Pentatricopeptide repeat-containing protein At5g18390
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G18390 |
| fragaria_vesca | FvH4_4g11972 |
| malus_domestica | MD04G1235400.v1.1 |
| prunus_persica | Prupe.6G355300_v2.0.a1 |
| pyrus_communis | pycom04g20890 |
| rosa_chinensis | RchiOBHm_Chr7g0230951 |
| rosa_laevigata | RLG00000001439 RLG00000002174 RLG00000002176 |
| rosa_multiflora | Rmu_sc0000453.1_g000016 Rmu_sc0000453.1_g000017 Rmu_sc0002014.1_g000047 |
| rosa_roxburghii | Rroxscaffold_3G00229640 Rroxscaffold_3G00238690 Rroxscaffold_3G00238710 Rroxscaffold_3G00238720 Rroxscaffold_3G00238730 |
| rosa_rugosa | Rorug07G0263500 |
| rosa_samantha | Rh7AG416900 Rh7AG417000 Rh7BG392800 Rh7BG392900 Rh7CG436000 Rh7CG436100 Rh7DG411100 Rh7DG411200 |
| rosa_wichuraiana | Rw1G007620 Rw7G034520 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1002 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 211 |
| AccBSI | CCGCTC | 1 cut(s) | 393 |
| AccI | GTMKAC | 1 cut(s) | 246 |
| AccII | CGCG | 3 cut(s) | 201, 267, 276 |
| AclWI | GGATC | 1 cut(s) | 671 |
| AcoI | YGGCCR | 1 cut(s) | 1202 |
| AfaI | GTAC | 2 cut(s) | 494, 1402 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 139, 211, 344, 642, 785, 1097 |
| AgsI | TTSAA | 3 cut(s) | 316, 535, 1339 |
| AjiI | CACGTC | 1 cut(s) | 1238 |
| AjnI | CCWGG | 2 cut(s) | 462, 516 |
| AluBI | AGCT | 7 cut(s) | 232, 373, 529, 542, 616, 739, 914 |
| AluI | AGCT | 7 cut(s) | 232, 373, 529, 542, 616, 739, 914 |
| Alw21I | GWGCWC | 3 cut(s) | 375, 531, 544 |
| AlwI | GGATC | 1 cut(s) | 671 |
| AoxI | GGCC | 9 cut(s) | 141, 321, 346, 505, 519, 787, 1088, 1202, 1243 |
| ApaI | GGGCCC | 1 cut(s) | 325 |
| ApeKI | GCWGC | 3 cut(s) | 736, 836, 1259 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 360, 392 |
| AseI | ATTAAT | 1 cut(s) | 993 |
| AspLEI | GCGC | 4 cut(s) | 219, 278, 629, 736 |
| AspS9I | GGNCC | 5 cut(s) | 9, 142, 321, 322, 347 |
| AsuC2I | CCSGG | 1 cut(s) | 1098 |
| AsuHPI | GGTGA | 3 cut(s) | 94, 175, 652 |
| AsuII | TTCGAA | 1 cut(s) | 1025 |
| AvaII | GGWCC | 1 cut(s) | 9 |
| BaeGI | GKGCMC | 2 cut(s) | 325, 1086 |
| BanII | GRGCYC | 4 cut(s) | 325, 375, 531, 544 |
| BbsI | GAAGAC | 1 cut(s) | 253 |
| Bbv12I | GWGCWC | 3 cut(s) | 375, 531, 544 |
| BbvI | GCAGC | 3 cut(s) | 748, 823, 1246 |
| BccI | CCATC | 4 cut(s) | 179, 1033, 1267, 1325 |
| BceAI | ACGGC | 8 cut(s) | 122, 361, 506, 511, 520, 640, 774, 1075 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 226, 260 |
| BciT130I | CCWGG | 2 cut(s) | 464, 518 |
| BcnI | CCSGG | 1 cut(s) | 1098 |
| BfoI | RGCGCY | 1 cut(s) | 630 |
| BisI | GCNGC | 4 cut(s) | 199, 737, 837, 1260 |
| BlsI | GCNGC | 4 cut(s) | 200, 738, 838, 1261 |
| Bme1390I | CCNGG | 3 cut(s) | 464, 518, 1098 |
| Bme18I | GGWCC | 1 cut(s) | 9 |
| BmgBI | CACGTC | 1 cut(s) | 1238 |
| BmgT120I | GGNCC | 5 cut(s) | 9, 142, 321, 322, 347 |
| BmiI | GGNNCC | 3 cut(s) | 144, 323, 349 |
| BmrFI | CCNGG | 3 cut(s) | 464, 518, 1098 |
| BmsI | GCATC | 4 cut(s) | 246, 1036, 1141, 1287 |
| BpiI | GAAGAC | 1 cut(s) | 253 |
| Bpu10I | CCTNAGC | 1 cut(s) | 5 |
| Bpu14I | TTCGAA | 1 cut(s) | 1025 |
| BpuMI | CCSGG | 1 cut(s) | 1098 |
| BsaJI | CCNNGG | 4 cut(s) | 138, 445, 462, 636 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 149, 179, 923, 953 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 139, 211, 344, 642, 785, 1097 |
| Bse118I | RCCGGY | 4 cut(s) | 778, 1015, 1204, 1245 |
| Bse1I | ACTGG | 1 cut(s) | 973 |
| BseBI | CCWGG | 2 cut(s) | 464, 518 |
| BseDI | CCNNGG | 4 cut(s) | 138, 445, 462, 636 |
| BseGI | GGATG | 6 cut(s) | 171, 1044, 1048, 1131, 1189, 1336 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 139, 211, 344, 642, 785, 1097 |
| BseMII | CTCAG | 2 cut(s) | 19, 1275 |
| BseNI | ACTGG | 1 cut(s) | 973 |
| BseRI | GAGGAG | 6 cut(s) | 71, 74, 77, 80, 658, 764 |
| BseSI | GKGCMC | 2 cut(s) | 325, 1086 |
| BseX3I | CGGCCG | 1 cut(s) | 1202 |
| BseXI | GCAGC | 3 cut(s) | 748, 823, 1246 |
| Bsh1236I | CGCG | 3 cut(s) | 201, 267, 276 |
| Bsh1285I | CGRYCG | 1 cut(s) | 1205 |
| BshFI | GGCC | 9 cut(s) | 143, 323, 348, 507, 521, 789, 1090, 1204, 1245 |
| BsiEI | CGRYCG | 1 cut(s) | 1205 |
| BsiHKAI | GWGCWC | 3 cut(s) | 375, 531, 544 |
| BsiSI | CCGG | 5 cut(s) | 779, 1016, 1097, 1205, 1246 |
| BslFI | GGGAC | 1 cut(s) | 286 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 139, 211, 344, 642, 785, 1097 |
| BsmFI | GGGAC | 1 cut(s) | 286 |
| BsnI | GGCC | 9 cut(s) | 143, 323, 348, 507, 521, 789, 1090, 1204, 1245 |
| Bsp119I | TTCGAA | 1 cut(s) | 1025 |
| Bsp120I | GGGCCC | 1 cut(s) | 321 |
| Bsp1286I | GDGCHC | 5 cut(s) | 325, 375, 531, 544, 1086 |
| Bsp143I | GATC | 4 cut(s) | 510, 663, 793, 1357 |
| BspANI | GGCC | 9 cut(s) | 143, 323, 348, 507, 521, 789, 1090, 1204, 1245 |
| BspCNI | CTCAG | 2 cut(s) | 18, 1276 |
| BspFNI | CGCG | 3 cut(s) | 201, 267, 276 |
| BspLI | GGNNCC | 3 cut(s) | 144, 323, 349 |
| BspPI | GGATC | 1 cut(s) | 671 |
| BspQI | GCTCTTC | 3 cut(s) | 363, 536, 599 |
| BspT104I | TTCGAA | 1 cut(s) | 1025 |
| BsrBI | CCGCTC | 1 cut(s) | 393 |
| BsrFI | RCCGGY | 4 cut(s) | 778, 1015, 1204, 1245 |
| BsrI | ACTGG | 1 cut(s) | 973 |
| BssAI | RCCGGY | 4 cut(s) | 778, 1015, 1204, 1245 |
| BssECI | CCNNGG | 4 cut(s) | 138, 445, 462, 636 |
| BssMI | GATC | 4 cut(s) | 510, 663, 793, 1357 |
| BssT1I | CCWWGG | 1 cut(s) | 636 |
| Bst2UI | CCWGG | 2 cut(s) | 464, 518 |
| Bst4CI | ACNGT | 3 cut(s) | 449, 875, 1311 |
| Bst6I | CTCTTC | 3 cut(s) | 363, 536, 599 |
| BstBI | TTCGAA | 1 cut(s) | 1025 |
| BstC8I | GCNNGC | 5 cut(s) | 280, 325, 391, 500, 563 |
| BstDEI | CTNAG | 5 cut(s) | 5, 612, 1284, 1365, 1394 |
| BstDSI | CCRYGG | 2 cut(s) | 138, 445 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 640 |
| BstF5I | GGATG | 6 cut(s) | 171, 1044, 1048, 1131, 1189, 1336 |
| BstFNI | CGCG | 3 cut(s) | 201, 267, 276 |
| BstH2I | RGCGCY | 1 cut(s) | 630 |
| BstHHI | GCGC | 4 cut(s) | 219, 278, 629, 736 |
| BstKTI | GATC | 4 cut(s) | 513, 666, 796, 1360 |
| BstMBI | GATC | 4 cut(s) | 510, 663, 793, 1357 |
| BstMCI | CGRYCG | 1 cut(s) | 1205 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 273, 284, 504 |
| BstNI | CCWGG | 2 cut(s) | 464, 518 |
| BstSCI | CCNGG | 3 cut(s) | 462, 516, 1096 |
| BstSLI | GKGCMC | 2 cut(s) | 325, 1086 |
| BstUI | CGCG | 3 cut(s) | 201, 267, 276 |
| BstV1I | GCAGC | 3 cut(s) | 748, 823, 1246 |
| BstV2I | GAAGAC | 1 cut(s) | 253 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 847 |
| BstZI | CGGCCG | 1 cut(s) | 1202 |
| BsuRI | GGCC | 9 cut(s) | 143, 323, 348, 507, 521, 789, 1090, 1204, 1245 |
| BtgI | CCRYGG | 2 cut(s) | 138, 445 |
| BtrI | CACGTC | 1 cut(s) | 1238 |
| BtsCI | GGATG | 6 cut(s) | 171, 1044, 1048, 1131, 1189, 1336 |
| Cac8I | GCNNGC | 5 cut(s) | 280, 325, 391, 500, 563 |
| CfoI | GCGC | 4 cut(s) | 219, 278, 629, 736 |
| Cfr10I | RCCGGY | 4 cut(s) | 778, 1015, 1204, 1245 |
| Cfr13I | GGNCC | 5 cut(s) | 9, 142, 321, 322, 347 |
| CseI | GACGC | 1 cut(s) | 256 |
| Csp6I | GTAC | 2 cut(s) | 493, 1401 |
| CviAII | CATG | 7 cut(s) | 211, 412, 433, 847, 1216, 1355, 1404 |
| CviQI | GTAC | 2 cut(s) | 493, 1401 |
| DdeI | CTNAG | 5 cut(s) | 5, 612, 1284, 1365, 1394 |
| DpnI | GATC | 4 cut(s) | 512, 665, 795, 1359 |
| DpnII | GATC | 4 cut(s) | 510, 663, 793, 1357 |
| EaeI | YGGCCR | 1 cut(s) | 1202 |
| EagI | CGGCCG | 1 cut(s) | 1202 |
| Eam1104I | CTCTTC | 3 cut(s) | 363, 536, 599 |
| EarI | CTCTTC | 3 cut(s) | 363, 536, 599 |
| EciI | GGCGGA | 6 cut(s) | 83, 157, 185, 274, 280, 765 |
| Ecl136II | GAGCTC | 3 cut(s) | 373, 529, 542 |
| EclXI | CGGCCG | 1 cut(s) | 1202 |
| Eco130I | CCWWGG | 1 cut(s) | 636 |
| Eco24I | GRGCYC | 4 cut(s) | 325, 375, 531, 544 |
| Eco47I | GGWCC | 1 cut(s) | 9 |
| Eco52I | CGGCCG | 1 cut(s) | 1202 |
| Eco53kI | GAGCTC | 3 cut(s) | 373, 529, 542 |
| EcoICRI | GAGCTC | 3 cut(s) | 373, 529, 542 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 640 |
| EcoO109I | RGGNCCY | 1 cut(s) | 9 |
| EcoRII | CCWGG | 2 cut(s) | 462, 516 |
| EcoT14I | CCWWGG | 1 cut(s) | 636 |
| EcoT22I | ATGCAT | 3 cut(s) | 904, 1051, 1156 |
| EcoT38I | GRGCYC | 4 cut(s) | 325, 375, 531, 544 |
| ErhI | CCWWGG | 1 cut(s) | 636 |
| FaeI | CATG | 7 cut(s) | 214, 415, 436, 850, 1219, 1358, 1407 |
| FalI | AAGNNNNNCTT | 1 cut(s) | 1377 |
| FaqI | GGGAC | 1 cut(s) | 286 |
| FatI | CATG | 7 cut(s) | 210, 411, 432, 846, 1215, 1354, 1403 |
| FauI | CCCGC | 3 cut(s) | 142, 332, 398 |
| FblI | GTMKAC | 1 cut(s) | 246 |
| Fnu4HI | GCNGC | 4 cut(s) | 199, 737, 837, 1260 |
| FokI | GGATG | 6 cut(s) | 158, 1051, 1055, 1138, 1176, 1343 |
| FriOI | GRGCYC | 4 cut(s) | 325, 375, 531, 544 |
| Fsp4HI | GCNGC | 4 cut(s) | 199, 737, 837, 1260 |
| GlaI | GCGC | 4 cut(s) | 218, 277, 628, 735 |
| GluI | GCNGC | 4 cut(s) | 199, 737, 837, 1260 |
| HaeII | RGCGCY | 1 cut(s) | 630 |
| HaeIII | GGCC | 9 cut(s) | 143, 323, 348, 507, 521, 789, 1090, 1204, 1245 |
| HapII | CCGG | 5 cut(s) | 779, 1016, 1097, 1205, 1246 |
| HgaI | GACGC | 1 cut(s) | 256 |
| HhaI | GCGC | 4 cut(s) | 219, 278, 629, 736 |
| Hin1II | CATG | 7 cut(s) | 214, 415, 436, 850, 1219, 1358, 1407 |
| Hin6I | GCGC | 4 cut(s) | 217, 276, 627, 734 |
| HinP1I | GCGC | 4 cut(s) | 217, 276, 627, 734 |
| HincII | GTYRAC | 1 cut(s) | 247 |
| HindII | GTYRAC | 1 cut(s) | 247 |
| HinfI | GANTC | 6 cut(s) | 248, 299, 407, 428, 652, 1198 |
| HpaII | CCGG | 5 cut(s) | 779, 1016, 1097, 1205, 1246 |
| HphI | GGTGA | 3 cut(s) | 94, 175, 652 |
| Hpy166II | GTNNAC | 2 cut(s) | 247, 580 |
| Hpy188I | TCNGA | 4 cut(s) | 253, 657, 672, 1197 |
| Hpy188III | TCNNGA | 2 cut(s) | 379, 986 |
| Hpy8I | GTNNAC | 2 cut(s) | 247, 580 |
| Hpy99I | CGWCG | 1 cut(s) | 248 |
| HpyAV | CCTTC | 6 cut(s) | 22, 127, 721, 757, 1021, 1171 |
| HpyCH4III | ACNGT | 3 cut(s) | 449, 875, 1311 |
| HpyCH4IV | ACGT | 2 cut(s) | 683, 1237 |
| HpyCH4V | TGCA | 6 cut(s) | 565, 902, 945, 1049, 1063, 1154 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 273, 284, 504 |
| HpyF3I | CTNAG | 5 cut(s) | 5, 612, 1284, 1365, 1394 |
| HpySE526I | ACGT | 2 cut(s) | 683, 1237 |
| Hsp92II | CATG | 7 cut(s) | 214, 415, 436, 850, 1219, 1358, 1407 |
| HspAI | GCGC | 4 cut(s) | 217, 276, 627, 734 |
| Kzo9I | GATC | 4 cut(s) | 510, 663, 793, 1357 |
| LguI | GCTCTTC | 3 cut(s) | 363, 536, 599 |
| LmnI | GCTCC | 5 cut(s) | 214, 237, 287, 398, 547 |
| Lsp1109I | GCAGC | 3 cut(s) | 748, 823, 1246 |
| LweI | GCATC | 4 cut(s) | 246, 1036, 1141, 1287 |
| MaeII | ACGT | 2 cut(s) | 683, 1237 |
| MaeIII | GTNAC | 1 cut(s) | 1324 |
| MalI | GATC | 4 cut(s) | 512, 665, 795, 1359 |
| MbiI | CCGCTC | 1 cut(s) | 393 |
| MboI | GATC | 4 cut(s) | 510, 663, 793, 1357 |
| MboII | GAAGA | 7 cut(s) | 253, 304, 380, 523, 586, 733, 1351 |
| MfeI | CAATTG | 2 cut(s) | 316, 1379 |
| MhlI | GDGCHC | 5 cut(s) | 325, 375, 531, 544, 1086 |
| MluCI | AATT | 4 cut(s) | 316, 1264, 1371, 1379 |
| MlyI | GAGTC | 4 cut(s) | 242, 308, 416, 422 |
| MmeI | TCCRAC | 1 cut(s) | 276 |
| Mph1103I | ATGCAT | 3 cut(s) | 904, 1051, 1156 |
| MseI | TTAA | 6 cut(s) | 452, 555, 771, 897, 993, 1119 |
| MspA1I | CMGCKG | 1 cut(s) | 739 |
| MspI | CCGG | 5 cut(s) | 779, 1016, 1097, 1205, 1246 |
| MspR9I | CCNGG | 3 cut(s) | 464, 518, 1098 |
| MunI | CAATTG | 2 cut(s) | 316, 1379 |
| MvaI | CCWGG | 2 cut(s) | 464, 518 |
| MvnI | CGCG | 3 cut(s) | 201, 267, 276 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 273, 284, 504 |
| NciI | CCSGG | 1 cut(s) | 1098 |
| NdeII | GATC | 4 cut(s) | 510, 663, 793, 1357 |
| NlaIII | CATG | 7 cut(s) | 214, 415, 436, 850, 1219, 1358, 1407 |
| NlaIV | GGNNCC | 3 cut(s) | 144, 323, 349 |
| NmuCI | GTSAC | 1 cut(s) | 1324 |
| NsiI | ATGCAT | 3 cut(s) | 904, 1051, 1156 |
| NspV | TTCGAA | 1 cut(s) | 1025 |
| PciSI | GCTCTTC | 3 cut(s) | 363, 536, 599 |
| PcsI | WCGNNNNNNNCGW | 4 cut(s) | 198, 264, 510, 519 |
| PfeI | GAWTC | 2 cut(s) | 652, 1198 |
| PflFI | GACNNNGTC | 1 cut(s) | 257 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 211 |
| PkrI | GCNGC | 4 cut(s) | 200, 738, 838, 1261 |
| PleI | GAGTC | 4 cut(s) | 242, 307, 415, 422 |
| PpsI | GAGTC | 4 cut(s) | 242, 307, 415, 422 |
| PpuMI | RGGWCCY | 1 cut(s) | 9 |
| PshBI | ATTAAT | 1 cut(s) | 993 |
| PsiI | TTATAA | 1 cut(s) | 1002 |
| Psp124BI | GAGCTC | 3 cut(s) | 375, 531, 544 |
| Psp5II | RGGWCCY | 1 cut(s) | 9 |
| Psp6I | CCWGG | 2 cut(s) | 462, 516 |
| PspGI | CCWGG | 2 cut(s) | 462, 516 |
| PspN4I | GGNNCC | 3 cut(s) | 144, 323, 349 |
| PspOMI | GGGCCC | 1 cut(s) | 321 |
| PspPI | GGNCC | 5 cut(s) | 9, 142, 321, 322, 347 |
| PspPPI | RGGWCCY | 1 cut(s) | 9 |
| PsyI | GACNNNGTC | 1 cut(s) | 257 |
| PvuII | CAGCTG | 1 cut(s) | 739 |
| RsaI | GTAC | 2 cut(s) | 494, 1402 |
| RsaNI | GTAC | 2 cut(s) | 493, 1401 |
| SacI | GAGCTC | 3 cut(s) | 375, 531, 544 |
| SalI | GTCGAC | 1 cut(s) | 245 |
| SapI | GCTCTTC | 3 cut(s) | 363, 536, 599 |
| SaqAI | TTAA | 6 cut(s) | 452, 555, 771, 897, 993, 1119 |
| SatI | GCNGC | 4 cut(s) | 199, 737, 837, 1260 |
| Sau3AI | GATC | 4 cut(s) | 510, 663, 793, 1357 |
| Sau96I | GGNCC | 5 cut(s) | 9, 142, 321, 322, 347 |
| SchI | GAGTC | 4 cut(s) | 242, 308, 416, 422 |
| ScrFI | CCNGG | 3 cut(s) | 464, 518, 1098 |
| SduI | GDGCHC | 5 cut(s) | 325, 375, 531, 544, 1086 |
| SfaNI | GCATC | 4 cut(s) | 246, 1036, 1141, 1287 |
| SfuI | TTCGAA | 1 cut(s) | 1025 |
| SinI | GGWCC | 1 cut(s) | 9 |
| Sse9I | AATT | 4 cut(s) | 316, 1264, 1371, 1379 |
| SstI | GAGCTC | 3 cut(s) | 375, 531, 544 |
| StyD4I | CCNGG | 3 cut(s) | 462, 516, 1096 |
| StyI | CCWWGG | 1 cut(s) | 636 |
| TaaI | ACNGT | 3 cut(s) | 449, 875, 1311 |
| TaiI | ACGT | 2 cut(s) | 686, 1240 |
| TaqI | TCGA | 7 cut(s) | 246, 360, 426, 513, 538, 784, 1025 |
| TasI | AATT | 4 cut(s) | 316, 1264, 1371, 1379 |
| TauI | GCSGC | 1 cut(s) | 201 |
| TfiI | GAWTC | 2 cut(s) | 652, 1198 |
| Tru1I | TTAA | 6 cut(s) | 452, 555, 771, 897, 993, 1119 |
| Tru9I | TTAA | 6 cut(s) | 452, 555, 771, 897, 993, 1119 |
| TseFI | GTSAC | 1 cut(s) | 1324 |
| TseI | GCWGC | 3 cut(s) | 736, 836, 1259 |
| Tsp45I | GTSAC | 1 cut(s) | 1324 |
| TspDTI | ATGAA | 5 cut(s) | 199, 449, 469, 740, 1190 |
| TspGWI | ACGGA | 2 cut(s) | 232, 1343 |
| Tth111I | GACNNNGTC | 1 cut(s) | 257 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 211 |
| VpaK11BI | GGWCC | 1 cut(s) | 9 |
| VspI | ATTAAT | 1 cut(s) | 993 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 640 |
| XmiI | GTMKAC | 1 cut(s) | 246 |
| Zsp2I | ATGCAT | 3 cut(s) | 904, 1051, 1156 |