Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0005891

Physical Location & Seq

Genomic Coordinates Forward (+)

15655956 .. 15657350

Gene Structure 1395 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000001439

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1395 bp

ATGCAAAAAATGCTCAGGTCCTTCGCCAAAAGTTCCCTCCACCTCTATCTCCACCAAAACCCAAAAACCCTCCACCTCCTCCTCCTCCTCCGTCCCCTCAATGCCTTCCCTCCCCAAAACCCCGCCGTGGCCCCCACCAAAGACGACTACTTCTCCGCCATCCACCACATCACCAACATCGTCCGCCGCGACCACTTCATGGAGCGCACCCTCAACAAGCTCCGCATCTCCGTCGACTCCGACCTCGTCTTCCTCGTCCTCCGCTCCTGCTCCGCCTCCTCCACCGAGTCCCTCCGCTTCTTCAATTGGGCCCGAACCCACCACCCCACCTACCGCCCCACCACCCTCGAAACCGAAGAGCTCATCAAGACTCTAGCCCGCTCCAAAAAATACGAGTCCATGTGGAAAATCCTCGACTCCATGAAAACCCACCACGGTTTAACACTCTCCCAGGACACCCTTTGCTTCATTATCCAAGAGTACGGCAAGCATGGCTTGATCGACCAGGCCGTTGAGCTTTTCAATCGAGCTCCCAAGACCTTTAACTGCTTGCAGTCGGTGGAAGTTCACAACGCTCTGCTCTTCTCTCTCTGCCAGACTAAGCTCTTTCACGGCGCTTATGCCTTGGTGAGGAGGCTGATTCGAAAAGGGCTCGTTCCGAATAAGATGACGTATTCCATTTTGGTCAATGCTTGGTGTTCTAATGGGAAGATGAAGGAGGCGCAGCTGTTCTTGGAGGAGATGAGTGAGAAGGGGTTTAATCCGCTGGTTCGAGGCCGTGATCTGCTGGTTGAGGGGTTGCTCAATGCTGGTTATATTGAGGCTGCCAAAGATATGGTAAGGAAAATGGTGAAGGAAAACTGTGTGCCTGATGTTTCTACTTTTAATGCATTGTTAGAAGCTATTTGTAAGTCTGGGGAGGTTGAGTTTTGCATTGGTCTTTATTGGGAGGCAACTGGATTGGGGCTTTGTCCTGATATTAATACTTATAAAGTGTTGATACCAGCGGTTTCGAAGGTTGGGAGGATGGATGATGCATTTAGGCTTTTGCATAATGCGATTGAGGACGGGCATAGGCCGTTTCCGGGCTTGTATGCCCCTATTGTTAAGGGGATGTGTAGGAATGGTCAGTTTGATGATGCATTTTGTTTCTTTAGTGAGATGAAGGTCAAGGGTCATCCCCCGAATCGGCCGGTATATACCATGTTGATATTTATGGCTGGACGTGGAGGCCGGTTTGTTGAGGCTGCGAATTACTTGATGGAGATGACTGAGTTGGGGTTGATGCCGATTTCGCGGTGCTTTGATTTGGTTACGGATGGATTGAAGAATAGTGGGAAGCATGATCTGGCTAAGAGAATTGAGCAATTGGAAGTTTCTCTTAGGGGTATATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000959 GO:0000963 GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006139 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016787 GO:0016788 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0090615 GO:0090617 GO:0097159 GO:0140053 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2

Protein Analysis

465

Amino Acids

52.76

Weight (kDa)

9.01

Isoelectric Point (pI)

41.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	189 - 233	1.3e-06	PPR repeat family
TPR_24	PF23276	214 - 316	4e-08	Fungal tetratrico peptide repeats
PPR_1	PF12854	216 - 249	1.2e-10	PPR repeat
PPR	PF01535	224 - 253	7.5e-06	PPR repeat
PPR_2	PF13041	263 - 304	8e-08	PPR repeat family
PPR_2	PF13041	290 - 337	6.8e-07	PPR repeat family
PPR_2	PF13041	368 - 404	9e-09	PPR repeat family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005891)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G18390
fragaria_vesca	FvH4_4g11972
malus_domestica	MD04G1235400.v1.1
prunus_persica	Prupe.6G355300_v2.0.a1
pyrus_communis	pycom04g20890
rosa_chinensis	RchiOBHm_Chr7g0230951
rosa_laevigata	RLG00000001439 RLG00000002174 RLG00000002176
rosa_multiflora	Rmu_sc0000453.1_g000016 Rmu_sc0000453.1_g000017 Rmu_sc0002014.1_g000047
rosa_roxburghii	Rroxscaffold_3G00229640 Rroxscaffold_3G00238690 Rroxscaffold_3G00238710 Rroxscaffold_3G00238720 Rroxscaffold_3G00238730
rosa_rugosa	Rorug07G0263500
rosa_samantha	Rh7AG416900 Rh7AG417000 Rh7BG392800 Rh7BG392900 Rh7CG436000 Rh7CG436100 Rh7DG411100 Rh7DG411200
rosa_wichuraiana	Rw1G007620 Rw7G034520

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	990
AccB7I	CCANNNNNTGG	1 cut(s)	199
AccBSI	CCGCTC	2 cut(s)	264, 381
AccI	GTMKAC	1 cut(s)	234
AccII	CGCG	2 cut(s)	189, 1297
AcoI	YGGCCR	1 cut(s)	1190
AfaI	GTAC	1 cut(s)	482
AfiI	CCNNNNNNNGG	5 cut(s)	127, 199, 630, 1085, 1188
AgsI	TTSAA	3 cut(s)	304, 523, 1327
AjiI	CACGTC	1 cut(s)	1226
AjnI	CCWGG	2 cut(s)	450, 504
AluBI	AGCT	7 cut(s)	220, 361, 517, 530, 604, 727, 902
AluI	AGCT	7 cut(s)	220, 361, 517, 530, 604, 727, 902
Alw21I	GWGCWC	2 cut(s)	363, 532
AoxI	GGCC	7 cut(s)	129, 309, 507, 775, 1076, 1190, 1231
ApaI	GGGCCC	1 cut(s)	313
ApeKI	GCWGC	3 cut(s)	724, 824, 1247
AseI	ATTAAT	1 cut(s)	981
AspLEI	GCGC	3 cut(s)	207, 617, 724
AspS9I	GGNCC	4 cut(s)	18, 130, 309, 310
AsuC2I	CCSGG	1 cut(s)	1086
AsuHPI	GGTGA	3 cut(s)	163, 640, 862
AsuII	TTCGAA	2 cut(s)	643, 1013
AvaII	GGWCC	1 cut(s)	18
BaeGI	GKGCMC	1 cut(s)	313
BanII	GRGCYC	4 cut(s)	313, 363, 532, 654
BbsI	GAAGAC	1 cut(s)	241
Bbv12I	GWGCWC	2 cut(s)	363, 532
BbvI	GCAGC	3 cut(s)	736, 811, 1234
BccI	CCATC	4 cut(s)	167, 1021, 1255, 1313
BceAI	ACGGC	6 cut(s)	110, 494, 499, 628, 762, 1063
BcgI	CGANNNNNNTGC	2 cut(s)	214, 248
BciT130I	CCWGG	2 cut(s)	452, 506
BcnI	CCSGG	1 cut(s)	1086
BfaI	CTAG	1 cut(s)	374
BfoI	RGCGCY	1 cut(s)	618
BisI	GCNGC	4 cut(s)	187, 725, 825, 1248
BlsI	GCNGC	4 cut(s)	188, 726, 826, 1249
Bme1390I	CCNGG	3 cut(s)	452, 506, 1086
Bme18I	GGWCC	1 cut(s)	18
BmgBI	CACGTC	1 cut(s)	1226
BmgT120I	GGNCC	4 cut(s)	18, 130, 309, 310
BmiI	GGNNCC	2 cut(s)	132, 311
BmrFI	CCNGG	3 cut(s)	452, 506, 1086
BmsI	GCATC	4 cut(s)	234, 1024, 1129, 1275
BpiI	GAAGAC	1 cut(s)	241
Bpu10I	CCTNAGC	1 cut(s)	14
Bpu14I	TTCGAA	2 cut(s)	643, 1013
BpuMI	CCSGG	1 cut(s)	1086
BsaJI	CCNNGG	4 cut(s)	126, 433, 450, 624
BsaXI	ACNNNNNCTCC	4 cut(s)	137, 167, 911, 941
Bsc4I	CCNNNNNNNGG	5 cut(s)	127, 199, 630, 1085, 1188
Bse118I	RCCGGY	2 cut(s)	1192, 1233
Bse1I	ACTGG	1 cut(s)	961
BseBI	CCWGG	2 cut(s)	452, 506
BseDI	CCNNGG	4 cut(s)	126, 433, 450, 624
BseGI	GGATG	6 cut(s)	159, 1032, 1036, 1119, 1177, 1324
BseLI	CCNNNNNNNGG	5 cut(s)	127, 199, 630, 1085, 1188
BseMII	CTCAG	2 cut(s)	28, 1263
BseNI	ACTGG	1 cut(s)	961
BseRI	GAGGAG	7 cut(s)	68, 71, 74, 77, 268, 646, 752
BseSI	GKGCMC	1 cut(s)	313
BseX3I	CGGCCG	1 cut(s)	1190
BseXI	GCAGC	3 cut(s)	736, 811, 1234
Bsh1236I	CGCG	2 cut(s)	189, 1297
Bsh1285I	CGRYCG	1 cut(s)	1193
BshFI	GGCC	7 cut(s)	131, 311, 509, 777, 1078, 1192, 1233
BsiEI	CGRYCG	1 cut(s)	1193
BsiHKAI	GWGCWC	2 cut(s)	363, 532
BsiSI	CCGG	3 cut(s)	1085, 1193, 1234
BslFI	GGGAC	2 cut(s)	78, 274
BslI	CCNNNNNNNGG	5 cut(s)	127, 199, 630, 1085, 1188
BsmFI	GGGAC	2 cut(s)	78, 274
BsnI	GGCC	7 cut(s)	131, 311, 509, 777, 1078, 1192, 1233
Bsp119I	TTCGAA	2 cut(s)	643, 1013
Bsp120I	GGGCCC	1 cut(s)	309
Bsp1286I	GDGCHC	4 cut(s)	313, 363, 532, 654
Bsp143I	GATC	3 cut(s)	498, 781, 1345
BspANI	GGCC	7 cut(s)	131, 311, 509, 777, 1078, 1192, 1233
BspCNI	CTCAG	2 cut(s)	27, 1264
BspFNI	CGCG	2 cut(s)	189, 1297
BspLI	GGNNCC	2 cut(s)	132, 311
BspQI	GCTCTTC	2 cut(s)	351, 587
BspT104I	TTCGAA	2 cut(s)	643, 1013
BsrBI	CCGCTC	2 cut(s)	264, 381
BsrFI	RCCGGY	2 cut(s)	1192, 1233
BsrI	ACTGG	1 cut(s)	961
BssAI	RCCGGY	2 cut(s)	1192, 1233
BssECI	CCNNGG	4 cut(s)	126, 433, 450, 624
BssMI	GATC	3 cut(s)	498, 781, 1345
BssT1I	CCWWGG	1 cut(s)	624
Bst2UI	CCWGG	2 cut(s)	452, 506
Bst4CI	ACNGT	2 cut(s)	437, 863
Bst6I	CTCTTC	2 cut(s)	351, 587
BstAPI	GCANNNNNTGC	1 cut(s)	10
BstBI	TTCGAA	2 cut(s)	643, 1013
BstC8I	GCNNGC	3 cut(s)	379, 488, 551
BstDEI	CTNAG	5 cut(s)	14, 600, 1272, 1353, 1382
BstDSI	CCRYGG	2 cut(s)	126, 433
BstENI	CCTNNNNNAGG	1 cut(s)	628
BstF5I	GGATG	6 cut(s)	159, 1032, 1036, 1119, 1177, 1324
BstFNI	CGCG	2 cut(s)	189, 1297
BstH2I	RGCGCY	1 cut(s)	618
BstHHI	GCGC	3 cut(s)	207, 617, 724
BstKTI	GATC	3 cut(s)	501, 784, 1348
BstMBI	GATC	3 cut(s)	498, 781, 1345
BstMCI	CGRYCG	1 cut(s)	1193
BstMWI	GCNNNNNNNGC	3 cut(s)	10, 492, 1294
BstNI	CCWGG	2 cut(s)	452, 506
BstSCI	CCNGG	3 cut(s)	450, 504, 1084
BstSLI	GKGCMC	1 cut(s)	313
BstUI	CGCG	2 cut(s)	189, 1297
BstV1I	GCAGC	3 cut(s)	736, 811, 1234
BstV2I	GAAGAC	1 cut(s)	241
BstXI	CCANNNNNNTGG	1 cut(s)	835
BstZI	CGGCCG	1 cut(s)	1190
BsuRI	GGCC	7 cut(s)	131, 311, 509, 777, 1078, 1192, 1233
BtgI	CCRYGG	2 cut(s)	126, 433
BtrI	CACGTC	1 cut(s)	1226
BtsCI	GGATG	6 cut(s)	159, 1032, 1036, 1119, 1177, 1324
Cac8I	GCNNGC	3 cut(s)	379, 488, 551
CfoI	GCGC	3 cut(s)	207, 617, 724
Cfr10I	RCCGGY	2 cut(s)	1192, 1233
Cfr13I	GGNCC	4 cut(s)	18, 130, 309, 310
Csp6I	GTAC	1 cut(s)	481
CviAII	CATG	6 cut(s)	199, 400, 421, 491, 1204, 1343
CviQI	GTAC	1 cut(s)	481
DdeI	CTNAG	5 cut(s)	14, 600, 1272, 1353, 1382
DpnI	GATC	3 cut(s)	500, 783, 1347
DpnII	GATC	3 cut(s)	498, 781, 1345
EaeI	YGGCCR	1 cut(s)	1190
EagI	CGGCCG	1 cut(s)	1190
Eam1104I	CTCTTC	2 cut(s)	351, 587
EarI	CTCTTC	2 cut(s)	351, 587
EciI	GGCGGA	3 cut(s)	145, 173, 262
Ecl136II	GAGCTC	2 cut(s)	361, 530
EclXI	CGGCCG	1 cut(s)	1190
Eco130I	CCWWGG	1 cut(s)	624
Eco24I	GRGCYC	4 cut(s)	313, 363, 532, 654
Eco47I	GGWCC	1 cut(s)	18
Eco52I	CGGCCG	1 cut(s)	1190
Eco53kI	GAGCTC	2 cut(s)	361, 530
EcoICRI	GAGCTC	2 cut(s)	361, 530
EcoNI	CCTNNNNNAGG	1 cut(s)	628
EcoO109I	RGGNCCY	1 cut(s)	18
EcoRII	CCWGG	2 cut(s)	450, 504
EcoT14I	CCWWGG	1 cut(s)	624
EcoT22I	ATGCAT	3 cut(s)	892, 1039, 1144
EcoT38I	GRGCYC	4 cut(s)	313, 363, 532, 654
ErhI	CCWWGG	1 cut(s)	624
FaeI	CATG	6 cut(s)	202, 403, 424, 494, 1207, 1346
FalI	AAGNNNNNCTT	3 cut(s)	479, 511, 1365
FaqI	GGGAC	2 cut(s)	78, 274
FatI	CATG	6 cut(s)	198, 399, 420, 490, 1203, 1342
FauI	CCCGC	2 cut(s)	130, 386
FblI	GTMKAC	1 cut(s)	234
Fnu4HI	GCNGC	4 cut(s)	187, 725, 825, 1248
FokI	GGATG	6 cut(s)	146, 1039, 1043, 1126, 1164, 1331
FriOI	GRGCYC	4 cut(s)	313, 363, 532, 654
Fsp4HI	GCNGC	4 cut(s)	187, 725, 825, 1248
FspBI	CTAG	1 cut(s)	374
GlaI	GCGC	3 cut(s)	206, 616, 723
GluI	GCNGC	4 cut(s)	187, 725, 825, 1248
HaeII	RGCGCY	1 cut(s)	618
HaeIII	GGCC	7 cut(s)	131, 311, 509, 777, 1078, 1192, 1233
HapII	CCGG	3 cut(s)	1085, 1193, 1234
HhaI	GCGC	3 cut(s)	207, 617, 724
Hin1II	CATG	6 cut(s)	202, 403, 424, 494, 1207, 1346
Hin6I	GCGC	3 cut(s)	205, 615, 722
HinP1I	GCGC	3 cut(s)	205, 615, 722
HincII	GTYRAC	1 cut(s)	235
HindII	GTYRAC	1 cut(s)	235
HinfI	GANTC	7 cut(s)	236, 287, 370, 395, 416, 640, 1186
HpaII	CCGG	3 cut(s)	1085, 1193, 1234
HphI	GGTGA	3 cut(s)	163, 640, 862
Hpy166II	GTNNAC	2 cut(s)	235, 568
Hpy188I	TCNGA	2 cut(s)	241, 660
Hpy188III	TCNNGA	2 cut(s)	367, 974
Hpy8I	GTNNAC	2 cut(s)	235, 568
Hpy99I	CGWCG	1 cut(s)	236
HpyAV	CCTTC	7 cut(s)	31, 115, 709, 745, 847, 1009, 1159
HpyCH4III	ACNGT	2 cut(s)	437, 863
HpyCH4IV	ACGT	2 cut(s)	671, 1225
HpyCH4V	TGCA	7 cut(s)	4, 553, 890, 933, 1037, 1051, 1142
HpyF10VI	GCNNNNNNNGC	3 cut(s)	10, 492, 1294
HpyF3I	CTNAG	5 cut(s)	14, 600, 1272, 1353, 1382
HpySE526I	ACGT	2 cut(s)	671, 1225
Hsp92II	CATG	6 cut(s)	202, 403, 424, 494, 1207, 1346
HspAI	GCGC	3 cut(s)	205, 615, 722
Kzo9I	GATC	3 cut(s)	498, 781, 1345
LguI	GCTCTTC	2 cut(s)	351, 587
LmnI	GCTCC	6 cut(s)	202, 225, 269, 275, 386, 535
Lsp1109I	GCAGC	3 cut(s)	736, 811, 1234
LweI	GCATC	4 cut(s)	234, 1024, 1129, 1275
MaeI	CTAG	1 cut(s)	374
MaeII	ACGT	2 cut(s)	671, 1225
MaeIII	GTNAC	1 cut(s)	1312
MalI	GATC	3 cut(s)	500, 783, 1347
MbiI	CCGCTC	2 cut(s)	264, 381
MboI	GATC	3 cut(s)	498, 781, 1345
MboII	GAAGA	6 cut(s)	241, 292, 368, 574, 721, 1339
MfeI	CAATTG	2 cut(s)	304, 1367
MhlI	GDGCHC	4 cut(s)	313, 363, 532, 654
MluCI	AATT	4 cut(s)	304, 1252, 1359, 1367
MlyI	GAGTC	5 cut(s)	230, 296, 364, 404, 410
MmeI	TCCRAC	1 cut(s)	264
Mph1103I	ATGCAT	3 cut(s)	892, 1039, 1144
MseI	TTAA	6 cut(s)	440, 543, 759, 885, 981, 1107
MspA1I	CMGCKG	3 cut(s)	727, 766, 1007
MspI	CCGG	3 cut(s)	1085, 1193, 1234
MspR9I	CCNGG	3 cut(s)	452, 506, 1086
MunI	CAATTG	2 cut(s)	304, 1367
MvaI	CCWGG	2 cut(s)	452, 506
MvnI	CGCG	2 cut(s)	189, 1297
MwoI	GCNNNNNNNGC	3 cut(s)	10, 492, 1294
NciI	CCSGG	1 cut(s)	1086
NdeII	GATC	3 cut(s)	498, 781, 1345
NlaIII	CATG	6 cut(s)	202, 403, 424, 494, 1207, 1346
NlaIV	GGNNCC	2 cut(s)	132, 311
NsiI	ATGCAT	3 cut(s)	892, 1039, 1144
NspV	TTCGAA	2 cut(s)	643, 1013
PciSI	GCTCTTC	2 cut(s)	351, 587
PcsI	WCGNNNNNNNCGW	3 cut(s)	186, 252, 507
PfeI	GAWTC	2 cut(s)	640, 1186
PflFI	GACNNNGTC	1 cut(s)	245
PflMI	CCANNNNNTGG	1 cut(s)	199
PkrI	GCNGC	4 cut(s)	188, 726, 826, 1249
PleI	GAGTC	5 cut(s)	230, 295, 364, 403, 410
PpsI	GAGTC	5 cut(s)	230, 295, 364, 403, 410
PpuMI	RGGWCCY	1 cut(s)	18
PshBI	ATTAAT	1 cut(s)	981
PsiI	TTATAA	1 cut(s)	990
Psp124BI	GAGCTC	2 cut(s)	363, 532
Psp5II	RGGWCCY	1 cut(s)	18
Psp6I	CCWGG	2 cut(s)	450, 504
PspGI	CCWGG	2 cut(s)	450, 504
PspN4I	GGNNCC	2 cut(s)	132, 311
PspOMI	GGGCCC	1 cut(s)	309
PspPI	GGNCC	4 cut(s)	18, 130, 309, 310
PspPPI	RGGWCCY	1 cut(s)	18
PsyI	GACNNNGTC	1 cut(s)	245
PvuII	CAGCTG	1 cut(s)	727
RsaI	GTAC	1 cut(s)	482
RsaNI	GTAC	1 cut(s)	481
SacI	GAGCTC	2 cut(s)	363, 532
SalI	GTCGAC	1 cut(s)	233
SapI	GCTCTTC	2 cut(s)	351, 587
SaqAI	TTAA	6 cut(s)	440, 543, 759, 885, 981, 1107
SatI	GCNGC	4 cut(s)	187, 725, 825, 1248
Sau3AI	GATC	3 cut(s)	498, 781, 1345
Sau96I	GGNCC	4 cut(s)	18, 130, 309, 310
SchI	GAGTC	5 cut(s)	230, 296, 364, 404, 410
ScrFI	CCNGG	3 cut(s)	452, 506, 1086
SduI	GDGCHC	4 cut(s)	313, 363, 532, 654
SfaNI	GCATC	4 cut(s)	234, 1024, 1129, 1275
SfuI	TTCGAA	2 cut(s)	643, 1013
SinI	GGWCC	1 cut(s)	18
Sse9I	AATT	4 cut(s)	304, 1252, 1359, 1367
SspMI	CTAG	1 cut(s)	374
SstI	GAGCTC	2 cut(s)	363, 532
StyD4I	CCNGG	3 cut(s)	450, 504, 1084
StyI	CCWWGG	1 cut(s)	624
TaaI	ACNGT	2 cut(s)	437, 863
TaiI	ACGT	2 cut(s)	674, 1228
TaqI	TCGA	8 cut(s)	234, 348, 414, 501, 526, 643, 772, 1013
TasI	AATT	4 cut(s)	304, 1252, 1359, 1367
TauI	GCSGC	1 cut(s)	189
TfiI	GAWTC	2 cut(s)	640, 1186
Tru1I	TTAA	6 cut(s)	440, 543, 759, 885, 981, 1107
Tru9I	TTAA	6 cut(s)	440, 543, 759, 885, 981, 1107
TseI	GCWGC	3 cut(s)	724, 824, 1247
TspDTI	ATGAA	5 cut(s)	187, 437, 457, 728, 1178
TspGWI	ACGGA	3 cut(s)	80, 220, 1331
Tth111I	GACNNNGTC	1 cut(s)	245
Van91I	CCANNNNNTGG	1 cut(s)	199
VpaK11BI	GGWCC	1 cut(s)	18
VspI	ATTAAT	1 cut(s)	981
XagI	CCTNNNNNAGG	1 cut(s)	628
XmiI	GTMKAC	1 cut(s)	234
XspI	CTAG	1 cut(s)	374
Zsp2I	ATGCAT	3 cut(s)	892, 1039, 1144

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.