Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr7

Orthogroup ID

OG0005891

Physical Location & Seq

Genomic Coordinates Reverse (-)

51222399 .. 51223790

Gene Structure 1392 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw7G034520.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1392 bp

ATGCTCAGGTCCTTCGCCAAAAGTTCCCTCCACCTCTATCTCCACCAAAACCCAAAAACCCTCCACCTCCTCCTCCTCCGCCACCTCACCACCCTCAATGCCTTCCCTTCCCAAAACCCCGCTGTGGCCCCCACCAAAGACGACTACTTCTCCGCCATCCACCACATCACCAACATCGTCCGCCGCGACCACTTCATGGAGCGCACCCTCAACAAGCTCCGCATCTCCGTCGACTCCGACCTCGTCTTCCGCGTCCTCCGCGCCTGCTCGGCCTCCGCCACCGAGTCCCTCCGCTTCTTCAATTGGGCCCGCACCCACCACCCCACCTACCGCCCCACCACCCTCGAAACCGAAGAGCTCGTCAAGACCCTCGCCCGCTCCAAAAAATACGAGTCCATGTGGAAAATCCTCGACTCCATGAAAACCCACCACGGTTTAACACTCTCCCAGGACACCCTTTGCTTCATTATCCAAGAGTACGGCAAGCACGGCCTGATCGACCAGGCCGTTGAGCTCTTCAATCGAGCTCCCAAGACCTTTAACTGCTTGCAGTCGGTGGAAGTTCACAACGCTCTGCTCTTCTCTCTCTGCCAGACTAAGCTCTTTCACGGCGCTTATGCCTTGGTGAGGAGGCTGATTCGGAAAGGGCTCGTTCCGAATAAGATGACGTATTCCATTTTGGTCAATGCTTGGTGTTCTAATGGGAAGATGAAGGAGGCGCAGCTGTTCTTGGAGGAGATGAGTGAGAAGGGGTTTAATCCGCCGGTTCGAGGCCGTGATCTGCTGGTTGAGGGGTTGCTCAATGCTGGTTATATTGAGGCTGCCAAAGACATGGTAAGGAAAATGGTCAAGGAAAACTGTGTGCCTGATGTTTCTACTTTTAATGCATTGTTAGAAGCTATTTGTAAGTCTGGGGAGGTTGAGTTTTGCATTGGTCTTTATTGGGAGGCAACTGGATTGGGGCTTTGTCCTGATATTAATACTTATAAAGTGTTGATACCGGCGGTTTCGAAGGTTGGGAGCATGGATGATGCATTTAGGCTTTTGCATAATGCGATTGAGGACGGGCACAGGCCGTTTCCGGGCTTGTATGCCCCTATTGTTAAGGGGATGTGTAGGAATGGTCAGTTTGATGATGCATTTTGTTTCTTTAGTGAGATGAAGGTCAAGGGTCATCCTCCGAATCGGCCGGTATATACCATGTTGATAACTATGGCTGGACGTGGAGGCCGGTTTGTTGAGGCTGCGAATTACTTGATGGAGATGACTGAGTTGGGGTTGATGCCGATTTCACGGTGCTTTGATTTGGTCACGGATGGATTGAAGAATAGTGGGAAGCATGATCTGGCTAAGAGAATTGAGCAATTGGAAGTTTCTCTTAGGGGTACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090615 GO:0090617 GO:0097159 GO:0140053 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

463

Amino Acids

52.46

Weight (kDa)

8.94

Isoelectric Point (pI)

41.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	188 - 232	1.3e-06	PPR repeat family
TPR_24	PF23276	213 - 315	2.9e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	215 - 248	1.2e-10	PPR repeat
PPR	PF01535	223 - 252	7.5e-06	PPR repeat
PPR_2	PF13041	262 - 303	8e-08	PPR repeat family
PPR_2	PF13041	289 - 336	6.8e-07	PPR repeat family
PPR_2	PF13041	367 - 404	3e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18390
fragaria_vesca	FvH4_4g11972
malus_domestica	MD04G1235400.v1.1
prunus_persica	Prupe.6G355300_v2.0.a1
pyrus_communis	pycom04g20890
rosa_chinensis	RchiOBHm_Chr7g0230951
rosa_laevigata	RLG00000001439 RLG00000002174 RLG00000002176
rosa_multiflora	Rmu_sc0000453.1_g000016 Rmu_sc0000453.1_g000017 Rmu_sc0002014.1_g000047
rosa_roxburghii	Rroxscaffold_3G00229640 Rroxscaffold_3G00238690 Rroxscaffold_3G00238710 Rroxscaffold_3G00238720 Rroxscaffold_3G00238730
rosa_rugosa	Rorug07G0263500
rosa_samantha	Rh7AG416900 Rh7AG417000 Rh7BG392800 Rh7BG392900 Rh7CG436000 Rh7CG436100 Rh7DG411100 Rh7DG411200
rosa_wichuraiana	Rw1G007620 Rw7G034520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	987
AccB7I	CCANNNNNTGG	1 cut(s)	196
AccBSI	CCGCTC	1 cut(s)	378
AccI	GTMKAC	1 cut(s)	231
AccII	CGCG	3 cut(s)	186, 252, 261
AcoI	YGGCCR	1 cut(s)	1187
AfaI	GTAC	2 cut(s)	479, 1387
AfiI	CCNNNNNNNGG	5 cut(s)	124, 196, 627, 770, 1082
AgsI	TTSAA	3 cut(s)	301, 520, 1324
AjiI	CACGTC	1 cut(s)	1223
AjnI	CCWGG	2 cut(s)	447, 501
AluBI	AGCT	7 cut(s)	217, 358, 514, 527, 601, 724, 899
AluI	AGCT	7 cut(s)	217, 358, 514, 527, 601, 724, 899
Alw21I	GWGCWC	3 cut(s)	360, 516, 529
AoxI	GGCC	9 cut(s)	126, 270, 306, 490, 504, 772, 1073, 1187, 1228
ApaI	GGGCCC	1 cut(s)	310
ApeKI	GCWGC	3 cut(s)	721, 821, 1244
ArsI	GACNNNNNNTTYG	2 cut(s)	345, 377
AseI	ATTAAT	1 cut(s)	978
AspLEI	GCGC	4 cut(s)	204, 263, 614, 721
AspS9I	GGNCC	4 cut(s)	9, 127, 306, 307
AsuC2I	CCSGG	1 cut(s)	1083
AsuHPI	GGTGA	3 cut(s)	79, 160, 637
AsuII	TTCGAA	1 cut(s)	1010
AvaII	GGWCC	1 cut(s)	9
BaeGI	GKGCMC	2 cut(s)	310, 1071
BanII	GRGCYC	5 cut(s)	310, 360, 516, 529, 651
BbsI	GAAGAC	1 cut(s)	238
Bbv12I	GWGCWC	3 cut(s)	360, 516, 529
BbvI	GCAGC	3 cut(s)	733, 808, 1231
BccI	CCATC	3 cut(s)	164, 1252, 1310
BceAI	ACGGC	6 cut(s)	491, 496, 505, 625, 759, 1060
BcgI	CGANNNNNNTGC	2 cut(s)	211, 245
BciT130I	CCWGG	2 cut(s)	449, 503
BcnI	CCSGG	1 cut(s)	1083
BfoI	RGCGCY	1 cut(s)	615
BglI	GCCNNNNNGGC	1 cut(s)	269
BisI	GCNGC	4 cut(s)	184, 722, 822, 1245
BlsI	GCNGC	4 cut(s)	185, 723, 823, 1246
Bme1390I	CCNGG	3 cut(s)	449, 503, 1083
Bme18I	GGWCC	1 cut(s)	9
BmgBI	CACGTC	1 cut(s)	1223
BmgT120I	GGNCC	4 cut(s)	9, 127, 306, 307
BmiI	GGNNCC	2 cut(s)	129, 308
BmrFI	CCNGG	3 cut(s)	449, 503, 1083
BmsI	GCATC	4 cut(s)	231, 1021, 1126, 1272
BpiI	GAAGAC	1 cut(s)	238
Bpu10I	CCTNAGC	1 cut(s)	5
Bpu14I	TTCGAA	1 cut(s)	1010
BpuMI	CCSGG	1 cut(s)	1083
BsaJI	CCNNGG	3 cut(s)	430, 447, 621
BsaXI	ACNNNNNCTCC	4 cut(s)	134, 164, 908, 938
Bsc4I	CCNNNNNNNGG	5 cut(s)	124, 196, 627, 770, 1082
Bse118I	RCCGGY	4 cut(s)	763, 1000, 1189, 1230
Bse1I	ACTGG	1 cut(s)	958
BseBI	CCWGG	2 cut(s)	449, 503
BseDI	CCNNGG	3 cut(s)	430, 447, 621
BseGI	GGATG	5 cut(s)	156, 1033, 1116, 1174, 1321
BseLI	CCNNNNNNNGG	5 cut(s)	124, 196, 627, 770, 1082
BseMII	CTCAG	2 cut(s)	19, 1260
BseNI	ACTGG	1 cut(s)	958
BseRI	GAGGAG	5 cut(s)	59, 62, 65, 643, 749
BseSI	GKGCMC	2 cut(s)	310, 1071
BseX3I	CGGCCG	1 cut(s)	1187
BseXI	GCAGC	3 cut(s)	733, 808, 1231
Bsh1236I	CGCG	3 cut(s)	186, 252, 261
Bsh1285I	CGRYCG	1 cut(s)	1190
BshFI	GGCC	9 cut(s)	128, 272, 308, 492, 506, 774, 1075, 1189, 1230
BsiEI	CGRYCG	1 cut(s)	1190
BsiHKAI	GWGCWC	3 cut(s)	360, 516, 529
BsiSI	CCGG	5 cut(s)	764, 1001, 1082, 1190, 1231
BslFI	GGGAC	1 cut(s)	271
BslI	CCNNNNNNNGG	5 cut(s)	124, 196, 627, 770, 1082
BsmFI	GGGAC	1 cut(s)	271
BsnI	GGCC	9 cut(s)	128, 272, 308, 492, 506, 774, 1075, 1189, 1230
Bsp119I	TTCGAA	1 cut(s)	1010
Bsp120I	GGGCCC	1 cut(s)	306
Bsp1286I	GDGCHC	6 cut(s)	310, 360, 516, 529, 651, 1071
Bsp143I	GATC	3 cut(s)	495, 778, 1342
BspANI	GGCC	9 cut(s)	128, 272, 308, 492, 506, 774, 1075, 1189, 1230
BspCNI	CTCAG	2 cut(s)	18, 1261
BspFNI	CGCG	3 cut(s)	186, 252, 261
BspLI	GGNNCC	2 cut(s)	129, 308
BspQI	GCTCTTC	3 cut(s)	348, 521, 584
BspT104I	TTCGAA	1 cut(s)	1010
BsrBI	CCGCTC	1 cut(s)	378
BsrFI	RCCGGY	4 cut(s)	763, 1000, 1189, 1230
BsrI	ACTGG	1 cut(s)	958
BssAI	RCCGGY	4 cut(s)	763, 1000, 1189, 1230
BssECI	CCNNGG	3 cut(s)	430, 447, 621
BssMI	GATC	3 cut(s)	495, 778, 1342
BssT1I	CCWWGG	1 cut(s)	621
Bst2UI	CCWGG	2 cut(s)	449, 503
Bst4CI	ACNGT	3 cut(s)	434, 860, 1296
Bst6I	CTCTTC	3 cut(s)	348, 521, 584
BstBI	TTCGAA	1 cut(s)	1010
BstC8I	GCNNGC	5 cut(s)	265, 310, 376, 485, 548
BstDEI	CTNAG	5 cut(s)	5, 597, 1269, 1350, 1379
BstDSI	CCRYGG	1 cut(s)	430
BstENI	CCTNNNNNAGG	1 cut(s)	625
BstF5I	GGATG	5 cut(s)	156, 1033, 1116, 1174, 1321
BstFNI	CGCG	3 cut(s)	186, 252, 261
BstH2I	RGCGCY	1 cut(s)	615
BstHHI	GCGC	4 cut(s)	204, 263, 614, 721
BstKTI	GATC	3 cut(s)	498, 781, 1345
BstMBI	GATC	3 cut(s)	495, 778, 1342
BstMCI	CGRYCG	1 cut(s)	1190
BstMWI	GCNNNNNNNGC	3 cut(s)	258, 269, 489
BstNI	CCWGG	2 cut(s)	449, 503
BstSCI	CCNGG	3 cut(s)	447, 501, 1081
BstSLI	GKGCMC	2 cut(s)	310, 1071
BstUI	CGCG	3 cut(s)	186, 252, 261
BstV1I	GCAGC	3 cut(s)	733, 808, 1231
BstV2I	GAAGAC	1 cut(s)	238
BstXI	CCANNNNNNTGG	1 cut(s)	832
BstZI	CGGCCG	1 cut(s)	1187
BsuRI	GGCC	9 cut(s)	128, 272, 308, 492, 506, 774, 1075, 1189, 1230
BtgI	CCRYGG	1 cut(s)	430
BtrI	CACGTC	1 cut(s)	1223
BtsCI	GGATG	5 cut(s)	156, 1033, 1116, 1174, 1321
Cac8I	GCNNGC	5 cut(s)	265, 310, 376, 485, 548
CfoI	GCGC	4 cut(s)	204, 263, 614, 721
Cfr10I	RCCGGY	4 cut(s)	763, 1000, 1189, 1230
Cfr13I	GGNCC	4 cut(s)	9, 127, 306, 307
CseI	GACGC	1 cut(s)	241
Csp6I	GTAC	2 cut(s)	478, 1386
CviAII	CATG	8 cut(s)	196, 397, 418, 832, 1024, 1201, 1340, 1389
CviQI	GTAC	2 cut(s)	478, 1386
DdeI	CTNAG	5 cut(s)	5, 597, 1269, 1350, 1379
DpnI	GATC	3 cut(s)	497, 780, 1344
DpnII	GATC	3 cut(s)	495, 778, 1342
EaeI	YGGCCR	1 cut(s)	1187
EagI	CGGCCG	1 cut(s)	1187
Eam1104I	CTCTTC	3 cut(s)	348, 521, 584
EarI	CTCTTC	3 cut(s)	348, 521, 584
EciI	GGCGGA	5 cut(s)	68, 142, 170, 265, 750
Ecl136II	GAGCTC	3 cut(s)	358, 514, 527
EclXI	CGGCCG	1 cut(s)	1187
Eco130I	CCWWGG	1 cut(s)	621
Eco24I	GRGCYC	5 cut(s)	310, 360, 516, 529, 651
Eco47I	GGWCC	1 cut(s)	9
Eco52I	CGGCCG	1 cut(s)	1187
Eco53kI	GAGCTC	3 cut(s)	358, 514, 527
EcoICRI	GAGCTC	3 cut(s)	358, 514, 527
EcoNI	CCTNNNNNAGG	1 cut(s)	625
EcoO109I	RGGNCCY	1 cut(s)	9
EcoRII	CCWGG	2 cut(s)	447, 501
EcoT14I	CCWWGG	1 cut(s)	621
EcoT22I	ATGCAT	3 cut(s)	889, 1036, 1141
EcoT38I	GRGCYC	5 cut(s)	310, 360, 516, 529, 651
ErhI	CCWWGG	1 cut(s)	621
FaeI	CATG	8 cut(s)	199, 400, 421, 835, 1027, 1204, 1343, 1392
FalI	AAGNNNNNCTT	1 cut(s)	1362
FaqI	GGGAC	1 cut(s)	271
FatI	CATG	8 cut(s)	195, 396, 417, 831, 1023, 1200, 1339, 1388
FauI	CCCGC	3 cut(s)	127, 317, 383
FblI	GTMKAC	1 cut(s)	231
Fnu4HI	GCNGC	4 cut(s)	184, 722, 822, 1245
FokI	GGATG	5 cut(s)	143, 1040, 1123, 1161, 1328
FriOI	GRGCYC	5 cut(s)	310, 360, 516, 529, 651
Fsp4HI	GCNGC	4 cut(s)	184, 722, 822, 1245
GlaI	GCGC	4 cut(s)	203, 262, 613, 720
GluI	GCNGC	4 cut(s)	184, 722, 822, 1245
HaeII	RGCGCY	1 cut(s)	615
HaeIII	GGCC	9 cut(s)	128, 272, 308, 492, 506, 774, 1075, 1189, 1230
HapII	CCGG	5 cut(s)	764, 1001, 1082, 1190, 1231
HgaI	GACGC	1 cut(s)	241
HhaI	GCGC	4 cut(s)	204, 263, 614, 721
Hin1II	CATG	8 cut(s)	199, 400, 421, 835, 1027, 1204, 1343, 1392
Hin6I	GCGC	4 cut(s)	202, 261, 612, 719
HinP1I	GCGC	4 cut(s)	202, 261, 612, 719
HincII	GTYRAC	1 cut(s)	232
HindII	GTYRAC	1 cut(s)	232
HinfI	GANTC	6 cut(s)	233, 284, 392, 413, 637, 1183
HpaII	CCGG	5 cut(s)	764, 1001, 1082, 1190, 1231
HphI	GGTGA	3 cut(s)	79, 160, 637
Hpy166II	GTNNAC	2 cut(s)	232, 565
Hpy188I	TCNGA	4 cut(s)	238, 642, 657, 1182
Hpy188III	TCNNGA	2 cut(s)	364, 971
Hpy8I	GTNNAC	2 cut(s)	232, 565
Hpy99I	CGWCG	1 cut(s)	233
HpyAV	CCTTC	7 cut(s)	22, 112, 117, 706, 742, 1006, 1156
HpyCH4III	ACNGT	3 cut(s)	434, 860, 1296
HpyCH4IV	ACGT	2 cut(s)	668, 1222
HpyCH4V	TGCA	6 cut(s)	550, 887, 930, 1034, 1048, 1139
HpyF10VI	GCNNNNNNNGC	3 cut(s)	258, 269, 489
HpyF3I	CTNAG	5 cut(s)	5, 597, 1269, 1350, 1379
HpySE526I	ACGT	2 cut(s)	668, 1222
Hsp92II	CATG	8 cut(s)	199, 400, 421, 835, 1027, 1204, 1343, 1392
HspAI	GCGC	4 cut(s)	202, 261, 612, 719
Kzo9I	GATC	3 cut(s)	495, 778, 1342
LguI	GCTCTTC	3 cut(s)	348, 521, 584
LmnI	GCTCC	5 cut(s)	199, 222, 383, 532, 1020
Lsp1109I	GCAGC	3 cut(s)	733, 808, 1231
LweI	GCATC	4 cut(s)	231, 1021, 1126, 1272
MaeII	ACGT	2 cut(s)	668, 1222
MaeIII	GTNAC	1 cut(s)	1309
MalI	GATC	3 cut(s)	497, 780, 1344
MbiI	CCGCTC	1 cut(s)	378
MboI	GATC	3 cut(s)	495, 778, 1342
MboII	GAAGA	7 cut(s)	238, 289, 365, 508, 571, 718, 1336
MfeI	CAATTG	2 cut(s)	301, 1364
MhlI	GDGCHC	6 cut(s)	310, 360, 516, 529, 651, 1071
MluCI	AATT	4 cut(s)	301, 1249, 1356, 1364
MlyI	GAGTC	4 cut(s)	227, 293, 401, 407
MmeI	TCCRAC	1 cut(s)	261
Mph1103I	ATGCAT	3 cut(s)	889, 1036, 1141
MseI	TTAA	6 cut(s)	437, 540, 756, 882, 978, 1104
MspA1I	CMGCKG	2 cut(s)	122, 724
MspI	CCGG	5 cut(s)	764, 1001, 1082, 1190, 1231
MspR9I	CCNGG	3 cut(s)	449, 503, 1083
MunI	CAATTG	2 cut(s)	301, 1364
MvaI	CCWGG	2 cut(s)	449, 503
MvnI	CGCG	3 cut(s)	186, 252, 261
MwoI	GCNNNNNNNGC	3 cut(s)	258, 269, 489
NciI	CCSGG	1 cut(s)	1083
NdeII	GATC	3 cut(s)	495, 778, 1342
NlaIII	CATG	8 cut(s)	199, 400, 421, 835, 1027, 1204, 1343, 1392
NlaIV	GGNNCC	2 cut(s)	129, 308
NmeAIII	GCCGAG	1 cut(s)	248
NmuCI	GTSAC	1 cut(s)	1309
NsiI	ATGCAT	3 cut(s)	889, 1036, 1141
NspV	TTCGAA	1 cut(s)	1010
PciSI	GCTCTTC	3 cut(s)	348, 521, 584
PcsI	WCGNNNNNNNCGW	4 cut(s)	183, 249, 495, 504
PfeI	GAWTC	2 cut(s)	637, 1183
PflFI	GACNNNGTC	1 cut(s)	242
PflMI	CCANNNNNTGG	1 cut(s)	196
PkrI	GCNGC	4 cut(s)	185, 723, 823, 1246
PleI	GAGTC	4 cut(s)	227, 292, 400, 407
PpsI	GAGTC	4 cut(s)	227, 292, 400, 407
PpuMI	RGGWCCY	1 cut(s)	9
PshBI	ATTAAT	1 cut(s)	978
PsiI	TTATAA	1 cut(s)	987
Psp124BI	GAGCTC	3 cut(s)	360, 516, 529
Psp5II	RGGWCCY	1 cut(s)	9
Psp6I	CCWGG	2 cut(s)	447, 501
PspGI	CCWGG	2 cut(s)	447, 501
PspN4I	GGNNCC	2 cut(s)	129, 308
PspOMI	GGGCCC	1 cut(s)	306
PspPI	GGNCC	4 cut(s)	9, 127, 306, 307
PspPPI	RGGWCCY	1 cut(s)	9
PsyI	GACNNNGTC	1 cut(s)	242
PvuII	CAGCTG	1 cut(s)	724
RsaI	GTAC	2 cut(s)	479, 1387
RsaNI	GTAC	2 cut(s)	478, 1386
SacI	GAGCTC	3 cut(s)	360, 516, 529
SalI	GTCGAC	1 cut(s)	230
SapI	GCTCTTC	3 cut(s)	348, 521, 584
SaqAI	TTAA	6 cut(s)	437, 540, 756, 882, 978, 1104
SatI	GCNGC	4 cut(s)	184, 722, 822, 1245
Sau3AI	GATC	3 cut(s)	495, 778, 1342
Sau96I	GGNCC	4 cut(s)	9, 127, 306, 307
SchI	GAGTC	4 cut(s)	227, 293, 401, 407
ScrFI	CCNGG	3 cut(s)	449, 503, 1083
SduI	GDGCHC	6 cut(s)	310, 360, 516, 529, 651, 1071
SfaNI	GCATC	4 cut(s)	231, 1021, 1126, 1272
SfuI	TTCGAA	1 cut(s)	1010
SinI	GGWCC	1 cut(s)	9
Sse9I	AATT	4 cut(s)	301, 1249, 1356, 1364
SstI	GAGCTC	3 cut(s)	360, 516, 529
StyD4I	CCNGG	3 cut(s)	447, 501, 1081
StyI	CCWWGG	1 cut(s)	621
TaaI	ACNGT	3 cut(s)	434, 860, 1296
TaiI	ACGT	2 cut(s)	671, 1225
TaqI	TCGA	7 cut(s)	231, 345, 411, 498, 523, 769, 1010
TasI	AATT	4 cut(s)	301, 1249, 1356, 1364
TauI	GCSGC	1 cut(s)	186
TfiI	GAWTC	2 cut(s)	637, 1183
Tru1I	TTAA	6 cut(s)	437, 540, 756, 882, 978, 1104
Tru9I	TTAA	6 cut(s)	437, 540, 756, 882, 978, 1104
TseFI	GTSAC	1 cut(s)	1309
TseI	GCWGC	3 cut(s)	721, 821, 1244
Tsp45I	GTSAC	1 cut(s)	1309
TspDTI	ATGAA	5 cut(s)	184, 434, 454, 725, 1175
TspGWI	ACGGA	2 cut(s)	217, 1328
Tth111I	GACNNNGTC	1 cut(s)	242
Van91I	CCANNNNNTGG	1 cut(s)	196
VpaK11BI	GGWCC	1 cut(s)	9
VspI	ATTAAT	1 cut(s)	978
XagI	CCTNNNNNAGG	1 cut(s)	625
XmiI	GTMKAC	1 cut(s)	231
Zsp2I	ATGCAT	3 cut(s)	889, 1036, 1141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.