78

Weight (kDa)

9.24

Isoelectric Point (pI)

45.93

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	180 - 222	2.7e-06	PPR repeat family
TPR_24	PF23276	203 - 304	7.7e-07	Fungal tetratrico peptide repeats
PPR_1	PF12854	205 - 238	1.2e-10	PPR repeat
PPR_3	PF13812	234 - 292	7.3e-06	Pentatricopeptide repeat domain
PPR_2	PF13041	252 - 293	9.8e-07	PPR repeat family
PPR_2	PF13041	279 - 326	3.9e-07	PPR repeat family
PPR_2	PF13041	357 - 394	2.9e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18390
fragaria_vesca	FvH4_4g11972
malus_domestica	MD04G1235400.v1.1
prunus_persica	Prupe.6G355300_v2.0.a1
pyrus_communis	pycom04g20890
rosa_chinensis	RchiOBHm_Chr7g0230951
rosa_laevigata	RLG00000001439 RLG00000002174 RLG00000002176
rosa_multiflora	Rmu_sc0000453.1_g000016 Rmu_sc0000453.1_g000017 Rmu_sc0002014.1_g000047
rosa_roxburghii	Rroxscaffold_3G00229640 Rroxscaffold_3G00238690 Rroxscaffold_3G00238710 Rroxscaffold_3G00238720 Rroxscaffold_3G00238730
rosa_rugosa	Rorug07G0263500
rosa_samantha	Rh7AG416900 Rh7AG417000 Rh7BG392800 Rh7BG392900 Rh7CG436000 Rh7CG436100 Rh7DG411100 Rh7DG411200
rosa_wichuraiana	Rw1G007620 Rw7G034520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	957
Acc16I	TGCGCA	1 cut(s)	599
AccB7I	CCANNNNNTGG	1 cut(s)	163
AccBSI	CCGCTC	1 cut(s)	348
AccI	GTMKAC	1 cut(s)	198
AccII	CGCG	3 cut(s)	153, 228, 1264
AcoI	YGGCCR	1 cut(s)	1157
AfaI	GTAC	4 cut(s)	359, 449, 834, 1357
AfiI	CCNNNNNNNGG	4 cut(s)	163, 740, 987, 1052
AgsI	TTSAA	4 cut(s)	268, 490, 761, 1294
AhlI	ACTAGT	1 cut(s)	902
AjiI	CACGTC	1 cut(s)	1193
AjnI	CCWGG	2 cut(s)	417, 471
AloI	GAACNNNNNNTCC	2 cut(s)	198, 230
AluBI	AGCT	7 cut(s)	184, 328, 484, 497, 571, 694, 869
AluI	AGCT	7 cut(s)	184, 328, 484, 497, 571, 694, 869
Alw21I	GWGCWC	3 cut(s)	330, 486, 499
AoxI	GGCC	7 cut(s)	273, 460, 474, 616, 742, 1157, 1198
ApaI	GGGCCC	1 cut(s)	277
ApeKI	GCWGC	4 cut(s)	691, 754, 791, 1214
ArsI	GACNNNNNNTTYG	2 cut(s)	315, 347
AseI	ATTAAT	1 cut(s)	948
AspLEI	GCGC	5 cut(s)	171, 230, 584, 600, 691
AspS9I	GGNCC	3 cut(s)	9, 273, 274
AsuC2I	CCSGG	1 cut(s)	1053
AsuHPI	GGTGA	2 cut(s)	127, 817
AsuII	TTCGAA	1 cut(s)	610
AvaII	GGWCC	1 cut(s)	9
BaeGI	GKGCMC	2 cut(s)	277, 1041
BanII	GRGCYC	4 cut(s)	277, 330, 486, 499
BbsI	GAAGAC	1 cut(s)	205
Bbv12I	GWGCWC	3 cut(s)	330, 486, 499
BbvI	GCAGC	4 cut(s)	703, 741, 778, 1201
BccI	CCATC	6 cut(s)	131, 405, 988, 1222, 1237, 1280
BceAI	ACGGC	6 cut(s)	179, 461, 466, 475, 595, 729
BcgI	CGANNNNNNTGC	2 cut(s)	178, 212
BciT130I	CCWGG	2 cut(s)	419, 473
BcnI	CCSGG	1 cut(s)	1053
BcuI	ACTAGT	1 cut(s)	902
BfaI	CTAG	1 cut(s)	903
BfoI	RGCGCY	1 cut(s)	585
BisI	GCNGC	6 cut(s)	151, 692, 734, 755, 792, 1215
BlsI	GCNGC	6 cut(s)	152, 693, 735, 756, 793, 1216
Bme1390I	CCNGG	3 cut(s)	419, 473, 1053
Bme18I	GGWCC	1 cut(s)	9
BmgBI	CACGTC	1 cut(s)	1193
BmgT120I	GGNCC	3 cut(s)	9, 273, 274
BmiI	GGNNCC	2 cut(s)	11, 275
BmrFI	CCNGG	3 cut(s)	419, 473, 1053
BmsI	GCATC	4 cut(s)	198, 991, 1096, 1242
BpiI	GAAGAC	1 cut(s)	205
Bpu10I	CCTNAGC	1 cut(s)	5
Bpu14I	TTCGAA	1 cut(s)	610
BpuMI	CCSGG	1 cut(s)	1053
BsaJI	CCNNGG	2 cut(s)	417, 981
BsaXI	ACNNNNNCTCC	4 cut(s)	101, 131, 878, 908
Bsc4I	CCNNNNNNNGG	4 cut(s)	163, 740, 987, 1052
Bse118I	RCCGGY	3 cut(s)	970, 1159, 1200
Bse3DI	GCAATG	1 cut(s)	857
BseBI	CCWGG	2 cut(s)	419, 473
BseDI	CCNNGG	2 cut(s)	417, 981
BseGI	GGATG	6 cut(s)	123, 999, 1003, 1086, 1144, 1291
BseLI	CCNNNNNNNGG	4 cut(s)	163, 740, 987, 1052
BseMI	GCAATG	1 cut(s)	857
BseMII	CTCAG	2 cut(s)	19, 1230
BseRI	GAGGAG	1 cut(s)	719
BseSI	GKGCMC	2 cut(s)	277, 1041
BseX3I	CGGCCG	1 cut(s)	1157
BseXI	GCAGC	4 cut(s)	703, 741, 778, 1201
Bsh1236I	CGCG	3 cut(s)	153, 228, 1264
Bsh1285I	CGRYCG	1 cut(s)	1160
BshFI	GGCC	7 cut(s)	275, 462, 476, 618, 744, 1159, 1200
BsiEI	CGRYCG	1 cut(s)	1160
BsiHKAI	GWGCWC	3 cut(s)	330, 486, 499
BsiSI	CCGG	4 cut(s)	971, 1052, 1160, 1201
BslFI	GGGAC	1 cut(s)	238
BslI	CCNNNNNNNGG	4 cut(s)	163, 740, 987, 1052
BsmFI	GGGAC	1 cut(s)	238
BsnI	GGCC	7 cut(s)	275, 462, 476, 618, 744, 1159, 1200
Bsp119I	TTCGAA	1 cut(s)	610
Bsp120I	GGGCCC	1 cut(s)	273
Bsp1286I	GDGCHC	5 cut(s)	277, 330, 486, 499, 1041
Bsp143I	GATC	2 cut(s)	748, 1312
BspANI	GGCC	7 cut(s)	275, 462, 476, 618, 744, 1159, 1200
BspCNI	CTCAG	2 cut(s)	18, 1231
BspFNI	CGCG	3 cut(s)	153, 228, 1264
BspLI	GGNNCC	2 cut(s)	11, 275
BspQI	GCTCTTC	4 cut(s)	318, 491, 554, 701
BspT104I	TTCGAA	1 cut(s)	610
BsrBI	CCGCTC	1 cut(s)	348
BsrDI	GCAATG	1 cut(s)	857
BsrFI	RCCGGY	3 cut(s)	970, 1159, 1200
BssAI	RCCGGY	3 cut(s)	970, 1159, 1200
BssECI	CCNNGG	2 cut(s)	417, 981
BssMI	GATC	2 cut(s)	748, 1312
BssT1I	CCWWGG	1 cut(s)	981
Bst2UI	CCWGG	2 cut(s)	419, 473
Bst4CI	ACNGT	2 cut(s)	830, 1047
Bst6I	CTCTTC	6 cut(s)	20, 44, 318, 491, 554, 701
BstAPI	GCANNNNNTGC	1 cut(s)	526
BstBI	TTCGAA	1 cut(s)	610
BstC8I	GCNNGC	7 cut(s)	232, 277, 346, 455, 518, 602, 767
BstDEI	CTNAG	5 cut(s)	5, 567, 1239, 1320, 1349
BstF5I	GGATG	6 cut(s)	123, 999, 1003, 1086, 1144, 1291
BstFNI	CGCG	3 cut(s)	153, 228, 1264
BstH2I	RGCGCY	1 cut(s)	585
BstHHI	GCGC	5 cut(s)	171, 230, 584, 600, 691
BstKTI	GATC	2 cut(s)	751, 1315
BstMBI	GATC	2 cut(s)	748, 1312
BstMCI	CGRYCG	1 cut(s)	1160
BstMWI	GCNNNNNNNGC	4 cut(s)	236, 459, 526, 1261
BstNI	CCWGG	2 cut(s)	419, 473
BstSCI	CCNGG	3 cut(s)	417, 471, 1051
BstSLI	GKGCMC	2 cut(s)	277, 1041
BstUI	CGCG	3 cut(s)	153, 228, 1264
BstV1I	GCAGC	4 cut(s)	703, 741, 778, 1201
BstV2I	GAAGAC	1 cut(s)	205
BstXI	CCANNNNNNTGG	1 cut(s)	802
BstZI	CGGCCG	1 cut(s)	1157
BsuRI	GGCC	7 cut(s)	275, 462, 476, 618, 744, 1159, 1200
BtgZI	GCGATG	1 cut(s)	175
BtrI	CACGTC	1 cut(s)	1193
BtsCI	GGATG	6 cut(s)	123, 999, 1003, 1086, 1144, 1291
Cac8I	GCNNGC	7 cut(s)	232, 277, 346, 455, 518, 602, 767
CfoI	GCGC	5 cut(s)	171, 230, 584, 600, 691
Cfr10I	RCCGGY	3 cut(s)	970, 1159, 1200
Cfr13I	GGNCC	3 cut(s)	9, 273, 274
Csp6I	GTAC	4 cut(s)	358, 448, 833, 1356
CviAII	CATG	7 cut(s)	163, 367, 388, 839, 1171, 1310, 1359
CviQI	GTAC	4 cut(s)	358, 448, 833, 1356
DdeI	CTNAG	5 cut(s)	5, 567, 1239, 1320, 1349
DpnI	GATC	2 cut(s)	750, 1314
DpnII	GATC	2 cut(s)	748, 1312
EaeI	YGGCCR	1 cut(s)	1157
EagI	CGGCCG	1 cut(s)	1157
Eam1104I	CTCTTC	6 cut(s)	20, 44, 318, 491, 554, 701
EarI	CTCTTC	6 cut(s)	20, 44, 318, 491, 554, 701
EciI	GGCGGA	6 cut(s)	56, 109, 137, 226, 232, 720
Ecl136II	GAGCTC	3 cut(s)	328, 484, 497
EclXI	CGGCCG	1 cut(s)	1157
Eco130I	CCWWGG	1 cut(s)	981
Eco147I	AGGCCT	1 cut(s)	618
Eco24I	GRGCYC	4 cut(s)	277, 330, 486, 499
Eco47I	GGWCC	1 cut(s)	9
Eco52I	CGGCCG	1 cut(s)	1157
Eco53kI	GAGCTC	3 cut(s)	328, 484, 497
EcoICRI	GAGCTC	3 cut(s)	328, 484, 497
EcoO109I	RGGNCCY	1 cut(s)	9
EcoRII	CCWGG	2 cut(s)	417, 471
EcoT14I	CCWWGG	1 cut(s)	981
EcoT22I	ATGCAT	3 cut(s)	859, 1006, 1111
EcoT38I	GRGCYC	4 cut(s)	277, 330, 486, 499
ErhI	CCWWGG	1 cut(s)	981
FaeI	CATG	7 cut(s)	166, 370, 391, 842, 1174, 1313, 1362
FalI	AAGNNNNNCTT	1 cut(s)	1332
FaqI	GGGAC	1 cut(s)	238
FatI	CATG	7 cut(s)	162, 366, 387, 838, 1170, 1309, 1358
FauI	CCCGC	3 cut(s)	106, 284, 353
FblI	GTMKAC	1 cut(s)	198
Fnu4HI	GCNGC	6 cut(s)	151, 692, 734, 755, 792, 1215
FokI	GGATG	6 cut(s)	110, 1006, 1010, 1093, 1131, 1298
FriOI	GRGCYC	4 cut(s)	277, 330, 486, 499
Fsp4HI	GCNGC	6 cut(s)	151, 692, 734, 755, 792, 1215
FspBI	CTAG	1 cut(s)	903
FspI	TGCGCA	1 cut(s)	599
GlaI	GCGC	5 cut(s)	170, 229, 583, 599, 690
GluI	GCNGC	6 cut(s)	151, 692, 734, 755, 792, 1215
HaeII	RGCGCY	1 cut(s)	585
HaeIII	GGCC	7 cut(s)	275, 462, 476, 618, 744, 1159, 1200
HapII	CCGG	4 cut(s)	971, 1052, 1160, 1201
HhaI	GCGC	5 cut(s)	171, 230, 584, 600, 691
Hin1II	CATG	7 cut(s)	166, 370, 391, 842, 1174, 1313, 1362
Hin6I	GCGC	5 cut(s)	169, 228, 582, 598, 689
HinP1I	GCGC	5 cut(s)	169, 228, 582, 598, 689
HincII	GTYRAC	1 cut(s)	199
HindII	GTYRAC	1 cut(s)	199
HinfI	GANTC	7 cut(s)	200, 219, 251, 362, 383, 712, 1153
HpaII	CCGG	4 cut(s)	971, 1052, 1160, 1201
HphI	GGTGA	2 cut(s)	127, 817
Hpy166II	GTNNAC	2 cut(s)	199, 833
Hpy188I	TCNGA	3 cut(s)	205, 218, 1152
Hpy188III	TCNNGA	2 cut(s)	334, 941
Hpy8I	GTNNAC	2 cut(s)	199, 833
Hpy99I	CGWCG	1 cut(s)	200
HpyAV	CCTTC	3 cut(s)	91, 755, 1126
HpyCH4III	ACNGT	2 cut(s)	830, 1047
HpyCH4IV	ACGT	2 cut(s)	638, 1192
HpyCH4V	TGCA	7 cut(s)	520, 529, 857, 900, 1004, 1018, 1109
HpyF10VI	GCNNNNNNNGC	4 cut(s)	236, 459, 526, 1261
HpyF3I	CTNAG	5 cut(s)	5, 567, 1239, 1320, 1349
HpySE526I	ACGT	2 cut(s)	638, 1192
Hsp92II	CATG	7 cut(s)	166, 370, 391, 842, 1174, 1313, 1362
HspAI	GCGC	5 cut(s)	169, 228, 582, 598, 689
Kzo9I	GATC	2 cut(s)	748, 1312
LguI	GCTCTTC	4 cut(s)	318, 491, 554, 701
LmnI	GCTCC	5 cut(s)	166, 189, 239, 353, 502
Lsp1109I	GCAGC	4 cut(s)	703, 741, 778, 1201
LweI	GCATC	4 cut(s)	198, 991, 1096, 1242
MaeI	CTAG	1 cut(s)	903
MaeII	ACGT	2 cut(s)	638, 1192
MaeIII	GTNAC	2 cut(s)	713, 1279
MalI	GATC	2 cut(s)	750, 1314
MbiI	CCGCTC	1 cut(s)	348
MboI	GATC	2 cut(s)	748, 1312
MboII	GAAGA	9 cut(s)	7, 31, 205, 256, 335, 478, 541, 688, 1306
MfeI	CAATTG	2 cut(s)	268, 1334
MhlI	GDGCHC	5 cut(s)	277, 330, 486, 499, 1041
MluCI	AATT	4 cut(s)	268, 1257, 1326, 1334
MlyI	GAGTC	6 cut(s)	194, 228, 260, 371, 377, 721
Mph1103I	ATGCAT	3 cut(s)	859, 1006, 1111
MseI	TTAA	5 cut(s)	510, 726, 852, 948, 1074
MslI	CAYNNNNRTG	1 cut(s)	75
MspI	CCGG	4 cut(s)	971, 1052, 1160, 1201
MspR9I	CCNGG	3 cut(s)	419, 473, 1053
MunI	CAATTG	2 cut(s)	268, 1334
MvaI	CCWGG	2 cut(s)	419, 473
MvnI	CGCG	3 cut(s)	153, 228, 1264
MwoI	GCNNNNNNNGC	4 cut(s)	236, 459, 526, 1261
NciI	CCSGG	1 cut(s)	1053
NdeII	GATC	2 cut(s)	748, 1312
NlaIII	CATG	7 cut(s)	166, 370, 391, 842, 1174, 1313, 1362
NlaIV	GGNNCC	2 cut(s)	11, 275
NmuCI	GTSAC	1 cut(s)	713
NsbI	TGCGCA	1 cut(s)	599
NsiI	ATGCAT	3 cut(s)	859, 1006, 1111
NspV	TTCGAA	1 cut(s)	610
PceI	AGGCCT	1 cut(s)	618
PciSI	GCTCTTC	4 cut(s)	318, 491, 554, 701
PcsI	WCGNNNNNNNCGW	3 cut(s)	150, 465, 474
PfeI	GAWTC	1 cut(s)	1153
PflMI	CCANNNNNTGG	1 cut(s)	163
PkrI	GCNGC	6 cut(s)	152, 693, 735, 756, 793, 1216
PleI	GAGTC	6 cut(s)	194, 227, 259, 370, 377, 720
PpsI	GAGTC	6 cut(s)	194, 227, 259, 370, 377, 720
PpuMI	RGGWCCY	1 cut(s)	9
PshBI	ATTAAT	1 cut(s)	948
PsiI	TTATAA	1 cut(s)	957
Psp124BI	GAGCTC	3 cut(s)	330, 486, 499
Psp5II	RGGWCCY	1 cut(s)	9
Psp6I	CCWGG	2 cut(s)	417, 471
PspGI	CCWGG	2 cut(s)	417, 471
PspN4I	GGNNCC	2 cut(s)	11, 275
PspOMI	GGGCCC	1 cut(s)	273
PspPI	GGNCC	3 cut(s)	9, 273, 274
PspPPI	RGGWCCY	1 cut(s)	9
RsaI	GTAC	4 cut(s)	359, 449, 834, 1357
RsaNI	GTAC	4 cut(s)	358, 448, 833, 1356
RseI	CAYNNNNRTG	1 cut(s)	75
SacI	GAGCTC	3 cut(s)	330, 486, 499
SalI	GTCGAC	1 cut(s)	197
SapI	GCTCTTC	4 cut(s)	318, 491, 554, 701
SaqAI	TTAA	5 cut(s)	510, 726, 852, 948, 1074
SatI	GCNGC	6 cut(s)	151, 692, 734, 755, 792, 1215
Sau3AI	GATC	2 cut(s)	748, 1312
Sau96I	GGNCC	3 cut(s)	9, 273, 274
SchI	GAGTC	6 cut(s)	194, 228, 260, 371, 377, 721
ScrFI	CCNGG	3 cut(s)	419, 473, 1053
SduI	GDGCHC	5 cut(s)	277, 330, 486, 499, 1041
SfaNI	GCATC	4 cut(s)	198, 991, 1096, 1242
SfuI	TTCGAA	1 cut(s)	610
SinI	GGWCC	1 cut(s)	9
SmiMI	CAYNNNNRTG	1 cut(s)	75
SpeI	ACTAGT	1 cut(s)	902
Sse9I	AATT	4 cut(s)	268, 1257, 1326, 1334
SseBI	AGGCCT	1 cut(s)	618
SspMI	CTAG	1 cut(s)	903
SstI	GAGCTC	3 cut(s)	330, 486, 499
StuI	AGGCCT	1 cut(s)	618
StyD4I	CCNGG	3 cut(s)	417, 471, 1051
StyI	CCWWGG	1 cut(s)	981
TaaI	ACNGT	2 cut(s)	830, 1047
TaiI	ACGT	2 cut(s)	641, 1195
TaqI	TCGA	8 cut(s)	198, 315, 381, 468, 493, 610, 739, 925
TasI	AATT	4 cut(s)	268, 1257, 1326, 1334
TauI	GCSGC	2 cut(s)	153, 736
TfiI	GAWTC	1 cut(s)	1153
Tru1I	TTAA	5 cut(s)	510, 726, 852, 948, 1074
Tru9I	TTAA	5 cut(s)	510, 726, 852, 948, 1074
TseFI	GTSAC	1 cut(s)	713
TseI	GCWGC	4 cut(s)	691, 754, 791, 1214
Tsp45I	GTSAC	1 cut(s)	713
TspDTI	ATGAA	5 cut(s)	151, 404, 424, 695, 1145
TspGWI	ACGGA	2 cut(s)	514, 1298
Van91I	CCANNNNNTGG	1 cut(s)	163
VpaK11BI	GGWCC	1 cut(s)	9
VspI	ATTAAT	1 cut(s)	948
XmiI	GTMKAC	1 cut(s)	198
XspI	CTAG	1 cut(s)	903
Zsp2I	ATGCAT	3 cut(s)	859, 1006, 1111

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.