Rh7CG436000

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Reverse (-)
57043849 .. 57047789
3941 bp
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UTR
Exon/CDS
Intron
Rh7CG436000.1

Sequence Viewer

Length: 228 bp
ATGGTAGTTAATCAAAGAAGAAATGGTATGGATAGGAACCTACCGGAGTATGGAAAGGAGGAGAGAAGAAAGAATCATCCATTCAGCCGATCAGGCCAAAAGGTTTGGGAAGACAGAGAGTTGATTAATAGATCTGGTGGCAAAGAGCCGTATGCTCCGAAAAAAACCATGAGTCACTTGGTGACTGTTACTAAAAGCACAAGCTTTGTGTATGACTCTGAGGCCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

75

Amino Acids

8.76

Weight (kDa)

9.81

Isoelectric Point (pI)

67.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AdeI CACNNNGTG 1 cut(s) 181
AfiI CCNNNNNNNGG 1 cut(s) 50
AluBI AGCT 1 cut(s) 204
AluI AGCT 1 cut(s) 204
AoxI GGCC 2 cut(s) 94, 222
AseI ATTAAT 1 cut(s) 126
AsuHPI GGTGA 1 cut(s) 193
BbsI GAAGAC 1 cut(s) 117
BceAI ACGGC 1 cut(s) 133
BglI GCCNNNNNGGC 1 cut(s) 93
BglII AGATCT 1 cut(s) 131
BmiI GGNNCC 1 cut(s) 38
BpiI GAAGAC 1 cut(s) 117
BsaWI WCCGGW 1 cut(s) 43
Bsc4I CCNNNNNNNGG 1 cut(s) 50
BseGI GGATG 1 cut(s) 76
BseLI CCNNNNNNNGG 1 cut(s) 50
BseMII CTCAG 1 cut(s) 210
BseRI GAGGAG 1 cut(s) 74
BshFI GGCC 2 cut(s) 96, 224
BsiSI CCGG 1 cut(s) 44
BslI CCNNNNNNNGG 1 cut(s) 50
BsnI GGCC 2 cut(s) 96, 224
Bsp143I GATC 2 cut(s) 89, 131
BspANI GGCC 2 cut(s) 96, 224
BspCNI CTCAG 1 cut(s) 211
BspLI GGNNCC 1 cut(s) 38
BssMI GATC 2 cut(s) 89, 131
Bst4CI ACNGT 1 cut(s) 187
BstDEI CTNAG 1 cut(s) 219
BstF5I GGATG 1 cut(s) 76
BstKTI GATC 2 cut(s) 92, 134
BstMBI GATC 2 cut(s) 89, 131
BstMWI GCNNNNNNNGC 1 cut(s) 93
BstV2I GAAGAC 1 cut(s) 117
BstX2I RGATCY 1 cut(s) 131
BstYI RGATCY 1 cut(s) 131
BsuRI GGCC 2 cut(s) 96, 224
BtsCI GGATG 1 cut(s) 76
CviAII CATG 1 cut(s) 169
CviJI RGCY 5 cut(s) 87, 96, 148, 204, 224
CviKI_1 RGCY 5 cut(s) 87, 96, 148, 204, 224
DdeI CTNAG 1 cut(s) 219
DpnI GATC 2 cut(s) 91, 133
DpnII GATC 2 cut(s) 89, 131
DraIII CACNNNGTG 1 cut(s) 181
Eco147I AGGCCT 1 cut(s) 224
FaeI CATG 1 cut(s) 172
FaiI YATR 5 cut(s) 29, 51, 153, 170, 213
FatI CATG 1 cut(s) 168
FokI GGATG 1 cut(s) 63
HaeIII GGCC 2 cut(s) 96, 224
HapII CCGG 1 cut(s) 44
Hin1II CATG 1 cut(s) 172
HindIII AAGCTT 1 cut(s) 202
HinfI GANTC 3 cut(s) 73, 172, 215
HpaII CCGG 1 cut(s) 44
HphI GGTGA 1 cut(s) 193
Hpy188I TCNGA 2 cut(s) 159, 220
HpyCH4III ACNGT 1 cut(s) 187
HpyF10VI GCNNNNNNNGC 1 cut(s) 93
HpyF3I CTNAG 1 cut(s) 219
Hsp92II CATG 1 cut(s) 172
Kzo9I GATC 2 cut(s) 89, 131
LmnI GCTCC 1 cut(s) 160
LpnPI CCDG 3 cut(s) 57, 78, 120
MaeIII GTNAC 3 cut(s) 173, 181, 187
MalI GATC 2 cut(s) 91, 133
MboI GATC 2 cut(s) 89, 131
MboII GAAGA 3 cut(s) 30, 78, 122
MflI RGATCY 1 cut(s) 131
MlyI GAGTC 2 cut(s) 181, 209
MnlI CCTC 2 cut(s) 52, 214
MseI TTAA 2 cut(s) 9, 126
MspI CCGG 1 cut(s) 44
MwoI GCNNNNNNNGC 1 cut(s) 93
NdeII GATC 2 cut(s) 89, 131
NlaIII CATG 1 cut(s) 172
NlaIV GGNNCC 1 cut(s) 38
NmuCI GTSAC 2 cut(s) 173, 181
PceI AGGCCT 1 cut(s) 224
PfeI GAWTC 1 cut(s) 73
PleI GAGTC 2 cut(s) 180, 209
PpsI GAGTC 2 cut(s) 180, 209
PshBI ATTAAT 1 cut(s) 126
PspN4I GGNNCC 1 cut(s) 38
PsuI RGATCY 1 cut(s) 131
SaqAI TTAA 2 cut(s) 9, 126
Sau3AI GATC 2 cut(s) 89, 131
SchI GAGTC 2 cut(s) 181, 209
SetI ASST 3 cut(s) 42, 105, 206
SgeI CNNG 6 cut(s) 56, 105, 147, 181, 190, 213
SseBI AGGCCT 1 cut(s) 224
StuI AGGCCT 1 cut(s) 224
TaaI ACNGT 1 cut(s) 187
TfiI GAWTC 1 cut(s) 73
Tru1I TTAA 2 cut(s) 9, 126
Tru9I TTAA 2 cut(s) 9, 126
TseFI GTSAC 2 cut(s) 173, 181
Tsp45I GTSAC 2 cut(s) 173, 181
VspI ATTAAT 1 cut(s) 126
XcmI CCANNNNNNNNNTGG 1 cut(s) 175
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.